view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
COL17A1_chr10_104026286_104090880 | 104035821 | T | TGTGTGTA others(29): Show |
intron_variant | MODIFIER | HG02145.hp2 HG02922.hp1 NA18906.hp2 others(1): Show |
a0006a0007a0027 | a0006c0008a0006c0041a0007c0036others(1): Show | a0006c0008t0002a0006c0041t0002a0007c0036t0002others(1): Show | a0006c0008t0002g0254 a0006c0041t0002g0289 a0007c0036t0002g0280 others(1): Show |
4 | 334 | 0.0120 | 36 | c.341 others(53): Show |
COL17A1 | ENSG00000065618.21 | transcript | ENST00000648076.2 | protein_coding | 48/55 | chr10 | TogoVar | |||||||
COL18A1_chr21_45400165_45518720 | 45435307 | G | GGGGGTGG others(29): Show |
intron_variant | MODIFIER | HG02258.hp2 HG02280.hp1 HG02572.hp2 others(3): Show |
a0008a0020a0021others(1): Show | a0008c0038a0008c0101a0020c0093others(2): Show | a0008c0038t0001a0008c0101t0002a0020c0093t0015others(2): Show | a0008c0038t0001g0054 a0008c0038t0001g0174 a0008c0101t0002g0003 others(3): Show |
6 | 290 | 0.0207 | 36 | c.106 others(55): Show |
COL18A1 | ENSG00000182871.16 | transcript | ENST00000651438.1 | protein_coding | 2/41 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | ||||||
COL18A1_chr21_45400165_45518720 | 45437463 | C | CACAGGCA others(29): Show |
intron_variant | MODIFIER | HG02622.hp2 NA19057.hp1 |
a0001a0002 | a0001c0001a0002c0012 | a0001c0001t0001a0002c0012t0004 | a0001c0001t0001g0126 a0002c0012t0004g0180 |
2 | 280 | 0.0071 | 36 | c.107 others(55): Show |
COL18A1 | ENSG00000182871.16 | transcript | ENST00000651438.1 | protein_coding | 2/41 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | ||||||
COL18A1_chr21_45400165_45518720 | 45437550 | A | ACACACAC others(29): Show |
intron_variant | MODIFIER | HG02622.hp2 HG02965.hp1 HG03041.hp1 others(1): Show |
a0002 | a0002c0012a0002c0020a0002c0021 | a0002c0012t0004a0002c0020t0003a0002c0021t0002 | a0002c0012t0004g0180 a0002c0020t0003g0144 a0002c0021t0002g0001 others(1): Show |
4 | 286 | 0.0140 | 36 | c.107 others(55): Show |
COL18A1 | ENSG00000182871.16 | transcript | ENST00000651438.1 | protein_coding | 2/41 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | ||||||
COL18A1_chr21_45400165_45518720 | 45437634 | T | TCACACAG others(29): Show |
intron_variant | MODIFIER | HG03654.hp1 HG04184.hp1 |
a0006 | a0006c0016a0006c0048 | a0006c0016t0002a0006c0048t0002 | a0006c0016t0002g0292 a0006c0048t0002g0087 |
2 | 259 | 0.0077 | 36 | c.107 others(55): Show |
COL18A1 | ENSG00000182871.16 | transcript | ENST00000651438.1 | protein_coding | 2/41 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | ||||||
COL18A1_chr21_45400165_45518720 | 45442878 | G | GCTGATGT others(29): Show |
intron_variant | MODIFIER | HG00423.hp1 HG00544.hp2 HG00609.hp1 others(54): Show |
a0001a0003a0009others(2): Show | a0001c0001a0001c0002a0001c0003others(14): Show | a0001c0001t0001a0001c0002t0002a0001c0003t0001others(18): Show | a0001c0001t0001g0021 a0001c0001t0001g0107 a0001c0001t0001g0136 others(54): Show |
57 | 290 | 0.1966 | 36 | c.107 others(55): Show |
