Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
ZNF799_chr19_12385016_12406271	12386484	G G	GAAGGGGA others(29): Show GAAGGGGAAGGGAAAGGGGAAGGGGAAGGGGAAGGGA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02451.hp1 HG02451.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0112 a0001c0001t0001g0112	1	446	0.0022	36	c.39 others(47): Show c.3981_*3982insTCCCTTCCCCTTCCCCTTCCCCTTTCCCTTCCCC TT	ZNF799	ENSG00000196466.10	transcript	ENST00000430385.3	protein_coding		3531		chr19	TogoVar
ZNF804B_chr7_88754700_89343528	88854414	C C	CCTTTCTT others(29): Show CCTTTCTTTCTTCCTTTCTTTCTTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02451.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0097 a0002c0002t0001g0097	1	166	0.0060	36	c.108 others(55): Show c.108+94341_108+94342insCCTTTCTTTCTTTCTTTCTTTCTTTC TTTCTTTCTT	ZNF804B	ENSG00000182348.7	transcript	ENST00000333190.5	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr7	TogoVar
ZNF804B_chr7_88754700_89343528	88854414	C C	CCTTTCTT others(29): Show CCTTTCTTTCTTTCTTCCTTCCTTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG00597.hp2 HG02738.hp2 HG00597.hp2 HG02738.hp2	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0010 a0001c0004t0021 a0001c0001t0010 a0001c0004t0021	a0001c0001t0010g0155 a0001c0004t0021g0153 a0001c0001t0010g0155 a0001c0004t0021g0153	2	166	0.0121	36	c.108 others(55): Show c.108+94345_108+94346insCCTTCCTTTCTTTCTTTCTTTCTTTC TTTCTTTCTT	ZNF804B	ENSG00000182348.7	transcript	ENST00000333190.5	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr7	TogoVar
ZNF804B_chr7_88754700_89343528	89220176	T T	TGCGTATA others(29): Show TGCGTATATATATATATATCCACACATATATATGTGC	intron_variant intron_variant	MODIFIER	NA21309.hp1 NA21309.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0131 a0002c0002t0001g0131	1	166	0.0060	36	c.249 others(53): Show c.249+1882_249+1883insCGTATATATATATATATCCACACATATA TATGTGCG	ZNF804B	ENSG00000182348.7	transcript	ENST00000333190.5	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr7	TogoVar
ZNF823_chr19_11716265_11743946	11726287	C C	CATATACA others(29): Show CATATACATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01070.hp1 HG01071.hp2 HG01261.hp2 others(16): Show HG01070.hp1 HG01071.hp2 HG01261.hp2 HG01358.hp1 HG01515.hp1 HG01517.hp1 HG01928.hp1 HG02572.hp2 HG02735.hp1 HG02738.hp1 HG04115.hp1 HG04184.hp2 NA18956.hp1 NA18960.hp2 NA18966.hp1 NA19056.hp1 NA19080.hp2 NA19087.hp1 NA19090.hp1	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0001 a0001c0001t0002 a0001c0004t0001 a0001c0001t0001 a0001c0001t0002 a0001c0004t0001	a0001c0001t0001g0004 a0001c0001t0001g0054 a0001c0001t0001g0103 others(9): Show a0001c0001t0001g0004 a0001c0001t0001g0054 a0001c0001t0001g0103 a0001c0001t0001g0109 a0001c0001t0001g0115 a0001c0001t0001g0124 a0001c0001t0001g0156 a0001c0001t0001g0169 a0001c0001t0001g0246 a0001c0001t0001g0260 a0001c0001t0002g0170 a0001c0004t0001g0242	19	422	0.0450	36	c.4-9 others(47): Show c.4-961_4-960insATATATATATATATATATATATATATATATGTAT AT	ZNF823	ENSG00000197933.13	transcript	ENST00000341191.11	protein_coding	1/3			chr19	TogoVar
ZNF827_chr4_145752627_145943823	145768916	T T	TATATATA others(29): Show TATATATATATATATATATATATATATATATATAAAA	intron_variant intron_variant	MODIFIER	HG01192.hp1 HG01192.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0017 a0001c0001t0017	a0001c0001t0017g0002 a0001c0001t0017g0002	1	254	0.0039	36	c.286 others(55): Show c.2861-3179_2861-3178insTTTTATATATATATATATATATATAT ATATATATAT	ZNF827	ENSG00000151612.18	transcript	ENST00000508784.6	protein_coding	11/14			chr4	TogoVar
