Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
HDAC3_chr5_141615881_141641849	141632794	G G	GGTGTGAA others(26): Show GGTGTGAAGAGGTTGAATAGAGAAGAGGTTGAAT	intron_variant intron_variant	MODIFIER	NA18964.hp1 NA19074.hp1 NA18964.hp1 NA19074.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0080 a0001c0002t0001g0081 a0001c0002t0001g0080 a0001c0002t0001g0081	2	386	0.0052	33	c.281 others(50): Show c.281+2016_281+2017insATTCAACCTCTTCTCTATTCAACCTCTT CACAC	HDAC3	ENSG00000171720.10	transcript	ENST00000305264.8	protein_coding	3/14			chr5	TogoVar
HDAC9_chr7_18490749_19007416	18824044	G G	GGAAGAGG others(26): Show GGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAA	intron_variant intron_variant	MODIFIER	HG03540.hp1 HG03540.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0009 a0001c0004t0009	a0001c0004t0009g0131 a0001c0004t0009g0131	1	39	0.0256	33	c.232 others(52): Show c.2323-5112_2323-5111insGGAAGAAGAAGAAGAAGAAGAAGAAG AAGAAGA	HDAC9	ENSG00000048052.25	transcript	ENST00000686413.1	protein_coding	17/25		INFO_REALIGN_3_PRIME	chr7	TogoVar
HDAC9_chr7_18490749_19007416	18824044	G G	GGAAGAGG others(26): Show GGAAGAGGAAGAGGAAGAAGAAGAAGAAGAAGAA	intron_variant intron_variant	MODIFIER	HG00438.hp1 NA18984.hp1 NA18984.hp2 others(2): Show HG00438.hp1 NA18984.hp1 NA18984.hp2 NA19056.hp2 NA19082.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0001t0005 a0001c0001t0028 others(2): Show a0001c0001t0002 a0001c0001t0005 a0001c0001t0028 a0001c0001t0048 a0001c0002t0003	a0001c0001t0002g0036 a0001c0001t0005g0120 a0001c0001t0028g0069 others(2): Show a0001c0001t0002g0036 a0001c0001t0005g0120 a0001c0001t0028g0069 a0001c0001t0048g0087 a0001c0002t0003g0116	5	43	0.1163	33	c.232 others(52): Show c.2323-5112_2323-5111insGGAAGAGGAAGAAGAAGAAGAAGAAG AAGAAGA	HDAC9	ENSG00000048052.25	transcript	ENST00000686413.1	protein_coding	17/25		INFO_REALIGN_3_PRIME	chr7	TogoVar
HEATR5B_chr2_36975895_37089372	36984215	A A	AAAAAAAA others(26): Show AAAAAAAAAAAAAAATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00280.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0276 a0001c0002t0001g0276	1	153	0.0065	33	c.591 others(52): Show c.5912-2422_5912-2421insATATATATATATATATATATTTTTTT TTTTTTT	HEATR5B	ENSG00000008869.12	transcript	ENST00000233099.6	protein_coding	35/35			chr2	TogoVar
HEATR5B_chr2_36975895_37089372	36984215	A A	AAAAAAAA others(26): Show AAAAAAAAAAATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18981.hp1 NA18981.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0221 a0001c0002t0001g0221	1	153	0.0065	33	c.591 others(52): Show c.5912-2422_5912-2421insATATATATATATATATATATATATTT TTTTTTT	HEATR5B	ENSG00000008869.12	transcript	ENST00000233099.6	protein_coding	35/35			chr2	TogoVar
HEATR5B_chr2_36975895_37089372	36984215	A A	AAAAAAAA others(26): Show AAAAAAAAATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18968.hp2 NA18968.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0220 a0001c0002t0001g0220	1	153	0.0065	33	c.591 others(52): Show c.5912-2422_5912-2421insATATATATATATATATATATATATAT TTTTTTT	HEATR5B	ENSG00000008869.12	transcript	ENST00000233099.6	protein_coding	35/35			chr2	TogoVar
HEATR6_chr17_60036008_60083921	60048985	T T	TATATATA others(26): Show TATATATATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	NA18982.hp1 NA18982.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0019 a0001c0001t0001g0019	1	248	0.0040	33	c.254 others(50): Show c.2547+562_2547+594dupTATATATATATATATATATATATATATA TATAT	HEATR6	ENSG00000068097.16	transcript	ENST00000184956.11	protein_coding	16/19			chr17	TogoVar
