Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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Results per page.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
ZBTB10_chr8_80481226_80531265	80517871	C C	CTTTTTTT others(28): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03669.hp1 HG03669.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0033 a0001c0001t0008g0033	1	296	0.0034	35	c.196 others(52): Show c.1961-507_1961-506insTTTTTTTTTTTTTTTTTTTTTTTTTTTT TTTTTTT	ZBTB10	ENSG00000205189.13	transcript	ENST00000455036.8	protein_coding	3/5		INFO_REALIGN_3_PRIME	chr8	TogoVar
ZBTB38_chr3_141363504_141454792	141431341	A A	AAAAAAAT others(28): Show AAAAAAATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG06807.hp2 NA18906.hp1 HG06807.hp2 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0007 a0001c0001t0004 a0001c0001t0007	a0001c0001t0004g0083 a0001c0001t0007g0236 a0001c0001t0004g0083 a0001c0001t0007g0236	2	270	0.0074	35	c.1-1 others(50): Show c.1-11047_1-11046insAAAAATATATATATATATATATATATATAT ATATA	ZBTB38	ENSG00000177311.12	transcript	ENST00000321464.7	protein_coding	5/5		INFO_REALIGN_3_PRIME	chr3	TogoVar
ZBTB38_chr3_141363504_141454792	141431341	A A	AAATATAT others(28): Show AAATATATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG02886.hp1 HG00738.hp2 HG02886.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0243 a0001c0001t0005g0244 a0001c0001t0005g0243 a0001c0001t0005g0244	2	270	0.0074	35	c.1-1 others(50): Show c.1-11047_1-11046insATATATATATATATATATATATATATATAT ATATA	ZBTB38	ENSG00000177311.12	transcript	ENST00000321464.7	protein_coding	5/5		INFO_REALIGN_3_PRIME	chr3	TogoVar
ZBTB40_chr1_22446851_22536154	22474362	T T	TTGTTGCC others(28): Show TTGTTGCCTTTCAGGCCCTCGGTACAAGAGAACAGA	intron_variant intron_variant	MODIFIER	NA19078.hp2 NA19078.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0248 a0001c0001t0005g0248	1	342	0.0029	35	c.-69 others(54): Show c.-69-15517_-69-15483dupTGTTGCCTTTCAGGCCCTCGGTACAA GAGAACAGA	ZBTB40	ENSG00000184677.18	transcript	ENST00000375647.5	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr1	TogoVar
ZBTB44_chr11_130221677_130319917	130283969	C C	CAAAAAAA others(28): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA18979.hp1 NA19010.hp2 NA18979.hp1 NA19010.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0013 a0001c0001t0002 a0001c0001t0013	a0001c0001t0002g0037 a0001c0001t0013g0263 a0001c0001t0002g0037 a0001c0001t0013g0263	2	290	0.0069	35	c.-56 others(54): Show c.-56-22041_-56-22040insTTTTTTTTTTTTTTTTTTTTTTTTTT TTTTTTTTT	ZBTB44	ENSG00000196323.14	transcript	ENST00000357899.9	protein_coding	1/7			chr11	TogoVar
ZBTB46_chr20_63738670_63836264	63747466	C C	CAGGGGGT others(28): Show CAGGGGGTGAGCAGGGCCCGGTGGAGGTTGGGAGGG	intron_variant intron_variant	MODIFIER	HG01978.hp1 HG01978.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0122 a0001c0002t0001g0122	1	316	0.0032	35	c.139 others(52): Show c.1399-166_1399-165insCCCTCCCAACCTCCACCGGGCCCTGCTC ACCCCCT	ZBTB46	ENSG00000130584.12	transcript	ENST00000245663.9	protein_coding	4/4			chr20	TogoVar
ZBTB7A_chr19_4038303_4071899	4070440	C C	CGCTTTTT others(28): Show CGCTTTTTTCTTTTGTTTTCTTTTTTTTTTCCTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG04184.hp2 HG04184.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0153 a0001c0001t0153	a0001c0001t0153g0118 a0001c0001t0153g0118	1	276	0.0036	35	c.-37 others(46): Show c.-3775_-3774insAAAAGGAAAAAAAAAAGAAAACAAAAGAAAAAAG C	ZBTB7A	ENSG00000178951.9	transcript	ENST00000322357.9	protein_coding		3542		chr19	TogoVar
