Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
CWF19L2_chr11_107321360_107462825	107402873	G G	GTGTGTAT others(25): Show GTGTGTATGTATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG00438.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0002 a0003c0003t0002	a0003c0003t0002g0034 a0003c0003t0002g0034	1	392	0.0026	32	c.161 others(51): Show c.1618-9979_1618-9978insTATATATATATATATATATATATACA TACACA	CWF19L2	ENSG00000152404.16	transcript	ENST00000282251.10	protein_coding	10/17			chr11	TogoVar
CWH43_chr4_48981275_49067079	49039306	G G	GATATATA others(25): Show GATATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01255.hp1 NA18906.hp2 HG01255.hp1 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0193 a0001c0001t0001g0251 a0001c0001t0001g0193 a0001c0001t0001g0251	2	296	0.0068	32	c.180 others(51): Show c.1803+1153_1803+1154insTATATATATATATATATATATATATA TATATA	CWH43	ENSG00000109182.12	transcript	ENST00000226432.9	protein_coding	13/15		INFO_REALIGN_3_PRIME	chr4	TogoVar
CWH43_chr4_48981275_49067079	49039320	T T	TATATATA others(25): Show TATATATATATATATATATATATATATATACTG	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG01167.hp2 HG01993.hp2 others(9): Show HG00735.hp1 HG01167.hp2 HG01993.hp2 HG02735.hp2 HG03942.hp2 NA18954.hp1 NA18955.hp1 NA18956.hp1 NA18969.hp2 NA19043.hp2 NA19082.hp2 NA19091.hp1	a0002 a0003 a0009 a0002 a0003 a0009	a0002c0002 a0003c0003 a0009c0010 a0002c0002 a0003c0003 a0009c0010	a0002c0002t0001 a0003c0003t0001 a0009c0010t0001 a0002c0002t0001 a0003c0003t0001 a0009c0010t0001	a0002c0002t0001g0094 a0003c0003t0001g0004 a0003c0003t0001g0027 others(8): Show a0002c0002t0001g0094 a0003c0003t0001g0004 a0003c0003t0001g0027 a0003c0003t0001g0028 a0003c0003t0001g0041 a0003c0003t0001g0043 a0003c0003t0001g0044 a0003c0003t0001g0122 a0003c0003t0001g0125 a0003c0003t0001g0126 a0009c0010t0001g0145	12	296	0.0405	32	c.180 others(51): Show c.1803+1153_1803+1154insTATATATATATATATACTGATATATA TATATA	CWH43	ENSG00000109182.12	transcript	ENST00000226432.9	protein_coding	13/15		INFO_REALIGN_3_PRIME	chr4	TogoVar
CXADR_chr21_17508043_17575100	17534060	C C	CTATATAT others(25): Show CTATATATATATATATACACATATATATAGCTA	intron_variant intron_variant	MODIFIER	HG01928.hp1 NA19086.hp2 HG01928.hp1 NA19086.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0019 a0001c0001t0001 a0001c0001t0019	a0001c0001t0001g0009 a0001c0001t0019g0331 a0001c0001t0001g0009 a0001c0001t0019g0331	2	352	0.0057	32	c.44- others(49): Show c.44-12957_44-12956insTATATACACATATATATAGCTATATATA TATA	CXADR	ENSG00000154639.19	transcript	ENST00000284878.12	protein_coding	1/6		INFO_REALIGN_3_PRIME	chr21	TogoVar
CXorf49_chrX_71709371_71723285	71722142	G G	GTGTGTGT others(25): Show GTGTGTGTGCGCGCGCGCGCGCGCGCGCGCACA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01175.hp2 HG01175.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0005 a0001c0001t0002g0005	1	73	0.0137	32	c.-39 others(43): Show c.-3992_-3991insTGTGCGCGCGCGCGCGCGCGCGCGCACACACA	CXorf49	ENSG00000215115.7	transcript	ENST00000535490.3	protein_coding		3858		chrX	TogoVar
CXorf49_chrX_71709371_71723285	71722142	G G	GTGTGTGT others(25): Show GTGTGTGTGTGCGCGCGCGCATGCGCGCGCACA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02040.hp1 HG02040.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	73	0.0137	32	c.-39 others(43): Show c.-3992_-3991insTGTGCGCGCGCATGCGCGCGCGCACACACACA	CXorf49	ENSG00000215115.7	transcript	ENST00000535490.3	protein_coding		3858		chrX	TogoVar