HECW1_chr7_43107647_43571001	43430779	T T	TTTATTAT others(26): Show TTTATTATTATTATTATTATTATTATTATTATTA	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG01517.hp1 HG00639.hp1 HG01517.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0002 a0001c0003t0001 a0001c0003t0002	a0001c0003t0001g0155 a0001c0003t0002g0018 a0001c0003t0001g0155 a0001c0003t0002g0018	2	51	0.0392	33	c.802 others(50): Show c.802-7204_802-7203insATTATTATTATTATTATTATTATTATTA TTATT	HECW1	ENSG00000002746.15	transcript	ENST00000395891.7	protein_coding	8/29		INFO_REALIGN_3_PRIME	chr7	TogoVar
HELB_chr12_66297493_66343199	66327066	A A	AAAAATAT others(26): Show AAAAATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18993.hp1 NA18993.hp1	a0024 a0024	a0024c0040 a0024c0040	a0024c0040t0002 a0024c0040t0002	a0024c0040t0002g0193 a0024c0040t0002g0193	1	55	0.0182	33	c.267 others(52): Show c.2670+1941_2670+1942insAAATATATATATATATATATATATAT ATATATA	HELB	ENSG00000127311.10	transcript	ENST00000247815.9	protein_coding	11/12		INFO_REALIGN_3_PRIME	chr12	TogoVar
HELB_chr12_66297493_66343199	66327066	A A	ATATATAT others(26): Show ATATATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03688.hp2 HG03688.hp2	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0002 a0002c0001t0002	a0002c0001t0002g0199 a0002c0001t0002g0199	1	55	0.0182	33	c.267 others(52): Show c.2670+1940_2670+1941insTATATATATATATATATATATATATA TATATAT	HELB	ENSG00000127311.10	transcript	ENST00000247815.9	protein_coding	11/12			chr12	TogoVar
HERC4_chr10_67916905_68080283	68059669	T T	TATAATAT others(26): Show TATAATATTATATATCATCATATTATATATTATA	intron_variant intron_variant	MODIFIER	HG02040.hp1 HG02040.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0184 a0001c0001t0001g0184	1	241	0.0041	33	c.226 others(52): Show c.226+13213_226+13214insTATAATATATAATATGATGATATATA ATATTAT	HERC4	ENSG00000148634.16	transcript	ENST00000373700.9	protein_coding	3/24			chr10	TogoVar
HEY1_chr8_79759010_79772767	79769371	A A	ATCTTTTT others(26): Show ATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02615.hp2 HG02647.hp2 HG03579.hp2 others(2): Show HG02615.hp2 HG02647.hp2 HG03579.hp2 HG06807.hp2 NA18522.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0006 a0001c0001t0007 others(1): Show a0001c0001t0001 a0001c0001t0006 a0001c0001t0007 a0001c0001t0009	a0001c0001t0001g0008 a0001c0001t0006g0013 a0001c0001t0007g0014 others(1): Show a0001c0001t0001g0008 a0001c0001t0006g0013 a0001c0001t0007g0014 a0001c0001t0009g0018	5	242	0.0207	33	c.-17 others(44): Show c.-1709_-1708insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGA	HEY1	ENSG00000164683.19	transcript	ENST00000354724.8	protein_coding		1605		chr8	TogoVar
HINFP_chr11_119116580_119141059	119129490	C C	CTTTTTTT others(26): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01346.hp1 HG02683.hp2 HG04184.hp1 others(1): Show HG01346.hp1 HG02683.hp2 HG04184.hp1 HG04199.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0047 a0001c0001t0003g0163 a0001c0001t0003g0190 a0001c0001t0003g0047 a0001c0001t0003g0163 a0001c0001t0003g0190	4	286	0.0140	33	c.182 others(50): Show c.182-1220_182-1219insTTTTTTTTTTTTTTTTTTTTTTTTTTTT TTTTT	HINFP	ENSG00000172273.13	transcript	ENST00000350777.7	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr11	TogoVar
HIVEP1_chr6_12007312_12169999	12009120	T T	TGGCGGCG others(26): Show TGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGC	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18951.hp1 NA18951.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0023 a0002c0002t0001g0023	1	314	0.0032	33	c.-35 others(44): Show c.-3550_-3549insGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGC	HIVEP1	ENSG00000095951.17	transcript	ENST00000379388.7	protein_coding		3191		chr6	TogoVar
