Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
ADK_chr10_74146221_74714290	74274732	G G	GTGTATAT others(27): Show GTGTATATATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	NA18975.hp2 NA18975.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0016 a0001c0001t0001g0016	1	200	0.0050	34	c.195 others(53): Show c.195-39934_195-39933insGTATATATATATATATATATATATAT ATATATAT	ADK	ENSG00000156110.15	transcript	ENST00000539909.6	protein_coding	3/10		INFO_REALIGN_3_PRIME	chr10	TogoVar
ADK_chr10_74146221_74714290	74274732	G G	GTGTGTAT others(27): Show GTGTGTATATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	NA19056.hp2 NA19056.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0009 a0001c0001t0001g0009	1	200	0.0050	34	c.195 others(53): Show c.195-39934_195-39933insGTGTATATATATATATATATATATAT ATATATAT	ADK	ENSG00000156110.15	transcript	ENST00000539909.6	protein_coding	3/10		INFO_REALIGN_3_PRIME	chr10	TogoVar
ADPRHL1_chr13_113394611_113458488	113449146	T T	TTCAGAGA others(27): Show TTCAGAGAGGCTCACCCGGAAGGAGGCAGCCCCAG	intron_variant intron_variant	MODIFIER	HG02040.hp1 HG02040.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0060 a0001c0001t0060	a0001c0001t0060g0222 a0001c0001t0060g0222	1	262	0.0038	34	c.214 others(51): Show c.214+4044_214+4077dupCTGGGGCTGCCTCCTTCCGGGTGAGCCT CTCTGA	ADPRHL1	ENSG00000153531.15	transcript	ENST00000612156.3	protein_coding	1/7			chr13	TogoVar
ADPRH_chr3_119574492_119594945	119594241	T T	TCATTGCG others(27): Show TCATTGCGCTCCAGCTTGGGCGACAAGAGTGAAAC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01258.hp2 HG01258.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0002 a0001c0002t0002g0002	1	454	0.0022	34	c.63 others(45): Show c.6363_*6364insCATTGCGCTCCAGCTTGGGCGACAAGAGTGAAAC	ADPRH	ENSG00000144843.12	transcript	ENST00000357003.8	protein_coding		4297		chr3	TogoVar
ADRA1B_chr5_159911482_159978012	159963288	G G	GTATATAT others(27): Show GTATATATATATATATGTATATATATATATATATA	intron_variant intron_variant	MODIFIER	NA18975.hp1 NA18975.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0157 a0001c0001t0001g0157	1	384	0.0026	34	c.950 others(51): Show c.950-8576_950-8575insGTATATATATATATATATATATATATAT ATATAT	ADRA1B	ENSG00000170214.5	transcript	ENST00000306675.5	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr5	TogoVar
ADRA1D_chr20_4215630_4254287	4231064	T T	TTCTTTCT others(27): Show TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	intron_variant intron_variant	MODIFIER	HG00609.hp2 NA18964.hp1 NA19003.hp1 HG00609.hp2 NA18964.hp1 NA19003.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0083 a0001c0001t0001g0106 a0001c0001t0002g0107 a0001c0001t0001g0083 a0001c0001t0001g0106 a0001c0001t0002g0107	3	452	0.0066	34	c.111 others(53): Show c.1112-8935_1112-8934insGAAAGAAAGAAAGAAAGAAAGAAAGA AAGAAAGA	ADRA1D	ENSG00000171873.8	transcript	ENST00000379453.6	protein_coding	1/1			chr20	TogoVar
ADSS1_chr14_104719229_104752310	104720891	C C	CCTCGTGT others(27): Show CCTCGTGTGGATGCTGCTGTGGACGTCTGCGTCGT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18983.hp1 NA18983.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0187 a0001c0001t0001g0187	1	402	0.0025	34	c.-33 others(45): Show c.-3380_-3379insCTCGTGTGGATGCTGCTGTGGACGTCTGCGTCGT	ADSS1	ENSG00000185100.12	transcript	ENST00000330877.7	protein_coding		3337		chr14	TogoVar
AFAP1L1_chr5_149266859_149348637	149307818	T T	TTCTCTCT others(27): Show TTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	intron_variant intron_variant	MODIFIER	HG02083.hp2 HG02083.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0101 a0001c0001t0001g0101	1	286	0.0035	34	c.747 others(49): Show c.747+211_747+244dupCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT CTCT	AFAP1L1	ENSG00000157510.14	transcript	ENST00000296721.9	protein_coding	7/18		INFO_REALIGN_3_PRIME	chr5	TogoVar
AFAP1L2_chr10_114289824_114409502	114327147	T T	TTATATAT others(27): Show TTATATATATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01192.hp1 HG01192.hp2 HG02895.hp1 others(7): Show HG01192.hp1 HG01192.hp2 HG02895.hp1 NA18960.hp1 NA18960.hp2 NA18965.hp2 NA18966.hp1 NA18972.hp1 NA18990.hp1 NA18990.hp2	a0001 a0007 a0001 a0007	a0001c0001 a0001c0003 a0001c0004 others(1): Show a0001c0001 a0001c0003 a0001c0004 a0007c0017	a0001c0001t0001 a0001c0003t0002 a0001c0004t0001 others(1): Show a0001c0001t0001 a0001c0003t0002 a0001c0004t0001 a0007c0017t0001	a0001c0001t0001g0065 a0001c0001t0001g0074 a0001c0001t0001g0080 others(7): Show a0001c0001t0001g0065 a0001c0001t0001g0074 a0001c0001t0001g0080 a0001c0001t0001g0134 a0001c0003t0002g0147 a0001c0003t0002g0148 a0001c0003t0002g0240 a0001c0003t0002g0241 a0001c0004t0001g0182 a0007c0017t0001g0131	10	262	0.0382	34	c.316 others(51): Show c.316-3887_316-3886insTATATATATATATATATATATATATATA TATATA	AFAP1L2	ENSG00000169129.16	transcript	ENST00000304129.9	protein_coding	4/18			chr10	TogoVar
