Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
WIF1_chr12_65045626_65126305	65083829	C C	CTTTTCTT others(26): Show CTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTT	intron_variant intron_variant	MODIFIER	NA21309.hp1 NA21309.hp1	a0004 a0004	a0004c0007 a0004c0007	a0004c0007t0001 a0004c0007t0001	a0004c0007t0001g0256 a0004c0007t0001g0256	1	378	0.0027	33	c.289 others(50): Show c.289-5976_289-5975insAAAGAAAAGAAAAGAAAAGAAAAGAAAA GAAAA	WIF1	ENSG00000156076.10	transcript	ENST00000286574.9	protein_coding	2/9			chr12	TogoVar
WIPI1_chr17_68416281_68462496	68457516	G G	GCCCCGCC others(26): Show GCCCCGCCCCTACCCCGCCCCTACCCCGCCCCTA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02602.hp2 HG03654.hp1 HG04204.hp1 HG02602.hp2 HG03654.hp1 HG04204.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0112 a0001c0001t0002g0130 a0001c0001t0002g0140 a0001c0001t0002g0112 a0001c0001t0002g0130 a0001c0001t0002g0140	3	420	0.0071	33	c.-96 others(40): Show c.-96_-95insTAGGGGCGGGGTAGGGGCGGGGTAGGGGCGGGG	WIPI1	ENSG00000070540.13	transcript	ENST00000262139.10	protein_coding		21		chr17	TogoVar
WNK1_chr12_747579_916452	893823	A A	AAATAATA others(26): Show AAATAATAATAATAATAATAATAATAATAATAAT	intron_variant intron_variant	MODIFIER	HG00673.hp2 HG04184.hp1 NA18946.hp2 HG00673.hp2 HG04184.hp1 NA18946.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0004 a0001c0001t0002 a0001c0001t0004	a0001c0001t0002g0034 a0001c0001t0002g0143 a0001c0001t0004g0131 a0001c0001t0002g0034 a0001c0001t0002g0143 a0001c0001t0004g0131	3	284	0.0106	33	c.551 others(50): Show c.5510-715_5510-714insAATAATAATAATAATAATAATAATAATA ATAAT	WNK1	ENSG00000060237.19	transcript	ENST00000315939.11	protein_coding	22/27		INFO_REALIGN_3_PRIME	chr12	TogoVar
WNK2_chr9_93179139_93325569	93195699	C C	CAAAAAAA others(26): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03486.hp1 NA18984.hp1 HG03486.hp1 NA18984.hp1	a0004 a0004	a0004c0006 a0004c0006	a0004c0006t0001 a0004c0006t0001	a0004c0006t0001g0080 a0004c0006t0001g0085 a0004c0006t0001g0080 a0004c0006t0001g0085	2	316	0.0063	33	c.681 others(52): Show c.681+10114_681+10115insAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAA	WNK2	ENSG00000165238.17	transcript	ENST00000427277.7	protein_coding	2/29		INFO_REALIGN_3_PRIME	chr9	TogoVar
WNT7A_chr3_13811258_13885071	13814737	A A	AGGAAGCC others(26): Show AGGAAGCCTTGGCATTCTTTCAGATTCTCACCTG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02015.hp2 HG02015.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0204 a0001c0002t0204	a0001c0002t0204g0253 a0001c0002t0204g0253	1	354	0.0028	33	c.42 others(44): Show c.4206_*4207insCAGGTGAGAATCTGAAAGAATGCCAAGGCTTCC	WNT7A	ENSG00000154764.6	transcript	ENST00000285018.5	protein_coding		1520		chr3	TogoVar
WNT7A_chr3_13811258_13885071	13818351	C C	CAAAAAAA others(26): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA18980.hp2 NA19057.hp1 NA18980.hp2 NA19057.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0268 a0001c0001t0269 a0001c0001t0268 a0001c0001t0269	a0001c0001t0268g0086 a0001c0001t0269g0246 a0001c0001t0268g0086 a0001c0001t0269g0246	2	354	0.0057	33	c.59 others(42): Show c.592_*593insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	WNT7A	ENSG00000154764.6	transcript	ENST00000285018.5	protein_coding	4/4	592		chr3	TogoVar