COL18A1 | ENSG00000182871.16 | transcript | ENST00000651438.1 | protein_coding | 2/41 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | ||||||
COL18A1_chr21_45400165_45518720 | 45443135 | C | CGGCGGTG others(29): Show |
intron_variant | MODIFIER | HG02970.hp2 HG03195.hp1 |
a0001 | a0001c0035 | a0001c0035t0001 | a0001c0035t0001g0033 a0001c0035t0001g0145 |
2 | 290 | 0.0069 | 36 | c.107 others(55): Show |
COL18A1 | ENSG00000182871.16 | transcript | ENST00000651438.1 | protein_coding | 2/41 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | ||||||
COL18A1_chr21_45400165_45518720 | 45500879 | T | TGTGTGTG others(29): Show |
intron_variant | MODIFIER | HG02970.hp1 | a0001 | a0001c0077 | a0001c0077t0004 | a0001c0077t0004g0027 | 1 | 276 | 0.0036 | 36 | c.268 others(55): Show |
COL18A1 | ENSG00000182871.16 | transcript | ENST00000651438.1 | protein_coding | 32/41 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | ||||||
COL18A1_chr21_45400165_45518720 | 45501012 | G | GAGTGTGG others(29): Show |
intron_variant | MODIFIER | HG02145.hp1 HG02258.hp2 HG02280.hp1 others(3): Show |
a0001a0008a0020others(1): Show | a0001c0039a0008c0038a0008c0101others(2): Show | a0001c0039t0001a0008c0038t0001a0008c0101t0002others(2): Show | a0001c0039t0001g0143 a0008c0038t0001g0054 a0008c0038t0001g0174 others(3): Show |
6 | 132 | 0.0455 | 36 | c.268 others(55): Show |
COL18A1 | ENSG00000182871.16 | transcript | ENST00000651438.1 | protein_coding | 32/41 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | ||||||
COL21A1_chr6_56051590_56252580 | 56098598 | T | TATATAAA others(29): Show |
intron_variant | MODIFIER | HG02257.hp1 HG02486.hp1 |
a0002 | a0002c0008 | a0002c0008t0001a0002c0008t0006 | a0002c0008t0001g0100 a0002c0008t0006g0021 |
2 | 215 | 0.0093 | 36 | c.181 others(55): Show |
COL21A1 | ENSG00000124749.18 | transcript | ENST00000244728.10 | protein_coding | 17/29 | chr6 | TogoVar | |||||||
COL21A1_chr6_56051590_56252580 | 56098664 | T | TATAAATA others(29): Show |
intron_variant | MODIFIER | NA18953.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0210 | 1 | 191 | 0.0052 | 36 | c.181 others(55): Show |
COL21A1 | ENSG00000124749.18 | transcript | ENST00000244728.10 | protein_coding | 17/29 | chr6 | TogoVar | |||||||
COL21A1_chr6_56051590_56252580 | 56098700 | T | TATATGTA others(29): Show |
intron_variant | MODIFIER | HG00099.hp1 NA18971.hp2 NA18981.hp2 others(1): Show |
a0003 | a0003c0005 | a0003c0005t0007a0003c0005t0014 | a0003c0005t0007g0119 a0003c0005t0007g0121 a0003c0005t0007g0201 others(1): Show |
4 | 247 | 0.0162 | 36 | c.181 others(55): Show |
COL21A1 | ENSG00000124749.18 | transcript | ENST00000244728.10 | protein_coding | 17/29 | chr6 | TogoVar | |||||||
COL22A1_chr8_138583235_138919041 | 138643647 | T | TAGATAGA others(29): Show |
intron_variant | MODIFIER | HG02055.hp1 | a0001 | a0001c0012 | a0001c0012t0002 | a0001c0012t0002g0061 | 1 | 48 | 0.0208 | 36 | c.350 others(55): Show |
COL22A1 | ENSG00000169436.18 | transcript | ENST00000303045.11 | protein_coding | 47/64 | chr8 | TogoVar | |||||||
COL22A1_chr8_138583235_138919041 | 138676454 | A | AAAGAAAG others(29): Show |
