regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SLC7A7_chr14_22768222_22820435 | 22812773 | C | CTATATAT others(29): Show |
intron_variant | MODIFIER | HG02723.hp2 HG02970.hp2 |
a0001 | a0001c0005 | a0001c0005t0002 | a0001c0005t0002g0365a0001c0005t0002g0366 | 2 | 402 | 0.0050 | 36 | c.499 others(51): Show |
SLC7A7 | ENSG00000155465.21 | transcript | ENST00000674313.1 | protein_coding | 2/9 | chr14 | TogoVar | ||||||
SLC7A9_chr19_32825511_32874767 | 32872546 | C | CTATATAA others(29): Show |
upstream_gene_variant | MODIFIER | NA18961.hp1 | a0001 | a0001c0021 | a0001c0021t0004 | a0001c0021t0004g0215 | 1 | 404 | 0.0025 | 36 | c.-29 others(47): Show |
SLC7A9 | ENSG00000021488.13 | transcript | ENST00000023064.9 | protein_coding | 2780 | chr19 | TogoVar | ||||||
SLC8A1_chr2_40092270_40457090 | 40288834 | C | CATATATA others(29): Show |
intron_variant | MODIFIER | HG03130.hp2 | a0001 | a0001c0001 | a0001c0001t0100 | a0001c0001t0100g0236 | 1 | 236 | 0.0042 | 36 | c.180 others(59): Show |
SLC8A1 | ENSG00000183023.19 | transcript | ENST00000332839.9 | protein_coding | 2/10 | chr2 | TogoVar | ||||||
SLC8A3_chr14_70039215_70193951 | 70192023 | A | ATTAATAA others(29): Show |
upstream_gene_variant | MODIFIER | NA18973.hp2 NA19003.hp1 NA19056.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0005a0001c0001t0007 | a0001c0001t0002g0071a0001c0001t0002g0201a0001c0001t0005g0045others(2): Show | 5 | 296 | 0.0169 | 36 | c.-37 others(47): Show |
SLC8A3 | ENSG00000100678.20 | transcript | ENST00000356921.7 | protein_coding | 3073 | chr14 | TogoVar | ||||||
SLC8A3_chr14_70039215_70193951 | 70192023 | A | ATTAATAA others(29): Show |
upstream_gene_variant | MODIFIER | NA18948.hp1 | a0001 | a0001c0001 | a0001c0001t0045 | a0001c0001t0045g0069 | 1 | 296 | 0.0034 | 36 | c.-37 others(47): Show |
SLC8A3 | ENSG00000100678.20 | transcript | ENST00000356921.7 | protein_coding | 3073 | chr14 | TogoVar | ||||||
SLC9A3_chr5_465456_529449 | 473144 | C | CGGCCCCG others(29): Show |
3_prime_UTR_variant | MODIFIER | HG01192.hp2 HG01943.hp1 HG01943.hp2 others(15): Show |
a0001a0010 | a0001c0001a0001c0020a0001c0021others(3): Show | a0001c0001t0004a0001c0001t0017a0001c0001t0027others(5): Show | a0001c0001t0004g0010a0001c0001t0004g0013a0001c0001t0004g0027others(15): Show | 18 | 218 | 0.0826 | 36 | c.*23 others(45): Show |
SLC9A3 | ENSG00000066230.12 | transcript | ENST00000264938.8 | protein_coding | 17/17 | 234 | chr5 | TogoVar | |||||
SLC9A3_chr5_465456_529449 | 495540 | T | TCCCCACG others(29): Show |
intron_variant | MODIFIER | HG03710.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0012 | 1 | 218 | 0.0046 | 36 | c.212 others(53): Show |
SLC9A3 | ENSG00000066230.12 | transcript | ENST00000264938.8 | protein_coding | 1/16 | chr5 | TogoVar | ||||||
SLC9A3_chr5_465456_529449 | 495715 | T | TCCCCACG others(29): Show |
intron_variant | MODIFIER | HG01261.hp1 | a0001 | a0001c0026 | a0001c0026t0012 | a0001c0026t0012g0212 | 1 | 218 | 0.0046 | 36 | c.212 others(53): Show |
SLC9A3 | ENSG00000066230.12 | transcript | ENST00000264938.8 | protein_coding | 1/16 | chr5 | TogoVar | ||||||
SLC9A4_chr2_102468226_102538972 | 102510272 | C | CAGATACA others(29): Show |
intron_variant | MODIFIER | HG02922.hp2 NA19007.hp1 |
a0001 | a0001c0002 | a0001c0002t0001a0001c0002t0003 | a0001c0002t0001g0222a0001c0002t0003g0115 | 2 | 382 | 0.0052 | 36 | c.148 others(55): Show |