AFAP1L2_chr10_114289824_114409502	114327147	T T	TTTTATAT others(27): Show TTTTATATATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG04199.hp1 HG04199.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0002	a0001c0003t0002g0223 a0001c0003t0002g0223	1	262	0.0038	34	c.316 others(51): Show c.316-3887_316-3886insTATATATATATATATATATATATATATA TATAAA	AFAP1L2	ENSG00000169129.16	transcript	ENST00000304129.9	protein_coding	4/18			chr10	TogoVar
AFF1_chr4_86930011_87146039	86969879	C C	CAAAAAAA others(27): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02818.hp1 HG02922.hp2 others(2): Show HG01891.hp2 HG02818.hp1 HG02922.hp2 HG03209.hp1 HG06807.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0003 a0001c0002t0005 a0001c0002t0044 a0001c0001t0003 a0001c0002t0005 a0001c0002t0044	a0001c0001t0003g0192 a0001c0002t0005g0193 a0001c0002t0005g0194 others(2): Show a0001c0001t0003g0192 a0001c0002t0005g0193 a0001c0002t0005g0194 a0001c0002t0005g0197 a0001c0002t0044g0195	5	294	0.0170	34	c.38+ others(51): Show c.38+21326_38+21327insAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAA	AFF1	ENSG00000172493.23	transcript	ENST00000395146.9	protein_coding	2/20		INFO_REALIGN_3_PRIME	chr4	TogoVar
AFF2_chrX_148495617_149005663	148581036	C C	CACACATA others(27): Show CACACATATATACACATATGTGTATATGTATATAT	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG03139.hp1 HG01884.hp1 HG03139.hp1	a0001 a0001	a0001c0003 a0001c0004 a0001c0003 a0001c0004	a0001c0003t0030 a0001c0004t0113 a0001c0003t0030 a0001c0004t0113	a0001c0003t0030g0158 a0001c0004t0113g0159 a0001c0003t0030g0158 a0001c0004t0113g0159	2	169	0.0118	34	c.48- others(51): Show c.48-70957_48-70924dupTATATACACATATGTGTATATGTATATA TACACA	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20		INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148581272	A A	ATATACGT others(27): Show ATATACGTATACGTATACACACATATACGTATACG	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG01891.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0110 a0001c0001t0110	a0001c0001t0110g0118 a0001c0001t0110g0118	1	169	0.0059	34	c.48- others(51): Show c.48-70722_48-70721insGTATACGTATACACACATATACGTATAC GTATAC	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20		INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148762409	G G	GTATATAT others(27): Show GTATATATATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02809.hp1 HG02809.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0035 a0001c0001t0035	a0001c0001t0035g0078 a0001c0001t0035g0078	1	169	0.0059	34	c.104 others(55): Show c.1042-47455_1042-47454insTATATATATATATATATATATATA TATATATATA	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	3/20		INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148983965	A A	AAAAAAAA others(27): Show AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAC	intron_variant intron_variant	MODIFIER	HG02615.hp1 HG02615.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0092 a0001c0001t0092	a0001c0001t0092g0008 a0001c0001t0092g0008	1	169	0.0059	34	c.362 others(53): Show c.3623+3178_3623+3179insAAAAAAAAAAAAAAAAAAAAAAAAAA AAAACAAA	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	19/20		INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF3_chr2_99540419_100147590	99648917	A A	ACACACAC others(27): Show ACACACACACACACACACTCTCTCTCTCTCTCTCT	intron_variant intron_variant	MODIFIER	HG02965.hp2 HG02965.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0025 a0001c0001t0001g0025	1	100	0.0100	34	c.118 others(51): Show c.1184+708_1184+709insAGAGAGAGAGAGAGAGAGTGTGTGTGTG TGTGTG	AFF3	ENSG00000144218.21	transcript	ENST00000672756.2	protein_coding	13/24			chr2	TogoVar
AFF3_chr2_99540419_100147590	99648917	A A	ACACACAC others(27): Show ACACACACACACACTCTCTCTCTCTCTCTCTCTCT	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG02976.hp2 HG04199.hp1 HG02486.hp2 HG02976.hp2 HG04199.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0003t0003 a0001c0003t0006 a0001c0001t0001 a0001c0003t0003 a0001c0003t0006	a0001c0001t0001g0023 a0001c0003t0003g0026 a0001c0003t0006g0089 a0001c0001t0001g0023 a0001c0003t0003g0026 a0001c0003t0006g0089	3	100	0.0300	34	c.118 others(51): Show c.1184+708_1184+709insAGAGAGAGAGAGAGAGAGAGAGTGTGTG TGTGTG	AFF3	ENSG00000144218.21	transcript	ENST00000672756.2	protein_coding	13/24			chr2	TogoVar
