Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
YWHAZ_chr8_100911523_100957020	100918408	T T	TTATATAT others(27): Show TTATATATATATATATATATATATATATATATATA	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02559.hp2 HG02559.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0139 a0001c0001t0139	a0001c0001t0139g0227 a0001c0001t0139g0227	1	392	0.0026	34	c.22 others(45): Show c.2251_*2284dupTATATATATATATATATATATATATATATATATA	YWHAZ	ENSG00000164924.18	transcript	ENST00000395958.6	protein_coding	6/6	2284		chr8	TogoVar
YY2_chrX_21850987_21863740	21862933	C C	CATATATA others(27): Show CATATATATATAAACATATATATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03540.hp1 HG03540.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0000 a0001c0001t0004g0000	1	324	0.0031	34	c.53 others(45): Show c.5330_*5331insATATATATATAAACATATATATATATATATATAT	YY2	ENSG00000230797.3	transcript	ENST00000429584.3	protein_coding		4194		chrX	TogoVar
YY2_chrX_21850987_21863740	21862933	C C	CATATATA others(27): Show CATATATATATATATATATATATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18966.hp1 NA18966.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0000 a0001c0001t0006g0000	1	324	0.0031	34	c.53 others(45): Show c.5330_*5331insATATATATATATATATATATATATATATATATAT	YY2	ENSG00000230797.3	transcript	ENST00000429584.3	protein_coding		4194		chrX	TogoVar
ZAN_chr7_100728595_100802797	100733699	C C	CCCCTGAT others(27): Show CCCCTGATAGTCTGAAGTCCAGTGCTTCCATGGGT	intron_variant intron_variant	MODIFIER	HG01433.hp2 HG01433.hp2	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0001 a0001c0006t0001	a0001c0006t0001g0051 a0001c0006t0001g0051	1	308	0.0033	34	c.-14 others(49): Show c.-143+53_-143+86dupCCTGATAGTCTGAAGTCCAGTGCTTCCATG GGTC	ZAN	ENSG00000146839.19	transcript	ENST00000613979.5	protein_coding	1/47		INFO_REALIGN_3_PRIME	chr7	TogoVar
ZAN_chr7_100728595_100802797	100792982	C C	CAAAAAAA others(27): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00597.hp2 HG01496.hp2 HG00408.hp1 HG00597.hp2 HG01496.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0113 a0003c0003t0001g0114 a0003c0003t0001g0253 a0003c0003t0001g0113 a0003c0003t0001g0114 a0003c0003t0001g0253	3	308	0.0097	34	c.778 others(51): Show c.7787+518_7787+519insAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAA	ZAN	ENSG00000146839.19	transcript	ENST00000613979.5	protein_coding	42/47		INFO_REALIGN_3_PRIME	chr7	TogoVar
ZBBX_chr3_167234843_167385297	167330865	G G	GAGAGAGA others(27): Show GAGAGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00140.hp2	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0001 a0002c0001t0001	a0002c0001t0001g0285 a0002c0001t0001g0285	1	290	0.0035	34	c.688 others(51): Show c.688-2750_688-2749insTCTTCTTCTTCTTCTTCTTCTTCTTCTT CTCTCT	ZBBX	ENSG00000169064.13	transcript	ENST00000675490.1	protein_coding	10/21			chr3	TogoVar
ZBBX_chr3_167234843_167385297	167330945	T T	TTCTCTCT others(27): Show TTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	intron_variant intron_variant	MODIFIER	HG00558.hp1 NA18747.hp2 NA19076.hp2 HG00558.hp1 NA18747.hp2 NA19076.hp2	a0002 a0005 a0002 a0005	a0002c0001 a0005c0005 a0002c0001 a0005c0005	a0002c0001t0001 a0005c0005t0001 a0002c0001t0001 a0005c0005t0001	a0002c0001t0001g0183 a0002c0001t0001g0246 a0005c0005t0001g0062 a0002c0001t0001g0183 a0002c0001t0001g0246 a0005c0005t0001g0062	3	290	0.0103	34	c.688 others(51): Show c.688-2830_688-2829insGAGAGAGAGAGAGAGAGAGAGAGAGAGA GAGAGA	ZBBX	ENSG00000169064.13	transcript	ENST00000675490.1	protein_coding	10/21			chr3	TogoVar