ZNF839_chr14_102314746_102347367	102328369	A A	AATATATA others(29): Show AATATATATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18989.hp1 NA18989.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0150 a0001c0002t0002g0150	1	410	0.0024	36	c.119 others(55): Show c.1191+1483_1191+1484insTATATATATATATATATATATATATA TATATATATA	ZNF839	ENSG00000022976.16	transcript	ENST00000442396.7	protein_coding	2/7		INFO_REALIGN_3_PRIME	chr14	TogoVar
ZNF83_chr19_52607377_52643355	52638390	C C	CTGGGCGG others(29): Show CTGGGCGGGGCCCGCGAGGTGGGCGGGGCCCGCGAGG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00642.hp2 HG01106.hp2 HG01109.hp1 others(13): Show HG00642.hp2 HG01106.hp2 HG01109.hp1 HG01123.hp1 HG01167.hp2 HG01169.hp1 HG01255.hp1 HG01361.hp2 HG01515.hp1 HG01517.hp2 HG01891.hp1 HG01928.hp1 HG01934.hp1 HG01993.hp1 HG02735.hp1 HG04115.hp1	a0001 a0004 a0009 a0001 a0004 a0009	a0001c0001 a0004c0004 a0009c0013 a0001c0001 a0004c0004 a0009c0013	a0001c0001t0001 a0004c0004t0005 a0009c0013t0001 a0001c0001t0001 a0004c0004t0005 a0009c0013t0001	a0001c0001t0001g0022 a0001c0001t0001g0055 a0001c0001t0001g0281 others(9): Show a0001c0001t0001g0022 a0001c0001t0001g0055 a0001c0001t0001g0281 a0001c0001t0001g0282 a0001c0001t0001g0283 a0001c0001t0001g0284 a0001c0001t0001g0285 a0001c0001t0001g0286 a0001c0001t0001g0287 a0001c0001t0001g0288 a0004c0004t0005g0018 a0009c0013t0001g0056	16	460	0.0348	36	c.-40 others(45): Show c.-401_-400insCCTCGCGGGCCCCGCCCACCTCGCGGGCCCCGCCCA	ZNF83	ENSG00000167766.21	transcript	ENST00000301096.8	protein_coding		36		chr19	TogoVar
ZNF841_chr19_52059465_52100765	52090654	G G	GGAAAGAA others(29): Show GGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA	intron_variant intron_variant	MODIFIER	NA18959.hp2 NA18959.hp2	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0001 a0004c0004t0001	a0004c0004t0001g0152 a0004c0004t0001g0152	1	368	0.0027	36	c.-14 others(55): Show c.-143-1688_-143-1653dupTTTCTTTCTTTCTTTCTTTCTTTCTT TCTTTCTTTC	ZNF841	ENSG00000197608.12	transcript	ENST00000594440.6	protein_coding	2/6			chr19	TogoVar
ZNF844_chr19_12059731_12086565	12067951	A A	AGAAGGAA others(29): Show AGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAG	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG01243.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0121 a0001c0001t0001g0121	1	362	0.0028	36	c.3+3 others(49): Show c.3+3082_3+3083insGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA GGAA	ZNF844	ENSG00000223547.10	transcript	ENST00000439326.8	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr19	TogoVar
ZNF844_chr19_12059731_12086565	12067959	A A	AGAAGGAA others(29): Show AGAAGGAAAGAAGGAAGGAAGGAAGGAAGGAAGGAAG	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG02896.hp1 HG02897.hp1 others(2): Show HG02055.hp2 HG02896.hp1 HG02897.hp1 HG03453.hp2 HG03471.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0005 a0003c0003t0057 a0003c0003t0005 a0003c0003t0057	a0003c0003t0005g0212 a0003c0003t0005g0216 a0003c0003t0005g0219 others(2): Show a0003c0003t0005g0212 a0003c0003t0005g0216 a0003c0003t0005g0219 a0003c0003t0005g0222 a0003c0003t0057g0213	5	362	0.0138	36	c.3+3 others(49): Show c.3+3090_3+3091insAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA GGAA	ZNF844	ENSG00000223547.10	transcript	ENST00000439326.8	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr19	TogoVar