WNT7A_chr3_13811258_13885071	13856890	G G	GAAGAAAA others(26): Show GAAGAAAAAGAAGAAGAAGAAGAAGAAGAAGAAA	intron_variant intron_variant	MODIFIER	HG01168.hp1 HG01169.hp1 HG02602.hp1 others(5): Show HG01168.hp1 HG01169.hp1 HG02602.hp1 HG02683.hp1 HG03471.hp1 HG03688.hp1 HG03710.hp2 NA18983.hp2	a0001 a0001	a0001c0001 a0001c0010 a0001c0001 a0001c0010	a0001c0001t0004 a0001c0001t0162 a0001c0001t0167 others(5): Show a0001c0001t0004 a0001c0001t0162 a0001c0001t0167 a0001c0001t0256 a0001c0001t0260 a0001c0001t0270 a0001c0001t0271 a0001c0010t0059	a0001c0001t0004g0188 a0001c0001t0162g0205 a0001c0001t0167g0190 others(5): Show a0001c0001t0004g0188 a0001c0001t0162g0205 a0001c0001t0167g0190 a0001c0001t0256g0219 a0001c0001t0260g0192 a0001c0001t0270g0238 a0001c0001t0271g0239 a0001c0010t0059g0071	8	354	0.0226	33	c.299 others(50): Show c.299-2088_299-2087insTTTCTTCTTCTTCTTCTTCTTCTTCTTT TTCTT	WNT7A	ENSG00000154764.6	transcript	ENST00000285018.5	protein_coding	2/3			chr3	TogoVar
WRN_chr8_31028810_31181138	31179812	T T	TACAAATG others(26): Show TACAAATGTTAATGCATTAGGAGTCGTTTAGTAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02647.hp1 HG02647.hp1	a0006 a0006	a0006c0011 a0006c0011	a0006c0011t0009 a0006c0011t0009	a0006c0011t0009g0120 a0006c0011t0009g0120	1	264	0.0038	33	c.67 others(44): Show c.6710_*6711insACAAATGTTAATGCATTAGGAGTCGTTTAGTAA	WRN	ENSG00000165392.11	transcript	ENST00000298139.7	protein_coding		3675		chr8	TogoVar
WWC1_chr5_168286645_168477303	168339833	T T	TCTTTCTT others(26): Show TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	intron_variant intron_variant	MODIFIER	HG02897.hp2 HG02897.hp2	a0002 a0002	a0002c0006 a0002c0006	a0002c0006t0015 a0002c0006t0015	a0002c0006t0015g0022 a0002c0006t0015g0022	1	254	0.0039	33	c.120 others(52): Show c.120-31591_120-31590insCTTTCTTTCTTTCTTTCTTTCTTTCT TTCTTTC	WWC1	ENSG00000113645.15	transcript	ENST00000265293.9	protein_coding	1/22			chr5	TogoVar
WWOX_chr16_78094654_79217667	78621592	C C	CTTTTTTT others(26): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03942.hp1 HG03942.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0075 a0001c0001t0003g0075	1	142	0.0070	33	c.105 others(56): Show c.1056+188870_1056+188871insTTTTTTTTTTTTTTTTTTTTTT TTTTTTTTTTT	WWOX	ENSG00000186153.19	transcript	ENST00000566780.6	protein_coding	8/8		INFO_REALIGN_3_PRIME	chr16	TogoVar
WWOX_chr16_78094654_79217667	78718092	G G	GTTTTTTT others(26): Show GTTTTTTTTTTTTTTTTATTTTTTTTTTATTTTT	intron_variant intron_variant	MODIFIER	HG03831.hp1 HG03831.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0022 a0001c0001t0001g0022	1	142	0.0070	33	c.105 others(56): Show c.1056+285342_1056+285343insTTTTTTTTTTTTTTATTTTTTT TTTATTTTTTT	WWOX	ENSG00000186153.19	transcript	ENST00000566780.6	protein_coding	8/8		INFO_REALIGN_3_PRIME	chr16	TogoVar
WWOX_chr16_78094654_79217667	78718092	G G	GTTTTTTT others(26): Show GTTTTTTTTTTTTTTTTTTTATTTTTTTATTTTT	intron_variant intron_variant	MODIFIER	HG03579.hp2 HG03579.hp2	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0004 a0003c0004t0004	a0003c0004t0004g0013 a0003c0004t0004g0013	1	142	0.0070	33	c.105 others(56): Show c.1056+285342_1056+285343insTTTTTTTTTTTTTTTTTATTTT TTTATTTTTTT	WWOX	ENSG00000186153.19	transcript	ENST00000566780.6	protein_coding	8/8		INFO_REALIGN_3_PRIME	chr16	TogoVar
