Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
TBC1D5_chr3_17152168_17747631	17186710	C C	CAAAAAAA others(26): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02165.hp2 HG02165.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0012 a0001c0001t0012	a0001c0001t0012g0162 a0001c0001t0012g0162	1	162	0.0062	33	c.181 others(52): Show c.1819-1535_1819-1503dupTTTTTTTTTTTTTTTTTTTTTTTTTT TTTTTTT	TBC1D5	ENSG00000131374.15	transcript	ENST00000696125.1	protein_coding	19/22			chr3	TogoVar
TBC1D5_chr3_17152168_17747631	17256386	A A	ATATATAT others(26): Show ATATATATATAATATATATATAAACTCATTGTGT	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG01109.hp2 HG01891.hp1 others(19): Show HG00280.hp1 HG01109.hp2 HG01891.hp1 HG01934.hp2 HG02145.hp2 HG02280.hp2 HG02523.hp1 HG02647.hp2 HG02717.hp2 HG02896.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp2 HG03195.hp1 HG03225.hp2 HG03540.hp2 HG04184.hp2 NA18957.hp1 NA18975.hp2 NA19043.hp2 NA20129.hp1 NA20300.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0005 a0001c0001 a0003c0005	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0006 a0001c0001t0008 a0001c0001t0009 a0003c0005t0001	a0001c0001t0001g0002 a0001c0001t0001g0006 a0001c0001t0001g0046 others(19): Show a0001c0001t0001g0002 a0001c0001t0001g0006 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0050 a0001c0001t0001g0108 a0001c0001t0001g0113 a0001c0001t0001g0116 a0001c0001t0001g0117 a0001c0001t0001g0118 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0002g0121 a0001c0001t0004g0114 a0001c0001t0006g0003 a0001c0001t0006g0043 a0001c0001t0006g0110 a0001c0001t0008g0017 a0001c0001t0008g0041 a0001c0001t0008g0042 a0001c0001t0009g0079 a0003c0005t0001g0115	22	162	0.1358	33	c.133 others(52): Show c.1331+2087_1331+2119dupACACAATGAGTTTATATATATATTAT ATATATA	TBC1D5	ENSG00000131374.15	transcript	ENST00000696125.1	protein_coding	16/22			chr3	TogoVar
TBC1D5_chr3_17152168_17747631	17746264	C C	CACGTTCT others(26): Show CACGTTCTTACTCCCCAAGAGACAATCTGAGGGA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02523.hp2 HG02523.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0057 a0001c0001t0003g0057	1	162	0.0062	33	c.-39 others(44): Show c.-3917_-3885dupTCCCTCAGATTGTCTCTTGGGGAGTAAGAACGT	TBC1D5	ENSG00000131374.15	transcript	ENST00000696125.1	protein_coding		3634		chr3	TogoVar
TBC1D7_chr6_13299951_13333537	13310637	C C	CAAAAAAA others(26): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG01346.hp2 NA19089.hp1 HG01243.hp2 HG01346.hp2 NA19089.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0004 a0001c0001 a0002c0004	a0001c0001t0003 a0001c0001t0009 a0002c0004t0006 a0001c0001t0003 a0001c0001t0009 a0002c0004t0006	a0001c0001t0003g0110 a0001c0001t0009g0056 a0002c0004t0006g0118 a0001c0001t0003g0110 a0001c0001t0009g0056 a0002c0004t0006g0118	3	440	0.0068	33	c.520 others(50): Show c.520-2893_520-2892insTTTTTTTTTTTTTTTTTTTTTTTTTTTT TTTTT	TBC1D7	ENSG00000145979.18	transcript	ENST00000379300.8	protein_coding	5/7			chr6	TogoVar
TBC1D8B_chrX_106797673_106881150	106798164	T T	TCCCCCTC others(26): Show TCCCCCTCCCATTTCCAGCCCCACATCACCACCA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18961.hp1 NA18961.hp1	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0001 a0001c0006t0001	a0001c0006t0001g0043 a0001c0006t0001g0043	1	226	0.0044	33	c.-46 others(44): Show c.-4690_-4689insCCCCCTCCCATTTCCAGCCCCACATCACCACCA	TBC1D8B	ENSG00000133138.20	transcript	ENST00000357242.10	protein_coding		4508		chrX	TogoVar
