Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
WDR43_chr2_28889667_28953219	28950842	C C	CTTTTTTT others(30): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02109.hp2 HG02109.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0118 a0001c0001t0001g0118	1	332	0.0030	37	c.40 others(48): Show c.4063_*4064insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT TTT	WDR43	ENSG00000163811.12	transcript	ENST00000407426.8	protein_coding		2624		chr2	TogoVar
WDR45B_chr17_82609562_82653444	82648849	A A	AGGGGGAG others(30): Show AGGGGGAGGGGCGGGGAGGAGGGGGAGGGGCGGGGAGG	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19043.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0017 a0001c0001t0017	a0001c0001t0017g0357 a0001c0001t0017g0357	1	382	0.0026	37	c.-51 others(46): Show c.-510_-509insCCTCCCCGCCCCTCCCCCTCCTCCCCGCCCCTCCCC C	WDR45B	ENSG00000141580.16	transcript	ENST00000392325.9	protein_coding		406		chr17	TogoVar
WDR48_chr3_39047016_39101664	39071192	G G	GGGGGGGG others(30): Show GGGGGGGGTGGGGGGGGGAAATAAAAAAAAAATAATCT	intron_variant intron_variant	MODIFIER	NA18997.hp1 NA18997.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0135 a0001c0001t0001g0135	1	358	0.0028	37	c.672 others(54): Show c.672+1448_672+1449insGGGGGGGTGGGGGGGGGAAATAAAAAAA AAATAATCT	WDR48	ENSG00000114742.14	transcript	ENST00000302313.10	protein_coding	7/18			chr3	TogoVar
WDR49_chr3_167473684_167658942	167545509	T T	TATATATA others(30): Show TATATATATATATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02027.hp1 HG02027.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0203 a0002c0002t0002g0203	1	210	0.0048	37	c.182 others(56): Show c.1824-8510_1824-8509insTATATATATATATATATATATATATA TATATATATAT	WDR49	ENSG00000174776.12	transcript	ENST00000682715.1	protein_coding	10/18			chr3	TogoVar
WDR4_chr21_42844226_42884539	42845471	T T	TGTAGGCT others(30): Show TGTAGGCTGGCTGAGTGCCCTCGTGAGCTTGCGGCACA	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19087.hp2 NA19087.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0091 a0001c0001t0001g0091	1	400	0.0025	37	c.45 others(48): Show c.4541_*4577dupTGTGCCGCAAGCTCACGAGGGCACTCAGCCAGCC TAC	WDR4	ENSG00000160193.12	transcript	ENST00000398208.3	protein_coding		3754		chr21	TogoVar
WDR59_chr16_74866362_74990123	74906313	C C	CAAAAAAA others(30): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01258.hp1 HG01496.hp1 HG01496.hp2 others(3): Show HG01258.hp1 HG01496.hp1 HG01496.hp2 HG01516.hp2 HG01975.hp2 HG02056.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 a0001c0001t0010	a0001c0001t0001g0081 a0001c0001t0001g0232 a0001c0001t0002g0048 others(3): Show a0001c0001t0001g0081 a0001c0001t0001g0232 a0001c0001t0002g0048 a0001c0001t0004g0166 a0001c0001t0005g0017 a0001c0001t0010g0218	6	294	0.0204	37	c.171 others(56): Show c.1713-2214_1713-2213insTTTTTTTTTTTTTTTTTTTTTTTTTT TTTTTTTTTTT	WDR59	ENSG00000103091.15	transcript	ENST00000262144.11	protein_coding	17/25			chr16	TogoVar
WDR86_chr7_151376124_151415038	151402070	A A	AAAAAAAA others(30): Show AAAAAAAAATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02818.hp2 HG02818.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0412 a0001c0001t0001g0412	1	458	0.0022	37	c.164 others(54): Show c.164-1830_164-1829insATATATATATATATATATATATATATAT ATTTTTTTT	WDR86	ENSG00000187260.16	transcript	ENST00000334493.11	protein_coding	1/5			chr7	TogoVar
