Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
TRAPPC9_chr8_139722725_140462744	139947894	G G	GTGTGTGT others(25): Show GTGTGTGTATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	NA18906.hp1 NA18906.hp1	a0002 a0002	a0002c0010 a0002c0010	a0002c0010t0002 a0002c0010t0002	a0002c0010t0002g0002 a0002c0010t0002g0002	1	98	0.0102	32	c.281 others(53): Show c.2811-37595_2811-37594insTATATATATATATATATATATATA TACACACA	TRAPPC9	ENSG00000167632.18	transcript	ENST00000438773.4	protein_coding	19/22			chr8	TogoVar
TRAPPC9_chr8_139722725_140462744	139947907	T T	TATATATA others(25): Show TATATATATATATATATAGAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG01109.hp1 HG00639.hp1 HG01109.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0009 a0001c0002t0002 a0001c0001t0009 a0001c0002t0002	a0001c0001t0009g0072 a0001c0002t0002g0028 a0001c0001t0009g0072 a0001c0002t0002g0028	2	98	0.0204	32	c.281 others(53): Show c.2811-37608_2811-37607insCTCTCTCTCTCTCTCTATATATAT ATATATAT	TRAPPC9	ENSG00000167632.18	transcript	ENST00000438773.4	protein_coding	19/22			chr8	TogoVar
TRAPPC9_chr8_139722725_140462744	139947907	T T	TATATATA others(25): Show TATATATATATATATATATAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00140.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0060 a0001c0001t0001g0060	1	98	0.0102	32	c.281 others(53): Show c.2811-37608_2811-37607insCTCTCTCTCTCTCTATATATATAT ATATATAT	TRAPPC9	ENSG00000167632.18	transcript	ENST00000438773.4	protein_coding	19/22			chr8	TogoVar
TRAPPC9_chr8_139722725_140462744	139947907	T T	TATATATA others(25): Show TATATATATATATATATATATATAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG01192.hp1 HG01192.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0054 a0001c0001t0001g0054	1	98	0.0102	32	c.281 others(53): Show c.2811-37608_2811-37607insCTCTCTCTCTATATATATATATAT ATATATAT	TRAPPC9	ENSG00000167632.18	transcript	ENST00000438773.4	protein_coding	19/22			chr8	TogoVar
TRDN_chr6_123211339_123641950	123265694	A A	ATATTAAT others(25): Show ATATTAATATTAATTTATACTAATAATATTAAT	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG00423.hp1 HG00621.hp1 others(49): Show HG00323.hp2 HG00423.hp1 HG00621.hp1 HG00642.hp2 HG01081.hp1 HG01106.hp2 HG01109.hp2 HG01123.hp1 HG01255.hp2 HG01496.hp2 HG01981.hp1 HG02055.hp2 HG02056.hp2 HG02135.hp1 HG02257.hp1 HG02293.hp1 HG02451.hp1 HG02523.hp2 HG02572.hp1 HG02647.hp1 HG02717.hp2 HG02895.hp1 HG02896.hp2 HG02897.hp2 HG02922.hp1 HG02970.hp2 HG03130.hp1 HG03139.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03516.hp1 HG03579.hp1 HG03579.hp2 HG03654.hp2 HG03669.hp1 HG03942.hp2 HG04184.hp2 NA18747.hp1 NA18906.hp1 NA18906.hp2 NA18944.hp1 NA18955.hp2 NA18962.hp2 NA18989.hp2 NA18995.hp2 NA18998.hp2 NA18999.hp2 NA19030.hp1 NA19043.hp2 NA19084.hp1 NA20129.hp2	a0001 a0002 a0003 others(8): Show a0001 a0002 a0003 a0004 a0007 a0009 a0011 a0012 a0022 a0029 a0030	a0001c0001 a0001c0002 a0002c0005 others(10): Show a0001c0001 a0001c0002 a0002c0005 a0003c0003 a0004c0007 a0007c0008 a0009c0011 a0011c0017 a0011c0035 a0012c0013 a0022c0033 a0029c0023 a0030c0021	a0001c0001t0001 a0001c0001t0003 a0001c0001t0009 others(23): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0009 a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0001c0002t0004 a0002c0005t0001 a0002c0005t0003 a0003c0003t0002 a0003c0003t0004 a0003c0003t0009 a0003c0003t0012 a0003c0003t0014 a0004c0007t0008 a0007c0008t0002 a0007c0008t0004 a0007c0008t0006 a0007c0008t0010 a0009c0011t0012 a0011c0017t0002 a0011c0035t0002 a0012c0013t0003 a0022c0033t0002 a0029c0023t0003 a0030c0021t0011	a0001c0001t0001g0075 a0001c0001t0003g0047 a0001c0001t0009g0136 others(49): Show a0001c0001t0001g0075 a0001c0001t0003g0047 a0001c0001t0009g0136 a0001c0002t0001g0030 a0001c0002t0001g0052 a0001c0002t0001g0054 a0001c0002t0001g0071 a0001c0002t0001g0110 