TBC1D8_chr2_101002228_101156382	101054672	C C	CTTTTTTT others(26): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02602.hp1 HG02602.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0293 a0001c0001t0001g0293	1	332	0.0030	33	c.403 others(48): Show c.403-337_403-336insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAA	TBC1D8	ENSG00000204634.13	transcript	ENST00000409318.2	protein_coding	3/19			chr2	TogoVar
TBCD_chr17_82747065_82950914	82808055	C C	CCCATTCT others(26): Show CCCATTCTTCTCCCCTTTCTTTTTTTTCTTTTTT	intron_variant intron_variant	MODIFIER	NA18965.hp2 NA18965.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0105 a0001c0002t0002g0105	1	318	0.0031	33	c.114 others(50): Show c.1148+388_1148+389insCATTCTTCTCCCCTTTCTTTTTTTTCTT TTTTC	TBCD	ENSG00000141556.22	transcript	ENST00000355528.9	protein_coding	11/38		INFO_REALIGN_3_PRIME	chr17	TogoVar
TBCD_chr17_82747065_82950914	82843532	A A	ATCCAGCT others(26): Show ATCCAGCTTACTTACCCTTCCCTTCCCCTCCCCG	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG02717.hp2 HG02486.hp2 HG02717.hp2	a0002 a0002	a0002c0007 a0002c0011 a0002c0007 a0002c0011	a0002c0007t0035 a0002c0011t0002 a0002c0007t0035 a0002c0011t0002	a0002c0007t0035g0004 a0002c0011t0002g0002 a0002c0007t0035g0004 a0002c0011t0002g0002	2	318	0.0063	33	c.131 others(54): Show c.1319-26626_1319-26594dupGTCCAGCTTACTTACCCTTCCCTT CCCCTCCCC	TBCD	ENSG00000141556.22	transcript	ENST00000355528.9	protein_coding	13/38		INFO_REALIGN_3_PRIME	chr17	TogoVar
TBL1XR1_chr3_177014344_177202482	177146589	C C	CAAAAAAA others(26): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02559.hp2 HG02559.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0202 a0001c0001t0001g0202	1	306	0.0033	33	c.-12 others(54): Show c.-121-48049_-121-48048insTTTTTTTTTTTTTTTTTTTTTTTT TTTTTTTTT	TBL1XR1	ENSG00000177565.19	transcript	ENST00000457928.7	protein_coding	1/15			chr3	TogoVar
TBX1_chr22_19755778_19772334	19768953	C C	CTTTTTTT others(26): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18990.hp1 NA19065.hp1 NA18990.hp1 NA19065.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0002 a0002c0003t0001g0002	2	432	0.0046	33	c.20 others(44): Show c.2086_*2087insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	TBX1	ENSG00000184058.16	transcript	ENST00000649276.2	protein_coding		1620		chr22	TogoVar
TBX22_chrX_80009753_80036774	80012157	G G	GAGAAAGA others(26): Show GAGAAAGAAGAGAAAGAGAGAAAGAAAGAAAGAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02155.hp1 NA18971.hp1 NA18986.hp1 others(1): Show HG02155.hp1 NA18971.hp1 NA18986.hp1 NA19005.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0041 a0001c0001t0001g0044 a0001c0001t0001g0202 a0001c0001t0001g0041 a0001c0001t0001g0044 a0001c0001t0001g0202	4	325	0.0123	33	c.-27 others(44): Show c.-2733_-2732insAGAAAGAAGAGAAAGAGAGAAAGAAAGAAAGAA	TBX22	ENSG00000122145.15	transcript	ENST00000373296.8	protein_coding		2595		chrX	TogoVar
TBX2_chr17_61394843_61414466	61402971	A A	AGAGAGAG others(26): Show AGAGAGAGAGAGAGAGAGAGAGAGGGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG02074.hp2 HG02074.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0005 a0001c0003t0005	a0001c0003t0005g0142 a0001c0003t0005g0142	1	438	0.0023	33	c.664 others(46): Show c.664-90_664-89insGAGAGAGAGAGAGAGAGAGAGAGGGAGAGAGA G	TBX2	ENSG00000121068.14	transcript	ENST00000240328.4	protein_coding	2/6			chr17	TogoVar
