Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

Chr

Snpeff genename

Sampleids

Snpeff haplotype class

Snpeff annotation impact

Snpeff annotation impact detail

Hapid

Samplehapid

No_hapid

No_samplehapid

Start

End

Minac

Maxac

Minlen

Maxlen

Sort By

Order by

regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
LPA_chr6_160526482_160669275	160576352	A A	ATATATAT others(27): Show ATATATATATATACATATATATATATATATATGTG	intron_variant intron_variant	MODIFIER	HG00609.hp1 HG01952.hp1 HG00609.hp1 HG01952.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0024 a0001c0001t0002g0037 a0001c0001t0002g0024 a0001c0001t0002g0037	2	146	0.0137	34	c.463 others(51): Show c.4631+783_4631+784insCACATATATATATATATATATGTATATA TATATA	LPA	ENSG00000198670.13	transcript	ENST00000316300.10	protein_coding	28/38			chr6	TogoVar
LPA_chr6_160526482_160669275	160654050	A A	ATATAATA others(27): Show ATATAATATATATTATATATTATATTATATATAAT	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG01109.hp2 HG02027.hp2 others(2): Show HG00639.hp2 HG01109.hp2 HG02027.hp2 HG03669.hp2 NA20805.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0001c0036 a0003c0003 others(2): Show a0001c0001 a0001c0036 a0003c0003 a0003c0008 a0003c0052	a0001c0001t0002 a0001c0036t0001 a0003c0003t0001 others(2): Show a0001c0001t0002 a0001c0036t0001 a0003c0003t0001 a0003c0008t0001 a0003c0052t0001	a0001c0001t0002g0027 a0001c0036t0001g0059 a0003c0003t0001g0056 others(2): Show a0001c0001t0002g0027 a0001c0036t0001g0059 a0003c0003t0001g0056 a0003c0008t0001g0053 a0003c0052t0001g0054	5	115	0.0435	34	c.50- others(49): Show c.50-3554_50-3553insATTATATATAATATAATATATAATATATAT TATA	LPA	ENSG00000198670.13	transcript	ENST00000316300.10	protein_coding	1/38			chr6	TogoVar
LPIN2_chr18_2911999_3018144	2956311	G G	GGTGTGTG others(27): Show GGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG01943.hp2 HG01981.hp2 others(6): Show HG00099.hp1 HG01943.hp2 HG01981.hp2 HG02895.hp1 HG02897.hp1 HG03098.hp1 HG03831.hp2 NA18939.hp2 NA18981.hp1	a0001 a0001	a0001c0001 a0001c0017 a0001c0001 a0001c0017	a0001c0001t0003 a0001c0001t0005 a0001c0001t0024 others(3): Show a0001c0001t0003 a0001c0001t0005 a0001c0001t0024 a0001c0001t0031 a0001c0001t0051 a0001c0017t0014	a0001c0001t0003g0027 a0001c0001t0005g0121 a0001c0001t0005g0122 others(6): Show a0001c0001t0003g0027 a0001c0001t0005g0121 a0001c0001t0005g0122 a0001c0001t0005g0303 a0001c0001t0024g0031 a0001c0001t0031g0028 a0001c0001t0051g0162 a0001c0001t0051g0163 a0001c0017t0014g0171	9	29	0.3103	34	c.193 others(51): Show c.193-1746_193-1713dupACACACACACACACACACACACACACAC ACACAC	LPIN2	ENSG00000101577.11	transcript	ENST00000677752.1	protein_coding	2/19			chr18	TogoVar
LPP_chr3_188149157_188895671	188203455	A A	ATAAATAT others(27): Show ATAAATATATATATTTTTAAATATATATATATTTT	intron_variant intron_variant	MODIFIER	HG01074.hp1 HG03195.hp2 HG03540.hp1 HG01074.hp1 HG03195.hp2 HG03540.hp1	a0002 a0002	a0002c0003 a0002c0004 a0002c0003 a0002c0004	a0002c0003t0029 a0002c0004t0004 a0002c0004t0013 a0002c0003t0029 a0002c0004t0004 a0002c0004t0013	a0002c0003t0029g0064 a0002c0004t0004g0038 a0002c0004t0013g0049 a0002c0003t0029g0064 a0002c0004t0004g0038 a0002c0004t0013g0049	3	74	0.0405	34	c.-18 others(55): Show c.-189-21937_-189-21904dupTTTTTAAATATATATATATTTTTA AATATATATA	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	1/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188248468	T T	TTATATAT others(27): Show TTATATATATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG03453.hp1 HG03453.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0030 a0002c0003t0030	a0002c0003t0030g0062 a0002c0003t0030g0062	1	22	0.0455	34	c.-67 others(53): Show c.