WWOX_chr16_78094654_79217667	78718092	G G	GTTTTTTT others(26): Show GTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTTT	intron_variant intron_variant	MODIFIER	HG02559.hp2 HG02559.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0012 a0001c0001t0001g0012	1	142	0.0070	33	c.105 others(56): Show c.1056+285342_1056+285343insTTTTTTTTTTTTTTTTTTTTTT TTAATTTTTTT	WWOX	ENSG00000186153.19	transcript	ENST00000566780.6	protein_coding	8/8		INFO_REALIGN_3_PRIME	chr16	TogoVar
WWOX_chr16_78094654_79217667	78718092	G G	GTTTTTTT others(26): Show GTTTTTTTTTTTTTTTTTTTTTTTTTTTATTTTT	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG02486.hp2	a0005 a0005	a0005c0005 a0005c0005	a0005c0005t0001 a0005c0005t0001	a0005c0005t0001g0059 a0005c0005t0001g0059	1	142	0.0070	33	c.105 others(56): Show c.1056+285342_1056+285343insTTTTTTTTTTTTTTTTTTTTTT TTTATTTTTTT	WWOX	ENSG00000186153.19	transcript	ENST00000566780.6	protein_coding	8/8		INFO_REALIGN_3_PRIME	chr16	TogoVar
WWOX_chr16_78094654_79217667	78718092	G G	GTTTTTTT others(26): Show GTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTTT	intron_variant intron_variant	MODIFIER	HG02965.hp2 HG02965.hp2	a0002 a0002	a0002c0022 a0002c0022	a0002c0022t0007 a0002c0022t0007	a0002c0022t0007g0109 a0002c0022t0007g0109	1	142	0.0070	33	c.105 others(56): Show c.1056+285342_1056+285343insTTTTTTTTTTTTTTTTTTTTTT TTTTATTTTTT	WWOX	ENSG00000186153.19	transcript	ENST00000566780.6	protein_coding	8/8		INFO_REALIGN_3_PRIME	chr16	TogoVar
WWP1_chr8_86337547_86473503	86362163	C C	CATATATA others(26): Show CATATATATATATATATATATATATAAGGCATAT	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG02922.hp2 HG02559.hp1 HG02922.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0291 a0001c0002t0001g0293 a0001c0002t0001g0291 a0001c0002t0001g0293	2	300	0.0067	33	c.-11 others(52): Show c.-114-6751_-114-6750insAGGCATATATATATATATATATATAT ATATATA	WWP1	ENSG00000123124.14	transcript	ENST00000517970.6	protein_coding	1/24		INFO_REALIGN_3_PRIME	chr8	TogoVar
WWTR1_chr3_149512235_149663025	149659331	A A	ATTTTTTT others(26): Show ATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03516.hp1 HG03516.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0290 a0001c0001t0006g0290	1	334	0.0030	33	c.-15 others(44): Show c.-1571_-1570insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	WWTR1	ENSG00000018408.15	transcript	ENST00000360632.8	protein_coding		1307		chr3	TogoVar
XAF1_chr17_6751046_6780647	6751531	A A	AAAGAAGA others(26): Show AAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02723.hp1 HG03225.hp2 HG02723.hp1 HG03225.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0015 a0001c0001t0001 a0001c0001t0015	a0001c0001t0001g0013 a0001c0001t0015g0013 a0001c0001t0001g0013 a0001c0001t0015g0013	2	448	0.0045	33	c.-45 others(44): Show c.-4548_-4547insAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG	XAF1	ENSG00000132530.17	transcript	ENST00000361842.8	protein_coding		4514		chr17	TogoVar
XAF1_chr17_6751046_6780647	6751534	A A	AAAGAAGA others(26): Show AAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00673.hp1 HG02071.hp1 NA18943.hp1 others(2): Show HG00673.hp1 HG02071.hp1 NA18943.hp1 NA19064.hp1 NA19085.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0003 a0001c0001 a0001c0002 a0002c0003	a0001c0001t0001 a0001c0002t0003 a0001c0002t0032 others(1): Show a0001c0001t0001 a0001c0002t0003 a0001c0002t0032 a0002c0003t0001	a0001c0001t0001g0002 a0001c0002t0003g0006 a0001c0002t0032g0104 others(1): Show a0001c0001t0001g0002 a0001c0002t0003g0006 a0001c0002t0032g0104 a0002c0003t0001g0007	5	448	0.0112	33	c.-45 others(44): Show c.-4545_-4544insAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG	XAF1	ENSG00000132530.17	transcript	ENST00000361842.8	protein_coding		4511		chr17	TogoVar