ZC3H11B_chr1_219603012_219618105	219607738	C C	CTTTTTTT others(28): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00738.hp1 HG00741.hp1 HG01109.hp2 others(17): Show HG00738.hp1 HG00741.hp1 HG01109.hp2 HG01123.hp2 HG01978.hp2 HG02300.hp2 HG02559.hp1 HG02698.hp1 HG03492.hp2 HG04204.hp2 NA18971.hp2 NA18985.hp1 NA18998.hp1 NA19006.hp2 NA19066.hp1 NA19068.hp2 NA19074.hp1 NA19080.hp1 NA19082.hp1 NA20805.hp1	a0001 a0012 a0001 a0012	a0001c0001 a0012c0024 a0001c0001 a0012c0024	a0001c0001t0002 a0012c0024t0002 a0001c0001t0002 a0012c0024t0002	a0001c0001t0002g0002 a0012c0024t0002g0023 a0001c0001t0002g0002 a0012c0024t0002g0023	20	448	0.0446	35	c.19 others(46): Show c.1906_*1907insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA A	ZC3H11B	ENSG00000215817.9	transcript	ENST00000651890.2	protein_coding		273		chr1	TogoVar
ZC3H12B_chrX_65029826_65512887	65373907	A A	ATATATAT others(28): Show ATATATATACTATATATATAGTATATATATATATAG	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG02615.hp2 HG02109.hp2 HG02615.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0159 a0001c0001t0002g0160 a0001c0001t0002g0159 a0001c0001t0002g0160	2	165	0.0121	35	c.-26 others(54): Show c.-269+4909_-269+4910insTATATATACTATATATATAGTATATA TATATATAG	ZC3H12B	ENSG00000102053.13	transcript	ENST00000338957.5	protein_coding	4/9			chrX	TogoVar
ZC3H12B_chrX_65029826_65512887	65373907	A A	ATATATAT others(28): Show ATATATATATACTATATATATAGTATATATATATAG	intron_variant intron_variant	MODIFIER	HG01167.hp1 HG01169.hp2 HG02572.hp1 HG01167.hp1 HG01169.hp2 HG02572.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0017 a0001c0001t0002 a0001c0001t0017	a0001c0001t0002g0156 a0001c0001t0002g0161 a0001c0001t0017g0127 a0001c0001t0002g0156 a0001c0001t0002g0161 a0001c0001t0017g0127	3	165	0.0182	35	c.-26 others(54): Show c.-269+4909_-269+4910insTATATATATACTATATATATAGTATA TATATATAG	ZC3H12B	ENSG00000102053.13	transcript	ENST00000338957.5	protein_coding	4/9			chrX	TogoVar
ZC3H13_chr13_45949465_46057746	45983413	A A	ATATATAT others(28): Show ATATATATATATATATATATATATATATATATATTT	intron_variant intron_variant	MODIFIER	HG02572.hp2 HG02572.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0153 a0001c0001t0004g0153	1	324	0.0031	35	c.172 others(54): Show c.1720+1883_1720+1884insAAATATATATATATATATATATATAT ATATATATA	ZC3H13	ENSG00000123200.17	transcript	ENST00000679008.1	protein_coding	10/18			chr13	TogoVar
ZC3H13_chr13_45949465_46057746	45983413	A A	ATATATAT others(28): Show ATATATATATATATATATATATATATATATATTTTT	intron_variant intron_variant	MODIFIER	HG03453.hp2 HG03453.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0190 a0001c0001t0001g0190	1	324	0.0031	35	c.172 others(54): Show c.1720+1883_1720+1884insAAAAATATATATATATATATATATAT ATATATATA	ZC3H13	ENSG00000123200.17	transcript	ENST00000679008.1	protein_coding	10/18			chr13	TogoVar
ZC3H13_chr13_45949465_46057746	45983414	T T	TATATATA others(28): Show TATATATATATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG00423.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0198 a0001c0001t0001g0198	1	324	0.0031	35	c.172 others(54): Show c.1720+1882_1720+1883insTATATATATATATATATATATATATA TATATATAT	ZC3H13	ENSG00000123200.17	transcript	ENST00000679008.1	protein_coding	10/18			chr13	TogoVar