SLC9A4 | ENSG00000180251.5 | transcript | ENST00000295269.5 | protein_coding | 6/11 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
SLC9A4_chr2_102468226_102538972 | 102510272 | C | CAGATACA others(29): Show |
intron_variant | MODIFIER | HG01943.hp1 HG02165.hp1 HG02970.hp2 others(4): Show |
a0001 | a0001c0002 | a0001c0002t0001a0001c0002t0007 | a0001c0002t0001g0020a0001c0002t0001g0221a0001c0002t0001g0237others(3): Show | 7 | 382 | 0.0183 | 36 | c.148 others(55): Show |
SLC9A4 | ENSG00000180251.5 | transcript | ENST00000295269.5 | protein_coding | 6/11 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
SLC9A4_chr2_102468226_102538972 | 102510272 | C | CAGATACA others(29): Show |
intron_variant | MODIFIER | HG00597.hp1 NA18747.hp2 NA18951.hp2 others(5): Show |
a0001a0002 | a0001c0002a0002c0008 | a0001c0002t0001a0002c0008t0002 | a0001c0002t0001g0225a0001c0002t0001g0229a0001c0002t0001g0233others(5): Show | 8 | 382 | 0.0209 | 36 | c.148 others(55): Show |
SLC9A4 | ENSG00000180251.5 | transcript | ENST00000295269.5 | protein_coding | 6/11 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
SLC9A4_chr2_102468226_102538972 | 102510272 | C | CAGATACA others(29): Show |
intron_variant | MODIFIER | HG03942.hp1 NA18995.hp1 |
a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0265a0001c0002t0001g0286 | 2 | 382 | 0.0052 | 36 | c.148 others(55): Show |
SLC9A4 | ENSG00000180251.5 | transcript | ENST00000295269.5 | protein_coding | 6/11 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
SLC9A7_chrX_46594251_46764118 | 46748364 | A | AAAGGAAG others(29): Show |
intron_variant | MODIFIER | NA19062.hp1 | a0001 | a0001c0003 | a0001c0003t0002 | a0001c0003t0002g0037 | 1 | 250 | 0.0040 | 36 | c.325 others(55): Show |
SLC9A7 | ENSG00000065923.10 | transcript | ENST00000616978.5 | protein_coding | 1/16 | chrX | TogoVar | ||||||
SLC9A8_chr20_49807828_49897242 | 49834312 | G | GTGTATAT others(29): Show |
intron_variant | MODIFIER | HG00544.hp1 HG02056.hp1 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0026 | a0001c0001t0001g0254a0001c0001t0026g0246 | 2 | 360 | 0.0056 | 36 | c.290 others(53): Show |
SLC9A8 | ENSG00000197818.12 | transcript | ENST00000361573.3 | protein_coding | 3/15 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | |||||
SLCO1B1_chr12_21126194_21244796 | 21222395 | A | AATATATA others(29): Show |
intron_variant | MODIFIER | HG02300.hp1 | a0002 | a0002c0005 | a0002c0005t0001 | a0002c0005t0001g0164 | 1 | 318 | 0.0031 | 36 | c.174 others(51): Show |
SLCO1B1 | ENSG00000134538.3 | transcript | ENST00000256958.3 | protein_coding | 13/14 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
SLCO1B3_chr12_20805705_20921911 | 20918434 | G | GTATGTGT others(29): Show |
downstream_gene_variant | MODIFIER | HG00741.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0142 | 1 | 284 | 0.0035 | 36 | c.*21 others(47): Show |
SLCO1B3 | ENSG00000111700.13 | transcript | ENST00000381545.8 | protein_coding | 1524 | chr12 | TogoVar | ||||||
SLCO1B3_chr12_20805705_20921911 | 20918434 | G | GTATGTGT others(29): Show |
downstream_gene_variant | MODIFIER | HG02559.hp2 HG02896.hp1 HG02965.hp2 others(5): Show |
a0002 | a0002c0002 | a0002c0002t0002a0002c0002t0003 | a0002c0002t0002g0001a0002c0002t0002g0077a0002c0002t0002g0078others(5): Show | 8 | 284 | 0.0282 | 36 | c.*21 others(47): Show |