ZNF844_chr19_12059731_12086565	12067959	A A	AGAAGGAA others(29): Show AGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAG	intron_variant intron_variant	MODIFIER	HG02145.hp2 HG03471.hp1 NA20300.hp2 HG02145.hp2 HG03471.hp1 NA20300.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0003 a0003c0003t0005 a0001c0001t0003 a0003c0003t0005	a0001c0001t0003g0039 a0003c0003t0005g0203 a0001c0001t0003g0039 a0003c0003t0005g0203	3	362	0.0083	36	c.3+3 others(49): Show c.3+3110_3+3111insGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA GGAA	ZNF844	ENSG00000223547.10	transcript	ENST00000439326.8	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr19	TogoVar
ZNF844_chr19_12059731_12086565	12067983	G G	GGAAGGAA others(29): Show GGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAA	intron_variant intron_variant	MODIFIER	HG01175.hp1 HG02155.hp2 NA18945.hp2 others(3): Show HG01175.hp1 HG02155.hp2 NA18945.hp2 NA18951.hp1 NA18974.hp2 NA19066.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0004 a0002c0002t0004	a0002c0002t0004g0048 a0002c0002t0004g0051 a0002c0002t0004g0244 others(2): Show a0002c0002t0004g0048 a0002c0002t0004g0051 a0002c0002t0004g0244 a0002c0002t0004g0245 a0002c0002t0004g0252	6	362	0.0166	36	c.3+3 others(49): Show c.3+3110_3+3111insGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA AGAA	ZNF844	ENSG00000223547.10	transcript	ENST00000439326.8	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr19	TogoVar
ZNF846_chr19_9750357_9773738	9754563	T T	TCAAAAAA others(29): Show TCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02922.hp2 NA18955.hp1 NA19010.hp1 HG02922.hp2 NA18955.hp1 NA19010.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0010 a0002c0002t0033 a0002c0002t0034 a0002c0002t0010 a0002c0002t0033 a0002c0002t0034	a0002c0002t0010g0045 a0002c0002t0033g0264 a0002c0002t0034g0265 a0002c0002t0010g0045 a0002c0002t0033g0264 a0002c0002t0034g0265	3	372	0.0081	36	c.29 others(47): Show c.2911_*2912insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT TG	ZNF846	ENSG00000196605.7	transcript	ENST00000397902.7	protein_coding		793		chr19	TogoVar
ZNF84_chr12_133032509_133068299	133034209	T T	TTATATAT others(29): Show TTATATATATATATATATATATATATATATATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18987.hp1 NA19006.hp1 NA18987.hp1 NA19006.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0124 a0001c0001t0003g0133 a0001c0001t0003g0124 a0001c0001t0003g0133	2	318	0.0063	36	c.-35 others(47): Show c.-3527_-3526insTATATATATATATATATATATATATATATATATA TA	ZNF84	ENSG00000198040.11	transcript	ENST00000539354.6	protein_coding		3299		chr12	TogoVar
ZNF888_chr19_52899415_52928428	52918969	C C	CCTCCCTC others(29): Show CCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCT	intron_variant intron_variant	MODIFIER	HG00609.hp2 HG00609.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0190 a0001c0001t0002g0190	1	426	0.0024	36	c.-17 others(51): Show c.-177-33_-177-32insAGGGAGAGGGAGAGGGAGAGGGAGAGGGAG AGGGAG	ZNF888	ENSG00000213793.6	transcript	ENST00000638862.2	protein_coding	1/4			chr19	TogoVar
ZNHIT6_chr1_85644417_85713433	85667961	A A	AAAAAAAA others(29): Show AAAAAAAAAAAAAAAAAATGTATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03942.hp2 HG03942.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0158 a0001c0001t0004g0158	1	376	0.0027	36	c.124 others(55): Show c.1247+9274_1247+9275insATATATATATATATATACATTTTTTT TTTTTTTTTT	ZNHIT6	ENSG00000117174.11	transcript	ENST00000370574.4	protein_coding	8/9			chr1	TogoVar