XIAP_chrX_123855053_123918972	123869362	C C	CAAAAAAA others(26): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA19066.hp1 NA19066.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0004 a0003c0003t0004	a0003c0003t0004g0269 a0003c0003t0004g0269	1	286	0.0035	33	c.-33 others(50): Show c.-33+9091_-33+9092insAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAA	XIAP	ENSG00000101966.14	transcript	ENST00000371199.8	protein_coding	1/6		INFO_REALIGN_3_PRIME	chrX	TogoVar
XIRP2_chr2_166883480_167264753	167201270	G G	GAGGGAAG others(26): Show GAGGGAAGGAAGGAAGGAAAGAACGAAGGAAGGA	intron_variant intron_variant	MODIFIER	HG02056.hp1 HG02258.hp1 HG02896.hp1 others(12): Show HG02056.hp1 HG02258.hp1 HG02896.hp1 HG02897.hp2 HG03453.hp2 HG03654.hp2 NA18942.hp1 NA18948.hp1 NA18973.hp1 NA18977.hp1 NA18999.hp1 NA19043.hp1 NA19060.hp2 NA19074.hp2 NA19082.hp1	a0001 a0002 a0004 others(2): Show a0001 a0002 a0004 a0005 a0012	a0001c0001 a0001c0010 a0001c0016 others(7): Show a0001c0001 a0001c0010 a0001c0016 a0001c0018 a0001c0030 a0002c0002 a0004c0005 a0005c0007 a0005c0034 a0012c0014	a0001c0001t0001 a0001c0010t0001 a0001c0016t0001 others(7): Show a0001c0001t0001 a0001c0010t0001 a0001c0016t0001 a0001c0018t0001 a0001c0030t0016 a0002c0002t0002 a0004c0005t0003 a0005c0007t0006 a0005c0034t0006 a0012c0014t0003	a0001c0001t0001g0121 a0001c0010t0001g0119 a0001c0016t0001g0165 others(12): Show a0001c0001t0001g0121 a0001c0010t0001g0119 a0001c0016t0001g0165 a0001c0018t0001g0008 a0001c0018t0001g0009 a0001c0030t0016g0040 a0002c0002t0002g0186 a0004c0005t0003g0086 a0004c0005t0003g0123 a0004c0005t0003g0124 a0004c0005t0003g0173 a0005c0007t0006g0145 a0005c0034t0006g0069 a0012c0014t0003g0091 a0012c0014t0003g0138	15	190	0.0790	33	c.563 others(50): Show c.563-9463_563-9462insGGAAGGAAGGAAGGAAAGAACGAAGGAA GGAAG	XIRP2	ENSG00000163092.22	transcript	ENST00000409195.6	protein_coding	3/10		INFO_REALIGN_3_PRIME	chr2	TogoVar
XIRP2_chr2_166883480_167264753	167201270	G G	GAGGGAAG others(26): Show GAGGGAAGGAAGGAAGGAAAGAAGGAAGGAAGGA	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG06807.hp2 HG02109.hp1 HG06807.hp2	a0007 a0007	a0007c0008 a0007c0008	a0007c0008t0007 a0007c0008t0007	a0007c0008t0007g0059 a0007c0008t0007g0065 a0007c0008t0007g0059 a0007c0008t0007g0065	2	190	0.0105	33	c.563 others(50): Show c.563-9463_563-9462insGGAAGGAAGGAAGGAAAGAAGGAAGGAA GGAAG	XIRP2	ENSG00000163092.22	transcript	ENST00000409195.6	protein_coding	3/10		INFO_REALIGN_3_PRIME	chr2	TogoVar
XKR3_chr22_16778480_16830411	16799413	C C	CAAAAAAA others(26): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA18992.hp2 NA18992.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0308 a0002c0002t0002g0308	1	418	0.0024	33	c.589 others(48): Show c.589+357_589+358insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT TTT	XKR3	ENSG00000172967.8	transcript	ENST00000684488.1	protein_coding	3/3			chr22	TogoVar
XKR4_chr8_55097028_55547054	55247855	C C	CTTTCTTT others(26): Show CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00099.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0085 a0001c0001t0085	a0001c0001t0085g0010 a0001c0001t0085g0010	1	182	0.0055	33	c.807 others(54): Show c.807-109820_807-109819insCTTTCTTTCTTTCTTTCTTTCTTT CTTTCTTTT	XKR4	ENSG00000206579.10	transcript	ENST00000327381.7	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr8	TogoVar