SLCO1B3 | ENSG00000111700.13 | transcript | ENST00000381545.8 | protein_coding | 1524 | chr12 | TogoVar | ||||||
SLCO3A1_chr15_91848708_92170903 | 91957033 | A | AGTATATA others(29): Show |
intron_variant | MODIFIER | NA19043.hp1 | a0001 | a0001c0001 | a0001c0001t0023 | a0001c0001t0023g0058 | 1 | 190 | 0.0053 | 36 | c.646 others(55): Show |
SLCO3A1 | ENSG00000176463.14 | transcript | ENST00000318445.11 | protein_coding | 2/9 | chr15 | TogoVar | ||||||
SLCO3A1_chr15_91848708_92170903 | 92016254 | T | TAGATAGA others(29): Show |
intron_variant | MODIFIER | HG02273.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0080 | 1 | 190 | 0.0053 | 36 | c.647 others(55): Show |
SLCO3A1 | ENSG00000176463.14 | transcript | ENST00000318445.11 | protein_coding | 2/9 | chr15 | TogoVar | ||||||
SLCO4A1_chr20_62637503_62677293 | 62671773 | C | CATAGCCT others(29): Show |
conservative_inframe_insertion | MODERATE | HG00544.hp2 | a0015 | a0015c0031 | a0015c0031t0002 | a0015c0031t0002g0020 | 1 | 432 | 0.0023 | 36 | c.205 others(45): Show |
p.Ile others(13): Show |
SLCO4A1 | ENSG00000101187.16 | transcript | ENST00000217159.6 | protein_coding | 12/12 | 2233/2716 | 2086/2169 | 696/722 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | |
SLCO6A1_chr5_102366774_102504001 | 102370294 | A | ATATATAT others(29): Show |
downstream_gene_variant | MODIFIER | NA18522.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0107 | 1 | 342 | 0.0029 | 36 | c.*18 others(47): Show |
SLCO6A1 | ENSG00000205359.10 | transcript | ENST00000506729.6 | protein_coding | 1479 | chr5 | TogoVar | ||||||
SLCO6A1_chr5_102366774_102504001 | 102455027 | T | TATATATA others(29): Show |
intron_variant | MODIFIER | HG01243.hp2 HG02055.hp2 HG02145.hp1 others(5): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0266a0001c0001t0001g0267a0001c0001t0001g0268others(5): Show | 8 | 342 | 0.0234 | 36 | c.113 others(55): Show |
SLCO6A1 | ENSG00000205359.10 | transcript | ENST00000506729.6 | protein_coding | 6/13 | chr5 | TogoVar | ||||||
SLFN12_chr17_35405922_35437500 | 35434408 | G | GAAGGAAG others(29): Show |
upstream_gene_variant | MODIFIER | HG03098.hp2 | a0003 | a0003c0003 | a0003c0003t0002 | a0003c0003t0002g0071 | 1 | 426 | 0.0024 | 36 | c.-22 others(47): Show |
SLFN12 | ENSG00000172123.13 | transcript | ENST00000304905.10 | protein_coding | 1909 | chr17 | TogoVar | ||||||
SLFN14_chr17_35538985_35565819 | 35561741 | A | AAAAGAAA others(29): Show |
upstream_gene_variant | MODIFIER | HG00639.hp2 HG01071.hp2 HG02717.hp2 others(1): Show |
a0005a0007a0018 | a0005c0005a0007c0008a0018c0025 | a0005c0005t0024a0007c0008t0008a0018c0025t0010 | a0005c0005t0024g0123a0007c0008t0008g0008a0018c0025t0010g0052 | 4 | 428 | 0.0094 | 36 | c.-10 others(47): Show |
SLFN14 | ENSG00000236320.4 | transcript | ENST00000674182.1 | protein_coding | 923 | chr17 | TogoVar | ||||||
SLFN14_chr17_35538985_35565819 | 35561745 | A | AAAAGAAA others(29): Show |
upstream_gene_variant | MODIFIER | HG01099.hp2 | a0008 | a0008c0009 | a0008c0009t0006 | a0008c0009t0006g0098 | 1 | 428 | 0.0023 | 36 | c.-11 others(47): Show |
SLFN14 | ENSG00000236320.4 | transcript | ENST00000674182.1 | protein_coding | 927 | chr17 | TogoVar | ||||||
SLIT1_chr10_96993038_97190959 | 97166569 | G | GAGAGAGA others(29): Show |
