Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
TRAPPC3L_chr6_116489989_116550684	116494961	A A	ATATATAT others(27): Show ATATATATATATATATATATATATATATTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02615.hp2 HG02615.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0013 a0001c0001t0013	a0001c0001t0013g0248 a0001c0001t0013g0248	1	360	0.0028	34	c.19 others(45): Show c.1992_*1993insAAAAAAAATATATATATATATATATATATATATA	TRAPPC3L	ENSG00000173626.10	transcript	ENST00000368602.4	protein_coding		27		chr6	TogoVar
TRAPPC3L_chr6_116489989_116550684	116494961	A A	ATATATAT others(27): Show ATATATATATATATATATATATATATTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02258.hp1 HG02258.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0245 a0001c0001t0001g0245	1	360	0.0028	34	c.19 others(45): Show c.1992_*1993insAAAAAAAAAATATATATATATATATATATATATA	TRAPPC3L	ENSG00000173626.10	transcript	ENST00000368602.4	protein_coding		27		chr6	TogoVar
TRAPPC9_chr8_139722725_140462744	139817045	A A	AACACACA others(27): Show AACACACACACACACACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG02717.hp1 HG03209.hp2 HG02717.hp1 HG03209.hp2	a0001 a0001	a0001c0002 a0001c0007 a0001c0002 a0001c0007	a0001c0002t0013 a0001c0007t0015 a0001c0002t0013 a0001c0007t0015	a0001c0002t0013g0005 a0001c0007t0015g0018 a0001c0002t0013g0005 a0001c0007t0015g0018	2	98	0.0204	34	c.305 others(55): Show c.3055+68800_3055+68833dupGTGTGTGTGTGTGTGTGTGTGTGT GTGTGTGTGT	TRAPPC9	ENSG00000167632.18	transcript	ENST00000438773.4	protein_coding	21/22			chr8	TogoVar
TRAPPC9_chr8_139722725_140462744	139947894	G G	GTGTGTAT others(27): Show GTGTGTATATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG03209.hp1 HG03209.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0004 a0001c0004t0004	a0001c0004t0004g0094 a0001c0004t0004g0094	1	98	0.0102	34	c.281 others(55): Show c.2811-37595_2811-37594insTATATATATATATATATATATATA TATATACACA	TRAPPC9	ENSG00000167632.18	transcript	ENST00000438773.4	protein_coding	19/22			chr8	TogoVar
TRAPPC9_chr8_139722725_140462744	139947894	G G	GTGTGTGT others(27): Show GTGTGTGTATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02486.hp1 HG02486.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0001 a0001c0004t0001	a0001c0004t0001g0093 a0001c0004t0001g0093	1	98	0.0102	34	c.281 others(55): Show c.2811-37595_2811-37594insTATATATATATATATATATATATA TATACACACA	TRAPPC9	ENSG00000167632.18	transcript	ENST00000438773.4	protein_coding	19/22			chr8	TogoVar
TRAPPC9_chr8_139722725_140462744	139947907	T T	TATATATA others(27): Show TATATATATATATATATAGAGAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02055.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0002	a0001c0003t0002g0020 a0001c0003t0002g0020	1	98	0.0102	34	c.281 others(55): Show c.2811-37608_2811-37607insCTCTCTCTCTCTCTCTCTATATAT ATATATATAT	TRAPPC9	ENSG00000167632.18	transcript	ENST00000438773.4	protein_coding	19/22			chr8	TogoVar
TRAPPC9_chr8_139722725_140462744	139947907	T T	TATATATA others(27): Show TATATATATATATATATATAGAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	NA20300.hp1 NA20300.hp1	a0001 a0001	a0001c0019 a0001c0019	a0001c0019t0031 a0001c0019t0031	a0001c0019t0031g0055 a0001c0019t0031g0055	1	98	0.0102	34	c.281 others(55): Show c.2811-37608_2811-37607insCTCTCTCTCTCTCTCTATATATAT ATATATATAT	TRAPPC9	ENSG00000167632.18	transcript	ENST00000438773.4	protein_coding	19/22			chr8	TogoVar