ZNHIT6_chr1_85644417_85713433	85667961	A A	AAAAAAAA others(29): Show AAAAAAAAAAAAAAAATATGTATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02886.hp1 HG02886.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0214 a0001c0001t0008g0214	1	376	0.0027	36	c.124 others(55): Show c.1247+9274_1247+9275insATATATATATATATATACATATTTTT TTTTTTTTTT	ZNHIT6	ENSG00000117174.11	transcript	ENST00000370574.4	protein_coding	8/9			chr1	TogoVar
ZNHIT6_chr1_85644417_85713433	85667961	A A	AAAAAAAA others(29): Show AAAAAAAAAAAAAAAATGTATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18982.hp2 NA18982.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0151 a0001c0001t0004g0151	1	376	0.0027	36	c.124 others(55): Show c.1247+9274_1247+9275insATATATATATATATATATACATTTTT TTTTTTTTTT	ZNHIT6	ENSG00000117174.11	transcript	ENST00000370574.4	protein_coding	8/9			chr1	TogoVar
ZNRF3_chr22_28878572_29062488	28983948	T T	TGCATACC others(29): Show TGCATACCGCCAAAAGATAAAATTTGAAATCTGGTTA	intron_variant intron_variant	MODIFIER	HG02056.hp2 HG03704.hp2 HG03831.hp2 HG02056.hp2 HG03704.hp2 HG03831.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0001t0038 a0001c0002t0001 a0001c0001t0002 a0001c0001t0038 a0001c0002t0001	a0001c0001t0002g0206 a0001c0001t0038g0018 a0001c0002t0001g0121 a0001c0001t0002g0206 a0001c0001t0038g0018 a0001c0002t0001g0121	3	270	0.0111	36	c.301 others(53): Show c.301-3127_301-3126insCATACCGCCAAAAGATAAAATTTGAAAT CTGGTTAG	ZNRF3	ENSG00000183579.16	transcript	ENST00000544604.7	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr22	TogoVar
ZP3_chr7_76419950_76447069	76426907	C C	CACACACA others(29): Show CACACACACACACACACACACACACACACACACACAA	intron_variant intron_variant	MODIFIER	NA18956.hp1 NA19063.hp1 NA18956.hp1 NA19063.hp1	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0001 a0003c0004t0001	a0003c0004t0001g0371 a0003c0004t0001g0374 a0003c0004t0001g0371 a0003c0004t0001g0374	2	424	0.0047	36	c.312 others(53): Show c.312+1632_312+1633insCACACACACACACACACACACACACACA CACACAAA	ZP3	ENSG00000188372.15	transcript	ENST00000394857.8	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr7	TogoVar
ZRANB2_chr1_71058291_71086035	71059764	A A	AATGTATA others(29): Show AATGTATATATAAACATATATATGTATAAACAAATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19079.hp2 NA19079.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0002	1	434	0.0023	36	c.53 others(47): Show c.5309_*5310insATATTTGTTTATACATATATATGTTTATATATAC AT	ZRANB2	ENSG00000132485.14	transcript	ENST00000370920.8	protein_coding		3526		chr1	TogoVar
ZRANB3_chr2_135191969_135536218	135245926	C C	CAAAAAAA others(29): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03486.hp1 HG03486.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0118 a0001c0001t0001g0118	1	214	0.0047	36	c.154 others(57): Show c.1540-15000_1540-14999insTTTTTTTTTTTTTTTTTTTTTTTT TTTTTTTTTTTT	ZRANB3	ENSG00000121988.18	transcript	ENST00000264159.11	protein_coding	12/20			chr2	TogoVar
ZSCAN21_chr7_100044774_100070040	100051178	C C	CAAAAAAA others(29): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00597.hp2 HG00597.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0199 a0001c0001t0003g0199	1	392	0.0026	36	c.-97 others(53): Show c.-97+1362_-97+1363insAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAA	ZSCAN21	ENSG00000166529.16	transcript	ENST00000292450.9	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr7	TogoVar
