Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
CCNT2_chr2_134913822_134964342	134931262	C C	CTTTTTTT others(25): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00558.hp2 HG03669.hp1 NA19084.hp1 HG00558.hp2 HG03669.hp1 NA19084.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0137 a0001c0001t0001g0138 a0001c0001t0001g0140 a0001c0001t0001g0137 a0001c0001t0001g0138 a0001c0001t0001g0140	3	404	0.0074	32	c.241 others(49): Show c.241-5554_241-5553insTTTTTTTTTTTTTTTTTTTTTTTTTTTT TTTT	CCNT2	ENSG00000082258.13	transcript	ENST00000264157.10	protein_coding	2/8		INFO_REALIGN_3_PRIME	chr2	TogoVar
CCR3_chr3_46237460_46271706	46242976	T T	TACACATA others(25): Show TACACATATATATATATATATATATATATACAC	intron_variant intron_variant	MODIFIER	NA18906.hp2 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0079 a0001c0001t0001g0079	1	408	0.0025	32	c.-12 others(47): Show c.-12+439_-12+440insCACATATATATATATATATATATATATACA CA	CCR3	ENSG00000183625.16	transcript	ENST00000395940.3	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr3	TogoVar
CCR3_chr3_46237460_46271706	46242982	C C	CATATATA others(25): Show CATATATATATATATATATACACACATATATAT	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02451.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0132 a0001c0001t0001g0132	1	408	0.0025	32	c.-12 others(47): Show c.-12+463_-12+464insCACACATATATATATATATATATATATATA TA	CCR3	ENSG00000183625.16	transcript	ENST00000395940.3	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr3	TogoVar
CCR3_chr3_46237460_46271706	46243002	T T	TACACATA others(25): Show TACACATATATATATATATATATATATATACAC	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG00438.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0155 a0001c0001t0001g0155	1	408	0.0025	32	c.-12 others(47): Show c.-12+466_-12+467insACATATATATATATATATATATATATACAC AC	CCR3	ENSG00000183625.16	transcript	ENST00000395940.3	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr3	TogoVar
CCR3_chr3_46237460_46271706	46243002	T T	TATACACA others(25): Show TATACACATATATATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	HG00735.hp1 NA18949.hp1 NA19074.hp1 HG00735.hp1 NA18949.hp1 NA19074.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0054 a0001c0001t0001g0126 a0001c0001t0001g0054 a0001c0001t0001g0126	3	408	0.0074	32	c.-12 others(47): Show c.-12+465_-12+466insTACACATATATATATATATATATATATATA CA	CCR3	ENSG00000183625.16	transcript	ENST00000395940.3	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr3	TogoVar
CCR3_chr3_46237460_46271706	46243002	T T	TATATACA others(25): Show TATATACACATATATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	HG01069.hp1 HG01071.hp2 HG02165.hp2 others(2): Show HG01069.hp1 HG01071.hp2 HG02165.hp2 NA19087.hp1 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0228 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0228	5	408	0.0123	32	c.-12 others(47): Show c.-12+465_-12+466insTATACACATATATATATATATATATATATA CA	CCR3	ENSG00000183625.16	transcript	ENST00000395940.3	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr3	TogoVar
CCR6_chr6_167118096_167144141	167130951	C C	TTCCGGGA others(25): Show TTCCGGGACTCCTCCCTCTGGGACCACCCTCCC	intron_variant intron_variant	MODIFIER	HG02145.hp2 HG02145.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0004 a0001c0003t0004	a0001c0003t0004g0236 a0001c0003t0004g0236	1	460	0.0022	32	c.-97 others(49): Show c.-97-5088_-97-5087insTTCCGGGACTCCTCCCTCTGGGACCACC CTCC	CCR6	ENSG00000112486.18	transcript	ENST00000341935.10	protein_coding	1/2			chr6	TogoVar