ZBBX_chr3_167234843_167385297	167330945	T T	TTCTCTCT others(27): Show TTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTC	intron_variant intron_variant	MODIFIER	HG01255.hp1 HG03654.hp1 HG01255.hp1 HG03654.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0104 a0003c0003t0001g0105 a0003c0003t0001g0104 a0003c0003t0001g0105	2	290	0.0069	34	c.688 others(51): Show c.688-2830_688-2829insGAGAGAGAGAGAGAGAGAAAGAGAGAGA GAGAGA	ZBBX	ENSG00000169064.13	transcript	ENST00000675490.1	protein_coding	10/21			chr3	TogoVar
ZBED1_chrX_2481435_2505976	2485789	A A	AGAAGGGA others(27): Show AGAAGGGAGAGAAGGAAGGAAGGGAGAGAAGGAAG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01993.hp2 HG02451.hp2 HG01993.hp2 HG02451.hp2	a0001 a0001	a0001c0004 a0001c0014 a0001c0004 a0001c0014	a0001c0004t0025 a0001c0014t0003 a0001c0004t0025 a0001c0014t0003	a0001c0004t0025g0114 a0001c0014t0003g0109 a0001c0004t0025g0114 a0001c0014t0003g0109	2	221	0.0091	34	c.28 others(45): Show c.2812_*2845dupCTTCCTTCTCTCCCTTCCTTCCTTCTCTCCCTTC	ZBED1	ENSG00000214717.12	transcript	ENST00000652001.1	protein_coding		645		chrX	TogoVar
ZBED6_chr1_203790623_203859124	203804361	A A	ACAGGATG others(27): Show ACAGGATGGTCTCCATCTCCTGACCTCGTGATCCG	intron_variant intron_variant	MODIFIER	HG02257.hp1 HG02257.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0018 a0001c0001t0003g0018	1	384	0.0026	34	c.25 others(55): Show c.2554+1347_*2554+1380dupAGGATGGTCTCCATCTCCTGACCT CGTGATCCGC	ZBED6	ENSG00000257315.4	transcript	ENST00000550078.3	protein_coding	1/16		INFO_REALIGN_3_PRIME	chr1	TogoVar
ZBTB16_chr11_114054711_114261765	114075629	G G	GTATATAT others(27): Show GTATATATATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG03098.hp2 HG03516.hp2 HG06807.hp1 HG03098.hp2 HG03516.hp2 HG06807.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0087 a0001c0001t0099 a0001c0001t0002 a0001c0001t0087 a0001c0001t0099	a0001c0001t0002g0269 a0001c0001t0087g0268 a0001c0001t0099g0125 a0001c0001t0002g0269 a0001c0001t0087g0268 a0001c0001t0099g0125	3	278	0.0108	34	c.126 others(55): Show c.1268+11080_1268+11081insATATATATATATATATATATATAT ATATATATAT	ZBTB16	ENSG00000109906.15	transcript	ENST00000335953.9	protein_coding	2/6		INFO_REALIGN_3_PRIME	chr11	TogoVar
ZBTB16_chr11_114054711_114261765	114148429	C C	CTGTCTGT others(27): Show CTGTCTGTCTCTCTCTCTCTCTCTCTCTCTTTCTT	intron_variant intron_variant	MODIFIER	NA19082.hp2 NA19082.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0232 a0001c0001t0010g0232	1	278	0.0036	34	c.126 others(53): Show c.1269-7907_1269-7906insGTCTGTCTCTCTCTCTCTCTCTCTCT CTTTCTTT	ZBTB16	ENSG00000109906.15	transcript	ENST00000335953.9	protein_coding	2/6		INFO_REALIGN_3_PRIME	chr11	TogoVar
ZBTB16_chr11_114054711_114261765	114148469	C C	CTCTCTCT others(27): Show CTCTCTCTCTCTCTTTCTTTCTTTCTTTCTTTCTT	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00558.hp2 HG02523.hp2 others(1): Show HG00140.hp2 HG00558.hp2 HG02523.hp2 HG02683.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0007 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0007 a0001c0001t0038	a0001c0001t0001g0181 a0001c0001t0002g0082 a0001c0001t0007g0199 others(1): Show a0001c0001t0001g0181 a0001c0001t0002g0082 a0001c0001t0007g0199 a0001c0001t0038g0087	4	278	0.0144	34	c.126 others(53): Show c.1269-7865_1269-7864insCTCTCTCTCTTTCTTTCTTTCTTTCT TTCTTTCT	ZBTB16	ENSG00000109906.15	transcript	ENST00000335953.9	protein_coding	2/6		INFO_REALIGN_3_PRIME	chr11	TogoVar
ZBTB16_chr11_114054711_114261765	114148469	C C	CTTTCTTT others(27): Show CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	intron_variant intron_variant	MODIFIER	HG02074.hp2 NA18952.hp1 HG02074.hp2 NA18952.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0002 a0001c0001t0003	a0001c0001t0002g0091 a0001c0001t0003g0094 a0001c0001t0002g0091 a0001c0001t0003g0094	2	278	0.0072	34	c.126 others(53): Show c.1269-7867_1269-7866insTTCTTTCTTTCTTTCTTTCTTTCTTT CTTTCTTT	ZBTB16	ENSG00000109906.15	transcript	ENST00000335953.9	protein_coding	2/6		INFO_REALIGN_3_PRIME	chr11	TogoVar