a0001c0002t0002g0038 a0001c0002t0002g0121 a0001c0002t0003g0042 a0001c0002t0003g0044 a0001c0002t0003g0049 a0001c0002t0003g0062 a0001c0002t0003g0065 a0001c0002t0003g0080 a0001c0002t0003g0081 a0001c0002t0003g0087 a0001c0002t0003g0088 a0001c0002t0003g0102 a0001c0002t0003g0120 a0001c0002t0003g0132 a0001c0002t0004g0011 a0002c0005t0001g0063 a0002c0005t0003g0057 a0002c0005t0003g0059 a0002c0005t0003g0068 a0002c0005t0003g0127 a0003c0003t0002g0006 a0003c0003t0002g0008 a0003c0003t0004g0021 a0003c0003t0004g0099 a0003c0003t0004g0134 a0003c0003t0009g0005 a0003c0003t0009g0007 a0003c0003t0012g0133 a0003c0003t0014g0142 a0003c0003t0014g0143 a0004c0007t0008g0152 a0007c0008t0002g0013 a0007c0008t0002g0137 a0007c0008t0004g0023 a0007c0008t0004g0097 a0007c0008t0006g0010 a0007c0008t0010g0148 a0009c0011t0012g0098 a0011c0017t0002g0116 a0011c0035t0002g0012 a0012c0013t0003g0027 a0022c0033t0002g0135 a0029c0023t0003g0039 a0030c0021t0011g0024	52	152	0.3421	32	c.178 others(49): Show c.1784-388_1784-357dupATTAATATTATTAGTATAAATTAATATT AATA	TRDN	ENSG00000186439.15	transcript	ENST00000334268.9	protein_coding	32/40			chr6	TogoVar
TRDN_chr6_123211339_123641950	123266453	G G	GATATGTA others(25): Show GATATGTATTATATATAATATATATATTATAAT	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG03704.hp1 HG00639.hp2 HG03704.hp1	a0002 a0002	a0002c0005 a0002c0005	a0002c0005t0002 a0002c0005t0002	a0002c0005t0002g0113 a0002c0005t0002g0118 a0002c0005t0002g0113 a0002c0005t0002g0118	2	152	0.0132	32	c.178 others(51): Show c.1784-1147_1784-1116dupATTATAATATATATATTATATATAAT ACATAT	TRDN	ENSG00000186439.15	transcript	ENST00000334268.9	protein_coding	32/40			chr6	TogoVar
TRDN_chr6_123211339_123641950	123283985	C C	CATATATA others(25): Show CATATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02135.hp2 HG02257.hp2 HG02258.hp1 others(7): Show HG02135.hp2 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02895.hp1 HG02896.hp2 HG02897.hp2 HG02922.hp2 HG03704.hp2 NA19030.hp1	a0002 a0003 a0007 others(3): Show a0002 a0003 a0007 a0009 a0011 a0024	a0002c0004 a0002c0005 a0003c0003 others(4): Show a0002c0004 a0002c0005 a0003c0003 a0007c0008 a0009c0011 a0011c0017 a0024c0032	a0002c0004t0001 a0002c0005t0002 a0003c0003t0014 others(6): Show a0002c0004t0001 a0002c0005t0002 a0003c0003t0014 a0003c0003t0015 a0007c0008t0002 a0007c0008t0010 a0009c0011t0001 a0011c0017t0002 a0024c0032t0011	a0002c0004t0001g0060 a0002c0005t0002g0056 a0003c0003t0014g0142 others(7): Show a0002c0004t0001g0060 a0002c0005t0002g0056 a0003c0003t0014g0142 a0003c0003t0014g0143 a0003c0003t0015g0019 a0007c0008t0002g0137 a0007c0008t0010g0148 a0009c0011t0001g0031 a0011c0017t0002g0028 a0024c0032t0011g0100	10	152	0.0658	32	c.151 others(51): Show c.1511-4904_1511-4903insATATATATATATATATATATATATAT ATATAT	TRDN	ENSG00000186439.15	transcript	ENST00000334268.9	protein_coding	24/40			chr6	TogoVar
TRDN_chr6_123211339_123641950	123301741	G G	GTATATAT others(25): Show GTATATATATACATATATATATATATACATATA	intron_variant intron_variant	MODIFIER	HG02723.hp2 HG02723.hp2	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0004 a0002c0004t0004	a0002c0004t0004g0107 a0002c0004t0004g0107	1	152	0.0066	32	c.151 others(53): Show c.1510+14715_1510+14716insTATATGTATATATATATATATGTA TATATATA	TRDN	ENSG00000186439.15	transcript	ENST00000334268.9	protein_coding	24/40			chr6	TogoVar