CXorf49_chrX_71709371_71723285	71722142	G G	GTGTGTGT others(25): Show GTGTGTGTGTGCGCGCGCGCGCGCGCGCGCACA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp2 HG00099.hp2	a0008 a0008	a0008c0013 a0008c0013	a0008c0013t0001 a0008c0013t0001	a0008c0013t0001g0020 a0008c0013t0001g0020	1	73	0.0137	32	c.-39 others(43): Show c.-3992_-3991insTGTGCGCGCGCGCGCGCGCGCGCACACACACA	CXorf49	ENSG00000215115.7	transcript	ENST00000535490.3	protein_coding		3858		chrX	TogoVar
CXorf49_chrX_71709371_71723285	71722142	G G	GTGTGTGT others(25): Show GTGTGTGTGTGCGCGCGCGCGGCCGCGCGCACA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01071.hp2 HG01071.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	73	0.0137	32	c.-39 others(43): Show c.-3992_-3991insTGTGCGCGCGGCCGCGCGCGCGCACACACACA	CXorf49	ENSG00000215115.7	transcript	ENST00000535490.3	protein_coding		3858		chrX	TogoVar
CXorf49_chrX_71709371_71723285	71722142	G G	GTGTGTGT others(25): Show GTGTGTGTGTGTGCGCGCGCCGCGGCGCGCACA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02055.hp1 HG02055.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0016 a0001c0001t0003g0016	1	73	0.0137	32	c.-39 others(43): Show c.-3992_-3991insTGTGCGCGCCGCGGCGCGCGCACACACACACA	CXorf49	ENSG00000215115.7	transcript	ENST00000535490.3	protein_coding		3858		chrX	TogoVar
CXorf49_chrX_71709371_71723285	71722142	G G	GTGTGTGT others(25): Show GTGTGTGTGTGTGCGCGCGCGCGCGCGCGCACA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19091.hp1 NA19091.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	73	0.0137	32	c.-39 others(43): Show c.-3992_-3991insTGTGCGCGCGCGCGCGCGCGCACACACACACA	CXorf49	ENSG00000215115.7	transcript	ENST00000535490.3	protein_coding		3858		chrX	TogoVar
CXorf49_chrX_71709371_71723285	71722142	G G	GTGTGTGT others(25): Show GTGTGTGTGTGTGTGCGCGCGCGCGCGCGCACA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02074.hp1 HG03540.hp1 HG02074.hp1 HG03540.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0005 a0002c0002t0001 a0001c0001t0005 a0002c0002t0001	a0001c0001t0005g0027 a0002c0002t0001g0007 a0001c0001t0005g0027 a0002c0002t0001g0007	2	73	0.0274	32	c.-39 others(43): Show c.-3992_-3991insTGTGCGCGCGCGCGCGCGCACACACACACACA	CXorf49	ENSG00000215115.7	transcript	ENST00000535490.3	protein_coding		3858		chrX	TogoVar
CXorf49_chrX_71709371_71723285	71722146	G G	GTGTGTGC others(25): Show GTGTGTGCGCGCGCGCGCAGCGCGCACATGTGA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19089.hp1 NA19089.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0025 a0001c0001t0004g0025	1	73	0.0137	32	c.-39 others(43): Show c.-3996_-3995insTCACATGTGCGCGCTGCGCGCGCGCGCACACA	CXorf49	ENSG00000215115.7	transcript	ENST00000535490.3	protein_coding		3862		chrX	TogoVar
CYB561A3_chr11_61343805_61366882	61366307	G G	GAGCTCAA others(25): Show GAGCTCAAGCAATTCTCCTGCTTCTGCCTCCCA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02572.hp2 HG02717.hp1 HG02723.hp2 others(1): Show HG02572.hp2 HG02717.hp1 HG02723.hp2 HG02886.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0014 a0001c0001t0002g0102 a0001c0001t0002g0014 a0001c0001t0002g0102	4	260	0.0154	32	c.-47 others(43): Show c.-4718_-4687dupTGGGAGGCAGAAGCAGGAGAATTGCTTGAGCT	CYB561A3	ENSG00000162144.10	transcript	ENST00000294072.9	protein_coding		4426		chr11	TogoVar
