Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
THEM4_chr1_151865866_151914511	151867582	C C	CTCTTCTT others(26): Show CTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03471.hp1 HG03471.hp1	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0028 a0003c0004t0028	a0003c0004t0028g0041 a0003c0004t0028g0041	1	374	0.0027	33	c.73 others(44): Show c.7305_*7306insAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA	THEM4	ENSG00000159445.13	transcript	ENST00000368814.8	protein_coding		3283		chr1	TogoVar
THEM4_chr1_151865866_151914511	151867588	C C	CTCCTCTT others(26): Show CTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01261.hp1 HG01516.hp1 HG01884.hp1 others(4): Show HG01261.hp1 HG01516.hp1 HG01884.hp1 NA18950.hp2 NA18978.hp2 NA20129.hp2 NA20805.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0012 a0001c0001t0001g0018 others(3): Show a0001c0001t0001g0001 a0001c0001t0001g0012 a0001c0001t0001g0018 a0001c0001t0001g0020 a0001c0001t0001g0053 a0001c0001t0001g0056	7	374	0.0187	33	c.72 others(44): Show c.7299_*7300insAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGA	THEM4	ENSG00000159445.13	transcript	ENST00000368814.8	protein_coding		3277		chr1	TogoVar
THEMIS_chr6_127703200_127906058	127731864	A A	ATTTTTTT others(26): Show ATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00558.hp2 HG02976.hp1 HG03209.hp2 HG00558.hp2 HG02976.hp1 HG03209.hp2	a0001 a0002 a0001 a0002	a0001c0002 a0002c0001 a0001c0002 a0002c0001	a0001c0002t0001 a0002c0001t0001 a0001c0002t0001 a0002c0001t0001	a0001c0002t0001g0067 a0002c0001t0001g0038 a0002c0001t0001g0182 a0001c0002t0001g0067 a0002c0001t0001g0038 a0002c0001t0001g0182	3	223	0.0135	33	c.175 others(54): Show c.1759-12042_1759-12041insAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAA	THEMIS	ENSG00000172673.12	transcript	ENST00000368248.5	protein_coding	4/5			chr6	TogoVar
THEMIS_chr6_127703200_127906058	127746711	C C	CTATAATT others(26): Show CTATAATTATATATTATTATATAATTATATTATA	intron_variant intron_variant	MODIFIER	HG03098.hp1 HG03540.hp1 NA19043.hp1 others(1): Show HG03098.hp1 HG03540.hp1 NA19043.hp1 NA19090.hp2	a0001 a0001	a0001c0003 a0001c0010 a0001c0003 a0001c0010	a0001c0003t0001 a0001c0010t0001 a0001c0003t0001 a0001c0010t0001	a0001c0003t0001g0066 a0001c0003t0001g0135 a0001c0003t0001g0141 others(1): Show a0001c0003t0001g0066 a0001c0003t0001g0135 a0001c0003t0001g0141 a0001c0010t0001g0085	4	223	0.0179	33	c.175 others(54): Show c.1759-26921_1759-26889dupTATAATATAATTATATAATAATAT ATAATTATA	THEMIS	ENSG00000172673.12	transcript	ENST00000368248.5	protein_coding	4/5			chr6	TogoVar
THEMIS_chr6_127703200_127906058	127746912	T T	TAATTATA others(26): Show TAATTATATATTATTATATAATTATATTATATAA	intron_variant intron_variant	MODIFIER	HG01981.hp1 HG01981.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0144 a0001c0002t0002g0144	1	223	0.0045	33	c.175 others(54): Show c.1759-27090_1759-27089insTTATATAATATAATTATATAATAA TATATAATT	THEMIS	ENSG00000172673.12	transcript	ENST00000368248.5	protein_coding	4/5			chr6	TogoVar