intron_variant | MODIFIER | HG00597.hp1 HG00741.hp2 HG01167.hp2 others(9): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0002a0001c0006others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(7): Show | a0001c0001t0001g0057 a0001c0001t0001g0083 a0001c0001t0001g0130 others(9): Show |
12 | 97 | 0.1237 | 36 | c.315 others(53): Show |
COL22A1 | ENSG00000169436.18 | transcript | ENST00000303045.11 | protein_coding | 41/64 | chr8 | TogoVar | |||||||
COL22A1_chr8_138583235_138919041 | 138741956 | G | GTGATGGT others(29): Show |
intron_variant | MODIFIER | HG02647.hp2 | a0001 | a0001c0008 | a0001c0008t0002 | a0001c0008t0002g0134 | 1 | 156 | 0.0064 | 36 | c.208 others(55): Show |
COL22A1 | ENSG00000169436.18 | transcript | ENST00000303045.11 | protein_coding | 22/64 | chr8 | TogoVar | |||||||
COL23A1_chr5_178232618_178595393 | 178258262 | T | TATATATA others(29): Show |
intron_variant | MODIFIER | HG02486.hp2 HG03654.hp2 |
a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0019 a0002c0002t0001g0031 |
2 | 139 | 0.0144 | 36 | c.730 others(51): Show |
COL23A1 | ENSG00000050767.18 | transcript | ENST00000390654.8 | protein_coding | 12/28 | chr5 | TogoVar | |||||||
COL23A1_chr5_178232618_178595393 | 178258262 | T | TATATATA others(29): Show |
intron_variant | MODIFIER | HG02055.hp1 HG03704.hp2 NA19005.hp2 |
a0002 | a0002c0002a0002c0003 | a0002c0002t0001a0002c0002t0002a0002c0003t0006 | a0002c0002t0001g0014 a0002c0002t0002g0149 a0002c0003t0006g0229 |
3 | 140 | 0.0214 | 36 | c.730 others(51): Show |
COL23A1 | ENSG00000050767.18 | transcript | ENST00000390654.8 | protein_coding | 12/28 | chr5 | TogoVar | |||||||
COL23A1_chr5_178232618_178595393 | 178269458 | T | TCCATCCA others(29): Show |
intron_variant | MODIFIER | HG00408.hp1 HG03017.hp1 HG03209.hp1 |
a0001a0002 | a0001c0001a0002c0009 | a0001c0001t0003a0001c0001t0004a0002c0009t0008 | a0001c0001t0003g0194 a0001c0001t0004g0021 a0002c0009t0008g0235 |
3 | 234 | 0.0128 | 36 | c.469 others(51): Show |
COL23A1 | ENSG00000050767.18 | transcript | ENST00000390654.8 | protein_coding | 6/28 | chr5 | TogoVar | |||||||
COL23A1_chr5_178232618_178595393 | 178302457 | C | CGGAGCAC others(29): Show |
intron_variant | MODIFIER | HG02486.hp1 HG02922.hp2 HG03098.hp1 |
a0001a0002a0003 | a0001c0001a0002c0002a0003c0004 | a0001c0001t0003a0002c0002t0005a0003c0004t0005 | a0001c0001t0003g0215 a0002c0002t0005g0160 a0003c0004t0005g0132 |
3 | 102 | 0.0294 | 36 | c.406 others(53): Show |
COL23A1 | ENSG00000050767.18 | transcript | ENST00000390654.8 | protein_coding | 3/28 | chr5 | TogoVar | |||||||
COL23A1_chr5_178232618_178595393 | 178523201 | T | TACACATA others(29): Show |
intron_variant | MODIFIER | NA19065.hp1 | a0001 | a0001c0001 | a0001c0001t0004 | a0001c0001t0004g0200 | 1 | 92 | 0.0109 | 36 | c.361 others(55): Show |
COL23A1 | ENSG00000050767.18 | transcript | ENST00000390654.8 | protein_coding | 2/28 | chr5 | TogoVar | |||||||
COL24A1_chr1_85724233_86161772 | 85799211 | A | AAAAAAAA others(29): Show |
intron_variant | MODIFIER | HG01169.hp2 HG01243.hp1 HG02083.hp2 others(6): Show |