CYB561D1_chr1_109489094_109505435	109503474	G G	GTATATAT others(25): Show GTATATATATATATATATATATATATATATATA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01516.hp2 HG01517.hp2 HG01891.hp1 others(1): Show HG01516.hp2 HG01517.hp2 HG01891.hp1 HG02486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0002 a0001c0001t0005g0002	4	370	0.0108	32	c.72 others(43): Show c.7215_*7216insTATATATATATATATATATATATATATATATA	CYB561D1	ENSG00000174151.15	transcript	ENST00000420578.7	protein_coding		3040		chr1	TogoVar
CYB561D1_chr1_109489094_109505435	109503476	T T	TTATATAT others(25): Show TTATATATATATATATATATATATATATATATA	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18522.hp2 NA18522.hp2	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0002 a0001c0006t0002	a0001c0006t0002g0004 a0001c0006t0002g0004	1	370	0.0027	32	c.72 others(43): Show c.7217_*7218insTATATATATATATATATATATATATATATATA	CYB561D1	ENSG00000174151.15	transcript	ENST00000420578.7	protein_coding		3042		chr1	TogoVar
CYB5R3_chr22_42612840_42654392	42650044	C C	CTTTTTTT others(25): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02818.hp2 HG02818.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0032 a0002c0002t0032	a0002c0002t0032g0218 a0002c0002t0032g0218	1	360	0.0028	32	c.-73 others(41): Show c.-730_-729insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	CYB5R3	ENSG00000100243.22	transcript	ENST00000352397.10	protein_coding		653		chr22	TogoVar
CYFIP1_chr15_22862052_22985368	22875885	C C	CATACATA others(25): Show CATACATACATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01123.hp2 HG01255.hp2 HG01257.hp2 others(5): Show HG01123.hp2 HG01255.hp2 HG01257.hp2 HG01928.hp2 HG01952.hp1 HG02273.hp2 HG02698.hp1 NA20805.hp2	a0001 a0002 a0006 a0001 a0002 a0006	a0001c0001 a0001c0002 a0001c0006 others(3): Show a0001c0001 a0001c0002 a0001c0006 a0002c0041 a0006c0023 a0006c0033	a0001c0001t0005 a0001c0002t0005 a0001c0006t0005 others(3): Show a0001c0001t0005 a0001c0002t0005 a0001c0006t0005 a0002c0041t0005 a0006c0023t0005 a0006c0033t0005	a0001c0001t0005g0089 a0001c0002t0005g0189 a0001c0006t0005g0116 others(5): Show a0001c0001t0005g0089 a0001c0002t0005g0189 a0001c0006t0005g0116 a0001c0006t0005g0134 a0001c0006t0005g0172 a0002c0041t0005g0276 a0006c0023t0005g0298 a0006c0033t0005g0194	8	342	0.0234	32	c.304 others(49): Show c.3043-615_3043-614insATATATATATATATATATATATATGTAT GTAT	CYFIP1	ENSG00000273749.5	transcript	ENST00000617928.5	protein_coding	26/30			chr15	TogoVar
CYFIP1_chr15_22862052_22985368	22942448	A A	AAACGCCG others(25): Show AAACGCCGGTCGGCAGCGCGCCAAGTGTCACCG	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG02572.hp1 HG03098.hp1 HG02055.hp2 HG02572.hp1 HG03098.hp1	a0002 a0011 a0002 a0011	a0002c0024 a0002c0025 a0011c0026 a0002c0024 a0002c0025 a0011c0026	a0002c0024t0009 a0002c0025t0009 a0011c0026t0005 a0002c0024t0009 a0002c0025t0009 a0011c0026t0005	a0002c0024t0009g0058 a0002c0025t0009g0076 a0011c0026t0005g0085 a0002c0024t0009g0058 a0002c0025t0009g0076 a0011c0026t0005g0085	3	342	0.0088	32	c.569 others(47): Show c.569+724_569+725insCGGTGACACTTGGCGCGCTGCCGACCGGCG TT	CYFIP1	ENSG00000273749.5	transcript	ENST00000617928.5	protein_coding	6/30			chr15	TogoVar
CYFIP1_chr15_22862052_22985368	22963511	T T	TAACATAA others(25): Show TAACATAACATAACATAACATAACATAACATAA	intron_variant intron_variant	MODIFIER	HG02895.hp2 HG02895.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0012 a0001c0002t0012	a0001c0002t0012g0150 a0001c0002t0012g0150	1	342	0.0029	32	c.-6- others(49): Show c.-6-16252_-6-16221dupTTATGTTATGTTATGTTATGTTATGTTA TGTT	CYFIP1	ENSG00000273749.5	transcript	ENST00000617928.5	protein_coding	1/30			chr15	TogoVar