THEMIS_chr6_127703200_127906058	127787838	G G	GATAGATA others(26): Show GATAGATAGAGATAGACAGATATAGATAGATGAT	intron_variant intron_variant	MODIFIER	HG02970.hp1 HG02970.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0009 a0001c0002t0003g0009	1	223	0.0045	33	c.175 others(54): Show c.1758+25044_1758+25045insATCATCTATCTATATCTGTCTATC TCTATCTAT	THEMIS	ENSG00000172673.12	transcript	ENST00000368248.5	protein_coding	4/5			chr6	TogoVar
THEMIS_chr6_127703200_127906058	127862428	A A	ATTTTTTT others(26): Show ATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01358.hp1 HG01358.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0048 a0001c0002t0001g0048	1	223	0.0045	33	c.92- others(48): Show c.92-7241_92-7240insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAA	THEMIS	ENSG00000172673.12	transcript	ENST00000368248.5	protein_coding	1/5			chr6	TogoVar
THNSL2_chr2_88165346_88191627	88181228	C C	CTCTCCTC others(26): Show CTCTCCTCTCTCCTCTCTCTCTCCTCTCTCCTCT	intron_variant intron_variant	MODIFIER	HG01934.hp1 HG01934.hp1	a0005 a0005	a0005c0008 a0005c0008	a0005c0008t0006 a0005c0008t0006	a0005c0008t0006g0016 a0005c0008t0006g0016	1	54	0.0185	33	c.803 others(50): Show c.803-1471_803-1470insTCTCCTCTCTCCTCTCTCTCTCCTCTCT CCTCT	THNSL2	ENSG00000144115.18	transcript	ENST00000674334.2	protein_coding	5/8			chr2	TogoVar
THSD4_chr15_71110471_71788383	71326700	A A	AAATATAT others(26): Show AAATATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG02572.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0110 a0001c0001t0008g0110	1	116	0.0086	33	c.101 others(54): Show c.1015+69986_1015+69987insATATATATATATATATATATATAT ATATATATA	THSD4	ENSG00000187720.15	transcript	ENST00000261862.8	protein_coding	6/17		INFO_REALIGN_3_PRIME	chr15	TogoVar
THSD4_chr15_71110471_71788383	71326700	A A	ATATATAT others(26): Show ATATATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01346.hp1 HG01346.hp1	a0004 a0004	a0004c0018 a0004c0018	a0004c0018t0006 a0004c0018t0006	a0004c0018t0006g0058 a0004c0018t0006g0058	1	116	0.0086	33	c.101 others(54): Show c.1015+69985_1015+69986insTATATATATATATATATATATATA TATATATAT	THSD4	ENSG00000187720.15	transcript	ENST00000261862.8	protein_coding	6/17			chr15	TogoVar
THSD4_chr15_71110471_71788383	71724287	A A	ATATATAT others(26): Show ATATATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03834.hp1 HG03834.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0039 a0001c0001t0039	a0001c0001t0039g0011 a0001c0001t0039g0011	1	116	0.0086	33	c.135 others(52): Show c.1358-4261_1358-4260insATATATATATATATATATATATATAT ATATATT	THSD4	ENSG00000187720.15	transcript	ENST00000261862.8	protein_coding	8/17		INFO_REALIGN_3_PRIME	chr15	TogoVar
THSD4_chr15_71110471_71788383	71724287	A A	ATATATAT others(26): Show ATATATATATATATATATATATATATATATTTTT	intron_variant intron_variant	MODIFIER	HG01361.hp1 HG01361.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0075 a0001c0001t0002g0075	1	116	0.0086	33	c.135 others(52): Show c.1358-4261_1358-4260insATATATATATATATATATATATATAT ATTTTTT	THSD4	ENSG00000187720.15	transcript	ENST00000261862.8	protein_coding	8/17		INFO_REALIGN_3_PRIME	chr15	TogoVar
THSD7A_chr7_11365365_11837198	11509821	C C	CAAAAAAA others(26): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00597.hp2 HG00597.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0014 a0001c0001t0005g0014	1	180	0.0056	33	c.182 others(54): Show c.1823-27840_1823-27839insTTTTTTTTTTTTTTTTTTTTTTTT TTTTTTTTT	THSD7A	ENSG00000005108.17	transcript	ENST00000423059.9	protein_coding	6/27			chr7	TogoVar