TBX5_chr12_114348911_114411144	114370317	A A	AAAAGAAA others(26): Show AAAAGAAAACAAAGAAAAGAAAAGAAAAGAAAAG	intron_variant intron_variant	MODIFIER	NA20129.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0018 a0001c0001t0018	a0001c0001t0018g0034 a0001c0001t0018g0034	1	390	0.0026	33	c.756 others(50): Show c.756-3927_756-3926insCTTTTCTTTTCTTTTCTTTTCTTTGTTT TCTTT	TBX5	ENSG00000089225.20	transcript	ENST00000405440.7	protein_coding	7/8			chr12	TogoVar
TC2N_chr14_91774746_91872536	91854420	G G	GGAGGGGG others(26): Show GGAGGGGGAGGGGAAGGAGGAGGAGGAGATAGGA	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01891.hp2 HG02559.hp2 others(4): Show HG01109.hp1 HG01891.hp2 HG02559.hp2 HG02622.hp2 HG02809.hp1 HG03130.hp2 HG03195.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0026 a0001c0001t0009 a0001c0001t0026	a0001c0001t0009g0153 a0001c0001t0009g0154 a0001c0001t0009g0155 others(4): Show a0001c0001t0009g0153 a0001c0001t0009g0154 a0001c0001t0009g0155 a0001c0001t0009g0156 a0001c0001t0009g0157 a0001c0001t0009g0160 a0001c0001t0026g0158	7	344	0.0204	33	c.-57 others(52): Show c.-57+12809_-57+12841dupTCCTATCTCCTCCTCCTCCTTCCCCT CCCCCTC	TC2N	ENSG00000165929.13	transcript	ENST00000435962.7	protein_coding	1/11			chr14	TogoVar
TCERG1L_chr10_131087391_131316721	131309834	C C	CAAAAAAA others(26): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA18979.hp1 NA18979.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0189 a0001c0001t0011g0189	1	324	0.0031	33	c.343 others(48): Show c.343-536_343-535insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT TTT	TCERG1L	ENSG00000176769.9	transcript	ENST00000368642.4	protein_coding	1/11			chr10	TogoVar
TCF12_chr15_56913644_57294853	56984014	A A	AAAAAAAA others(26): Show AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG01167.hp2 HG01169.hp1 others(2): Show HG00140.hp2 HG01167.hp2 HG01169.hp1 HG02145.hp2 HG02280.hp1	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0001 a0001c0005t0001 a0001c0001t0001 a0001c0005t0001	a0001c0001t0001g0042 a0001c0001t0001g0227 a0001c0005t0001g0087 others(2): Show a0001c0001t0001g0042 a0001c0001t0001g0227 a0001c0005t0001g0087 a0001c0005t0001g0088 a0001c0005t0001g0324	5	330	0.0152	33	c.148 others(52): Show c.148+62918_148+62919insAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAGAA	TCF12	ENSG00000140262.18	transcript	ENST00000333725.10	protein_coding	3/20		INFO_REALIGN_3_PRIME	chr15	TogoVar
TCF12_chr15_56913644_57294853	57264195	C C	CTTTTTTT others(26): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02818.hp1 HG02818.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0061 a0001c0001t0001g0061	1	330	0.0030	33	c.174 others(50): Show c.1745+944_1745+945insTTTTTTTTTTTTTTTTTTTTTTTTTTTT TTTTT	TCF12	ENSG00000140262.18	transcript	ENST00000333725.10	protein_coding	18/20		INFO_REALIGN_3_PRIME	chr15	TogoVar
TCF12_chr15_56913644_57294853	57275327	G G	GGGGGGGG others(26): Show GGGGGGGGGGGGGTGTGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG02559.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0328 a0001c0001t0011g0328	1	330	0.0030	33	c.197 others(52): Show c.1978+2066_1978+2067insGGGGGGGGGGGTGTGTGTGTGTGTGT GTGTGTG	TCF12	ENSG00000140262.18	transcript	ENST00000333725.10	protein_coding	19/20		INFO_REALIGN_3_PRIME	chr15	TogoVar
TCF20_chr22_42155013_42275653	42242202	C C	CAAAAAAA others(26): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG01243.hp2	a0001 a0001	a0001c0010 a0001c0010	a0001c0010t0006 a0001c0010t0006	a0001c0010t0006g0008 a0001c0010t0006g0008	1	355	0.0028	33	c.-36 others(52): Show c.-36-26862_-36-26861insTTTTTTTTTTTTTTTTTTTTTTTTTT TTTTTTT	TCF20	ENSG00000100207.21	transcript	ENST00000677622.1	protein_coding	1/5			chr22	TogoVar