TRDN_chr6_123211339_123641950	123491132	A A	AGAAGGAA others(25): Show AGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAG	intron_variant intron_variant	MODIFIER	HG01981.hp2 HG02280.hp1 HG02622.hp2 others(3): Show HG01981.hp2 HG02280.hp1 HG02622.hp2 HG02735.hp1 HG03209.hp2 HG03516.hp1	a0001 a0002 a0004 others(2): Show a0001 a0002 a0004 a0009 a0010	a0001c0001 a0002c0004 a0004c0007 others(2): Show a0001c0001 a0002c0004 a0004c0007 a0009c0011 a0010c0012	a0001c0001t0001 a0001c0001t0018 a0002c0004t0006 others(3): Show a0001c0001t0001 a0001c0001t0018 a0002c0004t0006 a0004c0007t0008 a0009c0011t0012 a0010c0012t0001	a0001c0001t0001g0001 a0001c0001t0018g0029 a0002c0004t0006g0016 others(3): Show a0001c0001t0001g0001 a0001c0001t0018g0029 a0002c0004t0006g0016 a0004c0007t0008g0152 a0009c0011t0012g0098 a0010c0012t0001g0119	6	152	0.0395	32	c.853 others(49): Show c.853+6060_853+6061insCTTCCTTCCTTCCTTCCTTCCTTCCTTC CTTC	TRDN	ENSG00000186439.15	transcript	ENST00000334268.9	protein_coding	9/40			chr6	TogoVar
TRDN_chr6_123211339_123641950	123499719	A A	AAAAAAAA others(25): Show AAAAAAAAAAAAAAAAAATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG00639.hp1	a0013 a0013	a0013c0016 a0013c0016	a0013c0016t0002 a0013c0016t0002	a0013c0016t0002g0053 a0013c0016t0002g0053	1	152	0.0066	32	c.794 others(49): Show c.794-2468_794-2467insATATATATATATATATTTTTTTTTTTTT TTTT	TRDN	ENSG00000186439.15	transcript	ENST00000334268.9	protein_coding	8/40			chr6	TogoVar
TRDN_chr6_123211339_123641950	123499719	A A	AAAAAAAA others(25): Show AAAAAAAAAAAAAAAATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG01081.hp2 HG01952.hp1 others(1): Show HG00423.hp2 HG01081.hp2 HG01952.hp1 HG01981.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0007 a0001c0001t0001 a0001c0001t0003 a0001c0001t0007	a0001c0001t0001g0075 a0001c0001t0003g0036 a0001c0001t0007g0064 others(1): Show a0001c0001t0001g0075 a0001c0001t0003g0036 a0001c0001t0007g0064 a0001c0001t0007g0072	4	152	0.0263	32	c.794 others(49): Show c.794-2468_794-2467insATATATATATATATATATTTTTTTTTTT TTTT	TRDN	ENSG00000186439.15	transcript	ENST00000334268.9	protein_coding	8/40			chr6	TogoVar
TRDN_chr6_123211339_123641950	123499719	A A	AAAAAAAA others(25): Show AAAAAAAAAAAAAATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01255.hp1 HG03209.hp1 HG04228.hp2 HG01255.hp1 HG03209.hp1 HG04228.hp2	a0001 a0002 a0011 a0001 a0002 a0011	a0001c0001 a0002c0004 a0011c0017 a0001c0001 a0002c0004 a0011c0017	a0001c0001t0007 a0002c0004t0001 a0011c0017t0002 a0001c0001t0007 a0002c0004t0001 a0011c0017t0002	a0001c0001t0007g0070 a0002c0004t0001g0055 a0011c0017t0002g0116 a0001c0001t0007g0070 a0002c0004t0001g0055 a0011c0017t0002g0116	3	152	0.0197	32	c.794 others(49): Show c.794-2468_794-2467insATATATATATATATATATATTTTTTTTT TTTT	TRDN	ENSG00000186439.15	transcript	ENST00000334268.9	protein_coding	8/40			chr6	TogoVar
TRDN_chr6_123211339_123641950	123551203	G G	GATATATA others(25): Show GATATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02717.hp2 HG02896.hp1 HG02717.hp2 HG02896.hp1	a0002 a0003 a0002 a0003	a0002c0004 a0003c0003 a0002c0004 a0003c0003	a0002c0004t0002 a0003c0003t0004 a0002c0004t0002 a0003c0003t0004	a0002c0004t0002g0050 a0003c0003t0004g0021 a0002c0004t0002g0050 a0003c0003t0004g0021	2	152	0.0132	32	c.233 others(49): Show c.233-2592_233-2591insATATATATATATATATATATATATATAT ATAT	TRDN	ENSG00000186439.15	transcript	ENST00000334268.9	protein_coding	2/40			chr6	TogoVar
TREM2_chr6_41153508_41168116	41155375	T T	TTCTCTCT others(25): Show TTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18995.hp1 NA18995.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	324	0.0031	32	c.33 others(43): Show c.3388_*3389insGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	TREM2	ENSG00000095970.17	transcript	ENST00000373113.8	protein_coding		3132		chr6	TogoVar
TRERF1_chr6_42219931_42456926	42277903	A A	AAGAGGAA others(25): Show AAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAG	intron_variant intron_variant	MODIFIER	NA19074.hp1 NA19074.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0013 a0001c0001t0001g0013	1	180	0.0056	32	c.-25 others(51): Show c.-258-8056_-258-8055insCTTCCTCTTCCTCTTCCTCTTCCTCT TCCTCT	TRERF1	ENSG00000124496.13	transcript	ENST00000695948.1	protein_coding	4/17			chr6	TogoVar