TRARG1_chr17_1274662_1305978	1288941	C C	CGGGCTCC others(27): Show CGGGCTCCCCATCCCCCTCCAGCTTCTCATCCCCA	intron_variant intron_variant	MODIFIER	NA19080.hp1 NA19080.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0048 a0001c0001t0001g0048	1	402	0.0025	34	c.388 others(51): Show c.388-6550_388-6549insGGGCTCCCCATCCCCCTCCAGCTTCTCA TCCCCA	TRARG1	ENSG00000184811.4	transcript	ENST00000333813.4	protein_coding	1/2			chr17	TogoVar
TRAT1_chr3_108817786_108860005	108844466	T T	TTAATTTA others(27): Show TTAATTTAAATTTAATTTAAATTTAAATTAAATTC	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02257.hp2 HG02486.hp1 others(6): Show HG02055.hp1 HG02257.hp2 HG02486.hp1 HG02922.hp1 HG02965.hp2 HG02970.hp1 HG03139.hp1 HG06807.hp2 NA20300.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0015 a0002c0002t0002g0027 a0002c0002t0002g0123 others(4): Show a0002c0002t0002g0015 a0002c0002t0002g0027 a0002c0002t0002g0123 a0002c0002t0002g0126 a0002c0002t0002g0129 a0002c0002t0002g0254 a0002c0002t0002g0263	9	340	0.0265	34	c.153 others(51): Show c.153-2602_153-2601insTAATTTAAATTTAATTTAAATTTAAATT AAATTC	TRAT1	ENSG00000163519.14	transcript	ENST00000295756.11	protein_coding	3/5			chr3	TogoVar
TRDN_chr6_123211339_123641950	123283985	C C	CATATATA others(27): Show CATATATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG02897.hp1 HG03139.hp1 others(2): Show HG00423.hp2 HG02897.hp1 HG03139.hp1 HG03139.hp2 HG04115.hp2	a0001 a0003 a0005 others(2): Show a0001 a0003 a0005 a0019 a0028	a0001c0001 a0003c0003 a0005c0006 others(2): Show a0001c0001 a0003c0003 a0005c0006 a0019c0028 a0028c0026	a0001c0001t0003 a0003c0003t0002 a0005c0006t0001 others(2): Show a0001c0001t0003 a0003c0003t0002 a0005c0006t0001 a0019c0028t0013 a0028c0026t0017	a0001c0001t0003g0036 a0003c0003t0002g0008 a0005c0006t0001g0092 others(2): Show a0001c0001t0003g0036 a0003c0003t0002g0008 a0005c0006t0001g0092 a0019c0028t0013g0129 a0028c0026t0017g0096	5	152	0.0329	34	c.151 others(53): Show c.1511-4904_1511-4903insATATATATATATATATATATATATAT ATATATAT	TRDN	ENSG00000186439.15	transcript	ENST00000334268.9	protein_coding	24/40			chr6	TogoVar
TRDN_chr6_123211339_123641950	123301741	G G	GTATATAT others(27): Show GTATATATATACATATATATATATATATACATATA	intron_variant intron_variant	MODIFIER	HG01981.hp2 HG02451.hp2 HG02818.hp1 HG01981.hp2 HG02451.hp2 HG02818.hp1	a0001 a0002 a0018 a0001 a0002 a0018	a0001c0001 a0002c0004 a0018c0029 a0001c0001 a0002c0004 a0018c0029	a0001c0001t0006 a0002c0004t0006 a0018c0029t0006 a0001c0001t0006 a0002c0004t0006 a0018c0029t0006	a0001c0001t0006g0089 a0002c0004t0006g0016 a0018c0029t0006g0093 a0001c0001t0006g0089 a0002c0004t0006g0016 a0018c0029t0006g0093	3	152	0.0197	34	c.151 others(55): Show c.1510+14682_1510+14715dupTATATGTATATATATATATATATG TATATATATA	TRDN	ENSG00000186439.15	transcript	ENST00000334268.9	protein_coding	24/40			chr6	TogoVar
TRDN_chr6_123211339_123641950	123301752	C C	CATATATA others(27): Show CATATATATATATATACATATATATATATATACAT	intron_variant intron_variant	MODIFIER	HG02622.hp2 HG02622.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0018 a0001c0001t0018	a0001c0001t0018g0029 a0001c0001t0018g0029	1	152	0.0066	34	c.151 others(55): Show c.1510+14704_1510+14705insATGTATATATATATATATGTATAT ATATATATAT	TRDN	ENSG00000186439.15	transcript	ENST00000334268.9	protein_coding	24/40			chr6	TogoVar
TRDN_chr6_123211339_123641950	123499719	A A	AAAAAAAA others(27): Show AAAAAAAAAAAAAAAAAATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18747.hp2 NA20905.hp1 NA18747.hp2 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0018 a0001c0001t0003g0025 a0001c0001t0001g0018 a0001c0001t0003g0025	2	152	0.0132	34	c.794 others(51): Show c.794-2468_794-2467insATATATATATATATATATTTTTTTTTTT TTTTTT	TRDN	ENSG00000186439.15	transcript	ENST00000334268.9	protein_coding	8/40			chr6	TogoVar