HIVEP1_chr6_12007312_12169999	12168033	T T	TACATATG others(26): Show TACATATGTGTATATATACATATATACATATGTG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02895.hp2 HG02895.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0260 a0002c0002t0001g0260	1	296	0.0034	33	c.35 others(44): Show c.3572_*3573insACATATGTGTATATATACATATATACATATGTG	HIVEP1	ENSG00000095951.17	transcript	ENST00000379388.7	protein_coding		3035		chr6	TogoVar
HIVEP1_chr6_12007312_12169999	12168199	T T	TCTATATT others(26): Show TCTATATTATATATAGATATACGTGTATATATAC	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18971.hp2 NA18992.hp1 NA18971.hp2 NA18992.hp1	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0001 a0004c0004t0001	a0004c0004t0001g0008 a0004c0004t0001g0116 a0004c0004t0001g0008 a0004c0004t0001g0116	2	342	0.0058	33	c.37 others(44): Show c.3738_*3739insCTATATTATATATAGATATACGTGTATATATAC	HIVEP1	ENSG00000095951.17	transcript	ENST00000379388.7	protein_coding		3201		chr6	TogoVar
HIVEP2_chr6_142746469_142950176	142793673	T T	TTCTTTCT others(26): Show TTCTTTCTTTTTTTTTTCTTTCTTTCTTTCTCTC	intron_variant intron_variant	MODIFIER	NA18747.hp2 NA18747.hp2	a0002 a0002	a0002c0010 a0002c0010	a0002c0010t0007 a0002c0010t0007	a0002c0010t0007g0114 a0002c0010t0007g0114	1	154	0.0065	33	c.-52 others(54): Show c.-527-10059_-527-10058insGAGAGAAAGAAAGAAAGAAAAAAA AAAGAAAGA	HIVEP2	ENSG00000010818.11	transcript	ENST00000367603.8	protein_coding	2/9			chr6	TogoVar
HIVEP2_chr6_142746469_142950176	142793673	T T	TTCTTTTT others(26): Show TTCTTTTTTTTTTCTTTCTTTCTTTCTCTCTCTC	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG01943.hp2 NA18747.hp1 others(5): Show HG00735.hp1 HG01943.hp2 NA18747.hp1 NA18942.hp1 NA18999.hp1 NA18999.hp2 NA19004.hp2 NA19068.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0010 a0001c0001 a0001c0002 a0002c0010	a0001c0001t0001 a0001c0002t0002 a0002c0010t0007 a0001c0001t0001 a0001c0002t0002 a0002c0010t0007	a0001c0001t0001g0014 a0001c0001t0001g0067 a0001c0001t0001g0091 others(5): Show a0001c0001t0001g0014 a0001c0001t0001g0067 a0001c0001t0001g0091 a0001c0001t0001g0236 a0001c0001t0001g0249 a0001c0002t0002g0241 a0001c0002t0002g0246 a0002c0010t0007g0057	8	161	0.0497	33	c.-52 others(54): Show c.-527-10059_-527-10058insGAGAGAGAGAAAGAAAGAAAGAAA AAAAAAAGA	HIVEP2	ENSG00000010818.11	transcript	ENST00000367603.8	protein_coding	2/9			chr6	TogoVar
HIVEP2_chr6_142746469_142950176	142793673	T T	TTTTTTTT others(26): Show TTTTTTTTTCTTTCTTTCTTTCTCTCTCTCTCTC	intron_variant intron_variant	MODIFIER	NA18954.hp2 NA18954.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0228 a0001c0001t0001g0228	1	154	0.0065	33	c.-52 others(54): Show c.-527-10059_-527-10058insGAGAGAGAGAGAGAAAGAAAGAAA GAAAAAAAA	HIVEP2	ENSG00000010818.11	transcript	ENST00000367603.8	protein_coding	2/9			chr6	TogoVar
HIVEP3_chr1_41501365_41923922	41544868	C C	CACCACTA others(26): Show CACCACTACCACCTCTACCACCTCTACCACCACG	intron_variant intron_variant	MODIFIER	HG02040.hp1 HG02040.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0008 a0002c0002t0008	a0002c0002t0008g0127 a0002c0002t0008g0127	1	123	0.0081	33	c.520 others(54): Show c.5208-19959_5208-19958insCGTGGTGGTAGAGGTGGTAGAGGT GGTAGTGGT	HIVEP3	ENSG00000127124.16	transcript	ENST00000372583.6	protein_coding	5/8			chr1	TogoVar
HK1_chr10_69273496_69406882	69276118	A A	AAAAAAAA others(26): Show AAAAAAAAATATATATATATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03927.hp1 HG03927.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0103 a0001c0001t0002g0103	1	71	0.0141	33	c.-28 others(44): Show c.-2863_-2862insAAAAAAAATATATATATATATATATATATATAT	HK1	ENSG00000156515.25	transcript	ENST00000643399.2	protein_coding		2377		chr10	TogoVar