ZBTB17_chr1_15936869_15981101	15978133	A A	ATTTATTT others(27): Show ATTTATTTTTTTATTTTTCTTTTTTATTTCTTCTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02015.hp2 HG02015.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0178 a0001c0001t0001g0178	1	320	0.0031	34	c.-22 others(45): Show c.-2241_-2240insAAGAAGAAATAAAAAAGAAAAATAAAAAAATAAA	ZBTB17	ENSG00000116809.12	transcript	ENST00000375743.9	protein_coding		2033		chr1	TogoVar
ZBTB1_chr14_64499770_64529951	64518904	G G	GTATATAT others(27): Show GTATATATATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02683.hp2 HG02683.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0102 a0001c0001t0001g0102	1	370	0.0027	34	c.-18 others(51): Show c.-18-2551_-18-2550insTATATATATATATATATATATATATATA TATATA	ZBTB1	ENSG00000126804.14	transcript	ENST00000683701.1	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr14	TogoVar
ZBTB22_chr6_33309418_33322744	33318755	T T	TCTCTCAA others(27): Show TCTCTCAACAACAACAACGGAGGAGGAGGAAAAGA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19085.hp1 NA19085.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0011 a0001c0001t0001g0011	1	393	0.0025	34	c.-11 others(45): Show c.-1173_-1172insTCTTTTCCTCCTCCTCCGTTGTTGTTGTTGAGAG	ZBTB22	ENSG00000236104.3	transcript	ENST00000431845.3	protein_coding		1012		chr6	TogoVar
ZBTB38_chr3_141363504_141454792	141431341	A A	AAAATATA others(27): Show AAAATATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03041.hp1 HG03041.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0230 a0001c0001t0004g0230	1	270	0.0037	34	c.1-1 others(49): Show c.1-11047_1-11046insAATATATATATATATATATATATATATATA TATA	ZBTB38	ENSG00000177311.12	transcript	ENST00000321464.7	protein_coding	5/5		INFO_REALIGN_3_PRIME	chr3	TogoVar
ZBTB41_chr1_197148682_197206293	197164774	A A	AATATATT others(27): Show AATATATTATATATAATACATATATAATATATTAT	intron_variant intron_variant	MODIFIER	HG02257.hp1 HG02257.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0222 a0001c0001t0004g0222	1	328	0.0031	34	c.207 others(53): Show c.2075-4794_2075-4761dupATAATATATTATATATGTATTATATA TAATATAT	ZBTB41	ENSG00000177888.8	transcript	ENST00000367405.5	protein_coding	10/10			chr1	TogoVar
ZBTB41_chr1_197148682_197206293	197175431	A A	AATATATA others(27): Show AATATATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18951.hp2 NA18967.hp2 NA19083.hp1 others(2): Show NA18951.hp2 NA18967.hp2 NA19083.hp1 NA19085.hp1 NA19085.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0001t0003 a0001c0002t0001 others(1): Show a0001c0001t0002 a0001c0001t0003 a0001c0002t0001 a0001c0002t0014	a0001c0001t0002g0059 a0001c0001t0003g0097 a0001c0001t0003g0128 others(2): Show a0001c0001t0002g0059 a0001c0001t0003g0097 a0001c0001t0003g0128 a0001c0002t0001g0145 a0001c0002t0014g0167	5	328	0.0152	34	c.188 others(51): Show c.1880-317_1880-316insATATATATATATATATATATATATATAT ATATAT	ZBTB41	ENSG00000177888.8	transcript	ENST00000367405.5	protein_coding	8/10			chr1	TogoVar
ZBTB46_chr20_63738670_63836264	63798674	C C	CAAAAAAA others(27): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA18967.hp2 NA18967.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0003 a0002c0003t0003	a0002c0003t0003g0243 a0002c0003t0003g0243	1	316	0.0032	34	c.-33 others(51): Show c.-33-7885_-33-7884insTTTTTTTTTTTTTTTTTTTTTTTTTTTT TTTTTT	ZBTB46	ENSG00000130584.12	transcript	ENST00000245663.9	protein_coding	1/4			chr20	TogoVar