TCF20_chr22_42155013_42275653	42242227	A A	AAAAAAAA others(26): Show AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAT	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG01515.hp2 NA20752.hp2 HG00140.hp2 HG01515.hp2 NA20752.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0025 a0002c0003t0001g0031 a0002c0003t0001g0032 a0002c0003t0001g0025 a0002c0003t0001g0031 a0002c0003t0001g0032	3	355	0.0085	33	c.-36 others(52): Show c.-36-26887_-36-26886insATTTTTTTTTTTTTTTTTTTTTTTTT TTTTTTT	TCF20	ENSG00000100207.21	transcript	ENST00000677622.1	protein_coding	1/5			chr22	TogoVar
TCF20_chr22_42155013_42275653	42243292	C C	CAAAAAAA others(26): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02647.hp1 HG06807.hp1 HG02647.hp1 HG06807.hp1	a0002 a0002	a0002c0007 a0002c0007	a0002c0007t0001 a0002c0007t0001	a0002c0007t0001g0078 a0002c0007t0001g0086 a0002c0007t0001g0078 a0002c0007t0001g0086	2	355	0.0056	33	c.-37 others(52): Show c.-37+27046_-37+27047insTTTTTTTTTTTTTTTTTTTTTTTTTT TTTTTTT	TCF20	ENSG00000100207.21	transcript	ENST00000677622.1	protein_coding	1/5			chr22	TogoVar
TCF25_chr16_89868592_89916379	89869045	A A	ACATATAT others(26): Show ACATATATATATATATATATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00609.hp1 HG00621.hp2 HG02080.hp2 HG00609.hp1 HG00621.hp2 HG02080.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0035 a0001c0002t0001g0044 a0001c0002t0001g0050 a0001c0002t0001g0035 a0001c0002t0001g0044 a0001c0002t0001g0050	3	300	0.0100	33	c.-46 others(44): Show c.-4623_-4622insCATATATATATATATATATATATATATATATAT	TCF25	ENSG00000141002.20	transcript	ENST00000263346.13	protein_coding		4546		chr16	TogoVar
TCF25_chr16_89868592_89916379	89869053	A A	AAAAAAAA others(26): Show AAAAAAAAAAAAAAATATATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA20300.hp1 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0243 a0001c0001t0001g0243	1	300	0.0033	33	c.-46 others(44): Show c.-4615_-4614insAAAAAAAAAAAAAATATATATATATATATATAT	TCF25	ENSG00000141002.20	transcript	ENST00000263346.13	protein_coding		4538		chr16	TogoVar
TCF25_chr16_89868592_89916379	89869053	A A	AAAAAAAA others(26): Show AAAAAAAAAAAAATATATATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01261.hp2 HG02683.hp2 HG01261.hp2 HG02683.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0210 a0001c0001t0001g0254 a0001c0001t0001g0210 a0001c0001t0001g0254	2	300	0.0067	33	c.-46 others(44): Show c.-4615_-4614insAAAAAAAAAAAATATATATATATATATATATAT	TCF25	ENSG00000141002.20	transcript	ENST00000263346.13	protein_coding		4538		chr16	TogoVar
TCF25_chr16_89868592_89916379	89869053	A A	AAAAAAAA others(26): Show AAAAAAAAATATATATATATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02015.hp1 NA18940.hp1 HG02015.hp1 NA18940.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0004c0012 a0001c0001 a0004c0012	a0001c0001t0001 a0004c0012t0001 a0001c0001t0001 a0004c0012t0001	a0001c0001t0001g0241 a0004c0012t0001g0257 a0001c0001t0001g0241 a0004c0012t0001g0257	2	300	0.0067	33	c.-46 others(44): Show c.-4615_-4614insAAAAAAAATATATATATATATATATATATATAT	TCF25	ENSG00000141002.20	transcript	ENST00000263346.13	protein_coding		4538		chr16	TogoVar
TCF25_chr16_89868592_89916379	89869053	A A	AAAAAAAT others(26): Show AAAAAAATATATATATATATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19063.hp2 NA19063.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0222 a0001c0001t0001g0222	1	300	0.0033	33	c.-46 others(44): Show c.-4615_-4614insAAAAAATATATATATATATATATATATATATAT	TCF25	ENSG00000141002.20	transcript	ENST00000263346.13	protein_coding		4538		chr16	TogoVar