AGAP1_chr2_235489043_236136793	235504337	T T	TTGCCTGT others(27): Show TTGCCTGTTTCAGGGGCTGTCAGTGTTTGAGTGGC	intron_variant intron_variant	MODIFIER	HG02572.hp2 HG03041.hp1 HG03540.hp1 HG02572.hp2 HG03041.hp1 HG03540.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0046 a0001c0001t0002g0047 a0001c0001t0002g0060 a0001c0001t0002g0046 a0001c0001t0002g0047 a0001c0001t0002g0060	3	98	0.0306	34	c.163 others(51): Show c.163+9498_163+9499insAGGGGCTGTCAGTGTTTGAGTGGCTGCC TGTTTC	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	235504337	T T	TTGCCTGT others(27): Show TTGCCTGTTTCGGGGGCTGTCAGTGTTTGAGTGGC	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG00642.hp2 HG01123.hp2 others(26): Show HG00642.hp1 HG00642.hp2 HG01123.hp2 HG01168.hp2 HG01192.hp1 HG01358.hp2 HG01884.hp1 HG01928.hp1 HG02080.hp1 HG02083.hp2 HG02109.hp2 HG02135.hp1 HG02145.hp2 HG02280.hp2 HG02630.hp1 HG02647.hp2 HG02723.hp2 HG02896.hp2 HG02976.hp2 HG03139.hp1 HG03195.hp1 HG03453.hp1 HG03471.hp1 HG03831.hp1 NA18906.hp2 NA19011.hp1 NA20300.hp1 NA20300.hp2 NA21309.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0003 others(6): Show a0001c0001 a0001c0002 a0001c0003 a0001c0005 a0001c0006 a0001c0010 a0002c0004 a0002c0007 a0002c0020	a0001c0001t0002 a0001c0001t0003 a0001c0001t0010 others(20): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0010 a0001c0001t0011 a0001c0001t0044 a0001c0001t0048 a0001c0002t0001 a0001c0002t0013 a0001c0002t0039 a0001c0003t0002 a0001c0003t0003 a0001c0003t0021 a0001c0005t0001 a0001c0005t0004 a0001c0006t0006 a0001c0006t0033 a0001c0006t0037 a0001c0010t0001 a0002c0004t0001 a0002c0004t0006 a0002c0007t0005 a0002c0007t0018 a0002c0020t0001	a0001c0001t0002g0002 a0001c0001t0003g0034 a0001c0001t0003g0063 others(26): Show a0001c0001t0002g0002 a0001c0001t0003g0034 a0001c0001t0003g0063 a0001c0001t0010g0003 a0001c0001t0011g0020 a0001c0001t0044g0041 a0001c0001t0048g0054 a0001c0002t0001g0004 a0001c0002t0001g0010 a0001c0002t0001g0018 a0001c0002t0001g0027 a0001c0002t0013g0035 a0001c0002t0039g0059 a0001c0003t0002g0005 a0001c0003t0003g0001 a0001c0003t0021g0023 a0001c0005t0001g0057 a0001c0005t0004g0058 a0001c0005t0004g0088 a0001c0006t0006g0019 a0001c0006t0033g0087 a0001c0006t0037g0021 a0001c0010t0001g0032 a0002c0004t0001g0017 a0002c0004t0001g0025 a0002c0004t0006g0024 a0002c0007t0005g0026 a0002c0007t0018g0028 a0002c0020t0001g0022	29	98	0.2959	34	c.163 others(51): Show c.163+9582_163+9615dupTTGAGTGGCTGCCTGTTTCGGGGGCTGT CAGTGT	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	235504473	T T	TTGCCTGT others(27): Show TTGCCTGTTTCGGGGGCTGTCAGTGTTTGAGTGGC	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG00642.hp2 HG01123.hp2 others(28): Show HG00642.hp1 HG00642.hp2 HG01123.hp2 HG01168.hp2 HG01192.hp1 HG01358.hp2 HG01884.hp1 HG01928.hp1 HG02080.hp1 HG02083.hp2 HG02109.hp2 HG02135.hp1 HG02145.hp2 HG02280.hp2 HG02572.hp2 HG02630.hp1 HG02647.hp2 HG02723.hp2 HG02896.hp2 HG02976.hp2 HG03041.hp1 HG03139.hp1 HG03195.hp1 HG03453.hp1 HG03540.hp1 HG03831.hp1 NA18906.hp2 NA19011.hp1 NA20300.hp1 NA20300.hp2 NA21309.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0003 others(6): Show a0001c0001 a0001c0002 a0001c0003 a0001c0005 a0001c0006 a0001c0010 a0002c0004 a0002c0007 a0002c0020	a0001c0001t0002 a0001c0001t0003 a0001c0001t0010 others(19): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0010 a0001c0001t0011 a0001c0001t0044 a0001c0002t0001 a0001c0002t0013 a0001c0002t0039 a0001c0003t0002 a0001c0003t0003 a0001c0003t0021 a0001c0005t0001 a0001c0005t0004 a0001c0006t0006 a0001c0006t0033 a0001c0006t0037 a0001c0010t0001 a0002c0004t0001 a0002c0004t0006 a0002c0007t0005 a0002c0007t0018 a0002c0020t0001	a0001c0001t0002g0002 a0001c0001t0002g0046 a0001c0001t0002g0047 others(28): Show a0001c0001t0002g0002 a0001c0001t0002g0046 a0001c0001t0002g0047 a0001c0001t0002g0060 a0001c0001t0003g0034 a0001c0001t0003g0063 a0001c0001t0010g0003 a0001c0001t0011g0020 a0001c0001t0044g0041 a0001c0002t0001g0004 a0001c0002t0001g0010 a0001c0002t0001g0018 a0001c0002t0001g0027 a0001c0002t0013g0035 a0001c0002t0039g0059 a0001c0003t0002g0005 a0001c0003t0003g0001 a0001c0003t0021g0023 a0001c0005t0001g0057 a0001c0005t0004g0058 a0001c0005t0004g0088 a0001c0006t0006g0019 a0001c0006t0033g0087 a0001c0006t0037g0021 a0001c0010t0001g0032 a0002c0004t0001g0017 a0002c0004t0001g0025 a0002c0004t0006g0024 a0002c0007t0005g0026 a0002c0007t0018g0028 a0002c0020t0001g0022	31	98	0.3163	34	c.163 others(51): Show c.163+9668_163+9701dupCGGGGGCTGTCAGTGTTTGAGTGGCTGC CTGTTT	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	235597691	C C	CTGTGTGG others(27): Show CTGTGTGGAGCGTGCATGCGCTCCCGTGTTTCCTG	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG02622.hp2 HG02572.hp1 HG02622.hp2	a0001 a0001	a0001c0002 a0001c0005 a0001c0002 a0001c0005	a0001c0002t0043 a0001c0005t0004 a0001c0002t0043 a0001c0005t0004	a0001c0002t0043g0064 a0001c0005t0004g0097 a0001c0002t0043g0064 a0001c0005t0004g0097	2	98	0.0204	34	c.163 others(55): Show c.163+102857_163+102858insTGCGCTCCCGTGTTTCCTGTGTGT GGAGCGTGCA	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP3_chr7_151081475_151149434	151136921	G G	GGGCAGCG others(27): Show GGGCAGCGACCTGTTTGTGGGTGGAGCTGGAGGGT	intron_variant intron_variant	MODIFIER	NA18969.hp2 NA18969.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0099 a0001c0001t0001g0099	1	354	0.0028	34	c.149 others(53): Show c.1496-1221_1496-1220insGCAGCGACCTGTTTGTGGGTGGAGCT GGAGGGTG	AGAP3	ENSG00000133612.20	transcript	ENST00000397238.7	protein_coding	11/17		INFO_REALIGN_3_PRIME	chr7	TogoVar