ZSCAN29_chr15_43353175_43376043	43370975	A A	ACCCCGGC others(29): Show ACCCCGGCCCCGGCCCCGGCCCCGGCCCCGGCCCCGG	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02040.hp2 NA18991.hp2 NA19057.hp1 HG02040.hp2 NA18991.hp2 NA19057.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0014 a0002c0002t0014	a0002c0002t0014g0031 a0002c0002t0014g0053 a0002c0002t0014g0031 a0002c0002t0014g0053	3	394	0.0076	36	c.-53 others(45): Show c.-531_-530insCCGGGGCCGGGGCCGGGGCCGGGGCCGGGGCCGGGG	ZSCAN29	ENSG00000140265.14	transcript	ENST00000684362.1	protein_coding	1/6	1063		chr15	TogoVar
ZSCAN4_chr19_57663935_57684152	57680505	T T	TTGTGGTG others(29): Show TTGTGGTGAGCCAAGATCAAGCCATTGCACTCTAGCC	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18952.hp2 NA18952.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0019 a0001c0002t0019	a0001c0002t0019g0143 a0001c0002t0019g0143	1	426	0.0024	36	c.16 others(47): Show c.1600_*1601insTGTGGTGAGCCAAGATCAAGCCATTGCACTCTAG CC	ZSCAN4	ENSG00000180532.12	transcript	ENST00000318203.9	protein_coding		1354		chr19	TogoVar
ZSWIM2_chr2_186822475_186854170	186846808	C C	CATATATA others(29): Show CATATATATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18989.hp1 NA18989.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0003 a0002c0003t0003	a0002c0003t0003g0048 a0002c0003t0003g0048	1	328	0.0031	36	c.242 others(51): Show c.242+910_242+911insATATATATATATATATATATATATATATAT ATATAT	ZSWIM2	ENSG00000163012.4	transcript	ENST00000295131.3	protein_coding	2/8			chr2	TogoVar
ZSWIM3_chr20_45852614_45884122	45854230	T T	TGCCCAGG others(29): Show TGCCCAGGCTGGAGTGCTCGCCCAGGCTGGAGTGCTC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00140.hp2 HG01167.hp1 HG02145.hp1 others(7): Show HG00140.hp2 HG01167.hp1 HG02145.hp1 HG02280.hp1 HG02965.hp1 HG02976.hp1 HG03139.hp2 HG03516.hp2 HG03834.hp2 NA19240.hp2	a0001 a0003 a0001 a0003	a0001c0002 a0003c0005 a0001c0002 a0003c0005	a0001c0002t0001 a0003c0005t0001 a0001c0002t0001 a0003c0005t0001	a0001c0002t0001g0217 a0001c0002t0001g0256 a0001c0002t0001g0260 others(6): Show a0001c0002t0001g0217 a0001c0002t0001g0256 a0001c0002t0001g0260 a0003c0005t0001g0033 a0003c0005t0001g0200 a0003c0005t0001g0201 a0003c0005t0001g0202 a0003c0005t0001g0218 a0003c0005t0001g0268	10	386	0.0259	36	c.-35 others(47): Show c.-3596_-3595insGCCCAGGCTGGAGTGCTCGCCCAGGCTGGAGTGC TC	ZSWIM3	ENSG00000132801.7	transcript	ENST00000255152.3	protein_coding		3383		chr20	TogoVar
ZSWIM5_chr1_45011399_45211605	45044746	A A	AAAAAAAA others(29): Show AAAAAAAAAAAAAAAAAAAATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG01243.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0121 a0001c0001t0001g0121	1	234	0.0043	36	c.143 others(55): Show c.1433-1352_1433-1351insATATATATATATATATATTTTTTTTT TTTTTTTTTT	ZSWIM5	ENSG00000162415.7	transcript	ENST00000359600.6	protein_coding	5/13			chr1	TogoVar
ZSWIM5_chr1_45011399_45211605	45044746	A A	AAAAAAAA others(29): Show AAAAAAAAAAAAAATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG03041.hp2 HG00639.hp2 HG03041.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0129 a0001c0001t0001g0192 a0001c0001t0001g0129 a0001c0001t0001g0192	2	234	0.0086	36	c.143 others(55): Show c.1433-1352_1433-1351insATATATATATATATATATATATATTT TTTTTTTTTT	ZSWIM5	ENSG00000162415.7	transcript	ENST00000359600.6	protein_coding	5/13			chr1	TogoVar