ZBTB46_chr20_63738670_63836264	63808066	G G	GGGACACT others(27): Show GGGACACTCACGGAAGCTGAACGGACCTTCCCACA	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00423.hp1 HG00438.hp1 others(67): Show HG00140.hp1 HG00423.hp1 HG00438.hp1 HG00609.hp1 HG00621.hp1 HG00639.hp1 HG00673.hp1 HG01261.hp2 HG01433.hp2 HG01891.hp2 HG01952.hp1 HG01981.hp1 HG02027.hp1 HG02056.hp1 HG02080.hp1 HG02080.hp2 HG02083.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02273.hp2 HG02300.hp1 HG02630.hp2 HG02809.hp2 HG02818.hp1 HG02895.hp1 HG02895.hp2 HG02897.hp2 HG02976.hp1 HG03017.hp2 HG03041.hp2 HG03195.hp1 HG03209.hp1 HG03491.hp2 HG03654.hp1 HG03669.hp1 HG03688.hp1 HG03942.hp2 HG04184.hp2 HG04228.hp1 HG06807.hp1 NA18747.hp1 NA18906.hp1 NA18944.hp2 NA18945.hp1 NA18952.hp2 NA18954.hp1 NA18962.hp2 NA18967.hp2 NA18973.hp1 NA18977.hp2 NA18979.hp2 NA18982.hp1 NA18984.hp2 NA18990.hp1 NA18993.hp1 NA18999.hp2 NA19005.hp1 NA19007.hp1 NA19010.hp1 NA19056.hp2 NA19065.hp2 NA19067.hp1 NA19068.hp1 NA19084.hp2 NA19087.hp1 NA19090.hp2 NA19240.hp1 NA20805.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0002c0006 others(3): Show a0001c0001 a0002c0003 a0002c0006 a0002c0022 a0002c0023 a0002c0024	a0001c0001t0011 a0002c0003t0003 a0002c0003t0007 others(13): Show a0001c0001t0011 a0002c0003t0003 a0002c0003t0007 a0002c0003t0009 a0002c0003t0011 a0002c0003t0013 a0002c0003t0018 a0002c0003t0039 a0002c0003t0042 a0002c0003t0043 a0002c0006t0007 a0002c0006t0010 a0002c0006t0041 a0002c0022t0003 a0002c0023t0010 a0002c0024t0013	a0001c0001t0011g0309 a0002c0003t0003g0234 a0002c0003t0003g0235 others(67): Show a0001c0001t0011g0309 a0002c0003t0003g0234 a0002c0003t0003g0235 a0002c0003t0003g0236 a0002c0003t0003g0237 a0002c0003t0003g0238 a0002c0003t0003g0239 a0002c0003t0003g0240 a0002c0003t0003g0241 a0002c0003t0003g0243 a0002c0003t0003g0244 a0002c0003t0003g0250 a0002c0003t0003g0252 a0002c0003t0003g0253 a0002c0003t0003g0255 a0002c0003t0003g0256 a0002c0003t0003g0259 a0002c0003t0003g0260 a0002c0003t0003g0262 a0002c0003t0003g0263 a0002c0003t0003g0265 a0002c0003t0003g0270 a0002c0003t0003g0272 a0002c0003t0003g0273 a0002c0003t0003g0274 a0002c0003t0003g0275 a0002c0003t0003g0276 a0002c0003t0003g0278 a0002c0003t0003g0279 a0002c0003t0003g0281 a0002c0003t0003g0282 a0002c0003t0003g0286 a0002c0003t0003g0287 a0002c0003t0003g0288 a0002c0003t0003g0307 a0002c0003t0007g0242 a0002c0003t0007g0246 a0002c0003t0007g0247 a0002c0003t0007g0248 a0002c0003t0007g0249 a0002c0003t0007g0261 a0002c0003t0007g0271 a0002c0003t0007g0277 a0002c0003t0007g0280 a0002c0003t0009g0285 a0002c0003t0009g0301 a0002c0003t0009g0302 a0002c0003t0009g0303 a0002c0003t0011g0294 a0002c0003t0011g0295 a0002c0003t0011g0315 a0002c0003t0011g0316 a0002c0003t0013g0300 a0002c0003t0013g0312 a0002c0003t0013g0313 a0002c0003t0013g0314 a0002c0003t0018g0245 a0002c0003t0018g0305 a0002c0003t0018g0306 a0002c0003t0039g0293 a0002c0003t0042g0254 a0002c0003t0043g0251 a0002c0006t0007g0266 a0002c0006t0007g0269 a0002c0006t0010g0258 a0002c0006t0010g0268 a0002c0006t0041g0304 a0002c0022t0003g0267 a0002c0023t0010g0296 a0002c0024t0013g0308	70	316	0.2215	34	c.-33 others(53): Show c.-33-17277_-33-17276insTGTGGGAAGGTCCGTTCAGCTTCCGT GAGTGTCC	ZBTB46	ENSG00000130584.12	transcript	ENST00000245663.9	protein_coding	1/4			chr20	TogoVar
ZBTB7C_chr18_48021672_48414383	48245090	G G	GTATATAT others(27): Show GTATATATATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02602.hp1 HG04184.hp1 HG02602.hp1 HG04184.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0024 a0001c0003t0006 a0001c0001t0024 a0001c0003t0006	a0001c0001t0024g0126 a0001c0003t0006g0105 a0001c0001t0024g0126 a0001c0003t0006g0105	2	174	0.0115	34	c.-78 others(53): Show c.-78-59096_-78-59095insTATATATATATATATATATATATATA TATATATA	ZBTB7C	ENSG00000184828.10	transcript	ENST00000590800.6	protein_coding	2/4			chr18	TogoVar