AGBL1_chr15_86074871_86921156	86262078	C C	CTTTTTTT others(27): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00544.hp1 HG00735.hp1 HG02738.hp1 others(1): Show HG00544.hp1 HG00735.hp1 HG02738.hp1 NA18747.hp2	a0001 a0001	a0001c0003 a0001c0006 a0001c0008 others(1): Show a0001c0003 a0001c0006 a0001c0008 a0001c0019	a0001c0003t0025 a0001c0006t0002 a0001c0008t0053 others(1): Show a0001c0003t0025 a0001c0006t0002 a0001c0008t0053 a0001c0019t0001	a0001c0003t0025g0016 a0001c0006t0002g0051 a0001c0008t0053g0042 others(1): Show a0001c0003t0025g0016 a0001c0006t0002g0051 a0001c0008t0053g0042 a0001c0019t0001g0058	4	132	0.0303	34	c.970 others(49): Show c.970-684_970-683insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT TTTT	AGBL1	ENSG00000273540.5	transcript	ENST00000614907.3	protein_coding	9/22		INFO_REALIGN_3_PRIME	chr15	TogoVar
AGBL1_chr15_86074871_86921156	86286735	G G	GTGTATAT others(27): Show GTGTATATATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01978.hp1 HG02615.hp2 HG02647.hp1 others(1): Show HG01978.hp1 HG02615.hp2 HG02647.hp1 HG03017.hp2	a0001 a0002 a0010 a0001 a0002 a0010	a0001c0004 a0002c0044 a0010c0017 a0001c0004 a0002c0044 a0010c0017	a0001c0004t0052 a0002c0044t0001 a0010c0017t0012 others(1): Show a0001c0004t0052 a0002c0044t0001 a0010c0017t0012 a0010c0017t0059	a0001c0004t0052g0030 a0002c0044t0001g0075 a0010c0017t0012g0090 others(1): Show a0001c0004t0052g0030 a0002c0044t0001g0075 a0010c0017t0012g0090 a0010c0017t0059g0070	4	132	0.0303	34	c.222 others(53): Show c.2220+6953_2220+6954insGTATATATATATATATATATATATAT ATATATAT	AGBL1	ENSG00000273540.5	transcript	ENST00000614907.3	protein_coding	16/22		INFO_REALIGN_3_PRIME	chr15	TogoVar
AGBL1_chr15_86074871_86921156	86735653	G G	GATATATA others(27): Show GATATATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03710.hp1 HG03710.hp1	a0001 a0001	a0001c0008 a0001c0008	a0001c0008t0001 a0001c0008t0001	a0001c0008t0001g0006 a0001c0008t0001g0006	1	132	0.0076	34	c.315 others(55): Show c.3158+61218_3158+61219insTATATATATATATATATATATATA TATATATATA	AGBL1	ENSG00000273540.5	transcript	ENST00000614907.3	protein_coding	22/22		INFO_REALIGN_3_PRIME	chr15	TogoVar
AGBL2_chr11_47654591_47720369	47691729	A A	AAAAAAAA others(27): Show AAAAAAAAAAAAAAAAAAAAAATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18956.hp1 NA18956.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0032 a0002c0002t0002g0032	1	356	0.0028	34	c.848 others(49): Show c.848+373_848+374insATATATATATATATTTTTTTTTTTTTTTTT TTTT	AGBL2	ENSG00000165923.17	transcript	ENST00000525123.6	protein_coding	9/18			chr11	TogoVar
AGBL2_chr11_47654591_47720369	47691729	A A	AAAAAAAA others(27): Show AAAAAAAAAAAAAAAAAAAATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02738.hp1 HG02738.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0033 a0002c0002t0002g0033	1	356	0.0028	34	c.848 others(49): Show c.848+373_848+374insATATATATATATATATTTTTTTTTTTTTTT TTTT	AGBL2	ENSG00000165923.17	transcript	ENST00000525123.6	protein_coding	9/18			chr11	TogoVar
AGBL2_chr11_47654591_47720369	47691729	A A	AAAAAAAA others(27): Show AAAAAAAAAAAAAAAATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18944.hp1 NA18994.hp2 NA18944.hp1 NA18994.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0070 a0002c0002t0002g0118 a0002c0002t0002g0070 a0002c0002t0002g0118	2	356	0.0056	34	c.848 others(49): Show c.848+373_848+374insATATATATATATATATATATTTTTTTTTTT TTTT	AGBL2	ENSG00000165923.17	transcript	ENST00000525123.6	protein_coding	9/18			chr11	TogoVar
AGBL3_chr7_134981508_135140778	135026244	A A	ATTATTTT others(27): Show ATTATTTTATTTTATTTTATTTTATTTTATTTATT	intron_variant intron_variant	MODIFIER	HG03209.hp2 HG03209.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0121 a0001c0001t0001g0121	1	320	0.0031	34	c.419 others(51): Show c.419-6569_419-6568insATTTTATTTTATTTTATTTTATTTTATT TTATTT	AGBL3	ENSG00000146856.14	transcript	ENST00000436302.6	protein_coding	5/16		INFO_REALIGN_3_PRIME	chr7	TogoVar
AGBL3_chr7_134981508_135140778	135026244	A A	ATTATTTT others(27): Show ATTATTTTATTTTATTTTATTTTATTTTATTTTAT	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG02257.hp2 NA20805.hp1 HG00735.hp1 HG02257.hp2 NA20805.hp1	a0001 a0002 a0001 a0002	a0001c0006 a0002c0002 a0001c0006 a0002c0002	a0001c0006t0005 a0002c0002t0001 a0001c0006t0005 a0002c0002t0001	a0001c0006t0005g0200 a0002c0002t0001g0018 a0002c0002t0001g0019 a0001c0006t0005g0200 a0002c0002t0001g0018 a0002c0002t0001g0019	3	320	0.0094	34	c.419 others(51): Show c.419-6597_419-6564dupATTTTATTTTATTTTATTTTATTTTATT TTATTT	AGBL3	ENSG00000146856.14	transcript	ENST00000436302.6	protein_coding	5/16		INFO_REALIGN_3_PRIME	chr7	TogoVar