intron_variant | MODIFIER | HG00558.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0128 | 1 | 256 | 0.0039 | 36 | c.198 others(53): Show |
SLIT1 | ENSG00000187122.17 | transcript | ENST00000266058.9 | protein_coding | 1/36 | chr10 | TogoVar | ||||||
SLIT2_chr4_20246905_20625561 | 20307160 | C | CTCCCTCC others(29): Show |
intron_variant | MODIFIER | HG02451.hp1 | a0001 | a0001c0006 | a0001c0006t0042 | a0001c0006t0042g0084 | 1 | 230 | 0.0044 | 36 | c.395 others(55): Show |
SLIT2 | ENSG00000145147.20 | transcript | ENST00000504154.6 | protein_coding | 4/36 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | |||||
SLIT2_chr4_20246905_20625561 | 20307160 | C | CTCCCTCC others(29): Show |
intron_variant | MODIFIER | HG00408.hp2 HG00741.hp1 HG01070.hp2 others(1): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0002 | a0001c0001t0001g0104a0001c0001t0001g0105a0001c0001t0001g0113others(1): Show | 4 | 230 | 0.0174 | 36 | c.395 others(55): Show |
SLIT2 | ENSG00000145147.20 | transcript | ENST00000504154.6 | protein_coding | 4/36 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | |||||
SLIT2_chr4_20246905_20625561 | 20472460 | C | CTATATCT others(29): Show |
intron_variant | MODIFIER | HG01346.hp2 HG01496.hp1 |
a0002 | a0002c0009 | a0002c0009t0001a0002c0009t0004 | a0002c0009t0001g0110a0002c0009t0004g0203 | 2 | 230 | 0.0087 | 36 | c.467 others(53): Show |
SLIT2 | ENSG00000145147.20 | transcript | ENST00000504154.6 | protein_coding | 5/36 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | |||||
SLIT3_chr5_168656740_169306139 | 168736632 | C | CTGCCTGG others(29): Show |
intron_variant | MODIFIER | HG01934.hp2 HG02895.hp2 HG02897.hp1 others(5): Show |
a0001a0002a0003 | a0001c0001a0001c0004a0002c0002others(1): Show | a0001c0001t0001a0001c0004t0006a0001c0004t0010others(4): Show | a0001c0001t0001g0034a0001c0004t0006g0060a0001c0004t0010g0131others(5): Show | 8 | 132 | 0.0606 | 36 | c.227 others(57): Show |
SLIT3 | ENSG00000184347.16 | transcript | ENST00000519560.6 | protein_coding | 20/35 | chr5 | TogoVar | ||||||
SLIT3_chr5_168656740_169306139 | 168736711 | G | GGCTTGCC others(29): Show |
intron_variant | MODIFIER | HG02486.hp2 HG02976.hp2 NA19030.hp2 |
a0001a0004 | a0001c0003a0001c0015a0004c0025 | a0001c0003t0017a0001c0015t0017a0004c0025t0006 | a0001c0003t0017g0050a0001c0015t0017g0089a0004c0025t0006g0013 | 3 | 132 | 0.0227 | 36 | c.227 others(57): Show |
SLIT3 | ENSG00000184347.16 | transcript | ENST00000519560.6 | protein_coding | 20/35 | chr5 | TogoVar | ||||||
SLIT3_chr5_168656740_169306139 | 168884549 | G | GATATATA others(29): Show |
intron_variant | MODIFIER | HG02965.hp1 | a0002 | a0002c0053 | a0002c0053t0003 | a0002c0053t0003g0123 | 1 | 132 | 0.0076 | 36 | c.414 others(53): Show |
SLIT3 | ENSG00000184347.16 | transcript | ENST00000519560.6 | protein_coding | 4/35 | chr5 | TogoVar | ||||||
SLMAP_chr3_57751309_57935003 | 57906300 | C | CTTTTTTT others(29): Show |
intron_variant | MODIFIER | NA19080.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0067 | 1 | 310 | 0.0032 | 36 | c.150 others(55): Show |
SLMAP | ENSG00000163681.17 | transcript | ENST00000671191.1 | protein_coding | 17/24 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
SLTM_chr15_58874050_58938679 | 58882181 | C | CAAAAAAA others(29): Show |
intron_variant | MODIFIER | HG00323.hp1 NA19030.hp1 |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0268a0001c0001t0002g0316 | 2 | 386 | 0.0052 | 36 | c.299 others(55): Show |