XKR5_chr8_6803517_6840524	6806276	G G	GGGGATGC others(26): Show GGGGATGCGGGGTGAGTGGATGGGACAAGAGTGA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00609.hp2 NA18943.hp1 NA18978.hp2 others(4): Show HG00609.hp2 NA18943.hp1 NA18978.hp2 NA18979.hp1 NA18985.hp2 NA19009.hp1 NA19074.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0002c0005 a0001c0001 a0002c0002 a0002c0005	a0001c0001t0003 a0002c0002t0003 a0002c0005t0003 a0001c0001t0003 a0002c0002t0003 a0002c0005t0003	a0001c0001t0003g0048 a0001c0001t0003g0076 a0001c0001t0003g0154 others(4): Show a0001c0001t0003g0048 a0001c0001t0003g0076 a0001c0001t0003g0154 a0002c0002t0003g0333 a0002c0002t0003g0334 a0002c0002t0003g0356 a0002c0005t0003g0050	7	470	0.0149	33	c.49 others(44): Show c.4921_*4922insTCACTCTTGTCCCATCCACTCACCCCGCATCCC	XKR5	ENSG00000275591.5	transcript	ENST00000618742.3	protein_coding		2240		chr8	TogoVar
XKR9_chr8_70664339_70740942	70687341	T T	TCTTTCTT others(26): Show TCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTTTC	intron_variant intron_variant	MODIFIER	NA18522.hp1 NA18522.hp1	a0005 a0005	a0005c0009 a0005c0009	a0005c0009t0004 a0005c0009t0004	a0005c0009t0004g0166 a0005c0009t0004g0166	1	322	0.0031	33	c.272 others(50): Show c.272+6029_272+6030insTTCTTTCTCTCTTTCCTTTCTTTCTTTC TTTCT	XKR9	ENSG00000221947.8	transcript	ENST00000408926.8	protein_coding	3/4		INFO_REALIGN_3_PRIME	chr8	TogoVar
XPO6_chr16_28092976_28216965	28186374	C C	CTTTTTTT others(26): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02970.hp1 HG02970.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0079 a0001c0001t0001g0079	1	308	0.0033	33	c.4-5 others(46): Show c.4-5344_4-5343insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA A	XPO6	ENSG00000169180.12	transcript	ENST00000304658.10	protein_coding	1/23			chr16	TogoVar
XRCC4_chr5_83072547_83358760	83217358	C C	CAAAAAAA others(26): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02895.hp2 HG02895.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0197 a0001c0002t0001g0197	1	262	0.0038	33	c.745 others(52): Show c.745+12456_745+12457insAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAA	XRCC4	ENSG00000152422.16	transcript	ENST00000396027.9	protein_coding	6/7		INFO_REALIGN_3_PRIME	chr5	TogoVar
XRCC4_chr5_83072547_83358760	83309296	A A	AAAAAAAA others(26): Show AAAAAAAAATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG00735.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0129 a0001c0002t0001g0129	1	262	0.0038	33	c.894 others(52): Show c.894-43834_894-43833insAAAAAAATATATATATATATATATAT ATATATA	XRCC4	ENSG00000152422.16	transcript	ENST00000396027.9	protein_coding	7/7		INFO_REALIGN_3_PRIME	chr5	TogoVar
XRCC4_chr5_83072547_83358760	83309296	A A	AAAAATAT others(26): Show AAAAATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18946.hp1 NA18956.hp1 NA18946.hp1 NA18956.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0003 a0001c0002t0001 a0001c0001t0003 a0001c0002t0001	a0001c0001t0003g0111 a0001c0002t0001g0112 a0001c0001t0003g0111 a0001c0002t0001g0112	2	262	0.0076	33	c.894 others(52): Show c.894-43834_894-43833insAAATATATATATATATATATATATAT ATATATA	XRCC4	ENSG00000152422.16	transcript	ENST00000396027.9	protein_coding	7/7		INFO_REALIGN_3_PRIME	chr5	TogoVar