AGBL3_chr7_134981508_135140778	135026244	A A	ATTATTTT others(27): Show ATTATTTTATTTTATTTTTTTTTATTTATTTTATT	intron_variant intron_variant	MODIFIER	HG03669.hp1 HG03669.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0027 a0002c0002t0002g0027	1	320	0.0031	34	c.419 others(51): Show c.419-6583_419-6582insTTTTTATTTATTTTATTTTATTTTATTT TATTTT	AGBL3	ENSG00000146856.14	transcript	ENST00000436302.6	protein_coding	5/16		INFO_REALIGN_3_PRIME	chr7	TogoVar
AGBL3_chr7_134981508_135140778	135026248	T T	TTTTATTT others(27): Show TTTTATTTTATTTTATTTTATTTTATTTTATTTTA	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG00639.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0276 a0002c0002t0001g0276	1	320	0.0031	34	c.419 others(51): Show c.419-6592_419-6559dupATTTTATTTTATTTTATTTTATTTTATT TTATTT	AGBL3	ENSG00000146856.14	transcript	ENST00000436302.6	protein_coding	5/16		INFO_REALIGN_3_PRIME	chr7	TogoVar
AGFG2_chr7_100534203_100573220	100551030	T T	TTATATAT others(27): Show TTATATATATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02129.hp2 HG02129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0186 a0001c0001t0001g0186	1	246	0.0041	34	c.431 others(49): Show c.431+523_431+556dupATATATATATATATATATATATATATATAT ATAT	AGFG2	ENSG00000106351.13	transcript	ENST00000300176.9	protein_coding	3/11		INFO_REALIGN_3_PRIME	chr7	TogoVar
AGFG2_chr7_100534203_100573220	100551066	A A	ATATATAT others(27): Show ATATATATATATATATATATATTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0006 a0006	a0006c0009 a0006c0009	a0006c0009t0001 a0006c0009t0001	a0006c0009t0001g0059 a0006c0009t0001g0059	1	246	0.0041	34	c.431 others(49): Show c.431+556_431+557insATATATATATATATATATATTTTTTTTTTT TTTT	AGFG2	ENSG00000106351.13	transcript	ENST00000300176.9	protein_coding	3/11		INFO_REALIGN_3_PRIME	chr7	TogoVar
AGK_chr7_141546410_141660244	141602173	T T	TTGTGTGT others(27): Show TTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	NA19007.hp2 NA19007.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0075 a0001c0001t0001g0075	1	274	0.0037	34	c.297 others(49): Show c.297+899_297+932dupGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT GTGT	AGK	ENSG00000006530.18	transcript	ENST00000649286.2	protein_coding	5/15		INFO_REALIGN_3_PRIME	chr7	TogoVar
AGMO_chr7_15195317_15567015	15198203	G G	GAGAGACA others(27): Show GAGAGACAGAGAGAGAGAGAGAGAGAGAGAGAGAC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03486.hp1 HG03516.hp2 HG03486.hp1 HG03516.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0199 a0001c0001t0005g0200 a0001c0001t0005g0199 a0001c0001t0005g0200	2	236	0.0085	34	c.30 others(45): Show c.3081_*3082insGTCTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCT	AGMO	ENSG00000187546.14	transcript	ENST00000342526.8	protein_coding		2113		chr7	TogoVar
AGMO_chr7_15195317_15567015	15432369	C C	CACACACA others(27): Show CACACACATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02572.hp2 HG02572.hp2	a0014 a0014	a0014c0014 a0014c0014	a0014c0014t0001 a0014c0014t0001	a0014c0014t0001g0180 a0014c0014t0001g0180	1	236	0.0042	34	c.410 others(51): Show c.410-1262_410-1261insATATATATATATATATATATATATATAT GTGTGT	AGMO	ENSG00000187546.14	transcript	ENST00000342526.8	protein_coding	3/12			chr7	TogoVar
AGMO_chr7_15195317_15567015	15432379	T T	TATATATA others(27): Show TATATATATATATATATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	HG02735.hp2 HG02735.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0130 a0001c0001t0001g0130	1	236	0.0042	34	c.410 others(51): Show c.410-1272_410-1271insGTATATATATATATATATATATATATAT ATATAT	AGMO	ENSG00000187546.14	transcript	ENST00000342526.8	protein_coding	3/12			chr7	TogoVar
AGPS_chr2_177387773_177548834	177450964	A A	ATATATAT others(27): Show ATATATATATATATATACACATATACGTATATATG	intron_variant intron_variant	MODIFIER	HG03486.hp2 HG03486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0035 a0001c0001t0035	a0001c0001t0035g0017 a0001c0001t0035g0017	1	258	0.0039	34	c.870 others(51): Show c.870+5349_870+5350insATATACACATATACGTATATATGTATAT ATATAT	AGPS	ENSG00000018510.18	transcript	ENST00000264167.11	protein_coding	8/19		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGPS_chr2_177387773_177548834	177450964	A A	ATATATAT others(27): Show ATATATATATATATATACACATATATGTATATATG	intron_variant intron_variant	MODIFIER	HG00408.hp2 HG00423.hp2 HG00438.hp2 others(88): Show HG00408.hp2 HG00423.hp2 HG00438.hp2 HG00544.hp2 HG00558.hp1 HG00597.hp1 HG00609.