SLTM | ENSG00000137776.17 | transcript | ENST00000380516.7 | protein_coding | 20/20 | chr15 | TogoVar | ||||||
SMAD2_chr18_47803957_47935659 | 47850232 | T | TTATATAT others(29): Show |
intron_variant | MODIFIER | HG00140.hp1 HG01256.hp1 HG01258.hp1 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0092a0001c0001t0202a0001c0001t0203others(2): Show | a0001c0001t0092g0284a0001c0001t0202g0220a0001c0001t0203g0233others(2): Show | 5 | 310 | 0.0161 | 36 | c.784 others(53): Show |
SMAD2 | ENSG00000175387.16 | transcript | ENST00000262160.11 | protein_coding | 7/10 | chr18 | TogoVar | ||||||
SMAD2_chr18_47803957_47935659 | 47882041 | C | CTTTTTTT others(29): Show |
intron_variant | MODIFIER | HG00735.hp2 HG02135.hp2 NA19080.hp2 |
a0001 | a0001c0001 | a0001c0001t0047a0001c0001t0099a0001c0001t0130 | a0001c0001t0047g0222a0001c0001t0099g0221a0001c0001t0130g0244 | 3 | 310 | 0.0097 | 36 | c.237 others(55): Show |
SMAD2 | ENSG00000175387.16 | transcript | ENST00000262160.11 | protein_coding | 2/10 | chr18 | TogoVar | ||||||
SMAP1_chr6_70662883_70867003 | 70855050 | T | TCATATAC others(29): Show |
intron_variant | MODIFIER | HG02615.hp1 HG03579.hp2 NA18981.hp2 others(1): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0002c0002t0002 | a0001c0001t0001g0167a0001c0001t0001g0222a0002c0002t0002g0298others(1): Show | 4 | 306 | 0.0131 | 36 | c.790 others(53): Show |
SMAP1 | ENSG00000112305.15 | transcript | ENST00000370455.8 | protein_coding | 8/10 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |||||
SMARCA2_chr9_2010347_2198620 | 2176182 | G | GTTTTTTT others(29): Show |
intron_variant | MODIFIER | HG01884.hp1 | a0001 | a0001c0003 | a0001c0003t0001 | a0001c0003t0001g0070 | 1 | 316 | 0.0032 | 36 | c.425 others(55): Show |
SMARCA2 | ENSG00000080503.25 | transcript | ENST00000349721.8 | protein_coding | 29/33 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | |||||
SMARCAD1_chr4_94202865_94296292 | 94275796 | C | CTTTTTTT others(29): Show |
intron_variant | MODIFIER | HG02280.hp1 HG02717.hp2 |
a0002 | a0002c0003 | a0002c0003t0003 | a0002c0003t0003g0147a0002c0003t0003g0148 | 2 | 322 | 0.0062 | 36 | c.180 others(53): Show |
SMARCAD1 | ENSG00000163104.18 | transcript | ENST00000354268.9 | protein_coding | 14/23 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | |||||
SMARCC1_chr3_47580269_47786893 | 47600998 | T | TGAGAGAG others(29): Show |
intron_variant | MODIFIER | HG02280.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0018 | 1 | 219 | 0.0046 | 36 | c.304 others(55): Show |
SMARCC1 | ENSG00000173473.11 | transcript | ENST00000254480.10 | protein_coding | 26/27 | chr3 | TogoVar | ||||||
SMARCC1_chr3_47580269_47786893 | 47747440 | A | AAAATATA others(29): Show |
intron_variant | MODIFIER | HG00099.hp2 HG00639.hp1 HG00733.hp1 others(25): Show |
a0001a0005a0006 | a0001c0001a0001c0002a0005c0003others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0006others(3): Show | a0001c0001t0001g0007a0001c0001t0001g0011a0001c0001t0001g0020others(25): Show | 28 | 219 | 0.1279 | 36 | c.316 others(53): Show |
SMARCC1 | ENSG00000173473.11 | transcript | ENST00000254480.10 | protein_coding | 2/27 | chr3 | TogoVar | ||||||
SMC1A_chrX_53369149_53427654 | 53410926 | C | CAAAAAAA others(29): Show |