HLA-DQB1_chr6_32654467_32671657	32662461	G G	GTAACATA others(26): Show GTAACATAATTTACTTTATAGAATTTACTTTATA	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG00673.hp1 HG02683.hp2 others(42): Show HG00423.hp1 HG00673.hp1 HG02683.hp2 HG02698.hp1 HG03017.hp1 HG03490.hp1 HG03669.hp1 HG03688.hp1 HG03831.hp2 HG04228.hp2 NA18940.hp1 NA18943.hp1 NA18947.hp1 NA18947.hp2 NA18950.hp2 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18956.hp1 NA18957.hp1 NA18959.hp2 NA18962.hp2 NA18973.hp1 NA18979.hp1 NA18980.hp1 NA18982.hp1 NA18984.hp2 NA18987.hp1 NA18992.hp1 NA18998.hp1 NA19001.hp2 NA19003.hp2 NA19004.hp1 NA19007.hp1 NA19009.hp1 NA19056.hp1 NA19058.hp1 NA19064.hp1 NA19070.hp1 NA19074.hp1 NA19078.hp1 NA19081.hp1 NA19084.hp1 NA19085.hp1 NA20905.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0003 a0003c0003t0003	a0003c0003t0003g0001 a0003c0003t0003g0049 a0003c0003t0003g0050 a0003c0003t0003g0001 a0003c0003t0003g0049 a0003c0003t0003g0050	45	400	0.1125	33	c.380 others(48): Show c.380-214_380-213insTATAAAGTAAATTCTATAAAGTAAATTATG TTA	HLA-DQB1	ENSG00000179344.17	transcript	ENST00000434651.7	protein_coding	2/4			chr6	TogoVar
HLA-F_chr6_29718434_29732296	29722768	G G	GGAAGAGG others(26): Show GGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG04184.hp1 NA19062.hp2 NA19086.hp2 others(1): Show HG04184.hp1 NA19062.hp2 NA19086.hp2 NA19089.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0004 a0001c0001t0001g0012 a0001c0001t0001g0004 a0001c0001t0001g0012	4	423	0.0095	33	c.-69 others(42): Show c.-696_-695insGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAA	HLA-F	ENSG00000204642.14	transcript	ENST00000259951.12	protein_coding		665		chr6	TogoVar
HLA-F_chr6_29718434_29732296	29722774	G G	GGAAGAAG others(26): Show GGAAGAAGAAGAAGAAAAAGAAGAAGAAGAAGAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01516.hp1 HG01516.hp1	a0008 a0008	a0008c0012 a0008c0012	a0008c0012t0001 a0008c0012t0001	a0008c0012t0001g0004 a0008c0012t0001g0004	1	295	0.0034	33	c.-69 others(42): Show c.-690_-689insGAAGAAGAAGAAGAAAAAGAAGAAGAAGAAGAA	HLA-F	ENSG00000204642.14	transcript	ENST00000259951.12	protein_coding		659		chr6	TogoVar
HLA-F_chr6_29718434_29732296	29722774	G G	GGAAGAAG others(26): Show GGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18990.hp2 NA19086.hp1 NA18990.hp2 NA19086.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	2	296	0.0068	33	c.-69 others(42): Show c.-690_-689insGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA	HLA-F	ENSG00000204642.14	transcript	ENST00000259951.12	protein_coding		659		chr6	TogoVar
HLA-F_chr6_29718434_29732296	29722795	A A	AGAGGAAG others(26): Show AGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03654.hp1 HG03654.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0004 a0001c0001t0001g0004	1	406	0.0025	33	c.-66 others(42): Show c.-669_-668insGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAG	HLA-F	ENSG00000204642.14	transcript	ENST00000259951.12	protein_coding		638		chr6	TogoVar
HLA-F_chr6_29718434_29732296	29722807	A A	AGAAGAAG others(26): Show AGAAGAAGAAGAAGAAGAAGAGGAAGAGGAAGAG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01123.hp2 HG01123.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0004 a0001c0001t0001g0004	1	390	0.0026	33	c.-65 others(42): Show c.-657_-656insGAAGAAGAAGAAGAAGAAGAGGAAGAGGAAGAG	HLA-F	ENSG00000204642.14	transcript	ENST00000259951.12	protein_coding		626		chr6	TogoVar
HLA-F_chr6_29718434_29732296	29722807	A A	AGAAGAAG others(26): Show AGAAGAAGAGGAAGAGGAAGAGGAAGAGGAAGAG	upstream_gene_variant upstream_gene_variant	MODIFIER	NA21309.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0024 a0001c0001t0001g0024	1	390	0.0026	33	c.-65 others(42): Show c.-657_-656insGAAGAAGAGGAAGAGGAAGAGGAAGAGGAAGAG	HLA-F	ENSG00000204642.14	transcript	ENST00000259951.12	protein_coding		626		chr6	TogoVar