ZSWIM5_chr1_45011399_45211605	45044810	T T	TATATATA others(29): Show TATATATAAATATATATATATAAATATATATATATAA	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG01891.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0073 a0001c0002t0001g0073	1	234	0.0043	36	c.143 others(55): Show c.1433-1416_1433-1415insTTATATATATATATTTATATATATAT ATTTATATAT	ZSWIM5	ENSG00000162415.7	transcript	ENST00000359600.6	protein_coding	5/13			chr1	TogoVar
ZSWIM9_chr19_48165680_48202620	48187465	A A	ATATATTA others(29): Show ATATATTATATATATTATATATTATATTATAATATAT	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02723.hp2 HG02976.hp2 others(3): Show HG02258.hp1 HG02723.hp2 HG02976.hp2 HG03453.hp1 NA20129.hp1 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0001 a0001c0004t0001 a0001c0001t0001 a0001c0004t0001	a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0072 others(3): Show a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0004t0001g0227	6	388	0.0155	36	c.588 others(53): Show c.588+4709_588+4744dupATATTATATATTATATTATAATATATTA TATTATAT	ZSWIM9	ENSG00000185453.13	transcript	ENST00000614654.2	protein_coding	3/3		INFO_REALIGN_3_PRIME	chr19	TogoVar
ZSWIM9_chr19_48165680_48202620	48192470	A A	AGTATATA others(29): Show AGTATATATATATATATATATATATATATATATGTGT	intron_variant intron_variant	MODIFIER	HG02896.hp1 HG02897.hp1 HG03540.hp1 HG02896.hp1 HG02897.hp1 HG03540.hp1	a0002 a0002	a0002c0006 a0002c0006	a0002c0006t0003 a0002c0006t0003	a0002c0006t0003g0015 a0002c0006t0003g0286 a0002c0006t0003g0015 a0002c0006t0003g0286	3	388	0.0077	36	c.589 others(53): Show c.589-2183_589-2182insGTATATATATATATATATATATATATAT ATATGTGT	ZSWIM9	ENSG00000185453.13	transcript	ENST00000614654.2	protein_coding	3/3			chr19	TogoVar
ZWILCH_chr15_66500326_66555130	66517430	G G	GTGTGTGT others(29): Show GTGTGTGTATATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	NA19005.hp1 NA19005.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0328 a0001c0001t0001g0328	1	410	0.0024	36	c.321 others(53): Show c.321-1448_321-1447insGTGTGTATATATATATATATATATATAT ATATATAT	ZWILCH	ENSG00000174442.12	transcript	ENST00000307897.10	protein_coding	4/18		INFO_REALIGN_3_PRIME	chr15	TogoVar
ZWILCH_chr15_66500326_66555130	66517430	G G	GTGTGTGT others(29): Show GTGTGTGTGTATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02027.hp1 HG02148.hp1 HG02293.hp1 others(1): Show HG02027.hp1 HG02148.hp1 HG02293.hp1 HG03654.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0010 a0001c0001t0001 a0001c0001t0010	a0001c0001t0001g0225 a0001c0001t0001g0226 a0001c0001t0001g0347 others(1): Show a0001c0001t0001g0225 a0001c0001t0001g0226 a0001c0001t0001g0347 a0001c0001t0010g0179	4	410	0.0098	36	c.321 others(53): Show c.321-1448_321-1447insGTGTGTGTATATATATATATATATATAT ATATATAT	ZWILCH	ENSG00000174442.12	transcript	ENST00000307897.10	protein_coding	4/18		INFO_REALIGN_3_PRIME	chr15	TogoVar
ZWILCH_chr15_66500326_66555130	66517430	G G	GTGTGTGT others(29): Show GTGTGTGTGTGTATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01081.hp1 HG01081.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0228 a0001c0001t0001g0228	1	410	0.0024	36	c.321 others(53): Show c.321-1448_321-1447insGTGTGTGTGTATATATATATATATATAT ATATATAT	ZWILCH	ENSG00000174442.12	transcript	ENST00000307897.10	protein_coding	4/18		INFO_REALIGN_3_PRIME	chr15	TogoVar