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp2 HG00735.hp2 HG00738.hp1 HG01074.hp2 HG01081.hp1 HG01109.hp2 HG01167.hp1 HG01168.hp1 HG01169.hp2 HG01175.hp1 HG01243.hp2 HG01255.hp2 HG01256.hp1 HG01257.hp2 HG01361.hp2 HG01496.hp1 HG01928.hp1 HG01978.hp2 HG02027.hp1 HG02074.hp1 HG02132.hp2 HG02602.hp2 HG02615.hp1 HG02698.hp1 HG02735.hp2 HG02818.hp2 HG03041.hp1 HG03139.hp1 HG03239.hp2 HG03704.hp2 HG03831.hp1 HG03927.hp1 HG04184.hp2 HG04199.hp1 NA18939.hp1 NA18941.hp2 NA18943.hp2 NA18944.hp1 NA18945.hp2 NA18946.hp2 NA18947.hp2 NA18949.hp2 NA18950.hp2 NA18951.hp2 NA18952.hp1 NA18953.hp2 NA18963.hp1 NA18964.hp2 NA18965.hp2 NA18966.hp1 NA18968.hp2 NA18969.hp1 NA18972.hp1 NA18975.hp1 NA18980.hp1 NA18981.hp2 NA18985.hp1 NA18987.hp1 NA18992.hp1 NA18998.hp2 NA18999.hp1 NA19000.hp1 NA19002.hp2 NA19004.hp1 NA19010.hp1 NA19011.hp2 NA19054.hp2 NA19057.hp2 NA19058.hp2 NA19062.hp2 NA19065.hp1 NA19078.hp2 NA19082.hp2 NA19083.hp2 NA19087.hp2 NA19088.hp2 NA19090.hp1 NA19091.hp1 NA19240.hp1 NA20752.hp1 NA20752.hp2 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0009 a0001c0001t0010 others(11): Show a0001c0001t0001 a0001c0001t0009 a0001c0001t0010 a0001c0001t0013 a0001c0001t0020 a0001c0001t0022 a0001c0001t0029 a0001c0001t0032 a0001c0001t0038 a0001c0001t0039 a0001c0001t0042 a0001c0001t0043 a0001c0001t0044 a0001c0001t0047	a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0107 others(88): Show a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0111 a0001c0001t0001g0112 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0117 a0001c0001t0001g0118 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0122 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0129 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0136 a0001c0001t0001g0137 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0140 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0144 a0001c0001t0001g0145 a0001c0001t0001g0151 a0001c0001t0001g0152 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0163 a0001c0001t0001g0165 a0001c0001t0001g0167 a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0171 a0001c0001t0001g0172 a0001c0001t0001g0173 a0001c0001t0001g0175 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0178 a0001c0001t0001g0179 a0001c0001t0001g0180 a0001c0001t0001g0182 a0001c0001t0001g0183 a0001c0001t0001g0184 a0001c0001t0001g0185 a0001c0001t0001g0186 a0001c0001t0001g0187 a0001c0001t0001g0189 a0001c0001t0001g0190 a0001c0001t0001g0191 a0001c0001t0001g0192 a0001c0001t0001g0193 a0001c0001t0001g0194 a0001c0001t0001g0252 a0001c0001t0009g0091 a0001c0001t0009g0146 a0001c0001t0009g0155 a0001c0001t0009g0162 a0001c0001t0010g0123 a0001c0001t0010g0147 a0001c0001t0010g0170 a0001c0001t0010g0205 a0001c0001t0013g0188 a0001c0001t0020g0126 a0001c0001t0022g0134 a0001c0001t0022g0135 a0001c0001t0029g0166 a0001c0001t0032g0210 a0001c0001t0038g0181 a0001c0001t0039g0164 a0001c0001t0042g0148 a0001c0001t0043g0143 a0001c0001t0044g0149 a0001c0001t0047g0150	91	258	0.3527	34	c.870 others(51): Show c.870+5349_870+5350insATATACACATATATGTATATATGTATAT ATATAT	AGPS	ENSG00000018510.18	transcript	ENST00000264167.11	protein_coding	8/19		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGPS_chr2_177387773_177548834	177450964	A A	ATATATAT others(27): Show ATATATATATATATATATACATATATGTATATATG	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG01168.hp2 HG01255.hp1 others(15): Show HG01081.hp2 HG01168.hp2 HG01255.hp1 HG01884.hp1 HG01891.hp2 HG02109.hp2 HG02738.hp2 HG02809.hp2 HG02886.hp1 HG02896.hp2 HG02922.hp2 HG03209.hp2 HG03225.hp1 HG03239.hp1 HG03540.hp2 NA18522.hp1 NA19043.hp2 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0003 a0001c0001t0015 a0001c0001t0026 others(4): Show a0001c0001t0003 a0001c0001t0015 a0001c0001t0026 a0001c0001t0027 a0001c0001t0028 a0001c0001t0030 a0001c0004t0031	a0001c0001t0003g0229 a0001c0001t0003g0230 a0001c0001t0003g0231 others(15): Show a0001c0001t0003g0229 a0001c0001t0003g0230 a0001c0001t0003g0231 a0001c0001t0003g0232 a0001c0001t0003g0233 a0001c0001t0003g0235 a0001c0001t0003g0237 a0001c0001t0003g0239 a0001c0001t0003g0240 a0001c0001t0003g0241 a0001c0001t0003g0242 a0001c0001t0003g0243 a0001c0001t0015g0225 a0001c0001t0026g0236 a0001c0001t0027g0226 a0001c0001t0028g0227 a0001c0001t0030g0244 a0001c0004t0031g0222	18	258	0.0698	34	c.870 others(51): Show c.870+5349_870+5350insATATATACATATATGTATATATGTATAT ATATAT	AGPS	ENSG00000018510.18	transcript	ENST00000264167.11	protein_coding	8/19		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGRN_chr1_1015120_1061116	1029942	T T	TGTGTGTG others(27): Show TGTGTGTGTGCAGTGCATGGTGCTGTGAGATCAGC	intron_variant intron_variant	MODIFIER	HG02922.hp1 HG02922.hp1	a0001 a0001	a0001c0047 a0001c0047	a0001c0047t0001 a0001c0047t0001	a0001c0047t0001g0061 a0001c0047t0001g0061	1	210	0.0048	34	c.464 others(51): Show c.464-5326_464-5325insCAGTGCATGGTGCTGTGAGATCAGCGTG TGTGTG	AGRN	ENSG00000188157.15	transcript	ENST00000379370.7	protein_coding	2/35		INFO_REALIGN_3_PRIME	chr1	TogoVar