CYFIP2_chr5_157261123_157400594	157286552	G G	GTATATAT others(25): Show GTATATATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02886.hp1 HG02886.hp1	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0015 a0001c0005t0015	a0001c0005t0015g0100 a0001c0005t0015g0100	1	326	0.0031	32	c.118 others(47): Show c.118-440_118-439insATATATATATATATATATATATATATATAT AT	CYFIP2	ENSG00000055163.21	transcript	ENST00000620254.5	protein_coding	2/30		INFO_REALIGN_3_PRIME	chr5	TogoVar
CYLC1_chrX_83856146_83891698	83878434	A A	AATATATA others(25): Show AATATATATAAATATATATAAATATATATAAAT	intron_variant intron_variant	MODIFIER	HG02155.hp1 NA18948.hp1 NA19070.hp1 HG02155.hp1 NA18948.hp1 NA19070.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0026 a0001c0001t0001g0030 a0001c0001t0001g0031 a0001c0001t0001g0026 a0001c0001t0001g0030 a0001c0001t0001g0031	3	208	0.0144	32	c.192 others(51): Show c.1923+3833_1923+3864dupAATATATATATAAATATATATAAATA TATATA	CYLC1	ENSG00000183035.13	transcript	ENST00000329312.5	protein_coding	4/4		INFO_REALIGN_3_PRIME	chrX	TogoVar
CYP19A1_chr15_51203057_51343596	51223593	T T	TCTCTCAC others(25): Show TCTCTCACACACACACACACACACACACACACA	intron_variant intron_variant	MODIFIER	HG03942.hp1 HG03942.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0236 a0001c0002t0001g0236	1	306	0.0033	32	c.452 others(49): Show c.452-1069_452-1068insTGTGTGTGTGTGTGTGTGTGTGTGTGTG AGAG	CYP19A1	ENSG00000137869.16	transcript	ENST00000396402.6	protein_coding	4/9			chr15	TogoVar
CYP27C1_chr2_127178832_127225299	127204485	A A	AAAGAAAG others(25): Show AAAGAAAGAAAGAAAGAAAGAAAGGAAGGAAGG	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG01884.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0325 a0001c0001t0003g0325	1	352	0.0028	32	c.474 others(47): Show c.474-915_474-914insCCTTCCTTCCTTTCTTTCTTTCTTTCTTTC TT	CYP27C1	ENSG00000186684.14	transcript	ENST00000664447.2	protein_coding	2/8			chr2	TogoVar
CYP27C1_chr2_127178832_127225299	127204555	G G	GAGAGAGA others(25): Show GAGAGAGAAAGAAAGAAAGAGAGAGAGAAAGAA	intron_variant intron_variant	MODIFIER	HG03225.hp1 HG03225.hp1	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0020 a0002c0004t0020	a0002c0004t0020g0020 a0002c0004t0020g0020	1	352	0.0028	32	c.474 others(47): Show c.474-985_474-984insTTCTTTCTCTCTCTCTTTCTTTCTTTCTCT CT	CYP27C1	ENSG00000186684.14	transcript	ENST00000664447.2	protein_coding	2/8			chr2	TogoVar
CYP2A13_chr19_41083451_41101195	41084332	A A	AAAGAAAA others(25): Show AAAGAAAAGAAAGAAAGAAAGAAGGAAAGAAAG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00642.hp1 HG01257.hp1 HG02257.hp2 others(16): Show HG00642.hp1 HG01257.hp1 HG02257.hp2 HG02258.hp2 HG02647.hp2 HG02922.hp1 HG02965.hp1 HG03130.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp1 HG03669.hp2 NA18906.hp1 NA18939.hp2 NA18950.hp1 NA18974.hp1 NA18994.hp2 NA19083.hp1 NA20300.hp2	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0005 a0014	a0001c0001 a0002c0002 a0003c0004 others(3): Show a0001c0001 a0002c0002 a0003c0004 a0003c0006 a0005c0005 a0014c0020	a0001c0001t0001 a0001c0001t0002 a0002c0002t0001 others(6): Show a0001c0001t0001 a0001c0001t0002 a0002c0002t0001 a0002c0002t0003 a0002c0002t0005 a0003c0004t0002 a0003c0006t0002 a0005c0005t0002 a0014c0020t0003	a0001c0001t0001g0130 a0001c0001t0001g0142 a0001c0001t0002g0028 others(13): Show a0001c0001t0001g0130 a0001c0001t0001g0142 a0001c0001t0002g0028 a0001c0001t0002g0115 a0001c0001t0002g0128 a0001c0001t0002g0141 a0001c0001t0002g0151 a0001c0001t0002g0152 a0002c0002t0001g0045 a0002c0002t0003g0002 a0002c0002t0003g0023 a0002c0002t0005g0086 a0003c0004t0002g0123 a0003c0006t0002g0069 a0005c0005t0002g0198 a0014c0020t0003g0177	19	422	0.0450	32	c.-41 others(43): Show c.-4140_-4139insAAGAAAAGAAAGAAAGAAAGAAGGAAAGAAAG	CYP2A13	ENSG00000197838.5	transcript	ENST00000330436.4	protein_coding		4118		chr19	TogoVar