-67+22971_-67+22972insTATATATATATATATATATATATATA TATATATA	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	2/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188248495	T T	TATATATA others(27): Show TATATATATATATATATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	HG03195.hp1 HG03195.hp1	a0002 a0002	a0002c0015 a0002c0015	a0002c0015t0036 a0002c0015t0036	a0002c0015t0036g0039 a0002c0015t0036g0039	1	74	0.0135	34	c.-67 others(53): Show c.-67+22971_-67+22972insTATATATATATATATATATATATATA TATACATA	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	2/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188485796	C C	CAAAAAAA others(27): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03453.hp1 HG03453.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0030 a0002c0003t0030	a0002c0003t0030g0062 a0002c0003t0030g0062	1	8	0.1250	34	c.306 others(51): Show c.306+1110_306+1111insAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAA	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	5/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188495064	T T	TTATATAT others(27): Show TTATATATATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG00673.hp1 HG01167.hp2 HG03239.hp1 HG00673.hp1 HG01167.hp2 HG03239.hp1	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0019 a0001c0001t0054 a0001c0005t0041 a0001c0001t0019 a0001c0001t0054 a0001c0005t0041	a0001c0001t0019g0072 a0001c0001t0054g0012 a0001c0005t0041g0037 a0001c0001t0019g0072 a0001c0001t0054g0012 a0001c0005t0041g0037	3	40	0.0750	34	c.306 others(53): Show c.306+10379_306+10380insATATATATATATATATATATATATAT ATATATAT	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	5/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188592563	T T	TTGTTTGT others(27): Show TTGTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTGG	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG03098.hp2 HG02109.hp2 HG03098.hp2	a0002 a0003 a0002 a0003	a0002c0008 a0003c0011 a0002c0008 a0003c0011	a0002c0008t0059 a0003c0011t0005 a0002c0008t0059 a0003c0011t0005	a0002c0008t0059g0015 a0003c0011t0005g0071 a0002c0008t0059g0015 a0003c0011t0005g0071	2	33	0.0606	34	c.430 others(53): Show c.430-16598_430-16597insTGTTTGTTTTTTTTTTTTTTTTTTTT TTTTTTGG	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	6/11			chr3	TogoVar
LPP_chr3_188149157_188895671	188784817	T T	TATATATA others(27): Show TATATATATATTCCATCATATATATATATTCCATC	intron_variant intron_variant	MODIFIER	HG03139.hp1 HG03139.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0014 a0002c0003t0014	a0002c0003t0014g0027 a0002c0003t0014g0027	1	74	0.0135	34	c.141 others(55): Show c.1410+24546_1410+24579dupTCCATCATATATATATATTCCATC ATATATATAT	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	9/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188843786	C C	CAAAAAAA others(27): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02630.hp2 HG02630.hp2	a0003 a0003	a0003c0009 a0003c0009	a0003c0009t0016 a0003c0009t0016	a0003c0009t0016g0069 a0003c0009t0016g0069	1	32	0.0313	34	c.141 others(55): Show c.1411-22402_1411-22401insAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAA	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	9/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LRBA_chr4_150259435_151020284	150489064	T T	TAATATAT others(27): Show TAATATATTATATATAATATTATATAAGAATATAC	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG01243.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0093 a0001c0001t0002g0093	1	175	0.0057	34	c.644 others(53): Show c.6449-1264_6449-1231dupGTATATTCTTATATAATATTATATAT AATATATT	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	41/56			chr4	TogoVar
LRBA_chr4_150259435_151020284	150648158	C C	CAAAAAAA others(27): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG00735.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0085 a0001c0001t0002g0085	1	33	0.0303	34	c.592 others(55): Show c.5921+35392_5921+35393insTTTTTTTTTTTTTTTTTTTTTTTT TTTTTTTTTT	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	37/56			chr4	TogoVar