ZYG11B_chr1_52721453_52832336	52773627	A A	ATATATAT others(29): Show ATATATATATATATATATATATATATATATATATATT	intron_variant intron_variant	MODIFIER	NA18956.hp1 NA18956.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0026 a0001c0001t0004g0026	1	352	0.0028	36	c.951 others(53): Show c.951+1854_951+1855insATATATATATATATATATATATATATAT ATATATTT	ZYG11B	ENSG00000162378.13	transcript	ENST00000294353.7	protein_coding	3/13		INFO_REALIGN_3_PRIME	chr1	TogoVar
ZYG11B_chr1_52721453_52832336	52776225	A A	AATATATA others(29): Show AATATATATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02056.hp2 HG02056.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0064 a0001c0002t0064	a0001c0002t0064g0258 a0001c0002t0064g0258	1	352	0.0028	36	c.952 others(53): Show c.952-3627_952-3626insTATATATATATATATATATATATATATA TATATATA	ZYG11B	ENSG00000162378.13	transcript	ENST00000294353.7	protein_coding	3/13		INFO_REALIGN_3_PRIME	chr1	TogoVar
ZYG11B_chr1_52721453_52832336	52776229	A A	AAAAAAAA others(29): Show AAAAAAAAAAAAAAAATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG04228.hp2 HG04228.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0074 a0001c0001t0001g0074	1	352	0.0028	36	c.952 others(53): Show c.952-3623_952-3622insAAAAAAAAAAAAAATATATATATATATA TATATATA	ZYG11B	ENSG00000162378.13	transcript	ENST00000294353.7	protein_coding	3/13		INFO_REALIGN_3_PRIME	chr1	TogoVar
ZYG11B_chr1_52721453_52832336	52776229	A A	AAAAAAAA others(29): Show AAAAAAAAAATATATACATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18954.hp2 NA19056.hp1 NA18954.hp2 NA19056.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0018 a0001c0001t0004g0023 a0001c0001t0004g0018 a0001c0001t0004g0023	2	352	0.0057	36	c.952 others(53): Show c.952-3623_952-3622insAAAAAAAATATATACATATATATATATA TATATATA	ZYG11B	ENSG00000162378.13	transcript	ENST00000294353.7	protein_coding	3/13		INFO_REALIGN_3_PRIME	chr1	TogoVar
ZYG11B_chr1_52721453_52832336	52776229	A A	AAAAAATA others(29): Show AAAAAATATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00140.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0118 a0001c0001t0001g0118	1	352	0.0028	36	c.952 others(53): Show c.952-3623_952-3622insAAAATATATATATATATATATATATATA TATATATA	ZYG11B	ENSG00000162378.13	transcript	ENST00000294353.7	protein_coding	3/13		INFO_REALIGN_3_PRIME	chr1	TogoVar
ZYG11B_chr1_52721453_52832336	52776229	A A	AATATATA others(29): Show AATATATATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA19063.hp2 NA19063.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0231 a0001c0002t0003g0231	1	352	0.0028	36	c.952 others(53): Show c.952-3608_952-3607insATATATATATATATATATATATATATAT ATATATAT	ZYG11B	ENSG00000162378.13	transcript	ENST00000294353.7	protein_coding	3/13		INFO_REALIGN_3_PRIME	chr1	TogoVar
ZYG11B_chr1_52721453_52832336	52783805	T T	TATATATA others(29): Show TATATATATATATATATATATATATACATACACACAC	intron_variant intron_variant	MODIFIER	NA18906.hp1 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0076 a0001c0001t0076	a0001c0001t0076g0157 a0001c0001t0076g0157	1	352	0.0028	36	c.109 others(55): Show c.1093-1071_1093-1070insTATATATATATATATATATATATACA TACACACACA	ZYG11B	ENSG00000162378.13	transcript	ENST00000294353.7	protein_coding	4/13		INFO_REALIGN_3_PRIME	chr1	TogoVar