AGRN_chr1_1015120_1061116	1049112	G G	GGGGCCGG others(27): Show GGGGCCGGGGCAGCTCAGGTGGGCGGGGAGGGGAC	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02109.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0069 a0001c0001t0001g0069	1	210	0.0048	34	c.429 others(49): Show c.4298+55_4298+56insGCCGGGGCAGCTCAGGTGGGCGGGGAGGGG ACGG	AGRN	ENSG00000188157.15	transcript	ENST00000379370.7	protein_coding	24/35		INFO_REALIGN_3_PRIME	chr1	TogoVar
AGTR1_chr3_148692903_148748003	148745791	T T	TTTTATTT others(27): Show TTTTATTTTAATTAATTTTATTTTATTTTATTTTA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02622.hp1 HG02622.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0041 a0001c0001t0002g0041	1	350	0.0029	34	c.36 others(45): Show c.3676_*3677insTTTATTTTAATTAATTTTATTTTATTTTATTTTA	AGTR1	ENSG00000144891.19	transcript	ENST00000349243.8	protein_coding		2789		chr3	TogoVar
AHCYL2_chr7_129220030_129435211	129365628	G G	GTATATAT others(27): Show GTATATATATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01255.hp2 HG02809.hp2 HG02818.hp1 others(2): Show HG01255.hp2 HG02809.hp2 HG02818.hp1 NA18947.hp2 NA19066.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0006 a0001c0001t0001 a0001c0001t0006	a0001c0001t0001g0032 a0001c0001t0001g0069 a0001c0001t0001g0083 others(2): Show a0001c0001t0001g0032 a0001c0001t0001g0069 a0001c0001t0001g0083 a0001c0001t0001g0103 a0001c0001t0006g0126	5	292	0.0171	34	c.364 others(53): Show c.364-13993_364-13992insATATATATATATATATATATATATAT ATATATAT	AHCYL2	ENSG00000158467.17	transcript	ENST00000325006.8	protein_coding	1/16		INFO_REALIGN_3_PRIME	chr7	TogoVar
AHNAK2_chr14_104932253_104983374	104933706	G G	GGGGAGGG others(27): Show GGGGAGGGTGGGAGGGGAGCGGGGCTGAGGGGACC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00558.hp2 HG00597.hp2 HG00609.hp1 others(91): Show HG00558.hp2 HG00597.hp2 HG00609.hp1 HG00621.hp2 HG00642.hp2 HG00738.hp1 HG00741.hp2 HG01099.hp2 HG01175.hp2 HG01261.hp2 HG01952.hp2 HG01975.hp1 HG01993.hp1 HG02004.hp1 HG02027.hp1 HG02027.hp2 HG02040.hp2 HG02055.hp2 HG02056.hp1 HG02080.hp2 HG02083.hp1 HG02132.hp1 HG02148.hp2 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02300.hp1 HG02486.hp2 HG02559.hp2 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02647.hp2 HG02723.hp1 HG02738.hp2 HG02896.hp2 HG02897.hp1 HG02976.hp1 HG02976.hp2 HG03017.hp2 HG03098.hp1 HG03098.hp2 HG03195.hp2 HG03209.hp1 HG03225.hp1 HG03225.hp2 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03492.hp2 HG03516.hp2 HG03540.hp1 HG03834.hp2 HG03927.hp2 HG03942.hp1 HG04115.hp2 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18906.hp2 NA18945.hp2 NA18948.hp2 NA18951.hp1 NA18952.hp1 NA18954.hp1 NA18959.hp2 NA18964.hp2 NA18966.hp1 NA18966.hp2 NA18968.hp2 NA18969.hp1 NA18977.hp2 NA18981.hp2 NA18984.hp2 NA18986.hp1 NA18998.hp2 NA18999.hp2 NA19005.hp1 NA19007.hp2 NA19009.hp1 NA19010.hp2 NA19011.hp1 NA19012.hp2 NA19030.hp1 NA19058.hp2 NA19063.hp1 NA19065.hp1 NA19074.hp1 NA19081.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2	a0006 a0009 a0010 others(62): Show a0006 a0009 a0010 a0015 a0017 a0018 a0019 a0020 a0027 a0032 a0034 a0035 a0044 a0046 a0053 a0057 a0066 a0067 a0069 a0070 a0072 a0074 a0077 a0079 a0080 a0082 a0083 a0084 a0086 a0087 a0088 a0089 a0090 a0093 a0094 a0095 a0096 a0097 a0102 a0103 a0105 a0125 a0126 a0127 a0128 a0130 a0131 a0132 a0144 a0149 a0157 a0161 a0169 a0170 a0173 a0179 a0180 a0182 a0183 a0195 a0196 a0207 a0208 a0210 a0211	a0006c0006 a0006c0200 a0009c0043 others(68): Show a0006c0006 a0006c0200 a0009c0043 a0009c0185 a0009c0186 a0010c0011 a0015c0035 a0015c0122 a0015c0125 a0017c0015 a0018c0017 a0019c0016 a0020c0018 a0027c0189 a0027c0190 a0032c0050 a0034c0048 a0035c0023 a0044c0049 a0046c0032 a0053c0246 a0057c0156 a0066c0202 a0067c0058 a0069c0184 a0070c0170 a0072c0178 a0074c0179 a0077c0182 a0079c0183 a0080c0180 a0082c0174 a0083c0176 a0084c0181 a0086c0188 a0087c0187 a0088c0198 a0089c0196 a0090c0195 a0093c0192 a0094c0194 a0095c0197 a0096c0199 a0097c0201 a0102c0064 a0103c0065 a0105c0211 a0125c0242 a0126c0240 a0127c0241 a0128c0239 a0130c0075 a0131c0235 a0132c0236 a0144c0238 a0149c0086 a0157c0080 a0161c0079 a0169c0237 a0170c0105 a0173c0114 a0179c0121 a0180c0120 a0182c0128 a0183c0130 a0195c0243 a0196c0207 a0207c0206 a0208c0056 a0210c0055 a0211c0247	a0006c0006t0002 a0006c0200t0002 a0009c0043t0002 others(68): Show a0006c0006t0002 a0006c0200t0002 a0009c0043t0002 a0009c0185t0002 a0009c0186t0002 a0010c0011t0002 a0015c0035t0002 a0015c0122t0002 a0015c0125t0002 a0017c0015t0002 a0018c0017t0005 a0019c0016t0005 a0020c0018t0002 a0027c0189t0002 a0027c0190t0002 a0032c0050t0003 a0034c0048t0003 a0035c0023t0002 a0044c0049t0003 a0046c0032t0002 a0053c0246t0002 a0057c0156t0010 a0066c0202t0005 a0067c0058t0002 a0069c0184t0002 a0070c0170t0002 a0072c0178t0002 a0074c0179t0003 a0077c0182t0003 a0079c0183t0003 a0080c0180t0002 a0082c0174t0003 a0083c0176t0003 