LRBA_chr4_150259435_151020284	150694462	C C	CAAAAAAA others(27): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA18979.hp1 NA21309.hp1 NA18979.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0013 a0001c0001 a0001c0013	a0001c0001t0001 a0001c0013t0001 a0001c0001t0001 a0001c0013t0001	a0001c0001t0001g0106 a0001c0013t0001g0095 a0001c0001t0001g0106 a0001c0013t0001g0095	2	33	0.0606	34	c.575 others(55): Show c.5755-10746_5755-10745insTTTTTTTTTTTTTTTTTTTTTTTT TTTTTTTTTT	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	36/56			chr4	TogoVar
LRBA_chr4_150259435_151020284	150780633	A A	ATATATAT others(27): Show ATATATATACGTGTATATATATACATATATATACG	intron_variant intron_variant	MODIFIER	HG01255.hp1 HG01255.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0005 a0001c0001t0002g0005	1	43	0.0233	34	c.558 others(55): Show c.5580+17447_5580+17448insCGTATATATATGTATATATATACA CGTATATATA	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	34/56			chr4	TogoVar
LRBA_chr4_150259435_151020284	150780635	A A	ATATATAC others(27): Show ATATATACGTGTATATATATACATATATATACACG	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02109.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0153 a0001c0001t0002g0153	1	174	0.0057	34	c.558 others(55): Show c.5580+17445_5580+17446insCGTGTATATATATGTATATATATA CACGTATATA	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	34/56			chr4	TogoVar
LRCH1_chr13_46548170_46749898	46560140	C C	CATATATA others(27): Show CATATATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01167.hp1 HG01169.hp1 HG02055.hp2 others(1): Show HG01167.hp1 HG01169.hp1 HG02055.hp2 HG02698.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0011 a0001c0001t0001 a0001c0001t0004 a0001c0001t0011	a0001c0001t0001g0017 a0001c0001t0004g0053 a0001c0001t0004g0066 others(1): Show a0001c0001t0001g0017 a0001c0001t0004g0053 a0001c0001t0004g0066 a0001c0001t0011g0077	4	165	0.0242	34	c.307 others(51): Show c.307+6446_307+6447insTATATATATATATATATATATATATATA TATATA	LRCH1	ENSG00000136141.15	transcript	ENST00000389797.8	protein_coding	1/19		INFO_REALIGN_3_PRIME	chr13	TogoVar
LRCH1_chr13_46548170_46749898	46573866	A A	ATATATAT others(27): Show ATATATATATATATATATATATATATATATATATT	intron_variant intron_variant	MODIFIER	NA20905.hp2 NA20905.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0003 a0001c0003t0003	a0001c0003t0003g0223 a0001c0003t0003g0223	1	90	0.0111	34	c.307 others(53): Show c.307+20164_307+20165insATATATATATATATATATATATATAT ATATATTT	LRCH1	ENSG00000136141.15	transcript	ENST00000389797.8	protein_coding	1/19		INFO_REALIGN_3_PRIME	chr13	TogoVar
LRCH1_chr13_46548170_46749898	46573866	A A	ATATATAT others(27): Show ATATATATATATATATATATATATATATATATTTT	intron_variant intron_variant	MODIFIER	HG02004.hp1 HG02004.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0021 a0001c0001t0002g0021	1	90	0.0111	34	c.307 others(53): Show c.307+20164_307+20165insATATATATATATATATATATATATAT ATATTTTT	LRCH1	ENSG00000136141.15	transcript	ENST00000389797.8	protein_coding	1/19		INFO_REALIGN_3_PRIME	chr13	TogoVar
LRCH1_chr13_46548170_46749898	46582648	C C	CTTTTTTT others(27): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00673.hp1 HG00673.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0235 a0001c0001t0001g0235	1	33	0.0303	34	c.307 others(53): Show c.307+28969_307+28970insTTTTTTTTTTTTTTTTTTTTTTTTTT TTTTTTTT	LRCH1	ENSG00000136141.15	transcript	ENST00000389797.8	protein_coding	1/19		INFO_REALIGN_3_PRIME	chr13	TogoVar