ZYG11B_chr1_52721453_52832336	52783924	G G	GTGTATAT others(29): Show GTGTATATACATCTATACATGTGTATATGTACATATA	intron_variant intron_variant	MODIFIER	NA18946.hp2 NA18948.hp2 NA18954.hp2 others(9): Show NA18946.hp2 NA18948.hp2 NA18954.hp2 NA18962.hp1 NA18969.hp1 NA18992.hp1 NA18999.hp2 NA19000.hp1 NA19009.hp1 NA19056.hp1 NA19064.hp2 NA19087.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0082 a0001c0001t0084 a0001c0001t0004 a0001c0001t0082 a0001c0001t0084	a0001c0001t0004g0005 a0001c0001t0004g0014 a0001c0001t0004g0018 others(9): Show a0001c0001t0004g0005 a0001c0001t0004g0014 a0001c0001t0004g0018 a0001c0001t0004g0019 a0001c0001t0004g0020 a0001c0001t0004g0022 a0001c0001t0004g0023 a0001c0001t0004g0025 a0001c0001t0004g0036 a0001c0001t0004g0041 a0001c0001t0082g0008 a0001c0001t0084g0024	12	352	0.0341	36	c.109 others(53): Show c.1093-934_1093-933insGTGTATATGTACATATATGTATATACAT CTATACAT	ZYG11B	ENSG00000162378.13	transcript	ENST00000294353.7	protein_coding	4/13		INFO_REALIGN_3_PRIME	chr1	TogoVar
ZYG11B_chr1_52721453_52832336	52793864	T T	TTTCCTTC others(29): Show TTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG01884.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0066 a0001c0001t0066	a0001c0001t0066g0349 a0001c0001t0066g0349	1	352	0.0028	36	c.133 others(55): Show c.1335-2425_1335-2424insCTTCCTTCCTTCCTTCCTTCCTTCCT TCCTTCCTTC	ZYG11B	ENSG00000162378.13	transcript	ENST00000294353.7	protein_coding	6/13		INFO_REALIGN_3_PRIME	chr1	TogoVar
ZYG11B_chr1_52721453_52832336	52793868	T T	TTCCTTTC others(29): Show TTCCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC	intron_variant intron_variant	MODIFIER	HG03486.hp1 HG03486.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0222 a0001c0001t0005g0222	1	352	0.0028	36	c.133 others(55): Show c.1335-2423_1335-2422insCCTTTCCTTCCTTCCTTCCTTCCTTC CTTCCTTCCT	ZYG11B	ENSG00000162378.13	transcript	ENST00000294353.7	protein_coding	6/13		INFO_REALIGN_3_PRIME	chr1	TogoVar
ZYG11B_chr1_52721453_52832336	52793868	T T	TTTCCTTC others(29): Show TTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC	intron_variant intron_variant	MODIFIER	HG01261.hp1 HG02258.hp1 HG06807.hp1 HG01261.hp1 HG02258.hp1 HG06807.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0006 a0001c0001t0008 a0001c0001t0005 a0001c0001t0006 a0001c0001t0008	a0001c0001t0005g0213 a0001c0001t0006g0186 a0001c0001t0008g0162 a0001c0001t0005g0213 a0001c0001t0006g0186 a0001c0001t0008g0162	3	352	0.0085	36	c.133 others(55): Show c.1335-2390_1335-2389insCCTTCCTTCCTTCCTTCCTTCCTTCC TTCCTTCCTT	ZYG11B	ENSG00000162378.13	transcript	ENST00000294353.7	protein_coding	6/13		INFO_REALIGN_3_PRIME	chr1	TogoVar
ZYG11B_chr1_52721453_52832336	52793868	T T	TTTCTTTC others(29): Show TTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC	intron_variant intron_variant	MODIFIER	HG02083.hp2 HG02132.hp1 HG02132.hp2 others(4): Show HG02083.hp2 HG02132.hp1 HG02132.hp2 HG02155.hp1 HG02622.hp1 HG03516.hp2 NA18944.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0005 a0001c0001t0010 a0001c0001t0002 a0001c0001t0005 a0001c0001t0010	a0001c0001t0002g0269 a0001c0001t0002g0293 a0001c0001t0002g0296 others(4): Show a0001c0001t0002g0269 a0001c0001t0002g0293 a0001c0001t0002g0296 a0001c0001t0002g0330 a0001c0001t0002g0332 a0001c0001t0005g0346 a0001c0001t0010g0197	7	352	0.0199	36	c.133 others(55): Show c.1335-2421_1335-2420insTTTCCTTCCTTCCTTCCTTCCTTCCT TCCTTCCTTC	ZYG11B	ENSG00000162378.13	transcript	ENST00000294353.7	protein_coding	6/13		INFO_REALIGN_3_PRIME	chr1	TogoVar

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