HLA-F_chr6_29718434_29732296	29722810	A A	AGAAGAAG others(26): Show AGAAGAAGAGGAAGAGGAAGAGGAAGAGGAAGAG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01074.hp2 HG01074.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0004 a0001c0001t0001g0004	1	386	0.0026	33	c.-65 others(42): Show c.-654_-653insGAAGAAGAGGAAGAGGAAGAGGAAGAGGAAGAG	HLA-F	ENSG00000204642.14	transcript	ENST00000259951.12	protein_coding		623		chr6	TogoVar
HLA-F_chr6_29718434_29732296	29722810	A A	AGAGGAAG others(26): Show AGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02572.hp1 HG02572.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0010 a0001c0001t0001g0010	1	386	0.0026	33	c.-65 others(42): Show c.-654_-653insGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAG	HLA-F	ENSG00000204642.14	transcript	ENST00000259951.12	protein_coding		623		chr6	TogoVar
HMCN2_chr9_130260760_130439123	130312539	C C	CCCTCCCT others(26): Show CCCTCCCTCCCCTCCCTCCCTCCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG03688.hp2 HG03688.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0053 a0001c0003t0001g0053	1	117	0.0085	33	c.235 others(52): Show c.2350+2479_2350+2480insCTCCCTCCCCTCCCTCCCTCCTTTCT TTCTTTC	HMCN2	ENSG00000148357.18	transcript	ENST00000683500.2	protein_coding	15/97		INFO_REALIGN_3_PRIME	chr9	TogoVar
HMGCLL1_chr6_55429373_55584192	55477276	T T	TTATATTT others(26): Show TTATATTTAGATAATATATATTATATAAATATAA	intron_variant intron_variant	MODIFIER	NA19001.hp1 NA19001.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0201 a0001c0001t0001g0201	1	274	0.0036	33	c.795 others(52): Show c.795+18142_795+18143insTTATATTTATATAATATATATTATCT AAATATA	HMGCLL1	ENSG00000146151.14	transcript	ENST00000274901.9	protein_coding	7/8			chr6	TogoVar
HMGCLL1_chr6_55429373_55584192	55477276	T T	TTATATTT others(26): Show TTATATTTAGATAATATATATTATATTAATATAA	intron_variant intron_variant	MODIFIER	NA19085.hp1 NA19085.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0172 a0001c0001t0001g0172	1	274	0.0036	33	c.795 others(52): Show c.795+18142_795+18143insTTATATTAATATAATATATATTATCT AAATATA	HMGCLL1	ENSG00000146151.14	transcript	ENST00000274901.9	protein_coding	7/8			chr6	TogoVar
HMGN1_chr21_39337315_39354088	39337386	A A	ATATATAT others(26): Show ATATATATATATATATATATATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19240.hp1 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0038 a0001c0001t0006g0038	1	405	0.0025	33	c.57 others(44): Show c.5725_*5726insATATATATATATATATATATATATATATATATA	HMGN1	ENSG00000205581.11	transcript	ENST00000380749.10	protein_coding		4928		chr21	TogoVar
HMGXB4_chr22_35252493_35300807	35295752	T T	TAAAGAAA others(26): Show TAAAGAAATAAAATTTTGTACTTATATTATTAAA	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02080.hp2 HG02080.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0011 a0002c0002t0011	a0002c0002t0011g0080 a0002c0002t0011g0080	1	340	0.0029	33	c.21 others(44): Show c.2104_*2136dupAGAAATAAAATTTTGTACTTATATTATTAAAAA	HMGXB4	ENSG00000100281.14	transcript	ENST00000216106.6	protein_coding	11/11	2137	INFO_REALIGN_3_PRIME	chr22	TogoVar
HMHB1_chr5_143807161_143825716	143820318	T T	TAAAAAAA others(26): Show TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG01255.hp1 HG01928.hp2 others(1): Show HG00735.hp2 HG01255.hp1 HG01928.hp2 HG01978.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0025 a0001c0002t0001g0025	4	23	0.1739	33	c.38- others(46): Show c.38-130_38-129insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA A	HMHB1	ENSG00000158497.6	transcript	ENST00000289448.4	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr5	TogoVar
HNRNPAB_chr5_178199533_178216163	178203504	T T	TAAAAAAA others(26): Show TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18971.hp1 NA19089.hp2 NA18971.hp1 NA19089.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0002 a0001c0001t0002g0001 a0001c0001t0001g0002 a0001c0001t0002g0001	2	52	0.0385	33	c.-12 others(44): Show c.-1260_-1259insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	HNRNPAB	ENSG00000197451.12	transcript	ENST00000358344.8	protein_coding		1028		chr5	TogoVar