CCR6_chr6_167118096_167144141	167140511	C C	CATTTTTT others(25): Show CATTTTTTATTTTTTGTTTTTACATTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18965.hp2 NA18965.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0014 a0001c0001t0014	a0001c0001t0014g0004 a0001c0001t0014g0004	1	460	0.0022	32	c.31 others(43): Show c.3156_*3157insATTTTTTATTTTTTGTTTTTACATTTTTTTTT	CCR6	ENSG00000112486.18	transcript	ENST00000341935.10	protein_coding		1371		chr6	TogoVar
CCR8_chr3_39324709_39338680	39337233	C C	CATATATA others(25): Show CATATATATATATATATATATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02886.hp2 HG03486.hp2 NA18944.hp1 others(5): Show HG02886.hp2 HG03486.hp2 NA18944.hp1 NA18987.hp1 NA19011.hp1 NA19058.hp1 NA19079.hp1 NA19086.hp1	a0001 a0006 a0001 a0006	a0001c0001 a0006c0003 a0001c0001 a0006c0003	a0001c0001t0001 a0006c0003t0001 a0001c0001t0001 a0006c0003t0001	a0001c0001t0001g0001 a0001c0001t0001g0002 a0006c0003t0001g0001 a0001c0001t0001g0001 a0001c0001t0001g0002 a0006c0003t0001g0001	8	398	0.0201	32	c.38 others(43): Show c.3834_*3835insATATATATATATATATATATATATATATATAT	CCR8	ENSG00000179934.7	transcript	ENST00000326306.5	protein_coding		3554		chr3	TogoVar
CCSER1_chr4_90122394_91610295	90551706	C C	CTCTCTCT others(25): Show CTCTCTCTCTCTCTATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02723.hp2 HG02723.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0022 a0001c0001t0004g0022	1	38	0.0263	32	c.172 others(53): Show c.1725-76318_1725-76317insCTCTCTCTCTCTATATATATATAT ATATATAT	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	5/10		INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90551706	C C	CTCTCTCT others(25): Show CTCTCTCTCTCTCTCTATATATATATATATATA	intron_variant intron_variant	MODIFIER	NA18906.hp2 NA18906.hp2	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0001 a0004c0004t0001	a0004c0004t0001g0021 a0004c0004t0001g0021	1	38	0.0263	32	c.172 others(53): Show c.1725-76318_1725-76317insCTCTCTCTCTCTCTATATATATAT ATATATAT	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	5/10		INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER2_chr10_84323589_84523517	84512405	A A	AGAGAGAG others(25): Show AGAGAGAGAGAGAGAGGGGGAGGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG02056.hp2 HG02074.hp2 HG02080.hp2 others(11): Show HG02056.hp2 HG02074.hp2 HG02080.hp2 HG02273.hp1 NA18612.hp2 NA18969.hp2 NA18975.hp1 NA18979.hp1 NA18981.hp2 NA18994.hp2 NA18999.hp1 NA19010.hp1 NA19065.hp2 NA19078.hp2	a0002 a0002	a0002c0002 a0002c0003 a0002c0002 a0002c0003	a0002c0002t0003 a0002c0003t0006 a0002c0002t0003 a0002c0003t0006	a0002c0002t0003g0362 a0002c0003t0006g0012 a0002c0003t0006g0013 others(11): Show a0002c0002t0003g0362 a0002c0003t0006g0012 a0002c0003t0006g0013 a0002c0003t0006g0014 a0002c0003t0006g0015 a0002c0003t0006g0016 a0002c0003t0006g0017 a0002c0003t0006g0018 a0002c0003t0006g0019 a0002c0003t0006g0020 a0002c0003t0006g0021 a0002c0003t0006g0023 a0002c0003t0006g0024 a0002c0003t0006g0025	14	370	0.0378	32	c.232 others(51): Show c.2326-1033_2326-1032insAGAGGGGGAGGAGAGAGAGAGGAGAG AGAGAG	CCSER2	ENSG00000107771.17	transcript	ENST00000372088.8	protein_coding	9/9		INFO_REALIGN_3_PRIME	chr10	TogoVar