XRCC6_chr22_41616295_41669041	41649139	A A	AAAAATAT others(26): Show AAAAATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01358.hp2 HG01358.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0046 a0001c0001t0001g0046	1	324	0.0031	33	c.961 others(50): Show c.961-1583_961-1582insAAATATATATATATATATATATATATAT ATATA	XRCC6	ENSG00000196419.13	transcript	ENST00000360079.8	protein_coding	7/12		INFO_REALIGN_3_PRIME	chr22	TogoVar
XRCC6_chr22_41616295_41669041	41649139	A A	ATATATAT others(26): Show ATATATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03704.hp1 HG03704.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0065 a0001c0001t0001g0065	1	324	0.0031	33	c.961 others(50): Show c.961-1584_961-1583insTATATATATATATATATATATATATATA TATAT	XRCC6	ENSG00000196419.13	transcript	ENST00000360079.8	protein_coding	7/12			chr22	TogoVar
XRN2_chr20_21298331_21394825	21365800	A A	ATATATAT others(26): Show ATATATATAATATATGATTATATATTATATATAT	intron_variant intron_variant	MODIFIER	HG03831.hp1 HG03831.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0203 a0001c0001t0002g0203	1	278	0.0036	33	c.245 others(50): Show c.2456+111_2456+143dupGATTATATATTATATATATTATATATAA TATAT	XRN2	ENSG00000088930.8	transcript	ENST00000377191.5	protein_coding	26/29		INFO_REALIGN_3_PRIME	chr20	TogoVar
XYLB_chr3_38341785_38419985	38419603	T T	TATATATA others(26): Show TATATATATATATATATATATATATATATATATA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02056.hp2 NA18964.hp1 HG02056.hp2 NA18964.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0001 a0001c0001t0001 a0002c0002t0001	a0001c0001t0001g0193 a0002c0002t0001g0072 a0001c0001t0001g0193 a0002c0002t0001g0072	2	358	0.0056	33	c.65 others(44): Show c.6590_*6591insATATATATATATATATATATATATATATATATA	XYLB	ENSG00000093217.11	transcript	ENST00000207870.8	protein_coding		4619		chr3	TogoVar
XYLT1_chr16_17096769_17475960	17137794	G G	GAAAAGTG others(26): Show GAAAAGTGCAATTCATTAAAAATACAAATTCGTC	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00140.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0021 a0001c0001t0021	a0001c0001t0021g0132 a0001c0001t0021g0132	1	156	0.0064	33	c.176 others(50): Show c.1764+528_1764+560dupGACGAATTTGTATTTTTAATGAATTGCA CTTTT	XYLT1	ENSG00000103489.12	transcript	ENST00000261381.7	protein_coding	8/11			chr16	TogoVar
YBEY_chr21_46281342_46302751	46298434	C C	CTTTTTTT others(26): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00639.hp1 HG02004.hp1 HG02080.hp2 others(7): Show HG00639.hp1 HG02004.hp1 HG02080.hp2 HG02647.hp1 HG02818.hp1 NA18975.hp1 NA18987.hp1 NA19012.hp2 NA19080.hp1 NA19090.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0004 a0001c0001t0001g0034 a0001c0001t0001g0072 others(7): Show a0001c0001t0001g0004 a0001c0001t0001g0034 a0001c0001t0001g0072 a0001c0001t0001g0085 a0001c0001t0001g0101 a0001c0001t0001g0103 a0001c0001t0001g0119 a0001c0001t0001g0123 a0001c0001t0001g0183 a0001c0001t0001g0287	10	404	0.0248	33	c.80 others(42): Show c.800_*801insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	YBEY	ENSG00000182362.14	transcript	ENST00000397701.9	protein_coding		684		chr21	TogoVar