intron_variant | MODIFIER | HG02559.hp2 NA21309.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0104a0001c0001t0001g0105 | 2 | 213 | 0.0094 | 36 | c.125 others(53): Show |
SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 7/24 | chrX | TogoVar | ||||||
SMC6_chr2_17658812_17758810 | 17753324 | T | TGGGGACG others(29): Show |
intron_variant | MODIFIER | HG00280.hp2 HG00323.hp1 HG00642.hp2 others(38): Show |
a0001a0002a0003others(1): Show | a0001c0001a0002c0003a0003c0002others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(5): Show | a0001c0001t0001g0148a0001c0001t0001g0149a0001c0001t0001g0171others(36): Show | 41 | 254 | 0.1614 | 36 | c.-93 others(51): Show |
SMC6 | ENSG00000163029.16 | transcript | ENST00000448223.7 | protein_coding | 1/27 | chr2 | TogoVar | ||||||
SMCHD1_chr18_2650726_2810017 | 2679480 | C | CAAAAAAA others(29): Show |
intron_variant | MODIFIER | HG00673.hp2 | a0001 | a0001c0004 | a0001c0004t0002 | a0001c0004t0002g0047 | 1 | 340 | 0.0029 | 36 | c.638 others(53): Show |
SMCHD1 | ENSG00000101596.17 | transcript | ENST00000320876.11 | protein_coding | 5/47 | INFO_REALIGN_3_PRIME | chr18 | TogoVar | |||||
SMCHD1_chr18_2650726_2810017 | 2708907 | T | TATATATA others(29): Show |
intron_variant | MODIFIER | HG02818.hp1 | a0002 | a0002c0016 | a0002c0016t0034 | a0002c0016t0034g0019 | 1 | 340 | 0.0029 | 36 | c.226 others(53): Show |
SMCHD1 | ENSG00000101596.17 | transcript | ENST00000320876.11 | protein_coding | 17/47 | INFO_REALIGN_3_PRIME | chr18 | TogoVar | |||||
SMCO4_chr11_93473472_93548391 | 93546824 | C | CTATGTGC others(29): Show |
upstream_gene_variant | MODIFIER | NA18963.hp1 | a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0024 | 1 | 412 | 0.0024 | 36 | c.-37 others(47): Show |
SMCO4 | ENSG00000166002.7 | transcript | ENST00000298966.7 | protein_coding | 3434 | chr11 | TogoVar | ||||||
SMG1_chr16_18799860_18931408 | 18844570 | T | TCTCTCTC others(29): Show |
intron_variant | MODIFIER | HG02486.hp2 HG02895.hp2 HG02965.hp1 others(3): Show |
a0001a0011 | a0001c0004a0011c0020 | a0001c0004t0004a0011c0020t0004 | a0001c0004t0004g0016a0001c0004t0004g0017a0001c0004t0004g0018others(3): Show | 6 | 300 | 0.0200 | 36 | c.621 others(53): Show |
SMG1 | ENSG00000157106.18 | transcript | ENST00000446231.7 | protein_coding | 39/62 | chr16 | TogoVar | ||||||
SMG9_chr19_43722983_43759962 | 43724830 | T | TATATATA others(29): Show |
downstream_gene_variant | MODIFIER | NA18973.hp2 NA18994.hp1 |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0036 | a0001c0001t0002g0035a0001c0001t0036g0058 | 2 | 320 | 0.0063 | 36 | c.*67 others(47): Show |
SMG9 | ENSG00000105771.14 | transcript | ENST00000270066.11 | protein_coding | 3152 | chr19 | TogoVar | ||||||
SMG9_chr19_43722983_43759962 | 43724830 | T | TATATATA others(29): Show |
downstream_gene_variant | MODIFIER | NA18950.hp2 | a0001 | a0001c0001 | a0001c0001t0035 | a0001c0001t0035g0059 | 1 | 320 | 0.0031 | 36 | c.*67 others(47): Show |
SMG9 | ENSG00000105771.14 | transcript | ENST00000270066.11 | protein_coding | 3152 | chr19 | TogoVar | ||||||
SMG9_chr19_43722983_43759962 | 43724830 | T | TATATATA others(29): Show |
downstream_gene_variant | MODIFIER | NA19058.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0043 | 1 | 320 | 0.0031 | 36 | c.*67 others(47): Show |
SMG9 | ENSG00000105771.14 | transcript | ENST00000270066.11 | protein_coding | 3152 | chr19 | TogoVar |