CCZ1B_chr7_6793937_6831275	6825661	A A	ACACACAC others(25): Show ACACACACACACACACACACACACCCACACACC	intron_variant intron_variant	MODIFIER	HG02922.hp2 HG02976.hp1 HG02976.hp2 others(1): Show HG02922.hp2 HG02976.hp1 HG02976.hp2 HG03579.hp1	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0006 a0003c0004t0006	a0003c0004t0006g0006 a0003c0004t0006g0032 a0003c0004t0006g0033 a0003c0004t0006g0006 a0003c0004t0006g0032 a0003c0004t0006g0033	4	354	0.0113	32	c.120 others(47): Show c.120+416_120+417insGGTGTGTGGGTGTGTGTGTGTGTGTGTGTG TG	CCZ1B	ENSG00000146574.16	transcript	ENST00000316731.13	protein_coding	1/14			chr7	TogoVar
CCZ1B_chr7_6793937_6831275	6830739	C C	CACACACA others(25): Show CACACACACATATATATATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA20905.hp1 NA20905.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0004 a0002c0003t0004	a0002c0003t0004g0159 a0002c0003t0004g0159	1	354	0.0028	32	c.-45 others(43): Show c.-4543_-4542insATATATATATATATATATATATATGTGTGTGT	CCZ1B	ENSG00000146574.16	transcript	ENST00000316731.13	protein_coding		4465		chr7	TogoVar
CCZ1B_chr7_6793937_6831275	6830739	C C	CACACACA others(25): Show CACACACATATATATATATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02004.hp1 HG03704.hp2 NA19043.hp1 HG02004.hp1 HG03704.hp2 NA19043.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0003 a0002c0003t0005 a0002c0003t0003 a0002c0003t0005	a0002c0003t0003g0107 a0002c0003t0005g0141 a0002c0003t0005g0142 a0002c0003t0003g0107 a0002c0003t0005g0141 a0002c0003t0005g0142	3	354	0.0085	32	c.-45 others(43): Show c.-4543_-4542insATATATATATATATATATATATATATGTGTGT	CCZ1B	ENSG00000146574.16	transcript	ENST00000316731.13	protein_coding		4465		chr7	TogoVar
CCZ1B_chr7_6793937_6831275	6830739	C C	CACACATA others(25): Show CACACATATATATATATATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03834.hp2 HG03834.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0005 a0002c0003t0005	a0002c0003t0005g0158 a0002c0003t0005g0158	1	354	0.0028	32	c.-45 others(43): Show c.-4543_-4542insATATATATATATATATATATATATATATGTGT	CCZ1B	ENSG00000146574.16	transcript	ENST00000316731.13	protein_coding		4465		chr7	TogoVar
CCZ1_chr7_5893733_5931550	5920470	C C	CTTTTTTT others(25): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02523.hp1 HG02572.hp2 HG02523.hp1 HG02572.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0037 a0001c0001t0002g0081 a0001c0001t0002g0037 a0001c0001t0002g0081	2	114	0.0175	32	c.110 others(49): Show c.1106+521_1106+522insTTTTTTTTTTTTTTTTTTTTTTTTTTTT TTTT	CCZ1	ENSG00000122674.12	transcript	ENST00000325974.9	protein_coding	12/14		INFO_REALIGN_3_PRIME	chr7	TogoVar
CD163L1_chr12_7349960_7449153	7389946	T T	TTATATAT others(25): Show TTATATATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	NA19091.hp1 NA19091.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0189 a0001c0001t0001g0189	1	384	0.0026	32	c.205 others(51): Show c.2050+6148_2050+6149insTATATATATATATATATATATATATA TATATA	CD163L1	ENSG00000177675.9	transcript	ENST00000313599.8	protein_coding	8/19			chr12	TogoVar
CD163L1_chr12_7349960_7449153	7421542	C C	CATATACA others(25): Show CATATACATATATGTACATATATACATATATGT	intron_variant intron_variant	MODIFIER	HG02818.hp2 HG02818.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0002 a0001c0004t0002	a0001c0004t0002g0115 a0001c0004t0002g0115	1	384	0.0026	32	c.766 others(51): Show c.766+10873_766+10874insACATATATGTATATATGTACATATAT GTATAT	CD163L1	ENSG00000177675.9	transcript	ENST00000313599.8	protein_coding	4/19			chr12	TogoVar