TRERF1_chr6_42219931_42456926	42299116	C C	CTGTCTGT others(25): Show CTGTCTGTCTGTATCTATCTATCTATCTATCTA	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG02717.hp1 HG02717.hp2 others(1): Show HG01243.hp1 HG02717.hp1 HG02717.hp2 NA18906.hp2	a0001 a0002 a0007 a0001 a0002 a0007	a0001c0001 a0002c0035 a0007c0038 a0001c0001 a0002c0035 a0007c0038	a0001c0001t0001 a0001c0001t0032 a0002c0035t0035 others(1): Show a0001c0001t0001 a0001c0001t0032 a0002c0035t0035 a0007c0038t0034	a0001c0001t0001g0031 a0001c0001t0032g0166 a0002c0035t0035g0139 others(1): Show a0001c0001t0001g0031 a0001c0001t0032g0166 a0002c0035t0035g0139 a0007c0038t0034g0180	4	180	0.0222	32	c.-25 others(51): Show c.-259+1521_-259+1522insTAGATAGATAGATAGATAGATACAGA CAGACA	TRERF1	ENSG00000124496.13	transcript	ENST00000695948.1	protein_coding	4/17			chr6	TogoVar
TRERF1_chr6_42219931_42456926	42299116	C C	CTGTCTGT others(25): Show CTGTCTGTCTGTCTGTATCTATCTATCTATCTA	intron_variant intron_variant	MODIFIER	HG01255.hp1 NA19240.hp2 HG01255.hp1 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0001 a0001c0005t0006 a0001c0001t0001 a0001c0005t0006	a0001c0001t0001g0141 a0001c0005t0006g0048 a0001c0001t0001g0141 a0001c0005t0006g0048	2	180	0.0111	32	c.-25 others(51): Show c.-259+1521_-259+1522insTAGATAGATAGATAGATACAGACAGA CAGACA	TRERF1	ENSG00000124496.13	transcript	ENST00000695948.1	protein_coding	4/17			chr6	TogoVar
TRIM23_chr5_65584690_65629333	65591645	T T	TTATATAT others(25): Show TTATATATATATATATATATATATATATATATA	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG03195.hp1 HG03195.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0051 a0001c0001t0051	a0001c0001t0051g0187 a0001c0001t0051g0187	1	372	0.0027	32	c.12 others(41): Show c.123_*124insTATATATATATATATATATATATATATATATA	TRIM23	ENSG00000113595.15	transcript	ENST00000231524.14	protein_coding	11/11	123		chr5	TogoVar
TRIM24_chr7_138455259_138594996	138568379	C C	CTTTTTTT others(25): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01258.hp2 HG01258.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0009	a0001c0001t0009g0027 a0001c0001t0009g0027	1	312	0.0032	32	c.170 others(49): Show c.1704+755_1704+756insTTTTTTTTTTTTTTTTTTTTTTTTTTTT TTTT	TRIM24	ENSG00000122779.18	transcript	ENST00000343526.9	protein_coding	10/18		INFO_REALIGN_3_PRIME	chr7	TogoVar
TRIM26_chr6_30179455_30218406	30193182	A A	ATATATAT others(25): Show ATATATATATATATATATATATATATATATTTT	intron_variant intron_variant	MODIFIER	HG02647.hp2 HG02647.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0001 a0001c0005t0001	a0001c0005t0001g0314 a0001c0005t0001g0314	1	441	0.0023	32	c.766 others(49): Show c.766-3148_766-3147insAAAATATATATATATATATATATATATA TATA	TRIM26	ENSG00000234127.9	transcript	ENST00000454678.7	protein_coding	6/9			chr6	TogoVar
TRIM2_chr4_153199443_153344317	153273270	C C	CTTTTTTT others(25): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02280.hp2 HG03209.hp1 HG02280.hp2 HG03209.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0009	a0001c0001t0009g0263 a0001c0001t0009g0264 a0001c0001t0009g0263 a0001c0001t0009g0264	2	268	0.0075	32	c.216 others(49): Show c.216-2600_216-2599insTTTTTTTTTTTTTTTTTTTTTTTTTTTT TTTT	TRIM2	ENSG00000109654.16	transcript	ENST00000338700.10	protein_coding	2/11		INFO_REALIGN_3_PRIME	chr4	TogoVar
TRIM31_chr6_30097897_30118090	30099075	A A	AAAAGAAA others(25): Show AAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01258.hp2 HG01361.hp2 NA19077.hp1 others(1): Show HG01258.hp2 HG01361.hp2 NA19077.hp1 NA19084.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0002t0002 a0001c0001t0001 a0001c0001t0002 a0001c0002t0002	a0001c0001t0001g0003 a0001c0001t0002g0050 a0001c0002t0002g0001 others(1): Show a0001c0001t0001g0003 a0001c0001t0002g0050 a0001c0002t0002g0001 a0001c0002t0002g0086	4	445	0.0090	32	c.44 others(43): Show c.4460_*4461insCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	TRIM31	ENSG00000204616.11	transcript	ENST00000376734.4	protein_coding		3821		chr6	TogoVar