CYP2C18_chr10_94678729_94741190	94712008	A A	ATTTTTTT others(25): Show ATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA19005.hp2 NA19005.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0003 a0002c0002t0003	a0002c0002t0003g0109 a0002c0002t0003g0109	1	378	0.0027	32	c.819 others(49): Show c.819+5068_819+5069insTTTTTTTTTTTTTTTTTTTTTTTTTTTT TTTT	CYP2C18	ENSG00000108242.13	transcript	ENST00000285979.11	protein_coding	5/8		INFO_REALIGN_3_PRIME	chr10	TogoVar
CYP2C9_chr10_94933658_94995091	94934588	A A	ATATATAT others(25): Show ATATATATATATATATGTGTATATATATATGTG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00639.hp2 HG00639.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0134 a0001c0001t0003g0134	1	374	0.0027	32	c.-40 others(43): Show c.-4095_-4094insTATATATATATATATGTGTATATATATATGTG	CYP2C9	ENSG00000138109.11	transcript	ENST00000260682.8	protein_coding		4069		chr10	TogoVar
CYP2F1_chr19_41109432_41133381	41119723	C C	CTCTCTCT others(25): Show CTCTCTCTCTATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02083.hp1 HG02083.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0158 a0001c0001t0001g0158	1	374	0.0027	32	c.335 others(47): Show c.335-623_335-622insCTCTCTCTATATATATATATATATATATAT AT	CYP2F1	ENSG00000197446.9	transcript	ENST00000331105.7	protein_coding	3/9		INFO_REALIGN_3_PRIME	chr19	TogoVar
CYP2F1_chr19_41109432_41133381	41119723	C C	CTCTCTCT others(25): Show CTCTCTCTCTCTCTCTCTATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01069.hp2 HG01069.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0342 a0001c0001t0001g0342	1	374	0.0027	32	c.335 others(47): Show c.335-623_335-622insCTCTCTCTCTCTCTCTATATATATATATAT AT	CYP2F1	ENSG00000197446.9	transcript	ENST00000331105.7	protein_coding	3/9		INFO_REALIGN_3_PRIME	chr19	TogoVar
CYP2F1_chr19_41109432_41133381	41119748	T T	TATATATA others(25): Show TATATATATATATATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	HG02132.hp1 HG02132.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0221 a0001c0001t0001g0221	1	374	0.0027	32	c.335 others(47): Show c.335-598_335-597insTATATATATATATATATATATATATATATA CA	CYP2F1	ENSG00000197446.9	transcript	ENST00000331105.7	protein_coding	3/9		INFO_REALIGN_3_PRIME	chr19	TogoVar
CYP2U1_chr4_107926549_107958461	107944839	C C	CATATATA others(25): Show CATATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01099.hp2 HG01192.hp1 HG01433.hp1 others(18): Show HG01099.hp2 HG01192.hp1 HG01433.hp1 HG02027.hp1 HG02080.hp1 HG02080.hp2 HG02523.hp2 HG02622.hp2 HG02818.hp2 HG02922.hp2 HG03209.hp1 HG03239.hp1 HG03239.hp2 HG03688.hp1 HG03831.hp2 NA18982.hp2 NA18984.hp1 NA19054.hp1 NA19062.hp1 NA19065.hp1 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 a0001c0001t0022 a0001c0001t0023 a0001c0001t0024	a0001c0001t0001g0029 a0001c0001t0001g0047 a0001c0001t0001g0053 others(12): Show a0001c0001t0001g0029 a0001c0001t0001g0047 a0001c0001t0001g0053 a0001c0001t0001g0188 a0001c0001t0002g0012 a0001c0001t0002g0091 a0001c0001t0002g0092 a0001c0001t0002g0098 a0001c0001t0002g0117 a0001c0001t0004g0115 a0001c0001t0005g0199 a0001c0001t0005g0200 a0001c0001t0022g0047 a0001c0001t0023g0093 a0001c0001t0024g0012	21	382	0.0550	32	c.491 others(47): Show c.491-119_491-118insATATATATATATATATATATATATATATAT AT	CYP2U1	ENSG00000155016.18	transcript	ENST00000332884.11	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr4	TogoVar