CD163_chr12_7465811_7508777	7483841	A A	ATATATAT others(25): Show ATATATATATATATATATATATATATATTTTTT	intron_variant intron_variant	MODIFIER	NA20129.hp1 NA20129.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0204 a0001c0003t0001g0204	1	428	0.0023	32	c.278 others(49): Show c.2780-167_2780-166insAAAAAATATATATATATATATATATATA TATA	CD163	ENSG00000177575.13	transcript	ENST00000432237.3	protein_coding	11/16			chr12	TogoVar
CD163_chr12_7465811_7508777	7483841	A A	ATATATAT others(25): Show ATATATATATATATATATATATATTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA21309.hp2 NA21309.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0203 a0001c0003t0001g0203	1	428	0.0023	32	c.278 others(49): Show c.2780-167_2780-166insAAAAAAAAAATATATATATATATATATA TATA	CD163	ENSG00000177575.13	transcript	ENST00000432237.3	protein_coding	11/16			chr12	TogoVar
CD19_chr16_28926971_28944342	28929893	T T	TATAGAGA others(25): Show TATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18971.hp1 NA18971.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	400	0.0025	32	c.-21 others(43): Show c.-2108_-2107insATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	CD19	ENSG00000177455.15	transcript	ENST00000538922.8	protein_coding		2077		chr16	TogoVar
CD19_chr16_28926971_28944342	28929893	T T	TATATAGA others(25): Show TATATAGAGAGAGAGAGAGAGAGAGAGAGAGAG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00741.hp2 HG00741.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0001 a0002c0003t0001g0001	1	400	0.0025	32	c.-21 others(43): Show c.-2108_-2107insATATAGAGAGAGAGAGAGAGAGAGAGAGAGAG	CD19	ENSG00000177455.15	transcript	ENST00000538922.8	protein_coding		2077		chr16	TogoVar
CD19_chr16_28926971_28944342	28929893	T T	TATATATA others(25): Show TATATATATATATATAGAGAGAGAGAGAGAGAG	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19088.hp2 NA19088.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0005 a0001c0001t0002g0005	1	400	0.0025	32	c.-21 others(43): Show c.-2108_-2107insATATATATATATATAGAGAGAGAGAGAGAGAG	CD19	ENSG00000177455.15	transcript	ENST00000538922.8	protein_coding		2077		chr16	TogoVar
CD200_chr3_112328156_112367812	112342306	C C	CTTCCTTC others(25): Show CTTCCTTCCTTCCTTCCTTCCTTTCTTCTTTCT	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG01891.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0264 a0001c0001t0006g0264	1	408	0.0025	32	c.94+ others(47): Show c.94+1325_94+1326insCCTTCCTTCCTTCCTTCCTTTCTTCTTTCT TT	CD200	ENSG00000091972.18	transcript	ENST00000315711.12	protein_coding	2/5		INFO_REALIGN_3_PRIME	chr3	TogoVar
CD226_chr18_69848274_69952873	69851192	C C	CTTTTTTT others(25): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01433.hp2 NA18952.hp2 HG01433.hp2 NA18952.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0020 a0002c0002t0122 a0002c0002t0020 a0002c0002t0122	a0002c0002t0020g0152 a0002c0002t0122g0133 a0002c0002t0020g0152 a0002c0002t0122g0133	2	256	0.0078	32	c.13 others(45): Show c.13121_*13122insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	CD226	ENSG00000150637.9	transcript	ENST00000582621.6	protein_coding		2081		chr18	TogoVar