THSD7A_chr7_11365365_11837198	11769153	A A	ATATATAT others(26): Show ATATATATATATATATATATATTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03041.hp2 HG03041.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0041 a0001c0001t0041	a0001c0001t0041g0138 a0001c0001t0041g0138	1	180	0.0056	33	c.190 others(52): Show c.190+62603_190+62604insAAAAAAAAAAAAATATATATATATAT ATATATA	THSD7A	ENSG00000005108.17	transcript	ENST00000423059.9	protein_coding	1/27			chr7	TogoVar
TIAM2_chr6_154990315_155262723	155028020	T T	TTACATAT others(26): Show TTACATATATACTACATATATGTACTGTGTTACA	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02723.hp1 HG01884.hp2 HG02723.hp1	a0001 a0001	a0001c0002 a0001c0022 a0001c0002 a0001c0022	a0001c0002t0010 a0001c0022t0008 a0001c0002t0010 a0001c0022t0008	a0001c0002t0010g0154 a0001c0022t0008g0155 a0001c0002t0010g0154 a0001c0022t0008g0155	2	230	0.0087	33	c.-20 others(54): Show c.-209+32530_-209+32531insCATATATACTACATATATGTACTG TGTTACATA	TIAM2	ENSG00000146426.19	transcript	ENST00000682666.1	protein_coding	1/26		INFO_REALIGN_3_PRIME	chr6	TogoVar
TIAM2_chr6_154990315_155262723	155187573	C C	CTTTTTTT others(26): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18951.hp2 NA18951.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0172 a0001c0001t0001g0172	1	230	0.0044	33	c.306 others(52): Show c.3064+4096_3064+4097insTTTTTTTTTTTTTTTTTTTTTTTTTT TTTTTTT	TIAM2	ENSG00000146426.19	transcript	ENST00000682666.1	protein_coding	14/26		INFO_REALIGN_3_PRIME	chr6	TogoVar
TIMELESS_chr12_56411363_56454426	56420029	A A	AAAAAAAA others(26): Show AAAAAAAAAAAAATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01255.hp1 HG01928.hp1 HG01255.hp1 HG01928.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0002	a0001c0003t0002g0140 a0001c0003t0002g0180 a0001c0003t0002g0140 a0001c0003t0002g0180	2	402	0.0050	33	c.322 others(50): Show c.3228+539_3228+540insATATATATATATATATATATATTTTTTT TTTTT	TIMELESS	ENSG00000111602.12	transcript	ENST00000553532.6	protein_coding	26/28			chr12	TogoVar
TIMELESS_chr12_56411363_56454426	56420029	A A	AAAAAAAA others(26): Show AAAAAAAAATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18985.hp1 NA18985.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0002	a0001c0003t0002g0195 a0001c0003t0002g0195	1	402	0.0025	33	c.322 others(50): Show c.3228+539_3228+540insATATATATATATATATATATATATATTT TTTTT	TIMELESS	ENSG00000111602.12	transcript	ENST00000553532.6	protein_coding	26/28			chr12	TogoVar
TIMM9_chr14_58403495_58432531	58404119	A A	ATATATAT others(26): Show ATATATATATATATATATATATATATATATTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02040.hp2 HG02683.hp2 NA18995.hp1 others(1): Show HG02040.hp2 HG02683.hp2 NA18995.hp1 NA19056.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0036 a0001c0001t0001g0126 a0001c0001t0001g0203 others(1): Show a0001c0001t0001g0036 a0001c0001t0001g0126 a0001c0001t0001g0203 a0001c0001t0001g0228	4	378	0.0106	33	c.49 others(44): Show c.4914_*4915insAAAAATATATATATATATATATATATATATATA	TIMM9	ENSG00000100575.14	transcript	ENST00000395159.7	protein_coding		4375		chr14	TogoVar