LRCH3_chr3_197786254_197893436	197792577	T T	TTATATAT others(27): Show TTATATATATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG00735.hp2 HG00738.hp1 others(21): Show HG00423.hp2 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG01106.hp2 HG01167.hp1 HG01169.hp2 HG01928.hp2 HG02027.hp1 HG02132.hp1 HG02135.hp1 HG02300.hp2 HG03688.hp1 HG04115.hp1 HG04115.hp2 NA18747.hp1 NA18941.hp1 NA19057.hp2 NA19058.hp2 NA19068.hp1 NA19068.hp2 NA19079.hp2 NA20300.hp1 NA20805.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0004 others(3): Show a0001c0001 a0001c0002 a0001c0004 a0001c0005 a0001c0011 a0002c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(10): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0001t0007 a0001c0001t0029 a0001c0002t0001 a0001c0002t0017 a0001c0002t0044 a0001c0004t0003 a0001c0005t0001 a0001c0011t0017 a0002c0003t0009 a0002c0003t0013	a0001c0001t0001g0232 a0001c0001t0001g0234 a0001c0001t0001g0240 others(21): Show a0001c0001t0001g0232 a0001c0001t0001g0234 a0001c0001t0001g0240 a0001c0001t0001g0242 a0001c0001t0001g0244 a0001c0001t0001g0246 a0001c0001t0001g0247 a0001c0001t0001g0249 a0001c0001t0002g0228 a0001c0001t0002g0230 a0001c0001t0002g0231 a0001c0001t0005g0243 a0001c0001t0005g0245 a0001c0001t0007g0227 a0001c0001t0029g0248 a0001c0002t0001g0241 a0001c0002t0001g0250 a0001c0002t0017g0238 a0001c0002t0044g0233 a0001c0004t0003g0235 a0001c0005t0001g0229 a0001c0011t0017g0237 a0002c0003t0009g0239 a0002c0003t0013g0236	24	86	0.2791	34	c.262 others(51): Show c.262+1065_262+1066insTATATATATATATATATATATATATATA TATATA	LRCH3	ENSG00000186001.14	transcript	ENST00000425562.7	protein_coding	1/20		INFO_REALIGN_3_PRIME	chr3	TogoVar
LRCH3_chr3_197786254_197893436	197817360	G G	GTATATAT others(27): Show GTATATATATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG02055.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0009 a0001c0001t0005g0009	1	24	0.0417	34	c.534 others(47): Show c.534+77_534+78insATATATATATATATATATATATATATATATAT AT	LRCH3	ENSG00000186001.14	transcript	ENST00000425562.7	protein_coding	3/20		INFO_REALIGN_3_PRIME	chr3	TogoVar
LRCH4_chr7_100569011_100591129	100574632	G G	GCGCGCGC others(27): Show GCGCGCGCACACACACACACACACACACACACACA	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02922.hp1 HG03453.hp1 NA18906.hp1 HG02922.hp1 HG03453.hp1 NA18906.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0007 a0001c0004t0007	a0001c0004t0007g0031 a0001c0004t0007g0083 a0001c0004t0007g0031 a0001c0004t0007g0083	3	348	0.0086	34	c.47 others(43): Show c.474_*475insTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCG	LRCH4	ENSG00000077454.17	transcript	ENST00000310300.11	protein_coding	18/18	474		chr7	TogoVar
LRCOL1_chr12_132598151_132615582	132598292	T T	TCCTCTCC others(27): Show TCCTCTCCGCGCGCCCCTCCTCTCCGCGCGCCCCG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03704.hp2 HG03704.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0005 a0001c0001t0001g0005	1	293	0.0034	34	c.51 others(45): Show c.5109_*5110insCGGGGCGCGCGGAGAGGAGGGGCGCGCGGAGAGG	LRCOL1	ENSG00000204583.10	transcript	ENST00000376608.9	protein_coding		4858		chr12	TogoVar
LRCOL1_chr12_132598151_132615582	132598567	G G	GCGCCCCT others(27): Show GCGCCCCTCCTCTCCGCTCGCCCCTCCTCTCCGCT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02683.hp1 HG02683.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0002 a0002c0002t0002g0002	1	384	0.0026	34	c.48 others(45): Show c.4834_*4835insAGCGGAGAGGAGGGGCGAGCGGAGAGGAGGGGCG	LRCOL1	ENSG00000204583.10	transcript	ENST00000376608.9	protein_coding		4583		chr12	TogoVar
LRCOL1_chr12_132598151_132615582	132602031	G G	GCGATTCT others(27): Show GCGATTCTGTGTGTGATGCCGCCTGTGTGAGCCTC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03516.hp1 HG03516.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0075 a0001c0001t0001g0075	1	373	0.0027	34	c.13 others(45): Show c.1370_*1371insGAGGCTCACACAGGCGGCATCACACACAGAATCG	LRCOL1	ENSG00000204583.10	transcript	ENST00000376608.9	protein_coding		1119		chr12	TogoVar