ZC3H3_chr8_143432659_143546447	143492987	C C	CTCCCGTG others(28): Show CTCCCGTGTCCTGGCCCAGGGGCTCCCTCCTCAGGG	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00280.hp1 HG00735.hp1 others(56): Show HG00140.hp2 HG00280.hp1 HG00735.hp1 HG01074.hp1 HG01192.hp2 HG01261.hp1 HG01361.hp1 HG01516.hp2 HG01891.hp1 HG02040.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02132.hp1 HG02145.hp2 HG02155.hp1 HG02165.hp2 HG02300.hp1 HG02572.hp2 HG02630.hp2 HG02683.hp1 HG02723.hp1 HG02723.hp2 HG02886.hp2 HG02922.hp2 HG02965.hp2 HG03017.hp2 HG03195.hp1 HG03516.hp1 HG03688.hp2 HG03710.hp2 HG03831.hp1 HG03834.hp1 HG04115.hp2 HG04228.hp2 HG06807.hp2 NA18522.hp2 NA18946.hp2 NA18953.hp1 NA18959.hp2 NA18960.hp2 NA18963.hp2 NA18966.hp1 NA18969.hp2 NA18981.hp1 NA18982.hp1 NA18984.hp1 NA18989.hp2 NA18991.hp2 NA18994.hp1 NA19005.hp1 NA19009.hp1 NA19070.hp2 NA19079.hp1 NA19080.hp2 NA19088.hp2 NA20129.hp1 NA20752.hp1 NA20805.hp1	a0002 a0007 a0008 others(5): Show a0002 a0007 a0008 a0009 a0012 a0014 a0039 a0040	a0002c0002 a0002c0054 a0007c0009 others(7): Show a0002c0002 a0002c0054 a0007c0009 a0008c0007 a0009c0013 a0009c0014 a0012c0012 a0014c0017 a0039c0053 a0040c0052	a0002c0002t0001 a0002c0002t0002 a0002c0054t0001 others(8): Show a0002c0002t0001 a0002c0002t0002 a0002c0054t0001 a0007c0009t0001 a0008c0007t0001 a0009c0013t0001 a0009c0014t0001 a0012c0012t0002 a0014c0017t0003 a0039c0053t0001 a0040c0052t0001	a0002c0002t0001g0004 a0002c0002t0001g0288 a0002c0002t0001g0289 others(55): Show a0002c0002t0001g0004 a0002c0002t0001g0288 a0002c0002t0001g0289 a0002c0002t0001g0290 a0002c0002t0001g0292 a0002c0002t0001g0295 a0002c0002t0001g0296 a0002c0002t0001g0299 a0002c0002t0001g0301 a0002c0002t0001g0302 a0002c0002t0001g0305 a0002c0002t0001g0306 a0002c0002t0001g0307 a0002c0002t0001g0309 a0002c0002t0001g0312 a0002c0002t0001g0313 a0002c0002t0001g0319 a0002c0002t0001g0322 a0002c0002t0001g0323 a0002c0002t0001g0324 a0002c0002t0001g0326 a0002c0002t0001g0327 a0002c0002t0001g0328 a0002c0002t0001g0329 a0002c0002t0001g0333 a0002c0002t0001g0335 a0002c0002t0001g0337 a0002c0002t0001g0338 a0002c0002t0001g0339 a0002c0002t0001g0340 a0002c0002t0001g0341 a0002c0002t0001g0343 a0002c0002t0001g0346 a0002c0002t0002g0293 a0002c0002t0002g0304 a0002c0002t0002g0308 a0002c0054t0001g0344 a0007c0009t0001g0232 a0007c0009t0001g0238 a0007c0009t0001g0240 a0007c0009t0001g0241 a0007c0009t0001g0242 a0008c0007t0001g0150 a0008c0007t0001g0151 a0009c0013t0001g0178 a0009c0013t0001g0179 a0009c0013t0001g0180 a0009c0013t0001g0181 a0009c0013t0001g0182 a0009c0014t0001g0183 a0009c0014t0001g0184 a0012c0012t0002g0311 a0012c0012t0002g0345 a0014c0017t0003g0234 a0014c0017t0003g0235 a0014c0017t0003g0236 a0039c0053t0001g0310 a0040c0052t0001g0287	59	352	0.1676	35	c.171 others(56): Show c.1715+14758_1715+14759insCCCTGAGGAGGGAGCCCCTGGGCC AGGACACGGGA	ZC3H3	ENSG00000014164.7	transcript	ENST00000262577.6	protein_coding	4/11			chr8	TogoVar
ZC3H3_chr8_143432659_143546447	143493022	C C	CTCCCGTG others(28): Show CTCCCGTGTCCTGGCCCAGGGGCTCCCTCCTCAGGG	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG02895.hp2 HG03579.hp2 HG02055.hp2 HG02895.hp2 HG03579.hp2	a0011 a0011	a0011c0011 a0011c0011	a0011c0011t0001 a0011c0011t0001	a0011c0011t0001g0243 a0011c0011t0001g0244 a0011c0011t0001g0248 a0011c0011t0001g0243 a0011c0011t0001g0244 a0011c0011t0001g0248	3	352	0.0085	35	c.171 others(56): Show c.1715+14689_1715+14723dupCCCTGAGGAGGGAGCCCCTGGGCC AGGACACGGGA	ZC3H3	ENSG00000014164.7	transcript	ENST00000262577.6	protein_coding	4/11			chr8	TogoVar