TRIM33_chr1_114387790_114516203	114387960	A A	ATATATAT others(25): Show ATATATATATATATATATATATATTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03098.hp1 HG03098.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0030 a0001c0001t0030	a0001c0001t0030g0156 a0001c0001t0030g0156	1	208	0.0048	32	c.96 others(43): Show c.9687_*9688insAAAAAAAAAATATATATATATATATATATATA	TRIM33	ENSG00000197323.12	transcript	ENST00000358465.7	protein_coding		4829		chr1	TogoVar
TRIM33_chr1_114387790_114516203	114387960	A A	ATATATAT others(25): Show ATATATATATATATATATATATTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02451.hp2 HG02451.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0033 a0001c0002t0033	a0001c0002t0033g0117 a0001c0002t0033g0117	1	208	0.0048	32	c.96 others(43): Show c.9687_*9688insAAAAAAAAAAAATATATATATATATATATATA	TRIM33	ENSG00000197323.12	transcript	ENST00000358465.7	protein_coding		4829		chr1	TogoVar
TRIM37_chr17_58993202_59111880	59056716	C C	CAAAAAAA others(25): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00733.hp2 HG00733.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0040 a0001c0001t0003g0040	1	342	0.0029	32	c.119 others(49): Show c.1199+158_1199+159insTTTTTTTTTTTTTTTTTTTTTTTTTTTT TTTT	TRIM37	ENSG00000108395.14	transcript	ENST00000262294.12	protein_coding	13/23			chr17	TogoVar
TRIM42_chr3_140673064_140706150	140692530	T T	TACACACA others(25): Show TACACACACACACACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	NA18967.hp2 NA18967.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0239 a0002c0002t0001g0239	1	410	0.0024	32	c.208 others(51): Show c.2085+1340_2085+1371dupCACACACACACACACACACACACACA CACACA	TRIM42	ENSG00000155890.4	transcript	ENST00000286349.4	protein_coding	4/4		INFO_REALIGN_3_PRIME	chr3	TogoVar
TRIM44_chr11_35657775_35823007	35792111	A A	ACACACAC others(25): Show ACACACACACACACACACACACACACACACACT	intron_variant intron_variant	MODIFIER	NA18959.hp2 NA18959.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0054 a0001c0001t0004g0054	1	392	0.0026	32	c.100 others(53): Show c.1008-14246_1008-14245insACACACACACACACACACACACAC ACACACTC	TRIM44	ENSG00000166326.7	transcript	ENST00000299413.7	protein_coding	4/4		INFO_REALIGN_3_PRIME	chr11	TogoVar
TRIM44_chr11_35657775_35823007	35792111	A A	ACACACAC others(25): Show ACACACACACACACACACACACACACACACTCT	intron_variant intron_variant	MODIFIER	HG02040.hp1 NA18948.hp2 HG02040.hp1 NA18948.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0052 a0001c0001t0007 a0001c0001t0052	a0001c0001t0007g0202 a0001c0001t0052g0055 a0001c0001t0007g0202 a0001c0001t0052g0055	2	392	0.0051	32	c.100 others(53): Show c.1008-14246_1008-14245insACACACACACACACACACACACAC ACACTCTC	TRIM44	ENSG00000166326.7	transcript	ENST00000299413.7	protein_coding	4/4		INFO_REALIGN_3_PRIME	chr11	TogoVar
TRIM51_chr11_55878297_55896810	55884157	C C	CTATAACT others(25): Show CTATAACTATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG03098.hp2 HG03098.hp2	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0001 a0004c0004t0001	a0004c0004t0001g0091 a0004c0004t0001g0091	1	436	0.0023	32	c.-5+ others(45): Show c.-5+777_-5+778insACTATATATATATATATATATATATATATATA	TRIM51	ENSG00000124900.12	transcript	ENST00000449290.6	protein_coding	1/6		INFO_REALIGN_3_PRIME	chr11	TogoVar