LRFN5_chr14_41601876_41909549	41610661	T T	TAAAAAAA others(27): Show TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG00735.hp2 HG01123.hp2 others(1): Show HG00558.hp1 HG00735.hp2 HG01123.hp2 HG03239.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0002g0013 others(1): Show a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0002g0013 a0001c0001t0002g0014	4	52	0.0769	34	c.-19 others(53): Show c.-197+2121_-197+2122insAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAA	LRFN5	ENSG00000165379.14	transcript	ENST00000298119.9	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr14	TogoVar
LRFN5_chr14_41601876_41909549	41734316	T T	TTATATAT others(27): Show TTATATATATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01943.hp2 HG03654.hp2 HG03688.hp2 others(5): Show HG01943.hp2 HG03654.hp2 HG03688.hp2 HG03710.hp2 HG03927.hp1 NA18942.hp2 NA18971.hp1 NA19005.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0029 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0029 a0001c0002t0002	a0001c0001t0001g0066 a0001c0001t0001g0089 a0001c0001t0001g0161 others(5): Show a0001c0001t0001g0066 a0001c0001t0001g0089 a0001c0001t0001g0161 a0001c0001t0001g0166 a0001c0001t0001g0172 a0001c0001t0002g0008 a0001c0001t0029g0120 a0001c0002t0002g0010	8	65	0.1231	34	c.-19 others(55): Show c.-196-32509_-196-32508insATATATATATATATATATATATAT ATATATATAT	LRFN5	ENSG00000165379.14	transcript	ENST00000298119.9	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr14	TogoVar
LRFN5_chr14_41601876_41909549	41734316	T T	TTATTTAT others(27): Show TTATTTATATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG02145.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0099 a0001c0001t0008g0099	1	58	0.0172	34	c.-19 others(55): Show c.-196-32535_-196-32534insTTATATATATATATATATATATAT ATATATATAT	LRFN5	ENSG00000165379.14	transcript	ENST00000298119.9	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr14	TogoVar
LRFN5_chr14_41601876_41909549	41734344	A A	ATATATAT others(27): Show ATATATATATATATATATATATATATATATATATT	intron_variant intron_variant	MODIFIER	HG00558.hp2 HG00738.hp2 HG02622.hp1 others(2): Show HG00558.hp2 HG00738.hp2 HG02622.hp1 NA19057.hp1 NA19060.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0003 a0001c0001t0007 a0001c0002t0001 others(1): Show a0001c0001t0003 a0001c0001t0007 a0001c0002t0001 a0001c0002t0003	a0001c0001t0003g0236 a0001c0001t0007g0097 a0001c0002t0001g0112 others(2): Show a0001c0001t0003g0236 a0001c0001t0007g0097 a0001c0002t0001g0112 a0001c0002t0003g0240 a0001c0002t0003g0258	5	230	0.0217	34	c.-19 others(55): Show c.-196-32509_-196-32508insATATATATATATATATATATATAT ATATATATTT	LRFN5	ENSG00000165379.14	transcript	ENST00000298119.9	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr14	TogoVar
LRGUK_chr7_134122340_134269595	134190878	A A	AAAGCAGT others(27): Show AAAGCAGTTCTGGGGATAGACAGTAGTTGAGCGGT	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG00639.hp1 HG01123.hp2 others(35): Show HG00438.hp1 HG00639.hp1 HG01123.hp2 HG01255.hp1 HG01257.hp1 HG01261.hp1 HG01515.hp1 HG01884.hp2 HG02074.hp2 HG02647.hp2 HG02698.hp1 HG02717.hp1 HG02717.hp2 HG02735.hp1 HG02895.hp1 HG02895.hp2 HG03041.hp2 HG03225.hp1 HG03704.hp1 HG04199.hp1 HG04204.hp1 HG04204.hp2 NA18906.hp1 NA18951.hp1 NA18965.hp1 NA18967.hp2 NA18983.hp1 NA18990.hp2 NA19000.hp1 NA19030.hp1 NA19067.hp1 NA19068.hp1 NA19068.hp2 NA19079.hp2 NA19084.hp2 NA19240.hp1 NA20300.hp2 NA20752.hp1	a0001 a0002 a0004 others(3): Show a0001 a0002 a0004 a0006 a0007 a0013	a0001c0001 a0001c0018 a0001c0019 others(5): Show a0001c0001 a0001c0018 a0001c0019 a0002c0002 a0004c0005 a0006c0012 a0007c0010 a0013c0022	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(8): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0006 a0001c0018t0001 a0001c0019t0001 a0002c0002t0001 a0004c0005t0004 a0006c0012t0002 a0007c0010t0001 a0013c0022t0001	a0001c0001t0001g0013 a0001c0001t0001g0023 a0001c0001t0001g0025 others(35): Show a0001c0001t0001g0013 a0001c0001t0001g0023 a0001c0001t0001g0025 a0001c0001t0001g0029 a0001c0001t0001g0103 a0001c0001t0001g0125 a0001c0001t0001g0141 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0149 