CD226_chr18_69848274_69952873	69894420	A A	AAGGAAGG others(25): Show AAGGAAGGAAGGAAGGAAGGAAGGGAGGGAGGG	intron_variant intron_variant	MODIFIER	NA19003.hp2 NA19003.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0183 a0001c0001t0001g0183	1	256	0.0039	32	c.727 others(49): Show c.727+1280_727+1281insCCCTCCCTCCCTTCCTTCCTTCCTTCCT TCCT	CD226	ENSG00000150637.9	transcript	ENST00000582621.6	protein_coding	3/5			chr18	TogoVar
CD226_chr18_69848274_69952873	69894420	A A	AAGGAAGG others(25): Show AAGGAAGGAAGGAAGGAAGGGAGGGAGGGAGGG	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG01952.hp2 HG01993.hp1 HG01109.hp2 HG01952.hp2 HG01993.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0054 a0001c0001t0001 a0001c0001t0054	a0001c0001t0001g0125 a0001c0001t0001g0127 a0001c0001t0054g0004 a0001c0001t0001g0125 a0001c0001t0001g0127 a0001c0001t0054g0004	3	256	0.0117	32	c.727 others(49): Show c.727+1280_727+1281insCCCTCCCTCCCTCCCTTCCTTCCTTCCT TCCT	CD226	ENSG00000150637.9	transcript	ENST00000582621.6	protein_coding	3/5			chr18	TogoVar
CD226_chr18_69848274_69952873	69894420	A A	AAGGAAGG others(25): Show AAGGAAGGAAGGAAGGGAGGGAGGGAGGGAGGG	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG01069.hp1 HG01891.hp1 others(6): Show HG00099.hp1 HG01069.hp1 HG01891.hp1 HG02055.hp1 HG02129.hp1 HG02129.hp2 HG02630.hp1 NA18990.hp2 NA20300.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0004c0005 a0001c0001 a0004c0005	a0001c0001t0001 a0001c0001t0033 a0001c0001t0042 others(4): Show a0001c0001t0001 a0001c0001t0033 a0001c0001t0042 a0001c0001t0044 a0001c0001t0130 a0001c0001t0146 a0004c0005t0100	a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0033g0083 others(6): Show a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0033g0083 a0001c0001t0042g0107 a0001c0001t0044g0246 a0001c0001t0044g0247 a0001c0001t0130g0109 a0001c0001t0146g0252 a0004c0005t0100g0104	9	256	0.0352	32	c.727 others(49): Show c.727+1280_727+1281insCCCTCCCTCCCTCCCTCCCTTCCTTCCT TCCT	CD226	ENSG00000150637.9	transcript	ENST00000582621.6	protein_coding	3/5			chr18	TogoVar
CD226_chr18_69848274_69952873	69894420	A A	AAGGAAGG others(25): Show AAGGAAGGAAGGGAGGGAGGGAGGGAGGAAGGG	intron_variant intron_variant	MODIFIER	HG02976.hp1 HG03540.hp2 HG02976.hp1 HG03540.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0045 a0001c0001t0086 a0001c0001t0045 a0001c0001t0086	a0001c0001t0045g0245 a0001c0001t0086g0071 a0001c0001t0045g0245 a0001c0001t0086g0071	2	256	0.0078	32	c.727 others(49): Show c.727+1280_727+1281insCCCTTCCTCCCTCCCTCCCTCCCTTCCT TCCT	CD226	ENSG00000150637.9	transcript	ENST00000582621.6	protein_coding	3/5			chr18	TogoVar
CD226_chr18_69848274_69952873	69894420	A A	AAGGAAGG others(25): Show AAGGAAGGAAGGGAGGGAGGGAGGGAGGGAGGG	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG02615.hp1 NA18956.hp2 HG00639.hp2 HG02615.hp1 NA18956.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0033 a0001c0001t0090 a0001c0001t0011 a0001c0001t0033 a0001c0001t0090	a0001c0001t0011g0192 a0001c0001t0033g0082 a0001c0001t0090g0054 a0001c0001t0011g0192 a0001c0001t0033g0082 a0001c0001t0090g0054	3	256	0.0117	32	c.727 others(49): Show c.727+1280_727+1281insCCCTCCCTCCCTCCCTCCCTCCCTTCCT TCCT	CD226	ENSG00000150637.9	transcript	ENST00000582621.6	protein_coding	3/5			chr18	TogoVar