TRIM51_chr11_55878297_55896810	55884157	C C	CTATATAT others(25): Show CTATATATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02300.hp1 HG03486.hp2 HG03669.hp1 others(6): Show HG02300.hp1 HG03486.hp2 HG03669.hp1 NA18944.hp2 NA18959.hp2 NA18960.hp2 NA18963.hp1 NA18975.hp2 NA18981.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0002c0002 a0003c0003 a0001c0001 a0002c0002 a0003c0003	a0001c0001t0001 a0002c0002t0001 a0003c0003t0001 a0001c0001t0001 a0002c0002t0001 a0003c0003t0001	a0001c0001t0001g0068 a0001c0001t0001g0150 a0002c0002t0001g0027 others(1): Show a0001c0001t0001g0068 a0001c0001t0001g0150 a0002c0002t0001g0027 a0003c0003t0001g0151	9	436	0.0206	32	c.-5+ others(45): Show c.-5+799_-5+800insTATATATATATATATATATATATATATATATA	TRIM51	ENSG00000124900.12	transcript	ENST00000449290.6	protein_coding	1/6		INFO_REALIGN_3_PRIME	chr11	TogoVar
TRIM51_chr11_55878297_55896810	55884182	T T	TATATATA others(25): Show TATATATATATATATATATATATATATACACAC	intron_variant intron_variant	MODIFIER	HG03942.hp2 HG03942.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0168 a0002c0002t0002g0168	1	436	0.0023	32	c.-5+ others(45): Show c.-5+799_-5+800insTATATATATATATATATATATATATACACACA	TRIM51	ENSG00000124900.12	transcript	ENST00000449290.6	protein_coding	1/6		INFO_REALIGN_3_PRIME	chr11	TogoVar
TRIM51_chr11_55878297_55896810	55884182	T T	TATATATA others(25): Show TATATATATATATATATATATATATATATACAC	intron_variant intron_variant	MODIFIER	NA19080.hp1 NA19091.hp2 NA19080.hp1 NA19091.hp2	a0002 a0008 a0002 a0008	a0002c0002 a0008c0008 a0002c0002 a0008c0008	a0002c0002t0002 a0008c0008t0002 a0002c0002t0002 a0008c0008t0002	a0002c0002t0002g0074 a0008c0008t0002g0074 a0002c0002t0002g0074 a0008c0008t0002g0074	2	436	0.0046	32	c.-5+ others(45): Show c.-5+799_-5+800insTATATATATATATATATATATATATATACACA	TRIM51	ENSG00000124900.12	transcript	ENST00000449290.6	protein_coding	1/6		INFO_REALIGN_3_PRIME	chr11	TogoVar
TRIM66_chr11_8607040_8687665	8622365	C C	CACACACA others(25): Show CACACACACACACACACATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA19066.hp1 NA19066.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0039 a0001c0001t0010g0039	1	390	0.0026	32	c.308 others(49): Show c.3080+450_3080+451insATATATATATATATATGTGTGTGTGTGT GTGT	TRIM66	ENSG00000166436.18	transcript	ENST00000646038.2	protein_coding	18/24			chr11	TogoVar
TRIM66_chr11_8607040_8687665	8622365	C C	CACACACA others(25): Show CACACACACACACACATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00621.hp2 HG02132.hp2 NA18981.hp1 others(1): Show HG00621.hp2 HG02132.hp2 NA18981.hp1 NA19086.hp1	a0001 a0009 a0001 a0009	a0001c0001 a0009c0009 a0001c0001 a0009c0009	a0001c0001t0001 a0001c0001t0010 a0009c0009t0001 a0001c0001t0001 a0001c0001t0010 a0009c0009t0001	a0001c0001t0001g0289 a0001c0001t0010g0045 a0009c0009t0001g0021 others(1): Show a0001c0001t0001g0289 a0001c0001t0010g0045 a0009c0009t0001g0021 a0009c0009t0001g0132	4	390	0.0103	32	c.308 others(49): Show c.3080+450_3080+451insATATATATATATATATATGTGTGTGTGT GTGT	TRIM66	ENSG00000166436.18	transcript	ENST00000646038.2	protein_coding	18/24			chr11	TogoVar
TRIM66_chr11_8607040_8687665	8622365	C C	CACACACA others(25): Show CACACACACACACATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01496.hp2 HG01884.hp1 HG02055.hp1 others(1): Show HG01496.hp2 HG01884.hp1 HG02055.hp1 HG02257.hp1	a0001 a0010 a0001 a0010	a0001c0001 a0010c0010 a0001c0001 a0010c0010	a0001c0001t0001 a0010c0010t0001 a0001c0001t0001 a0010c0010t0001	a0001c0001t0001g0138 a0001c0001t0001g0224 a0001c0001t0001g0243 others(1): Show a0001c0001t0001g0138 a0001c0001t0001g0224 a0001c0001t0001g0243 a0010c0010t0001g0137	4	390	0.0103	32	c.308 others(49): Show c.3080+450_3080+451insATATATATATATATATATATGTGTGTGT GTGT	TRIM66	ENSG00000166436.18	transcript	ENST00000646038.2	protein_coding	18/24			chr11	TogoVar
TRIM66_chr11_8607040_8687665	8622365	C C	CACACACA others(25): Show CACACACACACATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02015.hp1 NA19080.hp1 HG02015.hp1 NA19080.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0122 a0001c0001t0001g0149 a0001c0001t0001g0122 a0001c0001t0001g0149	2	390	0.0051	32	c.308 others(49): Show c.3080+450_3080+451insATATATATATATATATATATATGTGTGT GTGT	TRIM66	ENSG00000166436.18	transcript	ENST00000646038.2	protein_coding	18/24			chr11	TogoVar