a0001c0001t0001g0158 a0001c0001t0001g0162 a0001c0001t0001g0179 a0001c0001t0001g0185 a0001c0001t0001g0190 a0001c0001t0001g0192 a0001c0001t0001g0193 a0001c0001t0001g0194 a0001c0001t0001g0199 a0001c0001t0001g0203 a0001c0001t0001g0218 a0001c0001t0002g0087 a0001c0001t0002g0099 a0001c0001t0002g0145 a0001c0001t0002g0161 a0001c0001t0003g0104 a0001c0001t0003g0207 a0001c0001t0006g0170 a0001c0018t0001g0109 a0001c0019t0001g0217 a0002c0002t0001g0015 a0002c0002t0001g0052 a0002c0002t0001g0053 a0004c0005t0004g0213 a0006c0012t0002g0198 a0007c0010t0001g0031 a0007c0010t0001g0038 a0013c0022t0001g0151	38	150	0.2533	34	c.133 others(51): Show c.1335-742_1335-709dupAAGCAGTTCTGGGGATAGACAGTAGTTG AGCGGT	LRGUK	ENSG00000155530.4	transcript	ENST00000285928.3	protein_coding	11/19		INFO_REALIGN_3_PRIME	chr7	TogoVar
LRGUK_chr7_134122340_134269595	134263403	C C	CTGTGTGT others(27): Show CTGTGTGTGTGTGTGTGTCTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG00621.hp1 HG00738.hp1 others(36): Show HG00423.hp2 HG00621.hp1 HG00738.hp1 HG01192.hp1 HG01255.hp1 HG01256.hp2 HG01257.hp2 HG01346.hp2 HG01515.hp2 HG01884.hp1 HG01952.hp2 HG01993.hp1 HG02004.hp1 HG02004.hp2 HG02145.hp1 HG02148.hp2 HG02273.hp1 HG02293.hp1 HG02683.hp2 HG02698.hp2 HG02735.hp1 HG03490.hp2 HG03491.hp1 HG03834.hp1 HG04199.hp1 HG04204.hp2 NA18943.hp2 NA18964.hp1 NA18973.hp2 NA19002.hp2 NA19007.hp1 NA19009.hp1 NA19057.hp1 NA19068.hp1 NA19070.hp2 NA19074.hp2 NA19075.hp1 NA19084.hp1 NA19090.hp2	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0006 a0017	a0001c0001 a0002c0002 a0003c0004 others(2): Show a0001c0001 a0002c0002 a0003c0004 a0006c0012 a0017c0016	a0001c0001t0002 a0001c0001t0006 a0002c0002t0002 others(3): Show a0001c0001t0002 a0001c0001t0006 a0002c0002t0002 a0003c0004t0002 a0006c0012t0002 a0017c0016t0002	a0001c0001t0002g0021 a0001c0001t0002g0040 a0001c0001t0002g0077 others(36): Show a0001c0001t0002g0021 a0001c0001t0002g0040 a0001c0001t0002g0077 a0001c0001t0002g0082 a0001c0001t0002g0083 a0001c0001t0002g0087 a0001c0001t0002g0090 a0001c0001t0002g0092 a0001c0001t0002g0098 a0001c0001t0002g0099 a0001c0001t0002g0100 a0001c0001t0002g0102 a0001c0001t0002g0139 a0001c0001t0002g0161 a0001c0001t0002g0163 a0001c0001t0002g0164 a0001c0001t0002g0186 a0001c0001t0002g0187 a0001c0001t0002g0197 a0001c0001t0002g0206 a0001c0001t0002g0208 a0001c0001t0002g0209 a0001c0001t0002g0210 a0001c0001t0006g0170 a0002c0002t0002g0061 a0003c0004t0002g0088 a0003c0004t0002g0089 a0003c0004t0002g0094 a0003c0004t0002g0095 a0003c0004t0002g0096 a0003c0004t0002g0172 a0003c0004t0002g0174 a0003c0004t0002g0175 a0003c0004t0002g0176 a0003c0004t0002g0177 a0003c0004t0002g0178 a0006c0012t0002g0026 a0006c0012t0002g0198 a0017c0016t0002g0093	39	187	0.2086	34	c.234 others(51): Show c.2348-427_2348-426insGTCTGTGTGTGTGTGTGTGTGTGTGTGT GTGTGT	LRGUK	ENSG00000155530.4	transcript	ENST00000285928.3	protein_coding	19/19		INFO_REALIGN_3_PRIME	chr7	TogoVar
LRIT3_chr4_109843107_109877315	109850410	C C	CTTTCTTT others(27): Show CTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	NA21309.hp2 NA21309.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0005 a0003c0003t0005	a0003c0003t0005g0071 a0003c0003t0005g0071	1	312	0.0032	34	c.117 others(51): Show c.117-1094_117-1093insTTTCTTTCTTCTTTCTTTCTTTCTTTCT TTCTTT	LRIT3	ENSG00000183423.12	transcript	ENST00000594814.6	protein_coding	1/3			chr4	TogoVar
LRIT3_chr4_109843107_109877315	109850422	C C	CCTTCCTT others(27): Show CCTTCCTTCCTTCCTTCTTCTTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG01891.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0003 a0003c0003t0003	a0003c0003t0003g0063 a0003c0003t0003g0063	1	17	0.0588	34	c.117 others(51): Show c.117-1079_117-1078insCCTTCCTTCCTTCTTCTTTCTTTCTTTC TTTCTT	LRIT3	ENSG00000183423.12	transcript	ENST00000594814.6	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr4	TogoVar