a0001a0002a0003others(3): Show | a0001c0001a0002c0016a0002c0019others(4): Show | a0001c0001t0002a0002c0016t0006a0002c0019t0003others(5): Show | a0001c0001t0002g0158 a0002c0016t0006g0013 a0002c0019t0003g0066 others(6): Show |
9 | 45 | 0.2000 | 36 | c.395 others(57): Show |
COL24A1 | ENSG00000171502.15 | transcript | ENST00000370571.7 | protein_coding | 47/59 | chr1 | TogoVar | |||||||
COL24A1_chr1_85724233_86161772 | 85799211 | A | AAAAGAAA others(29): Show |
intron_variant | MODIFIER | HG02886.hp1 | a0003 | a0003c0003 | a0003c0003t0004 | a0003c0003t0004g0131 | 1 | 37 | 0.0270 | 36 | c.395 others(57): Show |
COL24A1 | ENSG00000171502.15 | transcript | ENST00000370571.7 | protein_coding | 47/59 | chr1 | TogoVar | |||||||
COL24A1_chr1_85724233_86161772 | 85858621 | C | CTCCTTCC others(29): Show |
intron_variant | MODIFIER | HG03579.hp2 NA18974.hp1 |
a0014a0043 | a0014c0020a0043c0035 | a0014c0020t0002a0043c0035t0015 | a0014c0020t0002g0174 a0043c0035t0015g0029 |
2 | 62 | 0.0323 | 36 | c.330 others(55): Show |
COL24A1 | ENSG00000171502.15 | transcript | ENST00000370571.7 | protein_coding | 37/59 | chr1 | TogoVar | |||||||
COL24A1_chr1_85724233_86161772 | 85997055 | G | GTGTGTGT others(29): Show |
intron_variant | MODIFIER | NA18970.hp1 | a0023 | a0023c0026 | a0023c0026t0001 | a0023c0026t0001g0037 | 1 | 121 | 0.0083 | 36 | c.231 others(55): Show |
COL24A1 | ENSG00000171502.15 | transcript | ENST00000370571.7 | protein_coding | 19/59 | chr1 | TogoVar | |||||||
COL24A1_chr1_85724233_86161772 | 85997055 | G | GTGTGTGT others(29): Show |
intron_variant | MODIFIER | NA20752.hp2 | a0008 | a0008c0006 | a0008c0006t0001 | a0008c0006t0001g0059 | 1 | 121 | 0.0083 | 36 | c.231 others(55): Show |
COL24A1 | ENSG00000171502.15 | transcript | ENST00000370571.7 | protein_coding | 19/59 | chr1 | TogoVar | |||||||
COL24A1_chr1_85724233_86161772 | 85997055 | G | GTGTGTGT others(29): Show |
intron_variant | MODIFIER | HG00639.hp2 HG01192.hp1 HG02056.hp2 others(4): Show |
a0001a0002a0006others(1): Show | a0001c0001a0001c0005a0002c0007others(3): Show | a0001c0001t0001a0001c0005t0001a0002c0007t0002others(3): Show | a0001c0001t0001g0136 a0001c0005t0001g0185 a0002c0007t0002g0084 others(4): Show |
7 | 127 | 0.0551 | 36 | c.231 others(55): Show |
COL24A1 | ENSG00000171502.15 | transcript | ENST00000370571.7 | protein_coding | 19/59 | chr1 | TogoVar | |||||||
COL24A1_chr1_85724233_86161772 | 85997055 | G | GTGTGTGT others(29): Show |
intron_variant | MODIFIER | HG01169.hp1 HG01496.hp2 HG02559.hp1 others(2): Show |
a0001a0013 | a0001c0001a0001c0041a0013c0018 | a0001c0001t0002a0001c0041t0004a0013c0018t0004 | a0001c0001t0002g0161 a0001c0041t0004g0148 a0013c0018t0004g0061 others(2): Show |
5 | 125 | 0.0400 | 36 | c.231 others(55): Show |
COL24A1 | ENSG00000171502.15 | transcript | ENST00000370571.7 | protein_coding | 19/59 | chr1 | TogoVar | |||||||
COL25A1_chr4_108803725_109307658 | 108835861 | C | CTTTTTTT others(29): Show |
intron_variant | MODIFIER | HG01891.hp1 | a0001 | a0001c0004 | a0001c0004t0001 | a0001c0004t0001g0043 | 1 | 19 | 0.0526 | 36 | c.165 others(55): Show |