TIMM9_chr14_58403495_58432531	58404119	A A	ATATATAT others(26): Show ATATATATATATATATATATATATATATTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00642.hp1 HG01891.hp1 HG01952.hp1 others(4): Show HG00642.hp1 HG01891.hp1 HG01952.hp1 HG02071.hp2 HG02630.hp1 HG03540.hp2 NA18995.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0037 a0001c0001t0001g0123 a0001c0001t0001g0157 others(4): Show a0001c0001t0001g0037 a0001c0001t0001g0123 a0001c0001t0001g0157 a0001c0001t0001g0163 a0001c0001t0001g0223 a0001c0001t0001g0235 a0001c0001t0002g0058	7	378	0.0185	33	c.49 others(44): Show c.4914_*4915insAAAAAAATATATATATATATATATATATATATA	TIMM9	ENSG00000100575.14	transcript	ENST00000395159.7	protein_coding		4375		chr14	TogoVar
TIMM9_chr14_58403495_58432531	58404119	A A	ATATATAT others(26): Show ATATATATATATATATATATATATATTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01952.hp2 HG02293.hp1 HG02818.hp2 others(1): Show HG01952.hp2 HG02293.hp1 HG02818.hp2 NA19055.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0031 a0001c0001t0001g0121 a0001c0001t0001g0240 others(1): Show a0001c0001t0001g0031 a0001c0001t0001g0121 a0001c0001t0001g0240 a0001c0001t0002g0057	4	378	0.0106	33	c.49 others(44): Show c.4914_*4915insAAAAAAAAATATATATATATATATATATATATA	TIMM9	ENSG00000100575.14	transcript	ENST00000395159.7	protein_coding		4375		chr14	TogoVar
TIMM9_chr14_58403495_58432531	58404119	A A	ATATATAT others(26): Show ATATATATATATATATATATATATTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01070.hp1 NA18999.hp2 HG01070.hp1 NA18999.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0018 a0001c0001t0001g0197 a0001c0001t0001g0018 a0001c0001t0001g0197	2	378	0.0053	33	c.49 others(44): Show c.4914_*4915insAAAAAAAAAAATATATATATATATATATATATA	TIMM9	ENSG00000100575.14	transcript	ENST00000395159.7	protein_coding		4375		chr14	TogoVar
TIMM9_chr14_58403495_58432531	58404119	A A	ATATATAT others(26): Show ATATATATATATATATATATTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18984.hp1 NA18984.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0002	1	378	0.0027	33	c.49 others(44): Show c.4914_*4915insAAAAAAAAAAAAAAATATATATATATATATATA	TIMM9	ENSG00000100575.14	transcript	ENST00000395159.7	protein_coding		4375		chr14	TogoVar
TIMM9_chr14_58403495_58432531	58404119	A A	ATATATAT others(26): Show ATATATATATATATATATTTTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18968.hp2 NA20752.hp2 NA18968.hp2 NA20752.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0017 a0001c0001t0001g0188 a0001c0001t0001g0017 a0001c0001t0001g0188	2	378	0.0053	33	c.49 others(44): Show c.4914_*4915insAAAAAAAAAAAAAAAAATATATATATATATATA	TIMM9	ENSG00000100575.14	transcript	ENST00000395159.7	protein_coding		4375		chr14	TogoVar
TLDC2_chr20_36871138_36899235	36890396	C C	CCCTTTCT others(26): Show CCCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTT	intron_variant intron_variant	MODIFIER	NA18940.hp2 NA18940.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0091 a0001c0001t0001g0091	1	384	0.0026	33	c.17 others(48): Show c.17+993_*17+994insCCTTTCTTTCTTTCTTTCTTTTCTTTCTTT CTT	TLDC2	ENSG00000101342.10	transcript	ENST00000217320.8	protein_coding	6/6			chr20	TogoVar