ZC3HAV1_chr7_139038515_139114720	139097428	A A	ATATATAT others(28): Show ATATATATATATATATATATATTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02647.hp1 HG02647.hp1	a0012 a0012	a0012c0036 a0012c0036	a0012c0036t0040 a0012c0036t0040	a0012c0036t0040g0042 a0012c0036t0040g0042	1	314	0.0032	35	c.309 others(52): Show c.309-7670_309-7669insAAAAAAAAAAAAAAATATATATATATAT ATATATA	ZC3HAV1	ENSG00000105939.14	transcript	ENST00000242351.10	protein_coding	1/12			chr7	TogoVar
ZC3HAV1_chr7_139038515_139114720	139097428	A A	ATATATAT others(28): Show ATATATATATATATATATATTTTTTTTTTTTATTTT	intron_variant intron_variant	MODIFIER	HG03130.hp1 HG03130.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0310 a0001c0002t0002g0310	1	314	0.0032	35	c.309 others(52): Show c.309-7670_309-7669insAAAATAAAAAAAAAAAATATATATATAT ATATATA	ZC3HAV1	ENSG00000105939.14	transcript	ENST00000242351.10	protein_coding	1/12			chr7	TogoVar
ZC3HAV1_chr7_139038515_139114720	139097428	A A	ATATATAT others(28): Show ATATATATATATATATATATTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02071.hp1 HG03017.hp2 HG03704.hp2 HG02071.hp1 HG03017.hp2 HG03704.hp2	a0001 a0002 a0007 a0001 a0002 a0007	a0001c0017 a0002c0001 a0007c0006 a0001c0017 a0002c0001 a0007c0006	a0001c0017t0008 a0002c0001t0006 a0007c0006t0007 a0001c0017t0008 a0002c0001t0006 a0007c0006t0007	a0001c0017t0008g0009 a0002c0001t0006g0008 a0007c0006t0007g0086 a0001c0017t0008g0009 a0002c0001t0006g0008 a0007c0006t0007g0086	3	314	0.0096	35	c.309 others(52): Show c.309-7670_309-7669insAAAAAAAAAAAAAAAAATATATATATAT ATATATA	ZC3HAV1	ENSG00000105939.14	transcript	ENST00000242351.10	protein_coding	1/12			chr7	TogoVar
ZC3HAV1_chr7_139038515_139114720	139097428	A A	ATATATAT others(28): Show ATATATATATATATTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18986.hp1 NA18986.hp1	a0001 a0001	a0001c0008 a0001c0008	a0001c0008t0038 a0001c0008t0038	a0001c0008t0038g0051 a0001c0008t0038g0051	1	314	0.0032	35	c.309 others(52): Show c.309-7670_309-7669insAAAAAAAAAAAAAAAAAAAAAAATATAT ATATATA	ZC3HAV1	ENSG00000105939.14	transcript	ENST00000242351.10	protein_coding	1/12			chr7	TogoVar
ZC3HAV1_chr7_139038515_139114720	139097428	A A	ATATATAT others(28): Show ATATATATATATTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18962.hp1 NA18962.hp1	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0006 a0002c0001t0006	a0002c0001t0006g0048 a0002c0001t0006g0048	1	314	0.0032	35	c.309 others(52): Show c.309-7670_309-7669insAAAAAAAAAAAAAAAAAAAAAAAAATAT ATATATA	ZC3HAV1	ENSG00000105939.14	transcript	ENST00000242351.10	protein_coding	1/12			chr7	TogoVar
ZC3HAV1_chr7_139038515_139114720	139097429	T T	TATATATA others(28): Show TATATATATATATATATATATATATATTTTATTTTA	intron_variant intron_variant	MODIFIER	HG02615.hp2 HG02615.hp2	a0013 a0013	a0013c0035 a0013c0035	a0013c0035t0014 a0013c0035t0014	a0013c0035t0014g0101 a0013c0035t0014g0101	1	314	0.0032	35	c.309 others(52): Show c.309-7671_309-7670insTAAAATAAAATATATATATATATATATA TATATAT	ZC3HAV1	ENSG00000105939.14	transcript	ENST00000242351.10	protein_coding	1/12			chr7	TogoVar
ZCCHC10_chr5_132991985_133031549	133010946	C C	CTGTAAGT others(28): Show CTGTAAGTTTTTGTATTTTTAGTACAAAATACAAAA	intron_variant intron_variant	MODIFIER	HG01516.hp2 HG01516.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0078 a0001c0001t0002g0078	1	312	0.0032	35	c.108 others(52): Show c.108-4027_108-4026insTTTTGTATTTTGTACTAAAAATACAAAA ACTTACA	ZCCHC10	ENSG00000155329.12	transcript	ENST00000509437.6	protein_coding	2/4			chr5	TogoVar