LRIT3_chr4_109843107_109877315	109850422	C C	CCTTCTTC others(27): Show CCTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG00735.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0013 a0003c0003t0013	a0003c0003t0013g0033 a0003c0003t0013g0033	1	17	0.0588	34	c.117 others(51): Show c.117-1079_117-1078insCTTCTTTCTTTCTTTCTTTCTTTCTTTC TTTCTT	LRIT3	ENSG00000183423.12	transcript	ENST00000594814.6	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr4	TogoVar
LRMDA_chr10_75426624_76565168	75608129	T T	TATATATA others(27): Show TATATATATATATATATATATATATATATATACAC	intron_variant intron_variant	MODIFIER	HG03209.hp2 HG03209.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0007 a0001c0002t0007	a0001c0002t0007g0007 a0001c0002t0007g0007	1	39	0.0256	34	c.131 others(55): Show c.131+169636_131+169637insTATATATATATATATATATATATA TATATACACA	LRMDA	ENSG00000148655.16	transcript	ENST00000611255.5	protein_coding	2/6		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRMDA_chr10_75426624_76565168	76014110	A A	ATATATAT others(27): Show ATATATATATATATAATTATATATATATATATAAT	intron_variant intron_variant	MODIFIER	NA21309.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0009 a0001c0001t0006g0009	1	46	0.0217	34	c.132 others(53): Show c.132-21866_132-21865insATTATATATATATATAATTATATATA TATATATA	LRMDA	ENSG00000148655.16	transcript	ENST00000611255.5	protein_coding	2/6		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRP11_chr6_149813757_149869359	149859377	C C	CATATATA others(27): Show CATATATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00099.hp1 NA18970.hp2 HG00099.hp1 NA18970.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0195 a0001c0001t0001g0196 a0001c0001t0001g0195 a0001c0001t0001g0196	2	285	0.0070	34	c.613 others(51): Show c.613+4030_613+4031insATATATATATATATATATATATATATAT ATATAT	LRP11	ENSG00000120256.11	transcript	ENST00000239367.7	protein_coding	1/6			chr6	TogoVar
LRP11_chr6_149813757_149869359	149859396	A A	ATATATAT others(27): Show ATATATATATATATATATATATATATATATTTTTT	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG00558.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0160 a0001c0001t0001g0160	1	162	0.0062	34	c.613 others(51): Show c.613+4011_613+4012insAAAAAATATATATATATATATATATATA TATATA	LRP11	ENSG00000120256.11	transcript	ENST00000239367.7	protein_coding	1/6			chr6	TogoVar
LRP12_chr8_104484236_104594258	104542994	A A	AATATAAA others(27): Show AATATAAATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03486.hp1 HG03486.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0014 a0001c0002t0014	a0001c0002t0014g0018 a0001c0002t0014g0018	1	284	0.0035	34	c.80- others(51): Show c.80-11032_80-11031insATATATATATATATATATATATATATAT TTATAT	LRP12	ENSG00000147650.12	transcript	ENST00000276654.10	protein_coding	1/6			chr8	TogoVar
LRP1B_chr2_140226423_142136016	140326381	G G	GGCCAACG others(27): Show GGCCAACGGTGTTATCGGATATCTGTGTGCATGCT	intron_variant intron_variant	MODIFIER	HG02486.hp1 HG02630.hp2 HG03516.hp1 HG02486.hp1 HG02630.hp2 HG03516.hp1	a0001 a0001	a0001c0001 a0001c0015 a0001c0017 a0001c0001 a0001c0015 a0001c0017	a0001c0001t0006 a0001c0015t0009 a0001c0017t0006 a0001c0001t0006 a0001c0015t0009 a0001c0017t0006	a0001c0001t0006g0023 a0001c0015t0009g0017 a0001c0017t0006g0015 a0001c0001t0006g0023 a0001c0015t0009g0017 a0001c0017t0006g0015	3	28	0.1071	34	c.122 others(53): Show c.12224-537_12224-504dupAGCATGCACACAGATATCCGATAACA CCGTTGGC	LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding	79/90			chr2	TogoVar
LRP1B_chr2_140226423_142136016	140532929	G G	GATATATA others(27): Show GATATATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03516.hp1 HG03516.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0023 a0001c0001t0006g0023	1	28	0.0357	34	c.776 others(53): Show c.7762+1091_7762+1092insATATATATATATATATATATATATAT ATATATAT	LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding	47/90			chr2	TogoVar