HOMER2_chr15_82843983_82957720	82860949	T T	TGAGAGAG others(26): Show TGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	NA18612.hp1 NA19087.hp1 NA18612.hp1 NA19087.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0096 a0001c0001t0001g0241 a0001c0001t0001g0096 a0001c0001t0001g0241	2	192	0.0104	33	c.388 others(50): Show c.388-1815_388-1814insCTCTCTCTCTCTCTCTCTCTCTCTCTCT CTCTC	HOMER2	ENSG00000103942.13	transcript	ENST00000450735.7	protein_coding	4/8			chr15	TogoVar
HOMER2_chr15_82843983_82957720	82860982	A A	AGAGAGAG others(26): Show AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	NA19043.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0006 a0001c0001t0001g0006	1	333	0.0030	33	c.388 others(50): Show c.388-1848_388-1847insCTCTCTCTCTCTCTCTCTCTCTCTCTCT CTCTC	HOMER2	ENSG00000103942.13	transcript	ENST00000450735.7	protein_coding	4/8			chr15	TogoVar
HOMER2_chr15_82843983_82957720	82868541	A A	ATATATAT others(26): Show ATATATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA19060.hp2 NA19060.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0109 a0001c0001t0001g0109	1	281	0.0036	33	c.295 others(50): Show c.295-4283_295-4282insATATATATATATATATATATATATATAT ATATA	HOMER2	ENSG00000103942.13	transcript	ENST00000450735.7	protein_coding	3/8			chr15	TogoVar
HOMER2_chr15_82843983_82957720	82868541	A A	ATATATAT others(26): Show ATATATATATATATATATATATATATATATATTT	intron_variant intron_variant	MODIFIER	HG01952.hp2 HG01952.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0264 a0001c0001t0001g0264	1	281	0.0036	33	c.295 others(50): Show c.295-4283_295-4282insAAATATATATATATATATATATATATAT ATATA	HOMER2	ENSG00000103942.13	transcript	ENST00000450735.7	protein_coding	3/8			chr15	TogoVar
HOMER2_chr15_82843983_82957720	82868541	A A	ATATATAT others(26): Show ATATATATATATATATATATATATATATATTTTT	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG01243.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0295 a0001c0001t0001g0295	1	281	0.0036	33	c.295 others(50): Show c.295-4283_295-4282insAAAAATATATATATATATATATATATAT ATATA	HOMER2	ENSG00000103942.13	transcript	ENST00000450735.7	protein_coding	3/8			chr15	TogoVar
HOMER2_chr15_82843983_82957720	82868542	T T	TATATATA others(26): Show TATATATATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01943.hp1 HG04204.hp1 HG01943.hp1 HG04204.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0001 a0001c0001t0004	a0001c0001t0001g0104 a0001c0001t0004g0302 a0001c0001t0001g0104 a0001c0001t0004g0302	2	292	0.0068	33	c.295 others(50): Show c.295-4284_295-4283insTATATATATATATATATATATATATATA TATAT	HOMER2	ENSG00000103942.13	transcript	ENST00000450735.7	protein_coding	3/8			chr15	TogoVar
HOMER2_chr15_82843983_82957720	82927245	T T	TTTGTTTT others(26): Show TTTGTTTTTTTCATAATAAGTTTTCTTATTATTA	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG02280.hp2 HG02630.hp2 others(1): Show HG01243.hp1 HG02280.hp2 HG02630.hp2 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0319 a0001c0001t0001g0320 a0001c0001t0001g0321 others(1): Show a0001c0001t0001g0319 a0001c0001t0001g0320 a0001c0001t0001g0321 a0001c0001t0001g0322	4	346	0.0116	33	c.5+2 others(48): Show c.5+25285_5+25286insTAATAATAAGAAAACTTATTATGAAAAAAA CAA	HOMER2	ENSG00000103942.13	transcript	ENST00000450735.7	protein_coding	1/8			chr15	TogoVar