WDR87_chr19_37879823_37911594	37881138	T T	TATTATAT others(30): Show TATTATATATATATATATAGAGAGAGAGAGAGAGAGAG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02071.hp1 HG02071.hp2 HG02273.hp1 HG02071.hp1 HG02071.hp2 HG02273.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0001 a0001c0001t0002g0054 a0001c0001t0002g0001 a0001c0001t0002g0054	3	330	0.0091	37	c.37 others(48): Show c.3793_*3794insCTCTCTCTCTCTCTCTCTCTATATATATATATAT AAT	WDR87	ENSG00000171804.11	transcript	ENST00000447313.7	protein_coding		3684		chr19	TogoVar
WDR87_chr19_37879823_37911594	37881138	T T	TATTATAT others(30): Show TATTATATATATATATATATAGAGAGAGAGAGAGAGAG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00423.hp1 HG02300.hp2 HG02559.hp2 HG00423.hp1 HG02300.hp2 HG02559.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0001 a0001c0001t0002g0006 a0001c0001t0002g0047 a0001c0001t0002g0001 a0001c0001t0002g0006 a0001c0001t0002g0047	3	330	0.0091	37	c.37 others(48): Show c.3793_*3794insCTCTCTCTCTCTCTCTCTATATATATATATATAT AAT	WDR87	ENSG00000171804.11	transcript	ENST00000447313.7	protein_coding		3684		chr19	TogoVar
WDR87_chr19_37879823_37911594	37881138	T T	TATTTTAT others(30): Show TATTTTATATATATATATATATATATATATAGAGAGAG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02083.hp1 HG02083.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0069 a0001c0001t0002g0069	1	330	0.0030	37	c.37 others(48): Show c.3793_*3794insCTCTCTCTATATATATATATATATATATATATAA AAT	WDR87	ENSG00000171804.11	transcript	ENST00000447313.7	protein_coding		3684		chr19	TogoVar
WDR90_chr16_644365_672830	661003	C C	CGGCCTCA others(30): Show CGGCCTCAGGCCCCGCCCCCTGTTCGGCCCCTCCCCAG	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00733.hp2 NA18948.hp1 HG00280.hp1 HG00733.hp2 NA18948.hp1	a0001 a0023 a0001 a0023	a0001c0001 a0023c0072 a0001c0001 a0023c0072	a0001c0001t0001 a0023c0072t0001 a0001c0001t0001 a0023c0072t0001	a0001c0001t0001g0211 a0001c0001t0001g0249 a0023c0072t0001g0218 a0001c0001t0001g0211 a0001c0001t0001g0249 a0023c0072t0001g0218	3	376	0.0080	37	c.339 others(52): Show c.3392-48_3392-47insGGCCTCAGGCCCCGCCCCCTGTTCGGCCCC TCCCCAG	WDR90	ENSG00000161996.19	transcript	ENST00000293879.9	protein_coding	28/40			chr16	TogoVar
WDR90_chr16_644365_672830	661003	C C	CGGCCTCA others(30): Show CGGCCTCAGGCCCCGCCCCCTGTTCGGCCCTCCCCAGG	intron_variant intron_variant	MODIFIER	NA18973.hp2 NA18973.hp2	a0005 a0005	a0005c0068 a0005c0068	a0005c0068t0003 a0005c0068t0003	a0005c0068t0003g0195 a0005c0068t0003g0195	1	376	0.0027	37	c.339 others(52): Show c.3392-48_3392-47insGGCCTCAGGCCCCGCCCCCTGTTCGGCCCT CCCCAGG	WDR90	ENSG00000161996.19	transcript	ENST00000293879.9	protein_coding	28/40			chr16	TogoVar
WDR90_chr16_644365_672830	671542	C C	CCACCACA others(30): Show CCACCACAACCCCCCCCCCCCCCCCCAGCAAGTCGGCT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01167.hp1 HG01167.hp1	a0009 a0009	a0009c0016 a0009c0016	a0009c0016t0002 a0009c0016t0002	a0009c0016t0002g0044 a0009c0016t0002g0044	1	376	0.0027	37	c.39 others(48): Show c.3953_*3954insCACCACAACCCCCCCCCCCCCCCCCAGCAAGTCG GCT	WDR90	ENSG00000161996.19	transcript	ENST00000293879.9	protein_coding		3713		chr16	TogoVar