LRP1B_chr2_140226423_142136016	140532947	T T	TATATATA others(27): Show TATATATATATATATATATATATATATATATACAC	intron_variant intron_variant	MODIFIER	HG01261.hp2 HG02145.hp2 HG02486.hp2 HG01261.hp2 HG02145.hp2 HG02486.hp2	a0001 a0001	a0001c0019 a0001c0024 a0001c0026 a0001c0019 a0001c0024 a0001c0026	a0001c0019t0001 a0001c0024t0005 a0001c0026t0001 a0001c0019t0001 a0001c0024t0005 a0001c0026t0001	a0001c0019t0001g0016 a0001c0024t0005g0009 a0001c0026t0001g0024 a0001c0019t0001g0016 a0001c0024t0005g0009 a0001c0026t0001g0024	3	13	0.2308	34	c.776 others(53): Show c.7762+1073_7762+1074insGTGTATATATATATATATATATATAT ATATATAT	LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding	47/90			chr2	TogoVar
LRP1B_chr2_140226423_142136016	141032826	C C	CATACATA others(27): Show CATACATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA19240.hp2 NA19240.hp2	a0001 a0001	a0001c0013 a0001c0013	a0001c0013t0002 a0001c0013t0002	a0001c0013t0002g0012 a0001c0013t0002g0012	1	19	0.0526	34	c.179 others(55): Show c.1790-12725_1790-12724insATATATATATATATATATATATAT ATATATGTAT	LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding	11/90			chr2	TogoVar
LRP1B_chr2_140226423_142136016	141103522	T T	TTCTCTCT others(27): Show TTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG01884.hp2	a0001 a0001	a0001c0016 a0001c0016	a0001c0016t0001 a0001c0016t0001	a0001c0016t0001g0011 a0001c0016t0001g0011	1	22	0.0455	34	c.101 others(55): Show c.1014-41250_1014-41249insGAGAGAGAGAGAGAGAGAGAGAGA GAGAGAGAGA	LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding	7/90			chr2	TogoVar
LRP1B_chr2_140226423_142136016	141517259	T T	TACACACA others(27): Show TACACACACACACACACACACACACACATACACAC	intron_variant intron_variant	MODIFIER	HG02922.hp2 HG02922.hp2	a0001 a0001	a0001c0008 a0001c0008	a0001c0008t0001 a0001c0008t0001	a0001c0008t0001g0008 a0001c0008t0001g0008	1	10	0.1000	34	c.206 others(53): Show c.206-36727_206-36726insGTGTGTATGTGTGTGTGTGTGTGTGT GTGTGTGT	LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding	2/90			chr2	TogoVar
LRP1B_chr2_140226423_142136016	141579724	C C	CTTTTTTT others(27): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02559.hp2 HG02559.hp2	a0001 a0001	a0001c0014 a0001c0014	a0001c0014t0004 a0001c0014t0004	a0001c0014t0004g0001 a0001c0014t0004g0001	1	8	0.1250	34	c.206 others(53): Show c.206-99192_206-99191insAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAA	LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding	2/90			chr2	TogoVar
LRP1B_chr2_140226423_142136016	141753263	C C	CATATATA others(27): Show CATATATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG01884.hp1	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0004 a0002c0004t0004	a0002c0004t0004g0006 a0002c0004t0004g0006	1	10	0.1000	34	c.205 others(53): Show c.205+57015_205+57016insATATATATATATATATATATATATAT ATATATAT	LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding	2/90			chr2	TogoVar
LRP1B_chr2_140226423_142136016	142115847	T T	TATATTAT others(27): Show TATATTATATACGTAATATATATCATATATATGTA	intron_variant intron_variant	MODIFIER	HG03225.hp2 HG03225.hp2	a0001 a0001	a0001c0018 a0001c0018	a0001c0018t0002 a0001c0018t0002	a0001c0018t0002g0013 a0001c0018t0002g0013	1	28	0.0357	34	c.82+ others(51): Show c.82+14800_82+14801insTACATATATATGATATATATTACGTATA TAATAT	LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding	1/90			chr2	TogoVar
LRP2BP_chr4_185358872_185400924	185375514	A A	ATATATAT others(27): Show ATATATATATGTATATATATATATATATATATATG	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG01891.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0031 a0001c0001t0006g0031	1	331	0.0030	34	c.330 others(47): Show c.330+98_330+99insCATATATATATATATATATATATACATATATA TA	LRP2BP	ENSG00000109771.16	transcript	ENST00000505916.6	protein_coding	4/8			chr4	TogoVar

Search by Variant

Search

Search Results