ZC2HC1B_chr6_143859474_143943343	143882334	T T	TTATATAT others(27): Show TTATATATATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02895.hp2 HG02897.hp1 HG02895.hp2 HG02897.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0016 a0002c0002t0001g0017 a0002c0002t0001g0016 a0002c0002t0001g0017	2	330	0.0061	34	c.29- others(49): Show c.29-1968_29-1935dupATATATATATATATATATATATATATATAT ATAT	ZC2HC1B	ENSG00000118491.10	transcript	ENST00000237275.9	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr6	TogoVar
ZC3H11A_chr1_203790623_203859124	203804361	A A	ACAGGATG others(27): Show ACAGGATGGTCTCCATCTCCTGACCTCGTGATCCG	intron_variant intron_variant	MODIFIER	HG02257.hp1 HG02257.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0083 a0001c0001t0002g0083	1	384	0.0026	34	c.-14 others(53): Show c.-146+1347_-146+1380dupAGGATGGTCTCCATCTCCTGACCTCG TGATCCGC	ZC3H11A	ENSG00000058673.17	transcript	ENST00000367210.3	protein_coding	2/17		INFO_REALIGN_3_PRIME	chr1	TogoVar
ZC3H11B_chr1_219603012_219618105	219607738	C C	CTTTTTTT others(27): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00597.hp2 HG00642.hp1 HG01106.hp1 others(10): Show HG00597.hp2 HG00642.hp1 HG01106.hp1 HG01169.hp1 HG01169.hp2 HG01258.hp2 HG01496.hp1 HG02004.hp1 HG03490.hp2 HG03491.hp2 HG03492.hp1 NA19003.hp1 NA19004.hp2	a0001 a0017 a0001 a0017	a0001c0001 a0017c0021 a0001c0001 a0017c0021	a0001c0001t0002 a0017c0021t0002 a0001c0001t0002 a0017c0021t0002	a0001c0001t0002g0002 a0017c0021t0002g0020 a0001c0001t0002g0002 a0017c0021t0002g0020	13	448	0.0290	34	c.19 others(45): Show c.1906_*1907insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	ZC3H11B	ENSG00000215817.9	transcript	ENST00000651890.2	protein_coding		273		chr1	TogoVar
ZC3H11C_chr6_65296476_65311574	65306832	C C	CAAAAAAA others(27): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18953.hp1 NA18953.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0001 a0002c0002t0002g0001	1	442	0.0023	34	c.18 others(45): Show c.1893_*1894insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	ZC3H11C	ENSG00000214558.5	transcript	ENST00000398578.3	protein_coding		259		chr6	TogoVar
ZC3H12B_chrX_65029826_65512887	65448955	A A	AAAAGAAA others(27): Show AAAAGAAAGAAAGAAAGAAAGAAAAAGAAAGAAAG	intron_variant intron_variant	MODIFIER	HG01192.hp1 HG02015.hp1 HG02074.hp1 others(5): Show HG01192.hp1 HG02015.hp1 HG02074.hp1 HG02083.hp1 NA19079.hp1 NA19085.hp1 NA20300.hp2 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0059 a0001c0001t0001g0068 a0001c0001t0001g0075 others(5): Show a0001c0001t0001g0059 a0001c0001t0001g0068 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0099 a0001c0001t0001g0100 a0001c0001t0001g0107	8	165	0.0485	34	c.-15 others(55): Show c.-156-39668_-156-39667insAAGAAAGAAAGAAAGAAAGAAAGA AAGAAAGAAA	ZC3H12B	ENSG00000102053.13	transcript	ENST00000338957.5	protein_coding	5/9		INFO_REALIGN_3_PRIME	chrX	TogoVar
ZC3H12B_chrX_65029826_65512887	65448983	A A	AAGAAAGA others(27): Show AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	intron_variant intron_variant	MODIFIER	HG01081.hp1 HG02145.hp1 HG02257.hp1 others(10): Show HG01081.hp1 HG02145.hp1 HG02257.hp1 HG02280.hp2 HG02717.hp1 HG02922.hp2 HG02970.hp2 HG03209.hp1 HG03486.hp2 HG03516.hp2 HG03540.hp2 HG03579.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 others(3): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0012 a0001c0002t0002	a0001c0001t0002g0148 a0001c0001t0002g0149 a0001c0001t0002g0151 others(10): Show a0001c0001t0002g0148 a0001c0001t0002g0149 a0001c0001t0002g0151 a0001c0001t0002g0152 a0001c0001t0002g0153 a0001c0001t0003g0026 a0001c0001t0003g0028 a0001c0001t0003g0125 a0001c0001t0004g0006 a0001c0001t0005g0143 a0001c0001t0012g0150 a0001c0002t0002g0154 a0001c0002t0002g0155	13	165	0.0788	34	c.-15 others(55): Show c.-156-39652_-156-39651insAAGAAAGAAAGAAAGAAAGAAAGA GAAAGAAAGA	ZC3H12B	ENSG00000102053.13	transcript	ENST00000338957.5	protein_coding	5/9		INFO_REALIGN_3_PRIME	chrX	TogoVar