ZCCHC2_chr18_62518025_62583579	62567944	C C	CAAAAAAA others(28): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02738.hp2 HG02738.hp2	a0002 a0002	a0002c0009 a0002c0009	a0002c0009t0004 a0002c0009t0004	a0002c0009t0004g0298 a0002c0009t0004g0298	1	312	0.0032	35	c.184 others(54): Show c.1847-2144_1847-2143insAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAA	ZCCHC2	ENSG00000141664.10	transcript	ENST00000269499.10	protein_coding	11/13		INFO_REALIGN_3_PRIME	chr18	TogoVar
ZCCHC7_chr9_37115574_37363149	37132538	G G	GTGTATAC others(28): Show GTGTATACACATCATGTGTGCACATGTGTGTATGCA	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02451.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0004 a0002c0002t0004	a0002c0002t0004g0165 a0002c0002t0004g0165	1	282	0.0036	35	c.610 others(52): Show c.610+5608_610+5642dupCATGTGTGCACATGTGTGTATGCATGTA TACACAT	ZCCHC7	ENSG00000147905.18	transcript	ENST00000336755.10	protein_coding	2/8		INFO_REALIGN_3_PRIME	chr9	TogoVar
ZER1_chr9_128724786_128776927	128734140	A A	ATATATAT others(28): Show ATATATATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18961.hp1 NA18961.hp2 NA18961.hp1 NA18961.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0002 a0001c0001t0001 a0001c0002t0002	a0001c0001t0001g0252 a0001c0002t0002g0138 a0001c0001t0001g0252 a0001c0002t0002g0138	2	330	0.0061	35	c.214 others(52): Show c.2141-613_2141-612insATATATATATATATATATATATATATAT ATATATA	ZER1	ENSG00000160445.11	transcript	ENST00000291900.7	protein_coding	14/15			chr9	TogoVar
ZER1_chr9_128724786_128776927	128734144	A A	AAAAATAT others(28): Show AAAAATATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA19007.hp2 NA19007.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0183 a0001c0001t0001g0183	1	330	0.0030	35	c.214 others(52): Show c.2141-617_2141-616insATATATATATATATATATATATATATAT ATATTTT	ZER1	ENSG00000160445.11	transcript	ENST00000291900.7	protein_coding	14/15			chr9	TogoVar
ZER1_chr9_128724786_128776927	128734144	A A	AAATATAT others(28): Show AAATATATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03669.hp2 HG03669.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0074 a0001c0002t0002g0074	1	330	0.0030	35	c.214 others(52): Show c.2141-617_2141-616insATATATATATATATATATATATATATAT ATATATT	ZER1	ENSG00000160445.11	transcript	ENST00000291900.7	protein_coding	14/15			chr9	TogoVar
ZER1_chr9_128724786_128776927	128734144	A A	ATATATAT others(28): Show ATATATATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00597.hp1 HG01975.hp2 NA18972.hp2 HG00597.hp1 HG01975.hp2 NA18972.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0005 a0001c0002t0002 a0001c0001t0001 a0001c0001t0005 a0001c0002t0002	a0001c0001t0001g0227 a0001c0001t0005g0269 a0001c0002t0002g0303 a0001c0001t0001g0227 a0001c0001t0005g0269 a0001c0002t0002g0303	3	330	0.0091	35	c.214 others(52): Show c.2141-617_2141-616insATATATATATATATATATATATATATAT ATATATA	ZER1	ENSG00000160445.11	transcript	ENST00000291900.7	protein_coding	14/15			chr9	TogoVar
ZFAND2A_chr7_1147907_1165196	1151762	T T	TAAAAAAA others(28): Show TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	NA20805.hp1 NA20805.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0004 a0001c0002t0004	a0001c0002t0004g0100 a0001c0002t0004g0100	1	432	0.0023	35	c.13 others(46): Show c.1306_*1307insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT T	ZFAND2A	ENSG00000178381.12	transcript	ENST00000316495.8	protein_coding		1144		chr7	TogoVar