TLE1_chr9_81578683_81694547	81675698	G G	GTTGTTTT others(26): Show GTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18952.hp1 NA18952.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0219 a0001c0001t0001g0219	1	356	0.0028	33	c.234 others(50): Show c.234+9977_234+9978insAAAAAAAAAAAAAAAAAAAAAAAAAAAA AACAA	TLE1	ENSG00000196781.16	transcript	ENST00000376499.8	protein_coding	4/19			chr9	TogoVar
TLK2_chr17_62473825_62620481	62540400	A A	ATTTTTTT others(26): Show ATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18992.hp2 NA18992.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0052 a0001c0002t0003g0052	1	292	0.0034	33	c.531 others(50): Show c.531+4086_531+4087insTTTTTTTTTTTTTTTTTTTTTTTTTTTT TTTTT	TLK2	ENSG00000146872.19	transcript	ENST00000346027.10	protein_coding	7/21		INFO_REALIGN_3_PRIME	chr17	TogoVar
TLL1_chr4_165868237_166109457	165923421	C C	CTTTTTTT others(26): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18995.hp2 NA18995.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0003 a0001c0003t0003	a0001c0003t0003g0116 a0001c0003t0003g0116	1	250	0.0040	33	c.169 others(52): Show c.169+49373_169+49374insTTTTTTTTTTTTTTTTTTTTTTTTTT TTTTTTT	TLL1	ENSG00000038295.8	transcript	ENST00000061240.7	protein_coding	1/20		INFO_REALIGN_3_PRIME	chr4	TogoVar
TLL2_chr10_96359608_96518926	96476240	A A	ATACATAT others(26): Show ATACATATATATATATATATATTCTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00544.hp2 HG02165.hp2 NA18612.hp2 others(5): Show HG00544.hp2 HG02165.hp2 NA18612.hp2 NA18747.hp1 NA18943.hp1 NA18960.hp1 NA18988.hp1 NA19009.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0041 a0001c0001t0001g0058 a0001c0001t0001g0131 others(5): Show a0001c0001t0001g0041 a0001c0001t0001g0058 a0001c0001t0001g0131 a0001c0001t0002g0032 a0001c0001t0002g0175 a0001c0001t0002g0176 a0001c0001t0002g0177 a0001c0001t0002g0178	8	256	0.0313	33	c.286 others(50): Show c.286+4108_286+4109insAAAAAAAAAAGAATATATATATATATAT ATGTA	TLL2	ENSG00000095587.9	transcript	ENST00000357947.4	protein_coding	2/20			chr10	TogoVar
TLL2_chr10_96359608_96518926	96476240	A A	ATATATAT others(26): Show ATATATATATATATATATATATATATATTTTTTT	intron_variant intron_variant	MODIFIER	NA18990.hp2 NA18990.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0004 a0001c0002t0004	a0001c0002t0004g0140 a0001c0002t0004g0140	1	256	0.0039	33	c.286 others(50): Show c.286+4108_286+4109insAAAAAAATATATATATATATATATATAT ATATA	TLL2	ENSG00000095587.9	transcript	ENST00000357947.4	protein_coding	2/20			chr10	TogoVar
TLL2_chr10_96359608_96518926	96476240	A A	ATATATAT others(26): Show ATATATATATATATATATATATTCTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00597.hp2 HG01261.hp1 HG02040.hp2 others(4): Show HG00597.hp2 HG01261.hp1 HG02040.hp2 HG02602.hp1 HG02698.hp2 HG03831.hp2 NA18983.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0005 a0001c0001 a0001c0002 a0001c0005	a0001c0001t0001 a0001c0001t0002 a0001c0001t0012 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0012 a0001c0001t0028 a0001c0002t0004 a0001c0005t0002	a0001c0001t0001g0042 a0001c0001t0001g0137 a0001c0001t0002g0135 others(4): Show a0001c0001t0001g0042 a0001c0001t0001g0137 a0001c0001t0002g0135 a0001c0001t0012g0057 a0001c0001t0028g0033 a0001c0002t0004g0156 a0001c0005t0002g0115	7	256	0.0273	33	c.286 others(50): Show c.286+4108_286+4109insAAAAAAAAAAGAATATATATATATATAT ATATA	TLL2	ENSG00000095587.9	transcript	ENST00000357947.4	protein_coding	2/20			chr10	TogoVar