TRDN_chr6_123211339_123641950	123499719	A A	AAAAAAAA others(27): Show AAAAAAAAAAAAAAAATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18747.hp1 NA20129.hp1 NA18747.hp1 NA20129.hp1	a0001 a0002 a0001 a0002	a0001c0002 a0002c0004 a0001c0002 a0002c0004	a0001c0002t0003 a0002c0004t0001 a0001c0002t0003 a0002c0004t0001	a0001c0002t0003g0132 a0002c0004t0001g0048 a0001c0002t0003g0132 a0002c0004t0001g0048	2	152	0.0132	34	c.794 others(51): Show c.794-2468_794-2467insATATATATATATATATATATTTTTTTTT TTTTTT	TRDN	ENSG00000186439.15	transcript	ENST00000334268.9	protein_coding	8/40			chr6	TogoVar
TRDN_chr6_123211339_123641950	123551203	G G	GATATATA others(27): Show GATATATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01074.hp1 HG02572.hp1 HG01074.hp1 HG02572.hp1	a0002 a0022 a0002 a0022	a0002c0005 a0022c0033 a0002c0005 a0022c0033	a0002c0005t0002 a0022c0033t0002 a0002c0005t0002 a0022c0033t0002	a0002c0005t0002g0015 a0022c0033t0002g0135 a0002c0005t0002g0015 a0022c0033t0002g0135	2	152	0.0132	34	c.233 others(51): Show c.233-2592_233-2591insATATATATATATATATATATATATATAT ATATAT	TRDN	ENSG00000186439.15	transcript	ENST00000334268.9	protein_coding	2/40			chr6	TogoVar
TRERF1_chr6_42219931_42456926	42408313	A A	ATGTGTGT others(27): Show ATGTGTGTGTATATATATATATACATACACGTGTG	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00140.hp1	a0001 a0001	a0001c0014 a0001c0014	a0001c0014t0001 a0001c0014t0001	a0001c0014t0001g0114 a0001c0014t0001g0114	1	180	0.0056	34	c.-45 others(55): Show c.-454+42830_-454+42863dupCACACGTGTATGTATATATATATA TACACACACA	TRERF1	ENSG00000124496.13	transcript	ENST00000695948.1	protein_coding	2/17			chr6	TogoVar
TRIM24_chr7_138455259_138594996	138493182	G G	GACAGTTG others(27): Show GACAGTTGATTTAACATTTTTGACAGTTGATTTAA	intron_variant intron_variant	MODIFIER	HG02922.hp1 NA18906.hp2 HG02922.hp1 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0008 a0001c0001t0003 a0001c0001t0008	a0001c0001t0003g0270 a0001c0001t0008g0272 a0001c0001t0003g0270 a0001c0001t0008g0272	2	312	0.0064	34	c.365 others(53): Show c.365-11108_365-11107insACAGTTGATTTAACATTTTTGACAGT TGATTTAA	TRIM24	ENSG00000122779.18	transcript	ENST00000343526.9	protein_coding	1/18			chr7	TogoVar
TRIM2_chr4_153199443_153344317	153244319	C C	CTCCTCCT others(27): Show CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTCTCT	intron_variant intron_variant	MODIFIER	HG03831.hp1 HG03831.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0145 a0001c0002t0002g0145	1	268	0.0037	34	c.31- others(51): Show c.31-26014_31-26013insCTCCTCCTCCTCCTCCTCCTCCTCCTCT CTCTTC	TRIM2	ENSG00000109654.16	transcript	ENST00000338700.10	protein_coding	1/11		INFO_REALIGN_3_PRIME	chr4	TogoVar
TRIM2_chr4_153199443_153344317	153244319	C C	CTCCTCTC others(27): Show CTCCTCTCTCCTCTTCTTCTTCTTCTTCTTCTTCT	intron_variant intron_variant	MODIFIER	NA19002.hp2 NA19002.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0113 a0001c0001t0001g0113	1	268	0.0037	34	c.31- others(51): Show c.31-26014_31-26013insCTCTCTCCTCTTCTTCTTCTTCTTCTTC TTCTTC	TRIM2	ENSG00000109654.16	transcript	ENST00000338700.10	protein_coding	1/11		INFO_REALIGN_3_PRIME	chr4	TogoVar
TRIM37_chr17_58993202_59111880	58998073	G G	GGCATCAC others(27): Show GGCATCACTCCTCGCCATTAGACTAAACACAAACT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02071.hp1 HG02071.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0146 a0001c0001t0002g0146	1	342	0.0029	34	c.12 others(45): Show c.1270_*1303dupAGTTTGTGTTTAGTCTAATGGCGAGGAGTGATGC	TRIM37	ENSG00000108395.14	transcript	ENST00000262294.12	protein_coding		128		chr17	TogoVar