ZC3H13_chr13_45949465_46057746	45983400	C C	CATATATA others(27): Show CATATATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02895.hp1 HG02897.hp1 HG02895.hp1 HG02897.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0146 a0001c0001t0008g0147 a0001c0001t0008g0146 a0001c0001t0008g0147	2	324	0.0062	34	c.172 others(53): Show c.1720+1896_1720+1897insATATATATATATATATATATATATAT ATATATAT	ZC3H13	ENSG00000123200.17	transcript	ENST00000679008.1	protein_coding	10/18			chr13	TogoVar
ZC3H13_chr13_45949465_46057746	45983401	T T	TTATATAT others(27): Show TTATATATATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	NA19007.hp2 NA19007.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0200 a0001c0001t0001g0200	1	324	0.0031	34	c.172 others(53): Show c.1720+1895_1720+1896insTATATATATATATATATATATATATA TATATATA	ZC3H13	ENSG00000123200.17	transcript	ENST00000679008.1	protein_coding	10/18			chr13	TogoVar
ZC3H13_chr13_45949465_46057746	45983413	A A	ATATATAT others(27): Show ATATATATATATATATATATATATATATATATATT	intron_variant intron_variant	MODIFIER	HG01192.hp1 NA19072.hp2 HG01192.hp1 NA19072.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0001 a0001c0001t0004	a0001c0001t0001g0194 a0001c0001t0004g0154 a0001c0001t0001g0194 a0001c0001t0004g0154	2	324	0.0062	34	c.172 others(53): Show c.1720+1883_1720+1884insAATATATATATATATATATATATATA TATATATA	ZC3H13	ENSG00000123200.17	transcript	ENST00000679008.1	protein_coding	10/18			chr13	TogoVar
ZC3H13_chr13_45949465_46057746	45983413	A A	ATATATAT others(27): Show ATATATATATATATATATATATATATATATATTTT	intron_variant intron_variant	MODIFIER	HG03225.hp2 HG03225.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0009	a0001c0001t0009g0302 a0001c0001t0009g0302	1	324	0.0031	34	c.172 others(53): Show c.1720+1883_1720+1884insAAAATATATATATATATATATATATA TATATATA	ZC3H13	ENSG00000123200.17	transcript	ENST00000679008.1	protein_coding	10/18			chr13	TogoVar
ZC3H13_chr13_45949465_46057746	45983413	A A	ATATATAT others(27): Show ATATATATATATATATATATATATATATATTTTTT	intron_variant intron_variant	MODIFIER	HG01952.hp1 NA18944.hp2 HG01952.hp1 NA18944.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0173 a0001c0001t0001g0175 a0001c0001t0001g0173 a0001c0001t0001g0175	2	324	0.0062	34	c.172 others(53): Show c.1720+1883_1720+1884insAAAAAATATATATATATATATATATA TATATATA	ZC3H13	ENSG00000123200.17	transcript	ENST00000679008.1	protein_coding	10/18			chr13	TogoVar
ZC3H13_chr13_45949465_46057746	45983413	A A	ATATATAT others(27): Show ATATATATATATATATATATATATATATTTTTTTT	intron_variant intron_variant	MODIFIER	NA19012.hp2 NA19012.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0235 a0001c0001t0001g0235	1	324	0.0031	34	c.172 others(53): Show c.1720+1883_1720+1884insAAAAAAAATATATATATATATATATA TATATATA	ZC3H13	ENSG00000123200.17	transcript	ENST00000679008.1	protein_coding	10/18			chr13	TogoVar
ZC3H13_chr13_45949465_46057746	46006713	C C	CATATATA others(27): Show CATATATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00597.hp1 HG00735.hp2 others(17): Show HG00408.hp1 HG00597.hp1 HG00735.hp2 HG01358.hp1 HG02572.hp2 HG02809.hp1 HG02922.hp2 HG03471.hp2 HG03834.hp1 NA18944.hp2 NA18966.hp2 NA18978.hp1 NA18984.hp2 NA18993.hp1 NA18999.hp1 NA19009.hp2 NA19060.hp2 NA19074.hp2 NA19083.hp1 NA20752.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 a0001c0001t0015	a0001c0001t0001g0173 a0001c0001t0001g0199 a0001c0001t0001g0204 others(17): Show a0001c0001t0001g0173 a0001c0001t0001g0199 a0001c0001t0001g0204 a0001c0001t0001g0216 a0001c0001t0001g0220 a0001c0001t0001g0249 a0001c0001t0001g0263 a0001c0001t0001g0271 a0001c0001t0001g0277 a0001c0001t0001g0280 a0001c0001t0001g0282 a0001c0001t0001g0283 a0001c0001t0001g0287 a0001c0001t0001g0300 a0001c0001t0001g0303 a0001c0001t0002g0085 a0001c0001t0004g0151 a0001c0001t0004g0153 a0001c0001t0005g0252 a0001c0001t0015g0244	20	324	0.0617	34	c.747 others(51): Show c.747-3378_747-3377insATATATATATATATATATATATATATAT ATATAT	ZC3H13	ENSG00000123200.17	transcript	ENST00000679008.1	protein_coding	7/18			chr13	TogoVar