ZFAND3_chr6_37814727_38159624	38048621	C C	CAAAAAAA others(28): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG02895.hp2 NA18983.hp1 HG00735.hp2 HG02895.hp2 NA18983.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0011 a0001c0001t0001 a0001c0001t0011	a0001c0001t0001g0036 a0001c0001t0001g0164 a0001c0001t0011g0150 a0001c0001t0001g0036 a0001c0001t0001g0164 a0001c0001t0011g0150	3	318	0.0094	35	c.113 others(54): Show c.113-12959_113-12958insAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAA	ZFAND3	ENSG00000156639.12	transcript	ENST00000287218.9	protein_coding	2/5		INFO_REALIGN_3_PRIME	chr6	TogoVar
ZFAND3_chr6_37814727_38159624	38144184	A A	ATATATAT others(28): Show ATATATATATTATATATATATATATAATATATATAT	intron_variant intron_variant	MODIFIER	NA18947.hp1 NA18947.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0020 a0001c0001t0001g0020	1	318	0.0031	35	c.530 others(52): Show c.530-8051_530-8050insTATATATATTATATATATATATATAATA TATATAT	ZFAND3	ENSG00000156639.12	transcript	ENST00000287218.9	protein_coding	5/5			chr6	TogoVar
ZFHX3_chr16_72777885_73053128	73004159	C C	CTTTTTTT others(28): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02148.hp2 HG02148.hp2	a0044 a0044	a0044c0053 a0044c0053	a0044c0053t0003 a0044c0053t0003	a0044c0053t0003g0023 a0044c0053t0003g0023	1	254	0.0039	35	c.-50 others(54): Show c.-50+43592_-50+43593insAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAA	ZFHX3	ENSG00000140836.17	transcript	ENST00000268489.10	protein_coding	1/9			chr16	TogoVar
ZFP1_chr16_75143524_75177234	75161774	A A	ATATATAT others(28): Show ATATATATATATATATATATATATATATATATTTTT	intron_variant intron_variant	MODIFIER	HG03471.hp1 HG03471.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0009	a0001c0001t0009g0059 a0001c0001t0009g0059	1	364	0.0028	35	c.16- others(50): Show c.16-4995_16-4994insATATATATATATATATATATATATATATAT TTTTT	ZFP1	ENSG00000184517.12	transcript	ENST00000570010.6	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr16	TogoVar
ZFP1_chr16_75143524_75177234	75161774	A A	ATATATAT others(28): Show ATATATATATATATATATATATATATTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03490.hp2 HG03490.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0196 a0001c0001t0001g0196	1	364	0.0028	35	c.16- others(50): Show c.16-4995_16-4994insATATATATATATATATATATATATTTTTTT TTTTT	ZFP1	ENSG00000184517.12	transcript	ENST00000570010.6	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr16	TogoVar
ZFTRAF1_chr8_144444582_144467871	144463094	T T	TGTGGCGC others(28): Show TGTGGCGCCGGCGCGGCACCCACGCTCCACGAGCCA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0124 a0001c0001t0001g0124	1	446	0.0022	35	c.-44 others(44): Show c.-441_-440insTGGCTCGTGGAGCGTGGGTGCCGCGCCGGCGCCAC	ZFTRAF1	ENSG00000187954.14	transcript	ENST00000530374.6	protein_coding		224		chr8	TogoVar
ZFX_chrX_24144729_24221255	24178325	G G	GTCGCCCA others(28): Show GTCGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGGC	intron_variant intron_variant	MODIFIER	HG02922.hp2 HG03579.hp1 HG02922.hp2 HG03579.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0013 a0001c0001 a0002c0013	a0001c0001t0005 a0002c0013t0028 a0001c0001t0005 a0002c0013t0028	a0001c0001t0005g0164 a0002c0013t0028g0163 a0001c0001t0005g0164 a0002c0013t0028g0163	2	295	0.0068	35	c.59- others(48): Show c.59-855_59-821dupGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGG CTC	ZFX	ENSG00000005889.16	transcript	ENST00000304543.10	protein_coding	4/9		INFO_REALIGN_3_PRIME	chrX	TogoVar