a0084c0181t0002 a0086c0188t0002 a0087c0187t0002 a0088c0198t0002 a0089c0196t0002 a0090c0195t0002 a0093c0192t0002 a0094c0194t0002 a0095c0197t0005 a0096c0199t0002 a0097c0201t0002 a0102c0064t0003 a0103c0065t0003 a0105c0211t0002 a0125c0242t0003 a0126c0240t0003 a0127c0241t0003 a0128c0239t0003 a0130c0075t0002 a0131c0235t0003 a0132c0236t0003 a0144c0238t0003 a0149c0086t0002 a0157c0080t0003 a0161c0079t0012 a0169c0237t0003 a0170c0105t0002 a0173c0114t0002 a0179c0121t0002 a0180c0120t0002 a0182c0128t0002 a0183c0130t0002 a0195c0243t0003 a0196c0207t0002 a0207c0206t0002 a0208c0056t0003 a0210c0055t0003 a0211c0247t0002	a0006c0006t0002g0005 a0006c0006t0002g0029 a0006c0200t0002g0199 others(77): Show a0006c0006t0002g0005 a0006c0006t0002g0029 a0006c0200t0002g0199 a0009c0043t0002g0173 a0009c0043t0002g0194 a0009c0185t0002g0193 a0009c0186t0002g0195 a0010c0011t0002g0176 a0010c0011t0002g0179 a0010c0011t0002g0204 a0010c0011t0002g0219 a0015c0035t0002g0020 a0015c0122t0002g0102 a0015c0125t0002g0084 a0017c0015t0002g0030 a0017c0015t0002g0162 a0018c0017t0005g0008 a0019c0016t0005g0028 a0019c0016t0005g0177 a0020c0018t0002g0009 a0027c0189t0002g0227 a0027c0190t0002g0228 a0032c0050t0003g0136 a0032c0050t0003g0145 a0034c0048t0003g0023 a0035c0023t0002g0017 a0044c0049t0003g0131 a0044c0049t0003g0133 a0046c0032t0002g0019 a0053c0246t0002g0074 a0057c0156t0010g0046 a0066c0202t0005g0203 a0067c0058t0002g0302 a0069c0184t0002g0209 a0070c0170t0002g0246 a0072c0178t0002g0298 a0074c0179t0003g0297 a0077c0182t0003g0170 a0079c0183t0003g0164 a0080c0180t0002g0181 a0082c0174t0003g0072 a0083c0176t0003g0073 a0084c0181t0002g0159 a0086c0188t0002g0182 a0087c0187t0002g0208 a0088c0198t0002g0175 a0089c0196t0002g0198 a0090c0195t0002g0205 a0093c0192t0002g0197 a0094c0194t0002g0166 a0095c0197t0005g0178 a0096c0199t0002g0229 a0097c0201t0002g0200 a0102c0064t0003g0157 a0103c0065t0003g0156 a0105c0211t0002g0061 a0125c0242t0003g0137 a0126c0240t0003g0146 a0127c0241t0003g0138 a0128c0239t0003g0135 a0130c0075t0002g0093 a0131c0235t0003g0132 a0132c0236t0003g0147 a0144c0238t0003g0070 a0149c0086t0002g0081 a0157c0080t0003g0121 a0161c0079t0012g0141 a0169c0237t0003g0139 a0170c0105t0002g0076 a0173c0114t0002g0288 a0179c0121t0002g0101 a0180c0120t0002g0279 a0182c0128t0002g0269 a0183c0130t0002g0105 a0195c0243t0003g0148 a0196c0207t0002g0153 a0207c0206t0002g0223 a0208c0056t0003g0115 a0210c0055t0003g0114 a0211c0247t0002g0206	94	356	0.2640	34	c.43 others(45): Show c.4356_*4357insGGTCCCCTCAGCCCCGCTCCCCTCCCACCCTCCC	AHNAK2	ENSG00000185567.7	transcript	ENST00000333244.6	protein_coding		3546		chr14	TogoVar
AHRR_chr5_316714_443285	340688	A A	ATATATAT others(27): Show ATATATATATATATATATATATATATATATATTTT	intron_variant intron_variant	MODIFIER	NA18522.hp1 NA19085.hp1 NA18522.hp1 NA19085.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0024 a0002c0002t0001 a0001c0001t0024 a0002c0002t0001	a0001c0001t0024g0031 a0002c0002t0001g0201 a0001c0001t0024g0031 a0002c0002t0001g0201	2	268	0.0075	34	c.-10 others(51): Show c.-10-3204_-10-3203insATATATATATATATATATATATATATAT ATTTTT	AHRR	ENSG00000063438.20	transcript	ENST00000684583.1	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr5	TogoVar
AHRR_chr5_316714_443285	340688	A A	ATATATAT others(27): Show ATATATATATATATATATATATATATATATTTTTT	intron_variant intron_variant	MODIFIER	HG01358.hp1 HG02886.hp2 HG01358.hp1 HG02886.hp2	a0002 a0004 a0002 a0004	a0002c0002 a0004c0003 a0002c0002 a0004c0003	a0002c0002t0010 a0004c0003t0007 a0002c0002t0010 a0004c0003t0007	a0002c0002t0010g0015 a0004c0003t0007g0266 a0002c0002t0010g0015 a0004c0003t0007g0266	2	268	0.0075	34	c.-10 others(51): Show c.-10-3204_-10-3203insATATATATATATATATATATATATATAT TTTTTT	AHRR	ENSG00000063438.20	transcript	ENST00000684583.1	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr5	TogoVar
AHRR_chr5_316714_443285	340688	A A	ATATATAT others(27): Show ATATATATATATATATATATATATATATTTTTTTT	intron_variant intron_variant	MODIFIER	HG01517.hp2 HG01517.hp2	a0010 a0010	a0010c0020 a0010c0020	a0010c0020t0001 a0010c0020t0001	a0010c0020t0001g0170 a0010c0020t0001g0170	1	268	0.0037	34	c.-10 others(51): Show c.-10-3204_-10-3203insATATATATATATATATATATATATATTT TTTTTT	AHRR	ENSG00000063438.20	transcript	ENST00000684583.1	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr5	TogoVar
AHRR_chr5_316714_443285	340688	A A	ATATATAT others(27): Show ATATATATATATATATATATATATATTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18998.hp2 NA18998.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0011 a0002c0002t0011	a0002c0002t0011g0197 a0002c0002t0011g0197	1	268	0.0037	34	c.-10 others(51): Show c.-10-3204_-10-3203insATATATATATATATATATATATATTTTT TTTTTT	AHRR	ENSG00000063438.20	transcript	ENST00000684583.1	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr5	TogoVar

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