CD28_chr2_203701639_203743912	203705802	C C	CTCTTTCT others(25): Show CTCTTTCTTTCTTTCCATCTTTCTTTCTTTCTT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18952.hp2 NA18968.hp1 NA18952.hp2 NA18968.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0003	2	390	0.0051	32	c.-89 others(41): Show c.-895_-894insTCTTTCTTTCTTTCCATCTTTCTTTCTTTCTT	CD28	ENSG00000178562.18	transcript	ENST00000324106.9	protein_coding		836		chr2	TogoVar
CD28_chr2_203701639_203743912	203705818	A A	ATCTTTCT others(25): Show ATCTTTCTTTCTTTCTTTCTTTTTTTCTTTCTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01516.hp1 HG01517.hp1 HG03688.hp1 others(9): Show HG01516.hp1 HG01517.hp1 HG03688.hp1 HG03710.hp1 HG04199.hp1 NA18961.hp2 NA18967.hp1 NA18970.hp1 NA18983.hp1 NA18991.hp2 NA19066.hp2 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0008 a0001c0001t0023 a0001c0001t0001 a0001c0001t0008 a0001c0001t0023	a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0010 others(6): Show a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0010 a0001c0001t0001g0046 a0001c0001t0001g0049 a0001c0001t0001g0063 a0001c0001t0001g0068 a0001c0001t0008g0080 a0001c0001t0023g0015	12	390	0.0308	32	c.-87 others(41): Show c.-879_-878insTCTTTCTTTCTTTCTTTCTTTTTTTCTTTCTT	CD28	ENSG00000178562.18	transcript	ENST00000324106.9	protein_coding		820		chr2	TogoVar
CD2AP_chr6_47472789_47632263	47566323	T T	TATATATA others(25): Show TATATATATATATATATATATATATACACACAC	intron_variant intron_variant	MODIFIER	NA18999.hp2 NA19004.hp2 NA18999.hp2 NA19004.hp2	a0001 a0005 a0001 a0005	a0001c0001 a0005c0007 a0001c0001 a0005c0007	a0001c0001t0015 a0005c0007t0005 a0001c0001t0015 a0005c0007t0005	a0001c0001t0015g0262 a0005c0007t0005g0224 a0001c0001t0015g0262 a0005c0007t0005g0224	2	322	0.0062	32	c.542 others(49): Show c.542-7740_542-7739insTATATATATATATATATATATATACACA CACA	CD2AP	ENSG00000198087.7	transcript	ENST00000359314.5	protein_coding	5/17		INFO_REALIGN_3_PRIME	chr6	TogoVar
CD2AP_chr6_47472789_47632263	47566323	T T	TATATATA others(25): Show TATATATATATATATATATATATATATACACAC	intron_variant intron_variant	MODIFIER	HG04228.hp1 NA18943.hp1 NA18982.hp2 others(1): Show HG04228.hp1 NA18943.hp1 NA18982.hp2 NA19055.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0051 a0001c0001t0001 a0001c0001t0051	a0001c0001t0001g0234 a0001c0001t0001g0235 a0001c0001t0001g0237 others(1): Show a0001c0001t0001g0234 a0001c0001t0001g0235 a0001c0001t0001g0237 a0001c0001t0051g0287	4	322	0.0124	32	c.542 others(49): Show c.542-7740_542-7739insTATATATATATATATATATATATATACA CACA	CD2AP	ENSG00000198087.7	transcript	ENST00000359314.5	protein_coding	5/17		INFO_REALIGN_3_PRIME	chr6	TogoVar
CD2AP_chr6_47472789_47632263	47589565	C C	CACACATA others(25): Show CACACATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18979.hp1 NA18979.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0110 a0001c0001t0004g0110	1	322	0.0031	32	c.110 others(51): Show c.1109-6295_1109-6294insCACATATATATATATATATATATATA TATATA	CD2AP	ENSG00000198087.7	transcript	ENST00000359314.5	protein_coding	11/17		INFO_REALIGN_3_PRIME	chr6	TogoVar
CD2AP_chr6_47472789_47632263	47589565	C C	CACATATA others(25): Show CACATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA19060.hp2 NA21309.hp2 NA19060.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0064 a0001c0001t0001 a0001c0001t0064	a0001c0001t0001g0233 a0001c0001t0064g0284 a0001c0001t0001g0233 a0001c0001t0064g0284	2	322	0.0062	32	c.110 others(51): Show c.1109-6295_1109-6294insCATATATATATATATATATATATATA TATATA	CD2AP	ENSG00000198087.7	transcript	ENST00000359314.5	protein_coding	11/17		INFO_REALIGN_3_PRIME	chr6	TogoVar