COL25A1 | ENSG00000188517.17 | transcript | ENST00000399132.6 | protein_coding | 31/37 | chr4 | TogoVar | |||||||
COL26A1_chr7_101357875_101564024 | 101385367 | G | GTATATAT others(29): Show |
intron_variant | MODIFIER | NA19081.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0131 | 1 | 128 | 0.0078 | 36 | c.158 others(55): Show |
COL26A1 | ENSG00000160963.14 | transcript | ENST00000313669.12 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
COL28A1_chr7_7352875_7540873 | 7374038 | A | AAAAAAAA others(29): Show |
intron_variant | MODIFIER | HG01109.hp1 | a0011 | a0011c0016 | a0011c0016t0001 | a0011c0016t0001g0016 | 1 | 56 | 0.0179 | 36 | c.236 others(53): Show |
COL28A1 | ENSG00000215018.10 | transcript | ENST00000399429.8 | protein_coding | 31/34 | chr7 | TogoVar | |||||||
COL4A1_chr13_110143963_110312157 | 110219848 | A | ATATATGT others(29): Show |
intron_variant | MODIFIER | NA18974.hp1 | a0004 | a0004c0017 | a0004c0017t0001 | a0004c0017t0001g0093 | 1 | 335 | 0.0030 | 36 | c.145 others(53): Show |
COL4A1 | ENSG00000187498.16 | transcript | ENST00000375820.10 | protein_coding | 2/51 | chr13 | TogoVar | |||||||
COL4A2_chr13_110302284_110518209 | 110355580 | G | GTGGGGGG others(29): Show |
intron_variant | MODIFIER | HG00140.hp2 HG00323.hp2 HG00639.hp2 others(6): Show |
a0002a0003a0004others(3): Show | a0002c0006a0002c0017a0003c0010others(5): Show | a0002c0006t0005a0002c0017t0002a0003c0010t0004others(5): Show | a0002c0006t0005g0157 a0002c0017t0002g0317 a0003c0010t0004g0268 others(6): Show |
9 | 246 | 0.0366 | 36 | c.100 others(53): Show |
COL4A2 | ENSG00000134871.19 | transcript | ENST00000360467.7 | protein_coding | 3/47 | chr13 | TogoVar | |||||||
COL4A2_chr13_110302284_110518209 | 110355580 | G | GTGGGGGT others(29): Show |
intron_variant | MODIFIER | HG01175.hp2 NA20752.hp1 |
a0001a0002 | a0001c0016a0002c0086 | a0001c0016t0007a0002c0086t0002 | a0001c0016t0007g0219 a0002c0086t0002g0279 |
2 | 239 | 0.0084 | 36 | c.100 others(53): Show |
COL4A2 | ENSG00000134871.19 | transcript | ENST00000360467.7 | protein_coding | 3/47 | chr13 | TogoVar | |||||||
COL4A2_chr13_110302284_110518209 | 110355670 | C | CTGTGTGT others(29): Show |
intron_variant | MODIFIER | HG01192.hp2 | a0009 | a0009c0032 | a0009c0032t0003 | a0009c0032t0003g0123 | 1 | 366 | 0.0027 | 36 | c.100 others(53): Show |
COL4A2 | ENSG00000134871.19 | transcript | ENST00000360467.7 | protein_coding | 3/47 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | ||||||
COL4A2_chr13_110302284_110518209 | 110509245 | T | TTATATAT others(29): Show |
intron_variant | MODIFIER | HG04184.hp1 NA18943.hp1 |
a0002 | a0002c0006a0002c0062 | a0002c0006t0006a0002c0062t0047 | a0002c0006t0006g0066 a0002c0062t0047g0299 |
2 | 160 | 0.0125 | 36 | c.488 others(55): Show |
COL4A2 | ENSG00000134871.19 | transcript | ENST00000360467.7 | protein_coding | 47/47 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | ||||||
COL4A3_chr2_227159624_227319792 | 227202936 | T | TATATATA others(29): Show |
intron_variant | MODIFIER | HG03239.hp2 | a0003 | a0003c0011 | a0003c0011t0020 | a0003c0011t0020g0302 | 1 | 219 | 0.0046 | 36 | c.88- others(53): Show |