TLL2_chr10_96359608_96518926	96476240	A A	ATATATAT others(26): Show ATATATATATATATATATATTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01358.hp2 HG01358.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0206 a0001c0001t0001g0206	1	256	0.0039	33	c.286 others(50): Show c.286+4108_286+4109insAAAAAAAAAAAAAAATATATATATATAT ATATA	TLL2	ENSG00000095587.9	transcript	ENST00000357947.4	protein_coding	2/20			chr10	TogoVar
TLR1_chr4_38791255_38809791	38792853	T T	TTATATAT others(26): Show TTATATATATATATATATATATATTATATATATA	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18967.hp2 NA18967.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0002 a0001c0001t0002g0002	1	446	0.0022	33	c.36 others(44): Show c.3617_*3618insTATATATATAATATATATATATATATATATATA	TLR1	ENSG00000174125.8	transcript	ENST00000308979.7	protein_coding		3401		chr4	TogoVar
TMED10_chr14_75126469_75181612	75164309	G G	GCACAAAA others(26): Show GCACAAAAAAACAAACAAAAAAATAAACAAACAA	intron_variant intron_variant	MODIFIER	HG03654.hp1 HG03654.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0203 a0001c0001t0001g0203	1	262	0.0038	33	c.225 others(52): Show c.225+12045_225+12046insTTGTTTGTTTATTTTTTTGTTTGTTT TTTTGTG	TMED10	ENSG00000170348.9	transcript	ENST00000303575.9	protein_coding	1/4			chr14	TogoVar
TMEM108_chr3_133033391_133402775	133371613	C C	CAAAAAAA others(26): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG02717.hp2 HG02486.hp2 HG02717.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0093 a0001c0001t0006g0100 a0001c0001t0006g0093 a0001c0001t0006g0100	2	220	0.0091	33	c.41- others(48): Show c.41-8113_41-8112insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAA	TMEM108	ENSG00000144868.14	transcript	ENST00000321871.11	protein_coding	3/5		INFO_REALIGN_3_PRIME	chr3	TogoVar
TMEM117_chr12_43831081_44394758	43969356	T T	TAAAAAAA others(26): Show TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG02622.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0027 a0001c0001t0001g0027	1	110	0.0091	33	c.410 others(52): Show c.410+25031_410+25032insAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAA	TMEM117	ENSG00000139173.10	transcript	ENST00000266534.8	protein_coding	3/7		INFO_REALIGN_3_PRIME	chr12	TogoVar
TMEM130_chr7_98841490_98875014	98842407	A A	ATATATAT others(26): Show ATATATATATATATATATATATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01517.hp1 HG01517.hp2 HG01517.hp1 HG01517.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0277 a0001c0002t0001g0050 a0001c0001t0001g0277 a0001c0002t0001g0050	2	380	0.0053	33	c.56 others(44): Show c.5648_*5649insATATATATATATATATATATATATATATATATA	TMEM130	ENSG00000166448.15	transcript	ENST00000339375.9	protein_coding		4082		chr7	TogoVar