TRIM44_chr11_35657775_35823007	35792111	A A	ACACACAC others(27): Show ACACACACACACACACACACACACACACACACTCT	intron_variant intron_variant	MODIFIER	HG01069.hp1 HG01071.hp2 HG02486.hp1 HG01069.hp1 HG01071.hp2 HG02486.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0050 a0001c0001t0006 a0001c0001t0050	a0001c0001t0006g0002 a0001c0001t0050g0382 a0001c0001t0006g0002 a0001c0001t0050g0382	3	392	0.0077	34	c.100 others(55): Show c.1008-14246_1008-14245insACACACACACACACACACACACAC ACACACTCTC	TRIM44	ENSG00000166326.7	transcript	ENST00000299413.7	protein_coding	4/4		INFO_REALIGN_3_PRIME	chr11	TogoVar
TRIM49D1_chr11_89906409_89927245	89909111	T T	TATATAAA others(27): Show TATATAAATATTTGTATATTTATATTTTATATGAA	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18945.hp1 NA18945.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0007 a0001c0001t0001g0007	1	208	0.0048	34	c.24 others(45): Show c.2475_*2476insTTCATATAAAATATAAATATACAAATATTTATAT	TRIM49D1	ENSG00000223417.9	transcript	ENST00000420869.3	protein_coding		2297		chr11	TogoVar
TRIM4_chr7_99885403_99924530	99923748	A A	ACTGAACT others(27): Show ACTGAACTGACATTGGAACCACAACCCTCAGAAGG	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18969.hp2 NA18969.hp2	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0001 a0002c0004t0001	a0002c0004t0001g0007 a0002c0004t0001g0007	1	322	0.0031	34	c.-43 others(45): Show c.-4381_-4348dupCCTTCTGAGGGTTGTGGTTCCAATGTCAGTTCAG	TRIM4	ENSG00000146833.16	transcript	ENST00000349062.7	protein_coding		4219		chr7	TogoVar
TRIM51_chr11_55878297_55896810	55884157	C C	CTATATAT others(27): Show CTATATATATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	NA18946.hp1 NA18951.hp1 NA18971.hp2 NA18946.hp1 NA18951.hp1 NA18971.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0002c0002 a0003c0003 a0001c0001 a0002c0002 a0003c0003	a0001c0001t0001 a0002c0002t0001 a0003c0003t0001 a0001c0001t0001 a0002c0002t0001 a0003c0003t0001	a0001c0001t0001g0083 a0002c0002t0001g0154 a0003c0003t0001g0156 a0001c0001t0001g0083 a0002c0002t0001g0154 a0003c0003t0001g0156	3	436	0.0069	34	c.-5+ others(47): Show c.-5+799_-5+800insTATATATATATATATATATATATATATATATA TA	TRIM51	ENSG00000124900.12	transcript	ENST00000449290.6	protein_coding	1/6		INFO_REALIGN_3_PRIME	chr11	TogoVar
TRIM51_chr11_55878297_55896810	55884182	T T	TATATATA others(27): Show TATATATATATATATATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	HG02071.hp1 HG02071.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0174 a0002c0002t0002g0174	1	436	0.0023	34	c.-5+ others(47): Show c.-5+799_-5+800insTATATATATATATATATATATATATATATATA CA	TRIM51	ENSG00000124900.12	transcript	ENST00000449290.6	protein_coding	1/6		INFO_REALIGN_3_PRIME	chr11	TogoVar
TRIM66_chr11_8607040_8687665	8622365	C C	CACACACA others(27): Show CACACACACACACACACACACATATATATATATAT	intron_variant intron_variant	MODIFIER	HG04199.hp1 HG04199.hp1	a0011 a0011	a0011c0011 a0011c0011	a0011c0011t0004 a0011c0011t0004	a0011c0011t0004g0274 a0011c0011t0004g0274	1	390	0.0026	34	c.308 others(51): Show c.3080+450_3080+451insATATATATATATATGTGTGTGTGTGTGT GTGTGT	TRIM66	ENSG00000166436.18	transcript	ENST00000646038.2	protein_coding	18/24			chr11	TogoVar
TRIM66_chr11_8607040_8687665	8622365	C C	CACACACA others(27): Show CACACACACACACACACACATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18962.hp1 NA18962.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0326 a0001c0001t0001g0326	1	390	0.0026	34	c.308 others(51): Show c.3080+450_3080+451insATATATATATATATATGTGTGTGTGTGT GTGTGT	TRIM66	ENSG00000166436.18	transcript	ENST00000646038.2	protein_coding	18/24			chr11	TogoVar