ZC3H13_chr13_45949465_46057746	46006725	T T	TATATATA others(27): Show TATATATATATATATATATATATATATATATATGA	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG00642.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0296 a0001c0001t0001g0296	1	324	0.0031	34	c.747 others(51): Show c.747-3390_747-3389insTCATATATATATATATATATATATATAT ATATAT	ZC3H13	ENSG00000123200.17	transcript	ENST00000679008.1	protein_coding	7/18			chr13	TogoVar
ZC3H13_chr13_45949465_46057746	46051014	G G	GATAAATT others(27): Show GATAAATTTAAGGGAGGAAGGGGGGGGGGGGGAGA	intron_variant intron_variant	MODIFIER	HG03491.hp1 HG03491.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0089 a0001c0001t0002g0089	1	324	0.0031	34	c.-10 others(51): Show c.-10+1389_-10+1390insTCTCCCCCCCCCCCCCTTCCTCCCTTAA ATTTAT	ZC3H13	ENSG00000123200.17	transcript	ENST00000679008.1	protein_coding	1/18			chr13	TogoVar
ZC3H7A_chr16_11745597_11802258	11769784	C C	CTTTTTTT others(27): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01123.hp1 HG01123.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0350 a0002c0003t0001g0350	1	390	0.0026	34	c.110 others(51): Show c.1109-690_1109-689insAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAA	ZC3H7A	ENSG00000122299.12	transcript	ENST00000355758.9	protein_coding	10/22			chr16	TogoVar
ZC3HAV1_chr7_139038515_139114720	139097428	A A	ATATATAT others(27): Show ATATATATATATATATATATATATATATTTTTTTT	intron_variant intron_variant	MODIFIER	NA19090.hp1 NA19090.hp1	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0006 a0002c0001t0006	a0002c0001t0006g0013 a0002c0001t0006g0013	1	314	0.0032	34	c.309 others(51): Show c.309-7670_309-7669insAAAAAAAATATATATATATATATATATA TATATA	ZC3HAV1	ENSG00000105939.14	transcript	ENST00000242351.10	protein_coding	1/12			chr7	TogoVar
ZC3HAV1_chr7_139038515_139114720	139112066	A A	AAAGGAAG others(27): Show AAAGGAAGGGAAAGGAAAGGAAGAGAAAGGAAAGG	upstream_gene_variant upstream_gene_variant	MODIFIER	NA20300.hp1 NA20300.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0005 a0003c0003t0005	a0003c0003t0005g0195 a0003c0003t0005g0195	1	314	0.0032	34	c.-27 others(45): Show c.-2769_-2736dupCCTTTCCTTTCTCTTCCTTTCCTTTCCCTTCCTT	ZC3HAV1	ENSG00000105939.14	transcript	ENST00000242351.10	protein_coding		2347		chr7	TogoVar
ZCCHC12_chrX_118818824_118831968	118830296	C C	CTTTTTTT others(27): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02895.hp1 HG02897.hp1 HG02895.hp1 HG02897.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0001 a0001c0001t0002g0001	2	318	0.0063	34	c.38 others(45): Show c.3843_*3844insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	ZCCHC12	ENSG00000174460.4	transcript	ENST00000310164.3	protein_coding		3329		chrX	TogoVar
ZCCHC2_chr18_62518025_62583579	62567944	C C	CAAAAAAA others(27): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03486.hp2 HG03486.hp2	a0002 a0002	a0002c0012 a0002c0012	a0002c0012t0008 a0002c0012t0008	a0002c0012t0008g0212 a0002c0012t0008g0212	1	312	0.0032	34	c.184 others(53): Show c.1847-2144_1847-2143insAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAA	ZCCHC2	ENSG00000141664.10	transcript	ENST00000269499.10	protein_coding	11/13		INFO_REALIGN_3_PRIME	chr18	TogoVar