CYP39A1_chr6_46544580_46657818	46616222	C C	CCCTTCCT others(25): Show CCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTT	intron_variant intron_variant	MODIFIER	NA18977.hp1 NA18978.hp2 NA18977.hp1 NA18978.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0227 a0001c0001t0001g0234 a0001c0001t0001g0227 a0001c0001t0001g0234	2	310	0.0065	32	c.931 others(49): Show c.931+9195_931+9196insAAGGAAGGAAGGAAGGAAGGAAGGAAGG AAGG	CYP39A1	ENSG00000146233.8	transcript	ENST00000275016.3	protein_coding	7/11			chr6	TogoVar
CYP39A1_chr6_46544580_46657818	46616226	C C	CCCTTCCT others(25): Show CCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTT	intron_variant intron_variant	MODIFIER	NA18959.hp2 NA18985.hp1 NA18959.hp2 NA18985.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0245 a0001c0001t0001g0250 a0001c0001t0001g0245 a0001c0001t0001g0250	2	310	0.0065	32	c.931 others(49): Show c.931+9191_931+9192insAAGGAAGGAAGGAAGGAAGGAAGGAAGG AAGG	CYP39A1	ENSG00000146233.8	transcript	ENST00000275016.3	protein_coding	7/11			chr6	TogoVar
CYP39A1_chr6_46544580_46657818	46616230	C C	CCCTTCCT others(25): Show CCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTT	intron_variant intron_variant	MODIFIER	HG03139.hp2 HG03139.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0225 a0001c0001t0001g0225	1	310	0.0032	32	c.931 others(49): Show c.931+9187_931+9188insAAGGAAGGAAGGAAGGAAGGAAGGAAGG AAGG	CYP39A1	ENSG00000146233.8	transcript	ENST00000275016.3	protein_coding	7/11			chr6	TogoVar
CYP39A1_chr6_46544580_46657818	46616242	C C	CCCTCCCT others(25): Show CCCTCCCTTCCTTCCTTCCTTCCTTCCTTCCTT	intron_variant intron_variant	MODIFIER	HG02809.hp2 HG03540.hp2 HG02809.hp2 HG03540.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0294 a0001c0001t0001g0295 a0001c0001t0001g0294 a0001c0001t0001g0295	2	310	0.0065	32	c.931 others(49): Show c.931+9175_931+9176insAAGGAAGGAAGGAAGGAAGGAAGGAAGG GAGG	CYP39A1	ENSG00000146233.8	transcript	ENST00000275016.3	protein_coding	7/11			chr6	TogoVar
CYP39A1_chr6_46544580_46657818	46616282	T T	TCCTTCCT others(25): Show TCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTC	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02145.hp2 HG02717.hp1 others(2): Show HG01884.hp2 HG02145.hp2 HG02717.hp1 HG02818.hp2 HG03516.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0050 a0001c0001t0001g0069 a0001c0001t0001g0070 others(2): Show a0001c0001t0001g0050 a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0103 a0001c0001t0001g0137	5	310	0.0161	32	c.931 others(49): Show c.931+9135_931+9136insGAGGAAGGAAGGAAGGAAGGAAGGAAGG AAGG	CYP39A1	ENSG00000146233.8	transcript	ENST00000275016.3	protein_coding	7/11			chr6	TogoVar