YEATS2_chr3_183692797_183817624	183730254	G G	GGGGTTTT others(26): Show GGGGTTTTGCCATGTTGGCCAGGCTGGTCTTGAA	intron_variant intron_variant	MODIFIER	HG03098.hp1 HG03098.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0170 a0001c0003t0001g0170	1	310	0.0032	33	c.812 others(50): Show c.812+1404_812+1436dupGGGTTTTGCCATGTTGGCCAGGCTGGTC TTGAA	YEATS2	ENSG00000163872.16	transcript	ENST00000305135.10	protein_coding	7/30		INFO_REALIGN_3_PRIME	chr3	TogoVar
YJU2B_chr19_13742895_13768289	13767038	T T	TATATATA others(26): Show TATATATATATATATATATATATATATATATATA	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18986.hp1 NA18986.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0301 a0001c0001t0001g0301	1	432	0.0023	33	c.39 others(44): Show c.3970_*3971insATATATATATATATATATATATATATATATATA	YJU2B	ENSG00000104957.14	transcript	ENST00000221554.13	protein_coding		3750		chr19	TogoVar
YME1L1_chr10_27105111_27159384	27149711	C C	CAAAAAAA others(26): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA18991.hp2 NA19058.hp2 NA18991.hp2 NA19058.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0004 a0001c0002t0004	a0001c0002t0004g0114 a0001c0002t0004g0115 a0001c0002t0004g0114 a0001c0002t0004g0115	2	388	0.0052	33	c.34- others(46): Show c.34-672_34-671insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT T	YME1L1	ENSG00000136758.20	transcript	ENST00000376016.8	protein_coding	1/18			chr10	TogoVar
YPEL2_chr17_59326655_59406729	59405424	T T	TTATAAAA others(26): Show TTATAAAAAAAAAAAAAAAAAATATATATATATA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03453.hp1 HG03453.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0065 a0001c0001t0065	a0001c0001t0065g0099 a0001c0001t0065g0099	1	350	0.0029	33	c.82 others(44): Show c.8234_*8235insTATAAAAAAAAAAAAAAAAAATATATATATATA	YPEL2	ENSG00000175155.11	transcript	ENST00000312655.9	protein_coding		3696		chr17	TogoVar
YPEL2_chr17_59326655_59406729	59405424	T T	TTATAAAA others(26): Show TTATAAAAAAAAAAAAAAAATATATATATATATA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02257.hp1 HG02257.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0012 a0001c0001t0012	a0001c0001t0012g0232 a0001c0001t0012g0232	1	350	0.0029	33	c.82 others(44): Show c.8234_*8235insTATAAAAAAAAAAAAAAAATATATATATATATA	YPEL2	ENSG00000175155.11	transcript	ENST00000312655.9	protein_coding		3696		chr17	TogoVar
YPEL2_chr17_59326655_59406729	59405456	A A	ATATATAT others(26): Show ATATATATATATATATATATATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01257.hp1 HG01257.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0116 a0001c0001t0001g0116	1	350	0.0029	33	c.82 others(44): Show c.8266_*8267insTATATATATATATATATATATATATATATATAT	YPEL2	ENSG00000175155.11	transcript	ENST00000312655.9	protein_coding		3728		chr17	TogoVar
YPEL2_chr17_59326655_59406729	59405456	A A	ATATATAT others(26): Show ATATATATATATATATATATATATATATATATTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00639.hp1 NA18977.hp1 HG00639.hp1 NA18977.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0019 a0001c0001t0001 a0001c0001t0019	a0001c0001t0001g0162 a0001c0001t0019g0339 a0001c0001t0001g0162 a0001c0001t0019g0339	2	350	0.0057	33	c.82 others(44): Show c.8266_*8267insTATATATATATATATATATATATATATATATTT	YPEL2	ENSG00000175155.11	transcript	ENST00000312655.9	protein_coding		3728		chr17	TogoVar
YWHAE_chr17_1339275_1405222	1394436	C C	CAAAAAAA others(26): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02572.hp2 HG02572.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0133 a0001c0001t0011g0133	1	373	0.0027	33	c.64+ others(48): Show c.64+5610_64+5611insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT TTT	YWHAE	ENSG00000108953.17	transcript	ENST00000264335.13	protein_coding	1/5			chr17	TogoVar