TRIM66_chr11_8607040_8687665	8622365	C C	CACACACA others(25): Show CACACACACATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02074.hp1 NA18954.hp2 HG02074.hp1 NA18954.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0099 a0001c0001t0001g0104 a0001c0001t0001g0099 a0001c0001t0001g0104	2	390	0.0051	32	c.308 others(49): Show c.3080+450_3080+451insATATATATATATATATATATATATGTGT GTGT	TRIM66	ENSG00000166436.18	transcript	ENST00000646038.2	protein_coding	18/24			chr11	TogoVar
TRIM66_chr11_8607040_8687665	8622365	C C	CACACACA others(25): Show CACACACATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18939.hp1 NA18939.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0299 a0001c0001t0001g0299	1	390	0.0026	32	c.308 others(49): Show c.3080+450_3080+451insATATATATATATATATATATATATATGT GTGT	TRIM66	ENSG00000166436.18	transcript	ENST00000646038.2	protein_coding	18/24			chr11	TogoVar
TRIM69_chr15_44731528_44772827	44768654	C C	CATATATA others(25): Show CATATATATATATATATATATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00741.hp1 HG01243.hp1 HG01934.hp1 others(10): Show HG00741.hp1 HG01243.hp1 HG01934.hp1 HG02027.hp2 HG02145.hp1 HG04115.hp2 NA18993.hp1 NA19001.hp2 NA19054.hp2 NA19055.hp1 NA20805.hp2 NA20905.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0007	a0001c0001 a0002c0002 a0003c0003 others(1): Show a0001c0001 a0002c0002 a0003c0003 a0007c0006	a0001c0001t0001 a0002c0002t0001 a0003c0003t0001 others(1): Show a0001c0001t0001 a0002c0002t0001 a0003c0003t0001 a0007c0006t0001	a0001c0001t0001g0005 a0001c0001t0001g0017 a0001c0001t0001g0108 others(10): Show a0001c0001t0001g0005 a0001c0001t0001g0017 a0001c0001t0001g0108 a0001c0001t0001g0117 a0001c0001t0001g0136 a0001c0001t0001g0140 a0001c0001t0001g0147 a0001c0001t0001g0155 a0002c0002t0001g0004 a0002c0002t0001g0018 a0002c0002t0001g0194 a0003c0003t0001g0053 a0007c0006t0001g0073	13	349	0.0373	32	c.88 others(41): Show c.882_*883insATATATATATATATATATATATATATATATAT	TRIM69	ENSG00000185880.13	transcript	ENST00000329464.9	protein_coding		828		chr15	TogoVar
TRIM71_chr3_32812997_32902824	32823708	G G	GCAGTGAG others(25): Show GCAGTGAGCCGAGGGTGCAGTGAGCCGAGGGTA	intron_variant intron_variant	MODIFIER	HG02155.hp2 HG02155.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0013 a0001c0002t0013	a0001c0002t0013g0258 a0001c0002t0013g0258	1	328	0.0031	32	c.852 others(49): Show c.852+4788_852+4789insGGTGCAGTGAGCCGAGGGTACAGTGAGC CGAG	TRIM71	ENSG00000206557.6	transcript	ENST00000383763.6	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr3	TogoVar
TRIOBP_chr22_37692048_37781556	37746044	C C	CCCCGCCG others(25): Show CCCCGCCGTCCCGCCGTCCCGCCGTCCCGCCGT	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG03098.hp2 HG03453.hp1 HG02258.hp2 HG03098.hp2 HG03453.hp1	a0005 a0055 a0005 a0055	a0005c0006 a0055c0061 a0005c0006 a0055c0061	a0005c0006t0005 a0055c0061t0005 a0005c0006t0005 a0055c0061t0005	a0005c0006t0005g0219 a0005c0006t0005g0233 a0055c0061t0005g0220 a0005c0006t0005g0219 a0005c0006t0005g0233 a0055c0061t0005g0220	3	322	0.0093	32	c.532 others(51): Show c.5322+5035_5322+5036insTCCCGCCGTCCCGCCGTCCCGCCGTC CCGCCG	TRIOBP	ENSG00000100106.22	transcript	ENST00000644935.1	protein_coding	11/23		INFO_REALIGN_3_PRIME	chr22	TogoVar
TRIP4_chr15_64382836_64460303	64431831	T T	TTATATAT others(25): Show TTATATATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02809.hp1 HG03453.hp1 HG02809.hp1 HG03453.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0215 a0001c0001t0002g0216 a0001c0001t0002g0215 a0001c0001t0002g0216	2	220	0.0091	32	c.157 others(51): Show c.1575+6217_1575+6218insATATATATATATATATATATATATAT ATATAT	TRIP4	ENSG00000103671.10	transcript	ENST00000261884.8	protein_coding	11/12		INFO_REALIGN_3_PRIME	chr15	TogoVar