CYP4B1_chr1_46794046_46824413	46816581	G G	GACACACA others(25): Show GACACACACACACACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG01346.hp2 HG01433.hp1 HG02148.hp1 others(3): Show HG01346.hp2 HG01433.hp1 HG02148.hp1 HG02155.hp1 HG02735.hp1 HG03834.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0004 a0002c0002t0002 a0002c0002t0004	a0002c0002t0002g0077 a0002c0002t0002g0081 a0002c0002t0002g0089 others(3): Show a0002c0002t0002g0077 a0002c0002t0002g0081 a0002c0002t0002g0089 a0002c0002t0002g0101 a0002c0002t0002g0116 a0002c0002t0004g0111	6	400	0.0150	32	c.107 others(49): Show c.1074-443_1074-442insACACACACACACACACACACACACACAC ACAC	CYP4B1	ENSG00000142973.16	transcript	ENST00000371923.9	protein_coding	8/11		INFO_REALIGN_3_PRIME	chr1	TogoVar
CYP4F11_chr19_15907377_15939529	15932896	G G	GTGAGCGG others(25): Show GTGAGCGGAGAGGAATGATGAGCGGGAGAGGAA	intron_variant intron_variant	MODIFIER	NA19084.hp1 NA19084.hp1	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0184 a0002c0001t0184	a0002c0001t0184g0361 a0002c0001t0184g0361	1	386	0.0026	32	c.198 others(49): Show c.198+1314_198+1315insTTCCTCTCCCGCTCATCATTCCTCTCCG CTCA	CYP4F11	ENSG00000171903.17	transcript	ENST00000402119.9	protein_coding	1/11			chr19	TogoVar
CYP4F22_chr19_15503525_15557317	15509892	C C	CCTTTCTT others(25): Show CCTTTCTTTCTTTCTTTCCTTCCTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG01071.hp1 HG01071.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0186 a0001c0001t0004g0186	1	384	0.0026	32	c.-10 others(51): Show c.-109+1312_-109+1313insTCTTTCTTTCTTTCCTTCCTTCTTTC TTTCTT	CYP4F22	ENSG00000171954.13	transcript	ENST00000269703.8	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr19	TogoVar
CYP4F22_chr19_15503525_15557317	15509904	C C	CCTTCCTT others(25): Show CCTTCCTTCCTTCCTTTCTTTCCTTCCTTCTTT	intron_variant intron_variant	MODIFIER	HG03017.hp2 NA18747.hp1 HG03017.hp2 NA18747.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0001 a0001c0001t0004	a0001c0001t0001g0035 a0001c0001t0004g0034 a0001c0001t0001g0035 a0001c0001t0004g0034	2	384	0.0052	32	c.-10 others(51): Show c.-109+1324_-109+1325insCCTTCCTTCCTTTCTTTCCTTCCTTC TTTCTT	CYP4F22	ENSG00000171954.13	transcript	ENST00000269703.8	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr19	TogoVar
CYP4F22_chr19_15503525_15557317	15509904	C C	CCTTCCTT others(25): Show CCTTCCTTCCTTTCTTTCCTTCCTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG02074.hp2 HG02074.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0039 a0001c0001t0002g0039	1	384	0.0026	32	c.-10 others(51): Show c.-109+1324_-109+1325insCCTTCCTTTCTTTCCTTCCTTCTTTC TTTCTT	CYP4F22	ENSG00000171954.13	transcript	ENST00000269703.8	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr19	TogoVar
CYP4F22_chr19_15503525_15557317	15509904	C C	CCTTCCTT others(25): Show CCTTCCTTTCCTTCCTTCCTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG03688.hp2 HG03688.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0062 a0001c0001t0005g0062	1	384	0.0026	32	c.-10 others(51): Show c.-109+1324_-109+1325insCCTTTCCTTCCTTCCTTCTTTCTTTC TTTCTT	CYP4F22	ENSG00000171954.13	transcript	ENST00000269703.8	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr19	TogoVar
CYP4F22_chr19_15503525_15557317	15509904	C C	CCTTTCTT others(25): Show CCTTTCTTTCCTTCCTTCTTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG02273.hp2 homoSapiens_chm13v2.hp1 HG00280.hp2 HG02273.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0002g0117 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0002g0117	3	384	0.0078	32	c.-10 others(51): Show c.-109+1330_-109+1331insCTTCCTTCTTTCTTTCTTTCTTTCTT TCTTTC	CYP4F22	ENSG00000171954.13	transcript	ENST00000269703.8	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr19	TogoVar