TRIM66_chr11_8607040_8687665	8622365	C C	CACACACA others(27): Show CACACACACACACACACATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03704.hp2 NA19068.hp1 NA19090.hp2 HG03704.hp2 NA19068.hp1 NA19090.hp2	a0001 a0001	a0001c0001 a0001c0026 a0001c0001 a0001c0026	a0001c0001t0001 a0001c0001t0010 a0001c0026t0001 a0001c0001t0001 a0001c0001t0010 a0001c0026t0001	a0001c0001t0001g0044 a0001c0001t0010g0041 a0001c0026t0001g0031 a0001c0001t0001g0044 a0001c0001t0010g0041 a0001c0026t0001g0031	3	390	0.0077	34	c.308 others(51): Show c.3080+450_3080+451insATATATATATATATATATGTGTGTGTGT GTGTGT	TRIM66	ENSG00000166436.18	transcript	ENST00000646038.2	protein_coding	18/24			chr11	TogoVar
TRIM66_chr11_8607040_8687665	8622365	C C	CACACACA others(27): Show CACACACACACACACATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18989.hp2 NA21309.hp2 NA18989.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0015 a0001c0001t0010 a0001c0001t0015	a0001c0001t0010g0042 a0001c0001t0015g0354 a0001c0001t0010g0042 a0001c0001t0015g0354	2	390	0.0051	34	c.308 others(51): Show c.3080+450_3080+451insATATATATATATATATATATGTGTGTGT GTGTGT	TRIM66	ENSG00000166436.18	transcript	ENST00000646038.2	protein_coding	18/24			chr11	TogoVar
TRIM66_chr11_8607040_8687665	8622365	C C	CACACACA others(27): Show CACACACACACACATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG03471.hp2 NA19079.hp1 HG00280.hp1 HG03471.hp2 NA19079.hp1	a0001 a0004 a0010 a0001 a0004 a0010	a0001c0001 a0004c0004 a0010c0010 a0001c0001 a0004c0004 a0010c0010	a0001c0001t0001 a0004c0004t0004 a0010c0010t0001 a0001c0001t0001 a0004c0004t0004 a0010c0010t0001	a0001c0001t0001g0142 a0004c0004t0004g0310 a0010c0010t0001g0140 a0001c0001t0001g0142 a0004c0004t0004g0310 a0010c0010t0001g0140	3	390	0.0077	34	c.308 others(51): Show c.3080+450_3080+451insATATATATATATATATATATATGTGTGT GTGTGT	TRIM66	ENSG00000166436.18	transcript	ENST00000646038.2	protein_coding	18/24			chr11	TogoVar
TRIM66_chr11_8607040_8687665	8622365	C C	CACACACA others(27): Show CACACACACACATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG01168.hp1 HG02818.hp1 HG01081.hp2 HG01168.hp1 HG02818.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0042 a0001c0001t0001 a0001c0001t0042	a0001c0001t0001g0098 a0001c0001t0001g0198 a0001c0001t0042g0092 a0001c0001t0001g0098 a0001c0001t0001g0198 a0001c0001t0042g0092	3	390	0.0077	34	c.308 others(51): Show c.3080+450_3080+451insATATATATATATATATATATATATGTGT GTGTGT	TRIM66	ENSG00000166436.18	transcript	ENST00000646038.2	protein_coding	18/24			chr11	TogoVar
TRIM66_chr11_8607040_8687665	8622365	C C	CACACACA others(27): Show CACACACACATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02698.hp1 HG03486.hp1 HG03490.hp1 others(4): Show HG02698.hp1 HG03486.hp1 HG03490.hp1 HG03492.hp1 NA19000.hp1 NA19063.hp2 NA19066.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0008 a0001c0001t0001g0091 a0001c0001t0001g0105 others(3): Show a0001c0001t0001g0008 a0001c0001t0001g0091 a0001c0001t0001g0105 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0001g0320	7	390	0.0180	34	c.308 others(51): Show c.3080+450_3080+451insATATATATATATATATATATATATATGT GTGTGT	TRIM66	ENSG00000166436.18	transcript	ENST00000646038.2	protein_coding	18/24			chr11	TogoVar
TRIM66_chr11_8607040_8687665	8622365	C C	CACACACA others(27): Show CACACACATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA19088.hp2 NA19088.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0298 a0001c0001t0001g0298	1	390	0.0026	34	c.308 others(51): Show c.3080+450_3080+451insATATATATATATATATATATATATATAT GTGTGT	TRIM66	ENSG00000166436.18	transcript	ENST00000646038.2	protein_coding	18/24			chr11	TogoVar