CD300LD_chr17_74574365_74597283	74596516	C C	CCCCCATT others(25): Show CCCCCATTATCAACCCTCACACAGGCACAGCCT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18942.hp1 NA18942.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0103 a0002c0002t0001g0103	1	440	0.0023	32	c.-43 others(43): Show c.-4315_-4314insAGGCTGTGCCTGTGTGAGGGTTGATAATGGGG	CD300LD	ENSG00000204345.1	transcript	ENST00000375352.1	protein_coding		4234		chr17	TogoVar
CD300LG_chr17_43842176_43868639	43842427	C C	CACGCCTC others(25): Show CACGCCTCTCCACGCCTCTCCACGCCTCTCTCT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp1 HG00642.hp2 HG01070.hp1 others(5): Show HG00099.hp1 HG00642.hp2 HG01070.hp1 HG01071.hp2 HG01099.hp1 HG01168.hp1 HG01358.hp2 HG01433.hp1	a0002 a0008 a0002 a0008	a0002c0002 a0008c0009 a0002c0002 a0008c0009	a0002c0002t0004 a0008c0009t0004 a0002c0002t0004 a0008c0009t0004	a0002c0002t0004g0002 a0002c0002t0004g0014 a0002c0002t0004g0033 others(1): Show a0002c0002t0004g0002 a0002c0002t0004g0014 a0002c0002t0004g0033 a0008c0009t0004g0002	8	300	0.0267	32	c.-47 others(43): Show c.-4790_-4789insACGCCTCTCCACGCCTCTCCACGCCTCTCTCT	CD300LG	ENSG00000161649.14	transcript	ENST00000317310.5	protein_coding		4748		chr17	TogoVar
CD36_chr7_80633642_80684274	80683296	G G	GTATATAC others(25): Show GTATATACACATATGTGTATGTGTATATATACA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01243.hp1 HG01243.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0027 a0001c0001t0027	a0001c0001t0027g0023 a0001c0001t0027g0023	1	392	0.0026	32	c.69 others(43): Show c.6913_*6914insTATATACACATATGTGTATGTGTATATATACA	CD36	ENSG00000135218.19	transcript	ENST00000447544.7	protein_coding		4023		chr7	TogoVar
CD36_chr7_80633642_80684274	80683338	G G	GTGTATAT others(25): Show GTGTATATATACATATGTGTATATATGTATATA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01346.hp1 HG01346.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0219 a0001c0001t0005g0219	1	392	0.0026	32	c.69 others(43): Show c.6955_*6956insTGTATATATACATATGTGTATATATGTATATA	CD36	ENSG00000135218.19	transcript	ENST00000447544.7	protein_coding		4065		chr7	TogoVar
CD38_chr4_15773328_15858232	15780528	A A	ACGCACAC others(25): Show ACGCACACACACACACACACACACACACACACG	intron_variant intron_variant	MODIFIER	HG03041.hp1 HG03041.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0056 a0001c0001t0004g0056	1	344	0.0029	32	c.233 others(49): Show c.233+1882_233+1883insGCACACACACACACACACACACACACAC ACGC	CD38	ENSG00000004468.13	transcript	ENST00000226279.8	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr4	TogoVar
CD3G_chr11_118339344_118360161	118350889	G G	GAAAAAAA others(25): Show GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01074.hp2 HG01993.hp1 HG01074.hp2 HG01993.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0013 a0002c0002t0013	a0002c0002t0013g0035 a0002c0002t0013g0035	2	442	0.0045	32	c.439 others(47): Show c.439+220_439+221insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AA	CD3G	ENSG00000160654.11	transcript	ENST00000532917.3	protein_coding	4/6		INFO_REALIGN_3_PRIME	chr11	TogoVar