TCF25_chr16_89868592_89916379	89869053	A A	AAAAATAT others(26): Show AAAAATATATATATATATATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01169.hp2 HG03831.hp2 HG01169.hp2 HG03831.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0208 a0001c0001t0001g0265 a0001c0001t0001g0208 a0001c0001t0001g0265	2	300	0.0067	33	c.-46 others(44): Show c.-4615_-4614insAAAATATATATATATATATATATATATATATAT	TCF25	ENSG00000141002.20	transcript	ENST00000263346.13	protein_coding		4538		chr16	TogoVar
TCF3_chr19_1604292_1657615	1627753	A A	AAAGGGGA others(26): Show AAAGGGGACAGCAGAGCTCACGGGGTGAGGTGGG	intron_variant intron_variant	MODIFIER	HG01261.hp1 HG01261.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0021 a0001c0004t0021	a0001c0004t0021g0334 a0001c0004t0021g0334	1	352	0.0028	33	c.299 others(48): Show c.299-360_299-328dupCCCACCTCACCCCGTGAGCTCTGCTGTCCC CTT	TCF3	ENSG00000071564.19	transcript	ENST00000262965.12	protein_coding	5/18			chr19	TogoVar
TCF3_chr19_1604292_1657615	1627818	C C	CGGGAAGG others(26): Show CGGGAAGGGGACAGCAGAACTCACGGGGTGAGGT	intron_variant intron_variant	MODIFIER	HG02083.hp1 HG02083.hp1	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0007 a0002c0001t0007	a0002c0001t0007g0062 a0002c0001t0007g0062	1	352	0.0028	33	c.299 others(48): Show c.299-393_299-392insACCTCACCCCGTGAGTTCTGCTGTCCCCTT CCC	TCF3	ENSG00000071564.19	transcript	ENST00000262965.12	protein_coding	5/18			chr19	TogoVar
TCF3_chr19_1604292_1657615	1627843	G G	GGGGATGA others(26): Show GGGGATGAGGCGGGAAGGGGACAGCAGAGCTCAC	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG01106.hp1 HG01123.hp2 others(5): Show HG00735.hp2 HG01106.hp1 HG01123.hp2 HG01255.hp2 HG02148.hp1 HG03139.hp1 HG03516.hp1 NA19056.hp2	a0001 a0002 a0001 a0002	a0001c0004 a0002c0001 a0001c0004 a0002c0001	a0001c0004t0003 a0001c0004t0011 a0001c0004t0021 others(1): Show a0001c0004t0003 a0001c0004t0011 a0001c0004t0021 a0002c0001t0007	a0001c0004t0003g0044 a0001c0004t0003g0105 a0001c0004t0003g0106 others(5): Show a0001c0004t0003g0044 a0001c0004t0003g0105 a0001c0004t0003g0106 a0001c0004t0003g0109 a0001c0004t0003g0279 a0001c0004t0011g0145 a0001c0004t0021g0321 a0002c0001t0007g0054	8	352	0.0227	33	c.299 others(48): Show c.299-418_299-417insGTGAGCTCTGCTGTCCCCTTCCCGCCTCAT CCC	TCF3	ENSG00000071564.19	transcript	ENST00000262965.12	protein_coding	5/18			chr19	TogoVar
TCF3_chr19_1604292_1657615	1627853	C C	CGGGAAGG others(26): Show CGGGAAGGGGACAGCAGAACTCACGGGGTGAGGT	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG01069.hp2 NA18612.hp1 others(1): Show HG00738.hp1 HG01069.hp2 NA18612.hp1 NA18998.hp2	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0014 a0002c0001t0029 a0002c0001t0053 others(1): Show a0002c0001t0014 a0002c0001t0029 a0002c0001t0053 a0002c0001t0057	a0002c0001t0014g0073 a0002c0001t0029g0159 a0002c0001t0053g0057 others(1): Show a0002c0001t0014g0073 a0002c0001t0029g0159 a0002c0001t0053g0057 a0002c0001t0057g0158	4	352	0.0114	33	c.299 others(48): Show c.299-428_299-427insACCTCACCCCGTGAGTTCTGCTGTCCCCTT CCC	TCF3	ENSG00000071564.19	transcript	ENST00000262965.12	protein_coding	5/18			chr19	TogoVar
TCF3_chr19_1604292_1657615	1627853	C C	CGGGAAGG others(26): Show CGGGAAGGGGACAGCAGAGCTCACGGGGTGAGGT	intron_variant intron_variant	MODIFIER	NA18962.hp2 NA18962.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0009 a0001c0005t0009	a0001c0005t0009g0016 a0001c0005t0009g0016	1	352	0.0028	33	c.299 others(48): Show c.299-428_299-427insACCTCACCCCGTGAGCTCTGCTGTCCCCTT CCC	TCF3	ENSG00000071564.19	transcript	ENST00000262965.12	protein_coding	5/18			chr19	TogoVar