TRIP4_chr15_64382836_64460303	64431847	A A	ATATATAT others(25): Show ATATATATATATATATATATATTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03130.hp2 HG03130.hp2	a0001 a0001	a0001c0008 a0001c0008	a0001c0008t0001 a0001c0008t0001	a0001c0008t0001g0047 a0001c0008t0001g0047	1	220	0.0046	32	c.157 others(51): Show c.1575+6217_1575+6218insATATATATATATATATATATTTTTTT TTTTTT	TRIP4	ENSG00000103671.10	transcript	ENST00000261884.8	protein_coding	11/12		INFO_REALIGN_3_PRIME	chr15	TogoVar
TRIT1_chr1_39833110_39888504	39835848	C C	CAGATAGA others(25): Show CAGATAGATAGATAGATAGATAGATAGATAGAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03098.hp1 HG03098.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0009 a0001c0002t0009	a0001c0002t0009g0157 a0001c0002t0009g0157	1	378	0.0027	32	c.58 others(43): Show c.5895_*5896insATCTATCTATCTATCTATCTATCTATCTATCT	TRIT1	ENSG00000043514.17	transcript	ENST00000316891.10	protein_coding		2261		chr1	TogoVar
TRMT10B_chr9_37748805_37783972	37752194	A A	ACCCCTAC others(25): Show ACCCCTACCCCCACCCCTACCCCCACCCCCCAC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03209.hp2 NA18522.hp2 NA19043.hp2 HG03209.hp2 NA18522.hp2 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0007 a0001c0001t0014 a0001c0001t0001 a0001c0001t0007 a0001c0001t0014	a0001c0001t0001g0327 a0001c0001t0007g0112 a0001c0001t0014g0340 a0001c0001t0001g0327 a0001c0001t0007g0112 a0001c0001t0014g0340	3	388	0.0077	32	c.-16 others(43): Show c.-1688_-1687insCCCCTACCCCCACCCCTACCCCCACCCCCCAC	TRMT10B	ENSG00000165275.10	transcript	ENST00000297994.4	protein_coding		1610		chr9	TogoVar
TRMT10B_chr9_37748805_37783972	37767513	C C	CAAAAAAA others(25): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02293.hp1 HG03834.hp2 HG02293.hp1 HG03834.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0124 a0001c0001t0001g0237 a0001c0001t0001g0124 a0001c0001t0001g0237	2	388	0.0052	32	c.421 others(47): Show c.421-541_421-540insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AA	TRMT10B	ENSG00000165275.10	transcript	ENST00000297994.4	protein_coding	4/8		INFO_REALIGN_3_PRIME	chr9	TogoVar
TRMT10B_chr9_37748805_37783972	37769305	C C	CTTTTTTT others(25): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA19086.hp2 NA19086.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0052 a0001c0001t0001g0052	1	388	0.0026	32	c.574 others(47): Show c.574-633_574-632insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT TT	TRMT10B	ENSG00000165275.10	transcript	ENST00000297994.4	protein_coding	5/8		INFO_REALIGN_3_PRIME	chr9	TogoVar
TRMT1_chr19_13099907_13121740	13109085	G G	GGTGTGTG others(25): Show GGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG03540.hp1 HG03540.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0196 a0001c0001t0001g0196	1	374	0.0027	32	c.139 others(49): Show c.1397+295_1397+296insACACACACACACACACACACACACACAC ACAC	TRMT1	ENSG00000104907.13	transcript	ENST00000357720.9	protein_coding	12/16			chr19	TogoVar
TRNP1_chr1_26988692_27005886	26989643	T T	TTTCCTTC others(25): Show TTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02723.hp2 HG02723.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0008 a0001c0001t0002g0008	1	288	0.0035	32	c.-41 others(43): Show c.-4144_-4143insTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC	TRNP1	ENSG00000253368.4	transcript	ENST00000522111.3	protein_coding		4048		chr1	TogoVar
TRNT1_chr3_3121940_3154023	3123292	T T	TTATATAT others(25): Show TTATATATATATATATATATATATATATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19090.hp2 NA19090.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0003	1	402	0.0025	32	c.-37 others(43): Show c.-3726_-3725insTATATATATATATATATATATATATATATATA	TRNT1	ENSG00000072756.18	transcript	ENST00000251607.11	protein_coding		3647		chr3	TogoVar

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