CYP4F22_chr19_15503525_15557317	15509906	T T	TTCCTTCC others(25): Show TTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCC	intron_variant intron_variant	MODIFIER	NA19085.hp2 NA19085.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0028 a0001c0001t0002g0028	1	384	0.0026	32	c.-10 others(51): Show c.-109+1324_-109+1325insCCTTCCTTCCTTCCTTCCTTCCTTTC TTTCCT	CYP4F22	ENSG00000171954.13	transcript	ENST00000269703.8	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr19	TogoVar
CYP4F22_chr19_15503525_15557317	15509922	C C	CTTCTTTC others(25): Show CTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG02735.hp1 HG03490.hp2 HG01884.hp1 HG02735.hp1 HG03490.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0064 a0001c0001t0002g0290 a0001c0001t0002g0370 a0001c0001t0002g0064 a0001c0001t0002g0290 a0001c0001t0002g0370	3	384	0.0078	32	c.-10 others(51): Show c.-109+1365_-109+1366insCTTTCTTTCTTTCTTTCTTTCTTTCT TTCTTT	CYP4F22	ENSG00000171954.13	transcript	ENST00000269703.8	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr19	TogoVar
CYP4F22_chr19_15503525_15557317	15510966	A A	ATATATAT others(25): Show ATATATATATATATATATATATATATATATATT	intron_variant intron_variant	MODIFIER	NA20300.hp2 NA20300.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0027 a0001c0002t0003g0027	1	384	0.0026	32	c.-10 others(51): Show c.-109+2384_-109+2385insATATATATATATATATATATATATAT ATATTT	CYP4F22	ENSG00000171954.13	transcript	ENST00000269703.8	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr19	TogoVar
CYP4F3_chr19_15635897_15667825	15650785	T T	TTCTTTCT others(25): Show TTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTC	intron_variant intron_variant	MODIFIER	HG02970.hp2 HG02970.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0187 a0001c0001t0010g0187	1	424	0.0024	32	c.918 others(47): Show c.918+617_918+618insTTCTTTCTTTCTTCTTCTCTTTCTTTCTTT CT	CYP4F3	ENSG00000186529.16	transcript	ENST00000221307.13	protein_coding	7/12		INFO_REALIGN_3_PRIME	chr19	TogoVar
CYP4F8_chr19_15610218_15635639	15629015	T T	TGGGGGGG others(25): Show TGGGGGGGGGGGGGGGGGGGGGGGGCTGGGGGG	intron_variant intron_variant	MODIFIER	HG03942.hp2 HG03942.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0004 a0001c0004t0004	a0001c0004t0004g0074 a0001c0004t0004g0074	1	412	0.0024	32	c.139 others(49): Show c.1398-174_1398-173insGGGGGGGGGGGGGGGGGGGGCTGGGGGG GGGG	CYP4F8	ENSG00000186526.13	transcript	ENST00000612078.5	protein_coding	12/12		INFO_REALIGN_3_PRIME	chr19	TogoVar
CYP4F8_chr19_15610218_15635639	15633714	G G	GGTATCAT others(25): Show GGTATCATTTGTCTTCATACAAGTGACAGTTGA	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18965.hp1 NA18965.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0006 a0001c0002t0002g0006	1	412	0.0024	32	c.43 others(43): Show c.4356_*4357insGTATCATTTGTCTTCATACAAGTGACAGTTGA	CYP4F8	ENSG00000186526.13	transcript	ENST00000612078.5	protein_coding		3076		chr19	TogoVar
CYP4V2_chr4_186186567_186218463	186204224	T T	TTACGCTG others(25): Show TTACGCTGGCGTAAGACGTGGCGGTGGAGACGC	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG02451.hp1 HG02055.hp2 HG02451.hp1	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0026 a0002c0001t0026	a0002c0001t0026g0039 a0002c0001t0026g0039	2	452	0.0044	32	c.988 others(47): Show c.988-961_988-960insCGTGGCGGTGGAGACGCTACGCTGGCGTAA GA	CYP4V2	ENSG00000145476.16	transcript	ENST00000378802.5	protein_coding	7/10		INFO_REALIGN_3_PRIME	chr4	TogoVar

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