TCF3_chr19_1604292_1657615	1627878	G G	GGGGATGA others(26): Show GGGGATGAGGCGGGAAGGGGACAGCAGAACTCAC	intron_variant intron_variant	MODIFIER	HG00544.hp2 HG00621.hp2 HG02071.hp1 others(16): Show HG00544.hp2 HG00621.hp2 HG02071.hp1 HG02293.hp2 NA18747.hp2 NA18944.hp2 NA18947.hp2 NA18948.hp1 NA18955.hp1 NA18955.hp2 NA18963.hp1 NA18964.hp1 NA18970.hp1 NA18989.hp2 NA19010.hp2 NA19063.hp2 NA19064.hp2 NA19070.hp2 NA19085.hp1	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0014 a0016 a0020	a0001c0007 a0001c0025 a0002c0001 others(4): Show a0001c0007 a0001c0025 a0002c0001 a0003c0006 a0014c0020 a0016c0027 a0020c0034	a0001c0007t0002 a0001c0025t0010 a0002c0001t0001 others(13): Show a0001c0007t0002 a0001c0025t0010 a0002c0001t0001 a0002c0001t0006 a0002c0001t0019 a0002c0001t0022 a0003c0006t0001 a0003c0006t0002 a0003c0006t0010 a0003c0006t0012 a0003c0006t0017 a0003c0006t0031 a0003c0006t0033 a0014c0020t0034 a0016c0027t0004 a0020c0034t0010	a0001c0007t0002g0127 a0001c0025t0010g0266 a0002c0001t0001g0122 others(16): Show a0001c0007t0002g0127 a0001c0025t0010g0266 a0002c0001t0001g0122 a0002c0001t0006g0055 a0002c0001t0006g0089 a0002c0001t0019g0056 a0002c0001t0022g0310 a0003c0006t0001g0119 a0003c0006t0002g0120 a0003c0006t0002g0147 a0003c0006t0010g0141 a0003c0006t0012g0329 a0003c0006t0017g0294 a0003c0006t0017g0297 a0003c0006t0031g0129 a0003c0006t0033g0315 a0014c0020t0034g0316 a0016c0027t0004g0020 a0020c0034t0010g0146	19	352	0.0540	33	c.299 others(48): Show c.299-453_299-452insGTGAGTTCTGCTGTCCCCTTCCCGCCTCAT CCC	TCF3	ENSG00000071564.19	transcript	ENST00000262965.12	protein_coding	5/18			chr19	TogoVar
TCF3_chr19_1604292_1657615	1627878	G G	GGGGATGA others(26): Show GGGGATGAGGCGGGAAGGGGACAGCAGAGCTCAC	intron_variant intron_variant	MODIFIER	HG02723.hp1 HG03516.hp2 HG02723.hp1 HG03516.hp2	a0001 a0003 a0001 a0003	a0001c0002 a0003c0006 a0001c0002 a0003c0006	a0001c0002t0002 a0003c0006t0067 a0001c0002t0002 a0003c0006t0067	a0001c0002t0002g0191 a0003c0006t0067g0130 a0001c0002t0002g0191 a0003c0006t0067g0130	2	352	0.0057	33	c.299 others(48): Show c.299-453_299-452insGTGAGCTCTGCTGTCCCCTTCCCGCCTCAT CCC	TCF3	ENSG00000071564.19	transcript	ENST00000262965.12	protein_coding	5/18			chr19	TogoVar
TCF3_chr19_1604292_1657615	1627878	G G	GGGGGTGA others(26): Show GGGGGTGAGGCGGGAAGGGGACAGCAGAGCTCAC	intron_variant intron_variant	MODIFIER	NA21309.hp1 NA21309.hp1	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0030 a0001c0005t0030	a0001c0005t0030g0192 a0001c0005t0030g0192	1	352	0.0028	33	c.299 others(48): Show c.299-485_299-453dupGTGAGCTCTGCTGTCCCCTTCCCGCCTCAC CCC	TCF3	ENSG00000071564.19	transcript	ENST00000262965.12	protein_coding	5/18			chr19	TogoVar
TCF3_chr19_1604292_1657615	1627923	C C	CGGGAAGG others(26): Show CGGGAAGGGGACAGCAGAACTCACGGGGTGAGGT	intron_variant intron_variant	MODIFIER	NA18963.hp2 NA18963.hp2	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0006 a0002c0001t0006	a0002c0001t0006g0075 a0002c0001t0006g0075	1	352	0.0028	33	c.299 others(48): Show c.299-498_299-497insACCTCACCCCGTGAGTTCTGCTGTCCCCTT CCC	TCF3	ENSG00000071564.19	transcript	ENST00000262965.12	protein_coding	5/18			chr19	TogoVar