TRIM69_chr15_44731528_44772827	44768654	C C	CATATATA others(27): Show CATATATATATATATATATATATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00140.hp2 HG00642.hp1 HG00733.hp1 others(19): Show HG00140.hp2 HG00642.hp1 HG00733.hp1 HG01256.hp2 HG01952.hp1 HG01981.hp2 HG02055.hp2 HG02273.hp2 HG02717.hp2 HG02738.hp1 HG02895.hp2 HG02897.hp1 HG03195.hp2 HG03225.hp1 HG04228.hp2 NA18522.hp2 NA18949.hp1 NA18952.hp2 NA18988.hp1 NA19058.hp1 NA19075.hp2 NA19090.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0001 a0002c0002 a0003c0003 others(1): Show a0001c0001 a0002c0002 a0003c0003 a0004c0004	a0001c0001t0001 a0002c0002t0001 a0003c0003t0001 others(1): Show a0001c0001t0001 a0002c0002t0001 a0003c0003t0001 a0004c0004t0001	a0001c0001t0001g0003 a0001c0001t0001g0026 a0001c0001t0001g0090 others(17): Show a0001c0001t0001g0003 a0001c0001t0001g0026 a0001c0001t0001g0090 a0001c0001t0001g0110 a0001c0001t0001g0114 a0001c0001t0001g0146 a0001c0001t0001g0176 a0001c0001t0001g0219 a0002c0002t0001g0010 a0002c0002t0001g0113 a0002c0002t0001g0196 a0003c0003t0001g0012 a0003c0003t0001g0052 a0003c0003t0001g0057 a0004c0004t0001g0033 a0004c0004t0001g0228 a0004c0004t0001g0229 a0004c0004t0001g0230 a0004c0004t0001g0231 a0004c0004t0001g0232	22	349	0.0630	34	c.88 others(43): Show c.882_*883insATATATATATATATATATATATATATATATATAT	TRIM69	ENSG00000185880.13	transcript	ENST00000329464.9	protein_coding		828		chr15	TogoVar
TRIM6_chr11_5591637_5617952	5596543	T T	TCCCCCTT others(27): Show TCCCCCTTCCCCCTTCCCCCTTCCCCCTTCCCCTC	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18987.hp2 NA18988.hp2 NA19088.hp1 NA18987.hp2 NA18988.hp2 NA19088.hp1	a0001 a0002 a0001 a0002	a0001c0003 a0002c0006 a0001c0003 a0002c0006	a0001c0003t0001 a0002c0006t0003 a0001c0003t0001 a0002c0006t0003	a0001c0003t0001g0007 a0001c0003t0001g0010 a0002c0006t0003g0007 a0001c0003t0001g0007 a0001c0003t0001g0010 a0002c0006t0003g0007	3	480	0.0063	34	c.-35 others(43): Show c.-355_-354insCCCCCTTCCCCCTTCCCCCTTCCCCCTTCCCCTC	TRIM6	ENSG00000121236.21	transcript	ENST00000380097.8	protein_coding		93		chr11	TogoVar
TRIM6_chr11_5591637_5617952	5596543	T T	TCCCCCTT others(27): Show TCCCCCTTCCCCTCCCCCCTTCCCCCTTCCCCTCC	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18969.hp2 NA18969.hp2	a0002 a0002	a0002c0006 a0002c0006	a0002c0006t0022 a0002c0006t0022	a0002c0006t0022g0198 a0002c0006t0022g0198	1	480	0.0021	34	c.-35 others(43): Show c.-355_-354insCCCCCTTCCCCTCCCCCCTTCCCCCTTCCCCTCC	TRIM6	ENSG00000121236.21	transcript	ENST00000380097.8	protein_coding		93		chr11	TogoVar
TRIO_chr5_14138342_14515204	14140186	A A	ATTTTTTT others(27): Show ATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02647.hp1 HG02647.hp1	a0015 a0015	a0015c0052 a0015c0052	a0015c0052t0008 a0015c0052t0008	a0015c0052t0008g0061 a0015c0052t0008g0061	1	198	0.0051	34	c.-35 others(45): Show c.-3540_-3539insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	TRIO	ENSG00000038382.23	transcript	ENST00000344204.9	protein_coding		3155		chr5	TogoVar
TRIO_chr5_14138342_14515204	14421227	A A	ATTTATTT others(27): Show ATTTATTTATTTTATTTTATTTTATTTTATTTTAT	intron_variant intron_variant	MODIFIER	HG01106.hp1 HG02280.hp1 NA21309.hp1 HG01106.hp1 HG02280.hp1 NA21309.hp1	a0002 a0014 a0002 a0014	a0002c0017 a0002c0039 a0014c0030 a0002c0017 a0002c0039 a0014c0030	a0002c0017t0003 a0002c0039t0003 a0014c0030t0001 a0002c0017t0003 a0002c0039t0003 a0014c0030t0001	a0002c0017t0003g0173 a0002c0039t0003g0188 a0014c0030t0001g0039 a0002c0017t0003g0173 a0002c0039t0003g0188 a0014c0030t0001g0039	3	198	0.0152	34	c.520 others(53): Show c.5203+1213_5203+1214insATTTTATTTTATTTTATTTTATTTTA TTTTATTT	TRIO	ENSG00000038382.23	transcript	ENST00000344204.9	protein_coding	34/56		INFO_REALIGN_3_PRIME	chr5	TogoVar