COL4A3 | ENSG00000169031.21 | transcript | ENST00000396578.8 | protein_coding | 1/51 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
COL4A3_chr2_227159624_227319792 | 227203018 | T | TATATATA others(29): Show |
intron_variant | MODIFIER | HG01167.hp2 HG01433.hp2 NA18954.hp2 |
a0001a0009 | a0001c0001a0009c0008 | a0001c0001t0001a0009c0008t0001 | a0001c0001t0001g0196 a0001c0001t0001g0280 a0009c0008t0001g0077 |
3 | 202 | 0.0149 | 36 | c.88- others(53): Show |
COL4A3 | ENSG00000169031.21 | transcript | ENST00000396578.8 | protein_coding | 1/51 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
COL4A3_chr2_227159624_227319792 | 227203112 | T | TATATATA others(29): Show |
intron_variant | MODIFIER | HG02155.hp1 | a0003 | a0003c0002 | a0003c0002t0003 | a0003c0002t0003g0092 | 1 | 195 | 0.0051 | 36 | c.88- others(53): Show |
COL4A3 | ENSG00000169031.21 | transcript | ENST00000396578.8 | protein_coding | 1/51 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
COL4A3_chr2_227159624_227319792 | 227203270 | T | TATATATA others(29): Show |
intron_variant | MODIFIER | NA18612.hp1 NA18948.hp2 NA18954.hp1 others(5): Show |
a0001a0002a0003others(2): Show | a0001c0001a0002c0004a0003c0002others(2): Show | a0001c0001t0001a0002c0004t0003a0003c0002t0003others(2): Show | a0001c0001t0001g0170 a0001c0001t0001g0199 a0001c0001t0001g0200 others(5): Show |
8 | 322 | 0.0248 | 36 | c.88- others(53): Show |
COL4A3 | ENSG00000169031.21 | transcript | ENST00000396578.8 | protein_coding | 1/51 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
COL4A3_chr2_227159624_227319792 | 227249230 | A | ATATATAT others(29): Show |
intron_variant | MODIFIER | HG03710.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0193 | 1 | 56 | 0.0179 | 36 | c.546 others(51): Show |
COL4A3 | ENSG00000169031.21 | transcript | ENST00000396578.8 | protein_coding | 9/51 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
COL4A3_chr2_227159624_227319792 | 227249230 | A | ATATATAT others(29): Show |
intron_variant | MODIFIER | NA18999.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0108 | 1 | 56 | 0.0179 | 36 | c.546 others(51): Show |
COL4A3 | ENSG00000169031.21 | transcript | ENST00000396578.8 | protein_coding | 9/51 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
COL4A3_chr2_227159624_227319792 | 227249230 | A | ATATATAT others(29): Show |
intron_variant | MODIFIER | NA18953.hp1 NA19091.hp2 |
a0001a0005 | a0001c0001a0005c0005 | a0001c0001t0002a0005c0005t0002 | a0001c0001t0002g0207 a0005c0005t0002g0120 |
2 | 57 | 0.0351 | 36 | c.546 others(51): Show |
COL4A3 | ENSG00000169031.21 | transcript | ENST00000396578.8 | protein_coding | 9/51 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
COL4A4_chr2_226997714_227169205 | 227089611 | A | ATATATAT others(29): Show |
intron_variant | MODIFIER | NA18522.hp1 | a0007 | a0007c0006 | a0007c0006t0004 | a0007c0006t0004g0174 | 1 | 273 | 0.0037 | 36 | c.145 others(53): Show |
COL4A4 | ENSG00000081052.14 | transcript | ENST00000396625.5 | protein_coding | 21/47 | chr2 | TogoVar | |||||||