HORMAD2_chr22_30075464_30182075	30175237	T T	TTATATAT others(26): Show TTATATATAATATAATATAGAATATATATAATAA	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00323.hp2 HG00423.hp2 others(146): Show HG00323.hp1 HG00323.hp2 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00558.hp2 HG00597.hp1 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00733.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01070.hp2 HG01074.hp1 HG01081.hp1 HG01081.hp2 HG01123.hp1 HG01167.hp2 HG01168.hp2 HG01175.hp1 HG01192.hp2 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01361.hp1 HG01433.hp1 HG01433.hp2 HG01928.hp1 HG01943.hp2 HG01978.hp1 HG02027.hp1 HG02027.hp2 HG02040.hp2 HG02056.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02109.hp1 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02135.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp2 HG02257.hp2 HG02258.hp2 HG02273.hp2 HG02293.hp1 HG02300.hp1 HG02451.hp1 HG02486.hp2 HG02523.hp1 HG02602.hp1 HG02602.hp2 HG02615.hp2 HG02683.hp2 HG02735.hp2 HG02738.hp1 HG02886.hp2 HG02976.hp1 HG03098.hp2 HG03139.hp1 HG03139.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp1 HG03490.hp2 HG03654.hp1 HG03831.hp1 HG03942.hp2 HG04115.hp2 HG04204.hp2 NA18612.hp1 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18906.hp1 NA18942.hp1 NA18942.hp2 NA18943.hp1 NA18943.hp2 NA18948.hp2 NA18949.hp1 NA18950.hp1 NA18950.hp2 NA18951.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18956.hp2 NA18957.hp2 NA18959.hp2 NA18964.hp1 NA18964.hp2 NA18967.hp1 NA18967.hp2 NA18968.hp1 NA18969.hp1 NA18971.hp2 NA18973.hp1 NA18975.hp1 NA18975.hp2 NA18977.hp1 NA18977.hp2 NA18978.hp1 NA18979.hp2 NA18980.hp1 NA18983.hp1 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18986.hp2 NA18989.hp2 NA18990.hp2 NA19001.hp1 NA19001.hp2 NA19005.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19012.hp1 NA19056.hp2 NA19058.hp1 NA19059.hp2 NA19060.hp1 NA19062.hp2 NA19064.hp1 NA19064.hp2 NA19072.hp2 NA19075.hp2 NA19077.hp2 NA19081.hp1 NA19084.hp1 NA19085.hp2 NA20129.hp1 NA20752.hp2 NA20805.hp2 NA21309.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0004 a0001c0001 a0003c0004	a0001c0001t0001 a0003c0004t0001 a0001c0001t0001 a0003c0004t0001	a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0006 others(144): Show a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0008 a0001c0001t0001g0162 a0001c0001t0001g0164 a0001c0001t0001g0165 a0001c0001t0001g0166 a0001c0001t0001g0167 a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0170 a0001c0001t0001g0171 a0001c0001t0001g0173 a0001c0001t0001g0174 a0001c0001t0001g0175 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0178 a0001c0001t0001g0179 a0001c0001t0001g0180 a0001c0001t0001g0182 a0001c0001t0001g0183 a0001c0001t0001g0184 a0001c0001t0001g0185 a0001c0001t0001g0186 a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0189 a0001c0001t0001g0190 a0001c0001t0001g0191 a0001c0001t0001g0192 a0001c0001t0001g0193 a0001c0001t0001g0195 a0001c0001t0001g0196 a0001c0001t0001g0197 a0001c0001t0001g0198 a0001c0001t0001g0200 a0001c0001t0001g0201 a0001c0001t0001g0202 a0001c0001t0001g0203 a0001c0001t0001g0204 a0001c0001t0001g0205 a0001c0001t0001g0206 a0001c0001t0001g0207 a0001c0001t0001g0208 a0001c0001t0001g0209 a0001c0001t0001g0210 a0001c0001t0001g0211 a0001c0001t0001g0213 a0001c0001t0001g0214 a0001c0001t0001g0215 a0001c0001t0001g0216 a0001c0001t0001g0217 a0001c0001t0001g0218 a0001c0001t0001g0221 a0001c0001t0001g0222 a0001c0001t0001g0223 a0001c0001t0001g0225 a0001c0001t0001g0226 a0001c0001t0001g0227 a0001c0001t0001g0228 a0001c0001t0001g0229 a0001c0001t0001g0230 a0001c0001t0001g0231 a0001c0001t0001g0232 a0001c0001t0001g0233 a0001c0001t0001g0235 a0001c0001t0001g0236 a0001c0001t0001g0238 a0001c0001t0001g0239 a0001c0001t0001g0241 a0001c0001t0001g0242 a0001c0001t0001g0243 a0001c0001t0001g0244 a0001c0001t0001g0246 a0001c0001t0001g0247 a0001c0001t0001g0248 a0001c0001t0001g0249 a0001c0001t0001g0250 a0001c0001t0001g0251 a0001c0001t0001g0252 a0001c0001t0001g0253 a0001c0001t0001g0254 a0001c0001t0001g0255 