TCF3_chr19_1604292_1657615	1627988	A A	AGGTGGGA others(26): Show AGGTGGGAAGGGGACAGCAGAGCTCACGGGGTGG	intron_variant intron_variant	MODIFIER	HG02970.hp2 HG02970.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0076 a0001c0003t0076	a0001c0003t0076g0045 a0001c0003t0076g0045	1	352	0.0028	33	c.299 others(48): Show c.299-563_299-562insCCACCCCGTGAGCTCTGCTGTCCCCTTCCC ACC	TCF3	ENSG00000071564.19	transcript	ENST00000262965.12	protein_coding	5/18			chr19	TogoVar
TCF3_chr19_1604292_1657615	1627991	C C	CGGGAAGG others(26): Show CGGGAAGGGGACAGCAGAGCTCACGGGGTGAGGT	intron_variant intron_variant	MODIFIER	HG01358.hp2 HG01358.hp2	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0015 a0002c0001t0015	a0002c0001t0015g0080 a0002c0001t0015g0080	1	352	0.0028	33	c.299 others(48): Show c.299-566_299-565insACCTCACCCCGTGAGCTCTGCTGTCCCCTT CCC	TCF3	ENSG00000071564.19	transcript	ENST00000262965.12	protein_coding	5/18			chr19	TogoVar
TCF3_chr19_1604292_1657615	1628016	G G	GGGGATGA others(26): Show GGGGATGAGGCGGGAAGGGGACAGCAGAGCTCAC	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG01175.hp2 HG02055.hp1 others(3): Show HG00323.hp2 HG01175.hp2 HG02055.hp1 NA18966.hp2 NA18977.hp2 NA19068.hp2	a0001 a0001	a0001c0003 a0001c0004 a0001c0007 a0001c0003 a0001c0004 a0001c0007	a0001c0003t0001 a0001c0003t0005 a0001c0004t0003 others(2): Show a0001c0003t0001 a0001c0003t0005 a0001c0004t0003 a0001c0007t0002 a0001c0007t0012	a0001c0003t0001g0234 a0001c0003t0005g0338 a0001c0003t0005g0340 others(3): Show a0001c0003t0001g0234 a0001c0003t0005g0338 a0001c0003t0005g0340 a0001c0004t0003g0286 a0001c0007t0002g0278 a0001c0007t0012g0335	6	352	0.0171	33	c.299 others(48): Show c.299-591_299-590insGTGAGCTCTGCTGTCCCCTTCCCGCCTCAT CCC	TCF3	ENSG00000071564.19	transcript	ENST00000262965.12	protein_coding	5/18			chr19	TogoVar
TCF3_chr19_1604292_1657615	1628016	G G	GGGGGTGA others(26): Show GGGGGTGAGGCGGGAAAGGGACAGCAGAACTCAC	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00323.hp1	a0003 a0003	a0003c0008 a0003c0008	a0003c0008t0068 a0003c0008t0068	a0003c0008t0068g0268 a0003c0008t0068g0268	1	352	0.0028	33	c.299 others(48): Show c.299-591_299-590insGTGAGTTCTGCTGTCCCTTTCCCGCCTCAC CCC	TCF3	ENSG00000071564.19	transcript	ENST00000262965.12	protein_coding	5/18			chr19	TogoVar
TCF3_chr19_1604292_1657615	1628016	G G	GGGGGTGA others(26): Show GGGGGTGAGGCGGGAAGGGGACAGCAGAACTCAC	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG01243.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0003 a0001c0004t0003	a0001c0004t0003g0220 a0001c0004t0003g0220	1	352	0.0028	33	c.299 others(48): Show c.299-591_299-590insGTGAGTTCTGCTGTCCCCTTCCCGCCTCAC CCC	TCF3	ENSG00000071564.19	transcript	ENST00000262965.12	protein_coding	5/18			chr19	TogoVar
TCF3_chr19_1604292_1657615	1628016	G G	GGGGGTGA others(26): Show GGGGGTGAGGCGGGAAGGGGACAGCAGAACTCAT	intron_variant intron_variant	MODIFIER	HG00408.hp2 HG00408.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0102 a0001c0004t0102	a0001c0004t0102g0344 a0001c0004t0102g0344	1	352	0.0028	33	c.299 others(48): Show c.299-591_299-590insATGAGTTCTGCTGTCCCCTTCCCGCCTCAC CCC	TCF3	ENSG00000071564.19	transcript	ENST00000262965.12	protein_coding	5/18			chr19	TogoVar
TCF3_chr19_1604292_1657615	1628051	G G	GGGGATGA others(26): Show GGGGATGAGGCGGGAAGGGGACAGCAGAACTCAC	intron_variant intron_variant	MODIFIER	NA19085.hp1 NA19085.hp1	a0003 a0003	a0003c0006 a0003c0006	a0003c0006t0002 a0003c0006t0002	a0003c0006t0002g0147 a0003c0006t0002g0147	1	352	0.0028	33	c.299 others(48): Show c.299-626_299-625insGTGAGTTCTGCTGTCCCCTTCCCGCCTCAT CCC	TCF3	ENSG00000071564.19	transcript	ENST00000262965.12	protein_coding	5/18			chr19	TogoVar