YWHAQ_chr2_9578967_9635997	9602862	A A	ATATATAT others(26): Show ATATATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA19000.hp1 NA19000.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0057 a0001c0001t0001g0057	1	272	0.0037	33	c.295 others(52): Show c.295-11348_295-11347insATATATATATATATATATATATATAT ATATATA	YWHAQ	ENSG00000134308.14	transcript	ENST00000238081.8	protein_coding	2/5			chr2	TogoVar
ZAN_chr7_100728595_100802797	100742878	A A	AGGGAGGG others(26): Show AGGGAGGGGGGAGGGGGAGGGGGGAGGGGGGAGG	intron_variant intron_variant	MODIFIER	NA19090.hp1 NA19090.hp1	a0007 a0007	a0007c0071 a0007c0071	a0007c0071t0001 a0007c0071t0001	a0007c0071t0001g0241 a0007c0071t0001g0241	1	308	0.0033	33	c.767 others(50): Show c.767-3651_767-3650insGAGGGGGAGGGGGGAGGGGGGAGGGGGA GGGGG	ZAN	ENSG00000146839.19	transcript	ENST00000613979.5	protein_coding	7/47		INFO_REALIGN_3_PRIME	chr7	TogoVar
ZAN_chr7_100728595_100802797	100792982	C C	CAAAAAAA others(26): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01167.hp1 HG01256.hp1 HG01167.hp1 HG01256.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0254 a0003c0003t0001g0255 a0003c0003t0001g0254 a0003c0003t0001g0255	2	308	0.0065	33	c.778 others(50): Show c.7787+518_7787+519insAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAA	ZAN	ENSG00000146839.19	transcript	ENST00000613979.5	protein_coding	42/47		INFO_REALIGN_3_PRIME	chr7	TogoVar
ZAP70_chr2_97708576_97744860	97717436	G G	GGAGCCTC others(26): Show GGAGCCTCTGGCTGGGGGGACACGAGGAGCCTCT	intron_variant intron_variant	MODIFIER	HG01069.hp1 HG01081.hp1 HG01069.hp1 HG01081.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0241 a0001c0002t0003g0242 a0001c0002t0003g0241 a0001c0002t0003g0242	2	368	0.0054	33	c.-22 others(50): Show c.-22+3466_-22+3498dupAGGAGCCTCTGAGCCTCTGGCTGGGGGG ACACG	ZAP70	ENSG00000115085.15	transcript	ENST00000264972.10	protein_coding	2/13		INFO_REALIGN_3_PRIME	chr2	TogoVar
ZBBX_chr3_167234843_167385297	167330862	G G	GAGAAGAA others(26): Show GAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA	intron_variant intron_variant	MODIFIER	HG01934.hp2 HG02683.hp2 HG03688.hp1 others(2): Show HG01934.hp2 HG02683.hp2 HG03688.hp1 NA18747.hp2 NA19085.hp2	a0003 a0005 a0003 a0005	a0003c0003 a0005c0005 a0003c0003 a0005c0005	a0003c0003t0001 a0005c0005t0001 a0003c0003t0001 a0005c0005t0001	a0003c0003t0001g0009 a0003c0003t0001g0010 a0005c0005t0001g0062 others(2): Show a0003c0003t0001g0009 a0003c0003t0001g0010 a0005c0005t0001g0062 a0005c0005t0001g0063 a0005c0005t0001g0067	5	290	0.0172	33	c.688 others(50): Show c.688-2747_688-2746insTCTTCTTCTTCTTCTTCTTCTTCTTCTT CTTCT	ZBBX	ENSG00000169064.13	transcript	ENST00000675490.1	protein_coding	10/21			chr3	TogoVar
ZBBX_chr3_167234843_167385297	167330865	G G	GAGAAGAA others(26): Show GAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA	intron_variant intron_variant	MODIFIER	HG01934.hp1 HG01934.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0092 a0003c0003t0001g0092	1	290	0.0035	33	c.688 others(50): Show c.688-2750_688-2749insTCTTCTTCTTCTTCTTCTTCTTCTTCTT CTTCT	ZBBX	ENSG00000169064.13	transcript	ENST00000675490.1	protein_coding	10/21			chr3	TogoVar

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