TMEM130_chr7_98841490_98875014	98850273	A A	ATATATAT others(26): Show ATATATATATATATATATTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02148.hp2 NA18944.hp1 NA18962.hp1 others(3): Show HG02148.hp2 NA18944.hp1 NA18962.hp1 NA18977.hp1 NA19055.hp1 NA19055.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0001t0014 a0001c0003t0001 a0001c0001t0001 a0001c0001t0014 a0001c0003t0001	a0001c0001t0001g0334 a0001c0001t0014g0235 a0001c0003t0001g0013 others(2): Show a0001c0001t0001g0334 a0001c0001t0014g0235 a0001c0003t0001g0013 a0001c0003t0001g0104 a0001c0003t0001g0333	6	380	0.0158	33	c.100 others(52): Show c.1006+1147_1006+1148insAAAAAAAAAAAAAAAAATATATATAT ATATATA	TMEM130	ENSG00000166448.15	transcript	ENST00000339375.9	protein_coding	6/7			chr7	TogoVar
TMEM132B_chr12_125181386_125667369	125410432	A A	AGTGGAGG others(26): Show AGTGGAGGAGTGGAGTGGAGTGGAGGAGTGGAAT	intron_variant intron_variant	MODIFIER	HG03579.hp2 HG03579.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0044 a0001c0004t0044	a0001c0004t0044g0023 a0001c0004t0044g0023	1	128	0.0078	33	c.960 others(50): Show c.960-5098_960-5097insTGGAGGAGTGGAGTGGAGTGGAGGAGTG GAATG	TMEM132B	ENSG00000139364.11	transcript	ENST00000682704.1	protein_coding	2/8		INFO_REALIGN_3_PRIME	chr12	TogoVar
TMEM132B_chr12_125181386_125667369	125410895	T T	TGAGTGGA others(26): Show TGAGTGGAGTGGAGTGAGTGGAGTGAGTGGAGTG	intron_variant intron_variant	MODIFIER	HG03195.hp1 HG03195.hp1	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0014 a0002c0001t0014	a0002c0001t0014g0058 a0002c0001t0014g0058	1	128	0.0078	33	c.960 others(50): Show c.960-4631_960-4630insGAGTGGAGTGAGTGGAGTGAGTGGAGTG GAGTG	TMEM132B	ENSG00000139364.11	transcript	ENST00000682704.1	protein_coding	2/8		INFO_REALIGN_3_PRIME	chr12	TogoVar
TMEM132C_chr12_128262170_128712911	128648035	G G	GTGAGTGT others(26): Show GTGAGTGTGTTTACTGGAGTCCATCAGCATTGGA	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG02559.hp1	a0002 a0002	a0002c0038 a0002c0038	a0002c0038t0002 a0002c0038t0002	a0002c0038t0002g0014 a0002c0038t0002g0014	1	170	0.0059	33	c.130 others(54): Show c.1306-21352_1306-21351insGGATGAGTGTGTTTACTGGAGTCC ATCAGCATT	TMEM132C	ENSG00000181234.10	transcript	ENST00000435159.3	protein_coding	4/8		INFO_REALIGN_3_PRIME	chr12	TogoVar
TMEM132C_chr12_128262170_128712911	128709990	C C	CAGCACAC others(26): Show CAGCACACGGTTGCAGGTTCGCAGTGAGAGAGGA	downstream_gene_variant downstream_gene_variant	MODIFIER	NA20905.hp2 NA20905.hp2	a0010 a0010	a0010c0015 a0010c0015	a0010c0015t0001 a0010c0015t0001	a0010c0015t0001g0056 a0010c0015t0001g0056	1	170	0.0059	33	c.36 others(44): Show c.3695_*3696insAGCACACGGTTGCAGGTTCGCAGTGAGAGAGGA	TMEM132C	ENSG00000181234.10	transcript	ENST00000435159.3	protein_coding		2080		chr12	TogoVar
TMEM132D_chr12_129066726_129909025	129828754	G G	GGGAGGAA others(26): Show GGGAGGAAAGGAGGGAGGGAGGGGAGGAAGAAAA	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG00741.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0004 a0001c0002t0004	a0001c0002t0004g0077 a0001c0002t0004g0077	1	94	0.0106	33	c.79+ others(50): Show c.79+74506_79+74507insTTTTCTTCCTCCCCTCCCTCCCTCCTTT CCTCC	TMEM132D	ENSG00000151952.16	transcript	ENST00000422113.7	protein_coding	1/8			chr12	TogoVar