ZDHHC13_chr11_19112168_19181415	19133942	T T	TATATATA others(27): Show TATATATATATATATATATATATATATATATACAC	intron_variant intron_variant	MODIFIER	HG01943.hp2 HG02015.hp1 HG02135.hp2 others(2): Show HG01943.hp2 HG02015.hp1 HG02135.hp2 HG02273.hp2 NA19056.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0147 others(2): Show a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0001g0161 a0001c0001t0001g0172	5	350	0.0143	34	c.28- others(49): Show c.28-9035_28-9034insTATATATATATATATATATATATATATATA CACA	ZDHHC13	ENSG00000177054.14	transcript	ENST00000446113.7	protein_coding	1/16		INFO_REALIGN_3_PRIME	chr11	TogoVar
ZDHHC14_chr6_157376190_157683157	157643650	A A	AATATATA others(27): Show AATATATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG01433.hp1 HG01433.hp2 others(3): Show HG01081.hp2 HG01433.hp1 HG01433.hp2 HG02922.hp2 NA18941.hp2 NA18971.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0017 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0017 a0001c0001t0047 a0001c0002t0002 a0001c0002t0008	a0001c0001t0001g0100 a0001c0001t0002g0104 a0001c0001t0017g0168 others(3): Show a0001c0001t0001g0100 a0001c0001t0002g0104 a0001c0001t0017g0168 a0001c0001t0047g0101 a0001c0002t0002g0077 a0001c0002t0008g0072	6	188	0.0319	34	c.753 others(51): Show c.753-2061_753-2060insATATATATATATATATATATATATATAT ATATAT	ZDHHC14	ENSG00000175048.17	transcript	ENST00000359775.10	protein_coding	5/8		INFO_REALIGN_3_PRIME	chr6	TogoVar
ZDHHC15_chrX_75363427_75528037	75373926	G G	GTTTTTTT others(27): Show GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA19030.hp1 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0022 a0001c0001t0022	a0001c0001t0022g0069 a0001c0001t0022g0069	1	237	0.0042	34	c.33 others(49): Show c.33-982_*33-981insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAA	ZDHHC15	ENSG00000102383.14	transcript	ENST00000373367.8	protein_coding	11/11			chrX	TogoVar
ZDHHC15_chrX_75363427_75528037	75421404	T T	TATATATA others(27): Show TATATATATAATATATATATAATATATATTATATA	intron_variant intron_variant	MODIFIER	NA19009.hp1 NA19009.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0156 a0001c0001t0001g0156	1	237	0.0042	34	c.863 others(49): Show c.863+459_863+460insTATATAATATATATTATATATATATTATAT ATAT	ZDHHC15	ENSG00000102383.14	transcript	ENST00000373367.8	protein_coding	9/11			chrX	TogoVar
ZDHHC2_chr8_17151482_17229799	17199545	C C	CGTCTTCG others(27): Show CGTCTTCGTCTTCGTCTTCGTCTTCGTCTTGTCTT	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02258.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0034 a0001c0001t0034	a0001c0001t0034g0161 a0001c0001t0034g0161	1	390	0.0026	34	c.476 others(51): Show c.476+1132_476+1133insGTCTTCGTCTTCGTCTTCGTCTTCGTCT TGTCTT	ZDHHC2	ENSG00000104219.13	transcript	ENST00000262096.13	protein_coding	6/12			chr8	TogoVar
ZDHHC2_chr8_17151482_17229799	17199574	G G	GTCTTCTT others(27): Show GTCTTCTTCTTTCTTCTTCTTTATTCTTTTCTTCT	intron_variant intron_variant	MODIFIER	NA19010.hp2 NA19010.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0268 a0001c0001t0003g0268	1	390	0.0026	34	c.476 others(51): Show c.476+1171_476+1172insTCTTCTTCTTTATTCTTTTCTTCTTCTT CTTCTT	ZDHHC2	ENSG00000104219.13	transcript	ENST00000262096.13	protein_coding	6/12		INFO_REALIGN_3_PRIME	chr8	TogoVar
ZDHHC5_chr11_57663114_57706182	57702425	A A	AATATATA others(27): Show AATATATATATATATATATATATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03239.hp1 HG03239.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0108 a0001c0001t0002g0108	1	324	0.0031	34	c.23 others(45): Show c.2394_*2395insATATATATATATATATATATATATATATATATAT	ZDHHC5	ENSG00000156599.11	transcript	ENST00000287169.8	protein_coding		1244		chr11	TogoVar

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