COL5A1_chr9_134636803_134849843 | 134747832 | C | CATATGCA others(29): Show |
intron_variant | MODIFIER | HG02155.hp1 | a0009 | a0009c0030 | a0009c0030t0001 | a0009c0030t0001g0137 | 1 | 129 | 0.0078 | 36 | c.149 others(55): Show |
COL5A1 | ENSG00000130635.17 | transcript | ENST00000371817.8 | protein_coding | 11/65 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | ||||||
COL5A2_chr2_189026898_189184761 | 189094588 | G | GACACACA others(29): Show |
intron_variant | MODIFIER | HG01081.hp1 HG01255.hp2 HG01261.hp2 others(10): Show |
a0001a0003a0005 | a0001c0001a0003c0014a0005c0013 | a0001c0001t0001a0001c0001t0013a0003c0014t0001others(1): Show | a0001c0001t0001g0066 a0001c0001t0001g0073 a0001c0001t0001g0082 others(10): Show |
13 | 32 | 0.4063 | 36 | c.457 others(53): Show |
COL5A2 | ENSG00000204262.14 | transcript | ENST00000374866.9 | protein_coding | 6/53 | chr2 | TogoVar | |||||||
COL5A3_chr19_9954561_10015504 | 9970020 | T | TCTGTAAG others(29): Show |
intron_variant | MODIFIER | HG03831.hp2 | a0066 | a0066c0128 | a0066c0128t0001 | a0066c0128t0001g0353 | 1 | 408 | 0.0025 | 36 | c.393 others(51): Show |
COL5A3 | ENSG00000080573.7 | transcript | ENST00000264828.4 | protein_coding | 54/66 | chr19 | TogoVar | |||||||
COL5A3_chr19_9954561_10015504 | 9970092 | T | TGGGGTGA others(29): Show |
intron_variant | MODIFIER | HG00642.hp1 HG02004.hp1 HG02809.hp2 others(13): Show |
a0005a0006a0007others(2): Show | a0005c0021a0005c0032a0006c0029others(4): Show | a0005c0021t0008a0005c0032t0007a0005c0032t0008others(5): Show | a0005c0021t0008g0003 a0005c0021t0008g0293 a0005c0021t0008g0296 others(12): Show |
16 | 224 | 0.0714 | 36 | c.393 others(53): Show |
COL5A3 | ENSG00000080573.7 | transcript | ENST00000264828.4 | protein_coding | 54/66 | chr19 | TogoVar | |||||||
COL6A1_chr21_45976770_46010048 | 46005444 | T | TAGGAAGA others(29): Show |
downstream_gene_variant | MODIFIER | HG00280.hp2 HG00733.hp2 HG01106.hp2 others(14): Show |
a0001a0002a0003others(2): Show | a0001c0003a0001c0007a0001c0010others(7): Show | a0001c0003t0003a0001c0007t0001a0001c0010t0005others(9): Show | a0001c0003t0003g0033 a0001c0007t0001g0001 a0001c0010t0005g0072 others(14): Show |
17 | 124 | 0.1371 | 36 | c.*14 others(47): Show |
COL6A1 | ENSG00000142156.16 | transcript | ENST00000361866.8 | protein_coding | 397 | chr21 | TogoVar | |||||||
COL6A2_chr21_46093112_46134801 | 46134443 | T | TAGGGTCA others(29): Show |
downstream_gene_variant | MODIFIER | HG03516.hp1 | a0003 | a0003c0004 | a0003c0004t0002 | a0003c0004t0002g0046 | 1 | 300 | 0.0033 | 36 | c.*49 others(47): Show |
COL6A2 | ENSG00000142173.17 | transcript | ENST00000397763.6 | protein_coding | 4643 | chr21 | TogoVar | |||||||
COL6A2_chr21_46093112_46134801 | 46134491 | C | CAGGGTGA others(29): Show |
downstream_gene_variant | MODIFIER | HG01109.hp1 NA20805.hp2 |
a0003 | a0003c0004 | a0003c0004t0004 | a0003c0004t0004g0195 a0003c0004t0004g0216 |
2 | 322 | 0.0062 | 36 | c.*50 others(47): Show |
COL6A2 | ENSG00000142173.17 | transcript | ENST00000397763.6 | protein_coding | 4691 | chr21 | TogoVar |