TMEM150C_chr4_82478176_82566988	82562889	C C	CTTTCTTT others(26): Show CTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00639.hp1 HG00639.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0234 a0001c0001t0001g0234	1	256	0.0039	33	c.-99 others(42): Show c.-995_-994insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAA	TMEM150C	ENSG00000249242.8	transcript	ENST00000449862.7	protein_coding		902		chr4	TogoVar
TMEM164_chrX_109998114_110182788	110084380	G G	GTATATAT others(26): Show GTATATATATATAGTATAGTATATATATATAGTA	intron_variant intron_variant	MODIFIER	HG01167.hp1 HG01169.hp2 HG01167.hp1 HG01169.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0103 a0001c0001t0002g0104 a0001c0001t0002g0103 a0001c0001t0002g0104	2	198	0.0101	33	c.440 others(52): Show c.440+17016_440+17017insATATATATATATAGTATAGTATATAT ATATAGT	TMEM164	ENSG00000157600.12	transcript	ENST00000372068.7	protein_coding	3/6		INFO_REALIGN_3_PRIME	chrX	TogoVar
TMEM164_chrX_109998114_110182788	110084413	G G	GTGTATAT others(26): Show GTGTATATATATAGTATAGTATATATATATAGTA	intron_variant intron_variant	MODIFIER	HG03239.hp2 HG03239.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0189 a0001c0001t0001g0189	1	198	0.0051	33	c.440 others(52): Show c.440+17018_440+17019insGTATATATATAGTATAGTATATATAT ATAGTAT	TMEM164	ENSG00000157600.12	transcript	ENST00000372068.7	protein_coding	3/6		INFO_REALIGN_3_PRIME	chrX	TogoVar
TMEM170B_chr6_11532749_11588524	11533146	A A	AGATCTAG others(26): Show AGATCTAGAAATAATAAAATAGATAAAATTAAAT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18965.hp2 NA18965.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0002 a0001c0001t0004g0002	1	352	0.0028	33	c.-51 others(44): Show c.-5132_-5131insGATCTAGAAATAATAAAATAGATAAAATTAAAT	TMEM170B	ENSG00000205269.6	transcript	ENST00000379426.2	protein_coding		4602		chr6	TogoVar
TMEM171_chr5_73115575_73136809	73127382	A A	ATATATAT others(26): Show ATATATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02818.hp2 HG02818.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0233 a0001c0001t0001g0233	1	450	0.0022	33	c.641 others(50): Show c.641-1008_641-1007insTATATATATATATATATATATATATATA TATAT	TMEM171	ENSG00000157111.13	transcript	ENST00000454765.7	protein_coding	2/3			chr5	TogoVar
TMEM171_chr5_73115575_73136809	73127384	A A	AAAAAAAA others(26): Show AAAAAAAAAAAAAAATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA19090.hp2 NA19090.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0094 a0002c0002t0001g0094	1	450	0.0022	33	c.641 others(50): Show c.641-1005_641-1004insAAAAAAAAAAAAATATATATATATATAT ATATA	TMEM171	ENSG00000157111.13	transcript	ENST00000454765.7	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
TMEM171_chr5_73115575_73136809	73127384	A A	AAAAAAAA others(26): Show AAAAAAAAAAATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01934.hp2 HG03831.hp2 HG01934.hp2 HG03831.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0049 a0001c0001t0001g0049	2	450	0.0044	33	c.641 others(50): Show c.641-1005_641-1004insAAAAAAAAATATATATATATATATATAT ATATA	TMEM171	ENSG00000157111.13	transcript	ENST00000454765.7	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr5	TogoVar

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