TRIO_chr5_14138342_14515204	14511670	T T	TATATATT others(27): Show TATATATTTATATATATATTTATATATTTATATAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03209.hp1 HG03209.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0116 a0001c0001t0007g0116	1	198	0.0051	34	c.32 others(45): Show c.3248_*3249insATATATTTATATATATATTTATATATTTATATAA	TRIO	ENSG00000038382.23	transcript	ENST00000344204.9	protein_coding		1467		chr5	TogoVar
TRMT10B_chr9_37748805_37783972	37767513	C C	CAAAAAAA others(27): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00733.hp2 HG02976.hp2 HG03098.hp2 others(1): Show HG00733.hp2 HG02976.hp2 HG03098.hp2 NA18990.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0016 a0001c0001t0001 a0001c0001t0016	a0001c0001t0001g0262 a0001c0001t0001g0263 a0001c0001t0001g0308 others(1): Show a0001c0001t0001g0262 a0001c0001t0001g0263 a0001c0001t0001g0308 a0001c0001t0016g0272	4	388	0.0103	34	c.421 others(49): Show c.421-541_421-540insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAA	TRMT10B	ENSG00000165275.10	transcript	ENST00000297994.4	protein_coding	4/8		INFO_REALIGN_3_PRIME	chr9	TogoVar
TRMT12_chr8_124445820_124458026	124455068	A A	ATATATAT others(27): Show ATATATATATTCATATATAATATATATTCATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00621.hp1 HG00733.hp1 HG00738.hp1 others(23): Show HG00621.hp1 HG00733.hp1 HG00738.hp1 HG00738.hp2 HG01069.hp1 HG01074.hp1 HG01106.hp1 HG01123.hp1 HG01192.hp1 HG01256.hp2 HG01257.hp1 HG01258.hp1 HG01261.hp1 HG01496.hp1 HG01516.hp1 HG01517.hp2 HG01934.hp2 HG02074.hp1 HG02080.hp2 HG02155.hp1 HG02647.hp2 HG03491.hp1 HG04184.hp1 NA18965.hp1 NA19080.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0004 a0001c0003t0004	a0001c0003t0004g0000 a0001c0003t0004g0000	26	406	0.0640	34	c.27 others(45): Show c.2794_*2795insTATATATATTCATATATAATATATATTCATATAT	TRMT12	ENSG00000183665.5	transcript	ENST00000328599.4	protein_coding		2043		chr8	TogoVar
TRMT1_chr19_13099907_13121740	13109085	G G	GGTGTGTG others(27): Show GGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02258.hp1	a0005 a0005	a0005c0008 a0005c0008	a0005c0008t0001 a0005c0008t0001	a0005c0008t0001g0070 a0005c0008t0001g0070	1	374	0.0027	34	c.139 others(51): Show c.1397+295_1397+296insACACACACACACACACACACACACACAC ACACAC	TRMT1	ENSG00000104907.13	transcript	ENST00000357720.9	protein_coding	12/16			chr19	TogoVar
TRMT9B_chr8_12940673_13034777	13016235	T T	TTATATAT others(27): Show TTATATATAAAATATAAATGTGAAATATATATTTA	intron_variant intron_variant	MODIFIER	NA19062.hp1 NA19083.hp2 NA19062.hp1 NA19083.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0127 a0001c0001t0128 a0001c0001t0127 a0001c0001t0128	a0001c0001t0127g0330 a0001c0001t0128g0332 a0001c0001t0127g0330 a0001c0001t0128g0332	2	384	0.0052	34	c.328 others(51): Show c.328+3389_328+3422dupATATAAATGTGAAATATATATTTATATA TATAAA	TRMT9B	ENSG00000250305.9	transcript	ENST00000524591.7	protein_coding	4/4		INFO_REALIGN_3_PRIME	chr8	TogoVar
TRPA1_chr8_72016250_72080584	72018205	G G	GTGTATAT others(27): Show GTGTATATATATATATATATATATATATATATATA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01884.hp2 HG02559.hp1 HG02622.hp1 others(3): Show HG01884.hp2 HG02559.hp1 HG02622.hp1 HG02809.hp2 HG02886.hp1 HG02970.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0004c0003 a0001c0001 a0004c0003	a0001c0001t0005 a0004c0003t0005 a0004c0003t0006 others(1): Show a0001c0001t0005 a0004c0003t0005 a0004c0003t0006 a0004c0003t0010	a0001c0001t0005g0070 a0004c0003t0005g0001 a0004c0003t0005g0222 others(3): Show a0001c0001t0005g0070 a0004c0003t0005g0001 a0004c0003t0005g0222 a0004c0003t0006g0214 a0004c0003t0006g0223 a0004c0003t0010g0219	6	402	0.0149	34	c.47 others(45): Show c.4700_*4701insTATATATATATATATATATATATATATATATACA	TRPA1	ENSG00000104321.11	transcript	ENST00000262209.5	protein_coding		3044		chr8	TogoVar