ZFYVE26_chr14_67741522_67821590	67816939	G G	GTTGTTGA others(28): Show GTTGTTGATTGTTAGTGTTCTAGCCTTTTGATGGTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp1 HG00099.hp1	a0016 a0016	a0016c0023 a0016c0023	a0016c0023t0001 a0016c0023t0001	a0016c0023t0001g0217 a0016c0023t0001g0217	1	290	0.0035	35	c.-49 others(44): Show c.-490_-489insAACCATCAAAAGGCTAGAACACTAACAATCAACAA	ZFYVE26	ENSG00000072121.17	transcript	ENST00000347230.9	protein_coding		350		chr14	TogoVar
ZFYVE26_chr14_67741522_67821590	67818085	G G	GTTTTTTT others(28): Show GTTTTTTTTTTTTGTTTGTTTTTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02145.hp2 HG02145.hp2	a0030 a0030	a0030c0047 a0030c0047	a0030c0047t0010 a0030c0047t0010	a0030c0047t0010g0214 a0030c0047t0010g0214	1	290	0.0035	35	c.-16 others(46): Show c.-1636_-1635insAAAAAAAAAAAAAAAAAACAAACAAAAAAAAAAA A	ZFYVE26	ENSG00000072121.17	transcript	ENST00000347230.9	protein_coding		1496		chr14	TogoVar
ZIM3_chr19_57129096_57150202	57146492	A A	ATATATAT others(28): Show ATATATATATATATATATATATTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02015.hp1 NA18982.hp2 HG02015.hp1 NA18982.hp2	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0002 a0004c0004t0002	a0004c0004t0002g0002 a0004c0004t0002g0002	2	418	0.0048	35	c.-16 others(46): Show c.-1677_-1676insAAAAAAAAAAAAAAATATATATATATATATATAT A	ZIM3	ENSG00000141946.1	transcript	ENST00000269834.1	protein_coding		1291		chr19	TogoVar
ZIM3_chr19_57129096_57150202	57146492	A A	ATATATAT others(28): Show ATATATATATATATATATATTTTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02602.hp2 HG02602.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0003 a0002c0002t0002g0003	1	418	0.0024	35	c.-16 others(46): Show c.-1677_-1676insAAAAAAAAAAAAAAAAATATATATATATATATAT A	ZIM3	ENSG00000141946.1	transcript	ENST00000269834.1	protein_coding		1291		chr19	TogoVar
ZIM3_chr19_57129096_57150202	57146492	A A	ATATATAT others(28): Show ATATATATATATATATATTTTTTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01361.hp2 HG01361.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0019 a0001c0001t0005g0019	1	418	0.0024	35	c.-16 others(46): Show c.-1677_-1676insAAAAAAAAAAAAAAAAAAATATATATATATATAT A	ZIM3	ENSG00000141946.1	transcript	ENST00000269834.1	protein_coding		1291		chr19	TogoVar
ZIM3_chr19_57129096_57150202	57146492	A A	ATATATAT others(28): Show ATATATATATATTTTTTTTTTTTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02273.hp2 NA20805.hp2 HG02273.hp2 NA20805.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0005 a0002c0002t0002 a0001c0001t0005 a0002c0002t0002	a0001c0001t0005g0019 a0002c0002t0002g0011 a0001c0001t0005g0019 a0002c0002t0002g0011	2	418	0.0048	35	c.-16 others(46): Show c.-1677_-1676insAAAAAAAAAAAAAAAAAAAAAAAAATATATATAT A	ZIM3	ENSG00000141946.1	transcript	ENST00000269834.1	protein_coding		1291		chr19	TogoVar
ZIM3_chr19_57129096_57150202	57146492	A A	ATATATAT others(28): Show ATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02080.hp2 HG02080.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0093 a0002c0002t0002g0093	1	418	0.0024	35	c.-16 others(46): Show c.-1677_-1676insAAAAAAAAAAAAAAAAAAAAAAAAAAATATATAT A	ZIM3	ENSG00000141946.1	transcript	ENST00000269834.1	protein_coding		1291		chr19	TogoVar