TCF3_chr19_1604292_1657615	1628051	G G	GGGGGTGA others(26): Show GGGGGTGAGGCGGGAAGGGGACAGCAGAACTCAC	intron_variant intron_variant	MODIFIER	NA19005.hp2 NA19005.hp2	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0012 a0001c0007t0012	a0001c0007t0012g0323 a0001c0007t0012g0323	1	352	0.0028	33	c.299 others(48): Show c.299-626_299-625insGTGAGTTCTGCTGTCCCCTTCCCGCCTCAC CCC	TCF3	ENSG00000071564.19	transcript	ENST00000262965.12	protein_coding	5/18			chr19	TogoVar
TCF3_chr19_1604292_1657615	1628085	G G	GGGGGTGA others(26): Show GGGGGTGAGGCGGGAAGGGGACAGCAGAGCTCAC	intron_variant intron_variant	MODIFIER	HG01256.hp1 HG01433.hp2 HG01256.hp1 HG01433.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0209 a0001c0002t0001g0216 a0001c0002t0001g0209 a0001c0002t0001g0216	2	352	0.0057	33	c.299 others(48): Show c.299-692_299-660dupGTGAGCTCTGCTGTCCCCTTCCCGCCTCAC CCC	TCF3	ENSG00000071564.19	transcript	ENST00000262965.12	protein_coding	5/18			chr19	TogoVar
TCF3_chr19_1604292_1657615	1628124	A A	ATGAGGCG others(26): Show ATGAGGCGGGAAGGGGACAGCAGAACTCACGGGG	intron_variant intron_variant	MODIFIER	HG01993.hp1 HG01993.hp1	a0007 a0007	a0007c0016 a0007c0016	a0007c0016t0002 a0007c0016t0002	a0007c0016t0002g0260 a0007c0016t0002g0260	1	352	0.0028	33	c.299 others(48): Show c.299-731_299-699dupCCCCGTGAGTTCTGCTGTCCCCTTCCCGCC TCA	TCF3	ENSG00000071564.19	transcript	ENST00000262965.12	protein_coding	5/18			chr19	TogoVar
TCF3_chr19_1604292_1657615	1628221	G G	GGGGATGA others(26): Show GGGGATGAGGCGGGAAGGGGACAGCAGAGCTCAC	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG02273.hp2 NA19070.hp1 HG00099.hp1 HG02273.hp2 NA19070.hp1	a0001 a0001	a0001c0002 a0001c0003 a0001c0002 a0001c0003	a0001c0002t0001 a0001c0003t0001 a0001c0002t0001 a0001c0003t0001	a0001c0002t0001g0213 a0001c0002t0001g0215 a0001c0003t0001g0165 a0001c0002t0001g0213 a0001c0002t0001g0215 a0001c0003t0001g0165	3	352	0.0085	33	c.299 others(48): Show c.299-796_299-795insGTGAGCTCTGCTGTCCCCTTCCCGCCTCAT CCC	TCF3	ENSG00000071564.19	transcript	ENST00000262965.12	protein_coding	5/18			chr19	TogoVar
TCF3_chr19_1604292_1657615	1628221	G G	GGGGGTGA others(26): Show GGGGGTGAGGCGGGAAAGGGACAGCAGAACTCAC	intron_variant intron_variant	MODIFIER	NA18971.hp1 NA18971.hp1	a0003 a0003	a0003c0006 a0003c0006	a0003c0006t0001 a0003c0006t0001	a0003c0006t0001g0160 a0003c0006t0001g0160	1	352	0.0028	33	c.299 others(48): Show c.299-796_299-795insGTGAGTTCTGCTGTCCCTTTCCCGCCTCAC CCC	TCF3	ENSG00000071564.19	transcript	ENST00000262965.12	protein_coding	5/18			chr19	TogoVar
TCF3_chr19_1604292_1657615	1628221	G G	GGGGGTGA others(26): Show GGGGGTGAGGCGGGAAGGGGACAGCAGAACTCAT	intron_variant intron_variant	MODIFIER	NA18969.hp2 NA18969.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0008 a0001c0004t0008	a0001c0004t0008g0151 a0001c0004t0008g0151	1	352	0.0028	33	c.299 others(48): Show c.299-796_299-795insATGAGTTCTGCTGTCCCCTTCCCGCCTCAC CCC	TCF3	ENSG00000071564.19	transcript	ENST00000262965.12	protein_coding	5/18			chr19	TogoVar
TCF3_chr19_1604292_1657615	1628221	G G	GGGGGTGA others(26): Show GGGGGTGAGGCGGGAAGGGGACAGCAGAGCTCAC	intron_variant intron_variant	MODIFIER	HG02698.hp2 HG02698.hp2	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0001 a0001c0007t0001	a0001c0007t0001g0232 a0001c0007t0001g0232	1	352	0.0028	33	c.299 others(48): Show c.299-828_299-796dupGTGAGCTCTGCTGTCCCCTTCCCGCCTCAC CCC	TCF3	ENSG00000071564.19	transcript	ENST00000262965.12	protein_coding	5/18			chr19	TogoVar

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Search Results (Total: 4928 hits)