TRPA1_chr8_72016250_72080584	72018205	G G	GTGTGTAT others(27): Show GTGTGTATATATATATATATATATATATATATATA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01978.hp1 HG02258.hp2 HG03139.hp1 HG01978.hp1 HG02258.hp2 HG03139.hp1	a0003 a0004 a0003 a0004	a0003c0008 a0004c0003 a0003c0008 a0004c0003	a0003c0008t0006 a0004c0003t0006 a0003c0008t0006 a0004c0003t0006	a0003c0008t0006g0288 a0004c0003t0006g0224 a0004c0003t0006g0227 a0003c0008t0006g0288 a0004c0003t0006g0224 a0004c0003t0006g0227	3	402	0.0075	34	c.47 others(45): Show c.4700_*4701insTATATATATATATATATATATATATATATACACA	TRPA1	ENSG00000104321.11	transcript	ENST00000262209.5	protein_coding		3044		chr8	TogoVar
TRPA1_chr8_72016250_72080584	72018205	G G	GTGTGTGT others(27): Show GTGTGTGTATATATATATATATATATATATATATA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01167.hp2 HG01169.hp2 HG01167.hp2 HG01169.hp2	a0001 a0001	a0001c0009 a0001c0009	a0001c0009t0009 a0001c0009t0009	a0001c0009t0009g0018 a0001c0009t0009g0018	2	402	0.0050	34	c.47 others(45): Show c.4700_*4701insTATATATATATATATATATATATATATACACACA	TRPA1	ENSG00000104321.11	transcript	ENST00000262209.5	protein_coding		3044		chr8	TogoVar
TRPA1_chr8_72016250_72080584	72052995	G G	GTGTGTGT others(27): Show GTGTGTGTGTGTGTGTGTGTGTGATAGATAGAGAA	intron_variant intron_variant	MODIFIER	HG02896.hp1 HG02896.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0027 a0001c0001t0027	a0001c0001t0027g0109 a0001c0001t0027g0109	1	402	0.0025	34	c.164 others(51): Show c.1645-231_1645-230insTTCTCTATCTATCACACACACACACACA CACACA	TRPA1	ENSG00000104321.11	transcript	ENST00000262209.5	protein_coding	13/26			chr8	TogoVar
TRPA1_chr8_72016250_72080584	72052995	G G	GTGTGTGT others(27): Show GTGTGTGTGTGTGTGTGTGTGTGTGTGTGATAGAT	intron_variant intron_variant	MODIFIER	HG02895.hp2 HG02922.hp1 HG02895.hp2 HG02922.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0019 a0001c0001t0019	a0001c0001t0019g0108 a0001c0001t0019g0134 a0001c0001t0019g0108 a0001c0001t0019g0134	2	402	0.0050	34	c.164 others(51): Show c.1645-231_1645-230insATCTATCACACACACACACACACACACA CACACA	TRPA1	ENSG00000104321.11	transcript	ENST00000262209.5	protein_coding	13/26			chr8	TogoVar
TRPC1_chr3_142719034_142812888	142763983	T T	TATATATA others(27): Show TATATATATATATATATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	HG02615.hp2 HG02615.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0133 a0001c0001t0002g0133	1	340	0.0029	34	c.633 others(53): Show c.633-13648_633-13647insTATATATATATATATATATATATATA TATATACA	TRPC1	ENSG00000144935.17	transcript	ENST00000476941.6	protein_coding	4/12		INFO_REALIGN_3_PRIME	chr3	TogoVar
TRPC4AP_chr20_34997404_35097807	35086525	A A	ATGTGTGT others(27): Show ATGTGTGTGTATATATATATGTGTATATATATATG	intron_variant intron_variant	MODIFIER	HG01928.hp1 HG02015.hp1 NA18941.hp2 others(1): Show HG01928.hp1 HG02015.hp1 NA18941.hp2 NA19086.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0126 a0001c0001t0002g0153 a0001c0001t0002g0154 others(1): Show a0001c0001t0002g0126 a0001c0001t0002g0153 a0001c0001t0002g0154 a0001c0001t0002g0155	4	334	0.0120	34	c.168 others(51): Show c.168+6088_168+6089insCATATATATATACACATATATATATACA CACACA	TRPC4AP	ENSG00000100991.12	transcript	ENST00000252015.3	protein_coding	1/18			chr20	TogoVar

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