ZMAT3_chr3_179012223_179076809	179023710	A A	ATATATAT others(28): Show ATATATATATATATATATATATATATATATATATAT	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02572.hp2 HG02572.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0078 a0001c0001t0078	a0001c0001t0078g0093 a0001c0001t0078g0093	1	350	0.0029	35	c.13 others(46): Show c.1306_*1307insATATATATATATATATATATATATATATATATAT A	ZMAT3	ENSG00000172667.11	transcript	ENST00000311417.7	protein_coding	6/6	1306		chr3	TogoVar
ZMAT3_chr3_179012223_179076809	179023710	A A	ATATATAT others(28): Show ATATATATATATATATATATATATATATATATTTTT	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02486.hp2 HG02486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0162 a0001c0001t0162	a0001c0001t0162g0176 a0001c0001t0162g0176	1	350	0.0029	35	c.13 others(46): Show c.1306_*1307insAAAAATATATATATATATATATATATATATATAT A	ZMAT3	ENSG00000172667.11	transcript	ENST00000311417.7	protein_coding	6/6	1306		chr3	TogoVar
ZMAT3_chr3_179012223_179076809	179023710	A A	ATATATAT others(28): Show ATATATATATATATATATATATATATATATTTTTTT	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02055.hp1 HG02055.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0066 a0001c0001t0066	a0001c0001t0066g0298 a0001c0001t0066g0298	1	350	0.0029	35	c.13 others(46): Show c.1306_*1307insAAAAAAATATATATATATATATATATATATATAT A	ZMAT3	ENSG00000172667.11	transcript	ENST00000311417.7	protein_coding	6/6	1306		chr3	TogoVar
ZMAT3_chr3_179012223_179076809	179023710	A A	ATATATAT others(28): Show ATATATATATATATATATATATATATATTTTTTTTT	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG03831.hp1 HG03831.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0112 a0001c0001t0112	a0001c0001t0112g0225 a0001c0001t0112g0225	1	350	0.0029	35	c.13 others(46): Show c.1306_*1307insAAAAAAAAATATATATATATATATATATATATAT A	ZMAT3	ENSG00000172667.11	transcript	ENST00000311417.7	protein_coding	6/6	1306		chr3	TogoVar
ZMAT3_chr3_179012223_179076809	179023710	A A	ATATATAT others(28): Show ATATATATATATATATATATATATTTTTTTTTTTTT	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01081.hp2 HG01081.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0096 a0001c0001t0096	a0001c0001t0096g0211 a0001c0001t0096g0211	1	350	0.0029	35	c.13 others(46): Show c.1306_*1307insAAAAAAAAAAAAATATATATATATATATATATAT A	ZMAT3	ENSG00000172667.11	transcript	ENST00000311417.7	protein_coding	6/6	1306		chr3	TogoVar
ZMAT3_chr3_179012223_179076809	179023711	T T	TATATATA others(28): Show TATATATATATATATATATATATATATATATATATA	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02818.hp2 HG02818.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0209 a0001c0001t0209	a0001c0001t0209g0149 a0001c0001t0209g0149	1	350	0.0029	35	c.13 others(46): Show c.1305_*1306insTATATATATATATATATATATATATATATATATA T	ZMAT3	ENSG00000172667.11	transcript	ENST00000311417.7	protein_coding	6/6	1305		chr3	TogoVar
ZMAT4_chr8_40525590_40902826	40589731	C C	CCTTTTTT others(28): Show CCTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG00738.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0003 a0002c0002t0003	a0002c0002t0003g0186 a0002c0002t0003g0186	1	228	0.0044	35	c.578 others(52): Show c.578-8471_578-8470insAAAGAAAGAAAGAAAGAAAGAAAGAAAG AAAAAAG	ZMAT4	ENSG00000165061.15	transcript	ENST00000297737.11	protein_coding	5/6			chr8	TogoVar

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