a0001c0001t0001g0256 a0001c0001t0001g0257 a0001c0001t0001g0258 a0001c0001t0001g0259 a0001c0001t0001g0260 a0001c0001t0001g0262 a0001c0001t0001g0264 a0001c0001t0001g0265 a0001c0001t0001g0266 a0001c0001t0001g0267 a0001c0001t0001g0268 a0001c0001t0001g0269 a0001c0001t0001g0270 a0001c0001t0001g0272 a0001c0001t0001g0273 a0001c0001t0001g0274 a0001c0001t0001g0275 a0001c0001t0001g0276 a0001c0001t0001g0277 a0001c0001t0001g0278 a0001c0001t0001g0279 a0001c0001t0001g0280 a0001c0001t0001g0281 a0001c0001t0001g0282 a0001c0001t0001g0283 a0001c0001t0001g0284 a0001c0001t0001g0285 a0001c0001t0001g0286 a0001c0001t0001g0287 a0001c0001t0001g0288 a0001c0001t0001g0289 a0001c0001t0001g0290 a0001c0001t0001g0291 a0001c0001t0001g0292 a0001c0001t0001g0293 a0001c0001t0001g0294 a0001c0001t0001g0295 a0001c0001t0001g0297 a0001c0001t0001g0298 a0001c0001t0001g0299 a0001c0001t0001g0300 a0001c0001t0001g0301 a0001c0001t0001g0302 a0001c0001t0001g0303 a0001c0001t0001g0304 a0001c0001t0001g0305 a0001c0001t0001g0306 a0001c0001t0001g0307 a0001c0001t0001g0308 a0001c0001t0001g0309 a0001c0001t0001g0310 a0001c0001t0001g0311 a0001c0001t0001g0312 a0001c0001t0001g0313 a0001c0001t0001g0314 a0001c0001t0001g0315 a0001c0001t0001g0316 a0001c0001t0001g0317 a0001c0001t0001g0318 a0001c0001t0001g0319 a0001c0001t0001g0320 a0003c0004t0001g0271	149	296	0.5034	33	c.820 others(48): Show c.820-774_820-742dupGAATATATATAATAATATATATAATATAAT ATA	HORMAD2	ENSG00000176635.18	transcript	ENST00000336726.11	protein_coding	10/10		INFO_REALIGN_3_PRIME	chr22	TogoVar
HOXB8_chr17_48607346_48620292	48614225	A A	AGGCCCCC others(26): Show AGGCCCCCTGCCCGGCCTGCCAGGCCCCCTGCCC	intron_variant intron_variant	MODIFIER	NA19081.hp2 NA19081.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0043 a0001c0001t0007g0043	1	38	0.0263	33	c.424 others(46): Show c.424+55_424+56insGGGCAGGGGGCCTGGCAGGCCGGGCAGGGGGC C	HOXB8	ENSG00000120068.7	transcript	ENST00000239144.5	protein_coding	1/1			chr17	TogoVar
HOXC8_chr12_54003985_54017769	54008349	T T	TAGCAGGT others(26): Show TAGCAGGTAGCAAGAGAGTCTCCTGGATCTAAGG	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19004.hp2 NA19004.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	304	0.0033	33	c.-93 others(42): Show c.-936_-935insAGCAGGTAGCAAGAGAGTCTCCTGGATCTAAGG	HOXC8	ENSG00000037965.6	transcript	ENST00000040584.6	protein_coding		635		chr12	TogoVar
HOXC8_chr12_54003985_54017769	54014000	T T	TTCTCTTC others(26): Show TTCTCTTCTCTTCTCTTCTTTCTCTCTCTCTCTC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02572.hp1 HG02572.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0028 a0001c0001t0028	a0001c0001t0028g0001 a0001c0001t0028g0001	1	146	0.0068	33	c.26 others(44): Show c.2619_*2620insTCTCTTCTCTTCTCTTCTTTCTCTCTCTCTCTC	HOXC8	ENSG00000037965.6	transcript	ENST00000040584.6	protein_coding		1232		chr12	TogoVar
HP1BP3_chr1_20735266_20792307	20775470	A A	AAGTTTTA others(26): Show AAGTTTTAAAAGTTTTTAAAAATAAAAACTTTTT	intron_variant intron_variant	MODIFIER	HG03209.hp2 HG03209.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0128 a0001c0001t0004g0128	1	376	0.0027	33	c.350 others(50): Show c.350+1094_350+1126dupAAAAAGTTTTTATTTTTAAAAACTTTTA AAACT	HP1BP3	ENSG00000127483.19	transcript	ENST00000438032.6	protein_coding	4/12			chr1	TogoVar
HPGDS_chr4_94293535_94347836	94340309	C C	CTTTCTTT others(26): Show CTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTT	intron_variant intron_variant	MODIFIER	NA18983.hp2 NA18983.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0128 a0001c0001t0001g0128	1	209	0.0048	33	c.-10 others(50): Show c.-10+2485_-10+2486insAAAGAAAAAGAAAGAAAGAAAGAAAGAA AGAAA	HPGDS	ENSG00000163106.11	transcript	ENST00000295256.10	protein_coding	1/5			chr4	TogoVar

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