CD3G_chr11_118339344_118360161	118355518	C C	CATATGTA others(25): Show CATATGTATATATACACATACACACATATGTAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03516.hp2 HG03516.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0032 a0001c0001t0032	a0001c0001t0032g0014 a0001c0001t0032g0014	1	442	0.0023	32	c.24 others(43): Show c.2418_*2419insATATGTATATATACACATACACACATATGTAT	CD3G	ENSG00000160654.11	transcript	ENST00000532917.3	protein_coding		358		chr11	TogoVar
CD3G_chr11_118339344_118360161	118355622	T T	TATATGTA others(25): Show TATATGTATATATACACATATGTATATATACAC	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19086.hp2 NA19086.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0002 a0001c0001t0004g0002	1	442	0.0023	32	c.25 others(43): Show c.2522_*2523insATATGTATATATACACATATGTATATATACAC	CD3G	ENSG00000160654.11	transcript	ENST00000532917.3	protein_coding		462		chr11	TogoVar
CD74_chr5_150396639_150417910	150401640	T T	TCTAATTA others(25): Show TCTAATTACTACCTTTTATTCTAATGTGAACCA	splice_region_variant splice_region_variant	LOW	HG03139.hp2 HG03139.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0059 a0001c0001t0008g0059	1	408	0.0025	32	c.56 others(41): Show c.568_*599dupTGGTTCACATTAGAATAAAAGGTAGTAATTAG	CD74	ENSG00000019582.17	transcript	ENST00000009530.13	protein_coding	9/9			chr5	TogoVar
CD7_chr17_82309873_82322608	82318430	T T	TGTGTGCA others(25): Show TGTGTGCAGAGACGGGTGCGTGTGGACACGTGC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02572.hp1 HG02572.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0013 a0001c0001t0001g0013	1	416	0.0024	32	c.-93 others(41): Show c.-936_-935insGCACGTGTCCACACGCACCCGTCTCTGCACAC	CD7	ENSG00000173762.8	transcript	ENST00000312648.8	protein_coding		823		chr17	TogoVar
CD7_chr17_82309873_82322608	82318915	A A	ATGTGTGT others(25): Show ATGTGTGTGGACACGCGTGTGTGCAGAGACGGG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03654.hp2 HG03654.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	416	0.0024	32	c.-14 others(43): Show c.-1421_-1420insCCCGTCTCTGCACACACGCGTGTCCACACACA	CD7	ENSG00000173762.8	transcript	ENST00000312648.8	protein_coding		1308		chr17	TogoVar
CD83_chr6_14112772_14141906	14140506	C C	CAAAAAAA others(25): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18940.hp2 NA18940.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0007 a0001c0001t0001g0007	1	438	0.0023	32	c.52 others(43): Show c.5270_*5271insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	CD83	ENSG00000112149.10	transcript	ENST00000379153.4	protein_coding		3601		chr6	TogoVar
CD83_chr6_14112772_14141906	14140508	C C	CAAAAAAA others(25): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00438.hp1 HG01071.hp1 HG02027.hp1 others(7): Show HG00438.hp1 HG01071.hp1 HG02027.hp1 HG02155.hp2 HG04199.hp1 NA18978.hp2 NA18982.hp1 NA19001.hp2 NA19063.hp1 NA19080.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0001 a0001c0001t0002 a0001c0001t0004	a0001c0001t0001g0009 a0001c0001t0001g0017 a0001c0001t0001g0029 others(6): Show a0001c0001t0001g0009 a0001c0001t0001g0017 a0001c0001t0001g0029 a0001c0001t0001g0068 a0001c0001t0002g0001 a0001c0001t0002g0049 a0001c0001t0002g0057 a0001c0001t0002g0090 a0001c0001t0004g0003	10	438	0.0228	32	c.52 others(43): Show c.5272_*5273insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	CD83	ENSG00000112149.10	transcript	ENST00000379153.4	protein_coding		3603		chr6	TogoVar

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