WFDC9_chr20_45602939_45636284	45622119	T T	TATTTACA others(30): Show TATTTACATAATTATTACATAATTAAATAATTTTATTA	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG01070.hp2 HG01071.hp1 others(5): Show HG00642.hp1 HG01070.hp2 HG01071.hp1 HG01975.hp1 HG01978.hp1 HG02004.hp1 HG02293.hp1 NA20300.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0011 a0002c0002t0001g0011	8	398	0.0201	37	c.-15 others(56): Show c.-152-7399_-152-7398insTAATAAAATTATTTAATTATGTAATA ATTATGTAAAT	WFDC9	ENSG00000180205.4	transcript	ENST00000326000.2	protein_coding	1/4			chr20	TogoVar
WFS1_chr4_6264850_6308265	6299548	A A	ATGTGTGT others(30): Show ATGTGTGTGTGTAGGGGTGGGTTGCGTGTGTGTGAATG	intron_variant intron_variant	MODIFIER	HG02647.hp1 HG02922.hp1 HG02647.hp1 HG02922.hp1	a0002 a0002	a0002c0018 a0002c0036 a0002c0018 a0002c0036	a0002c0018t0005 a0002c0036t0005 a0002c0018t0005 a0002c0036t0005	a0002c0018t0005g0124 a0002c0036t0005g0251 a0002c0018t0005g0124 a0002c0036t0005g0251	2	390	0.0051	37	c.862 others(54): Show c.862-1100_862-1099insGTAGGGGTGGGTTGCGTGTGTGTGAATG TGTGTGTGT	WFS1	ENSG00000109501.15	transcript	ENST00000226760.5	protein_coding	7/7		INFO_REALIGN_3_PRIME	chr4	TogoVar
WIF1_chr12_65045626_65126305	65083822	C C	CTTTCCTC others(30): Show CTTTCCTCTCCTCTTTTCTCTTTTCTTTTCTTTTCTTT	intron_variant intron_variant	MODIFIER	HG03195.hp1 HG03669.hp1 HG03195.hp1 HG03669.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0002t0001 a0001c0001t0002 a0001c0002t0001	a0001c0001t0002g0299 a0001c0002t0001g0032 a0001c0001t0002g0299 a0001c0002t0001g0032	2	378	0.0053	37	c.289 others(54): Show c.289-5969_289-5968insAAAGAAAAGAAAAGAAAAGAGAAAAGAG GAGAGGAAA	WIF1	ENSG00000156076.10	transcript	ENST00000286574.9	protein_coding	2/9			chr12	TogoVar
WIF1_chr12_65045626_65126305	65083822	C C	CTTTCCTT others(30): Show CTTTCCTTTCCTCTCCTCTTTTCTCTTTTCTTTTCTTT	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02280.hp1 HG03540.hp1 others(1): Show HG02257.hp2 HG02280.hp1 HG03540.hp1 NA19082.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0285 a0001c0001t0001g0342 a0001c0001t0001g0362 others(1): Show a0001c0001t0001g0285 a0001c0001t0001g0342 a0001c0001t0001g0362 a0001c0001t0003g0361	4	378	0.0106	37	c.289 others(54): Show c.289-5969_289-5968insAAAGAAAAGAAAAGAGAAAAGAGGAGAG GAAAGGAAA	WIF1	ENSG00000156076.10	transcript	ENST00000286574.9	protein_coding	2/9			chr12	TogoVar
WIF1_chr12_65045626_65126305	65083822	C C	CTTTCCTT others(30): Show CTTTCCTTTCCTTTCCTCTCCTCTTTTCTCTTTTCTTT	intron_variant intron_variant	MODIFIER	NA18941.hp2 NA19000.hp2 NA18941.hp2 NA19000.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0341 a0001c0001t0001g0352 a0001c0001t0001g0341 a0001c0001t0001g0352	2	378	0.0053	37	c.289 others(54): Show c.289-5969_289-5968insAAAGAAAAGAGAAAAGAGGAGAGGAAAG GAAAGGAAA	WIF1	ENSG00000156076.10	transcript	ENST00000286574.9	protein_coding	2/9			chr12	TogoVar
WIF1_chr12_65045626_65126305	65083822	C C	CTTTCCTT others(30): Show CTTTCCTTTCCTTTCCTTTCCTCTCCTCTTTTCTCTTT	intron_variant intron_variant	MODIFIER	HG03834.hp1 NA19083.hp2 HG03834.hp1 NA19083.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0340 a0001c0001t0001g0353 a0001c0001t0001g0340 a0001c0001t0001g0353	2	378	0.0053	37	c.289 others(54): Show c.289-5969_289-5968insAAAGAGAAAAGAGGAGAGGAAAGGAAAG GAAAGGAAA	WIF1	ENSG00000156076.10	transcript	ENST00000286574.9	protein_coding	2/9			chr12	TogoVar
WNT7A_chr3_13811258_13885071	13856884	G G	GAAGAAGA others(30): Show GAAGAAGAAGAAAAAGAAGAAGAAGAAGAAGAAGAAGA	intron_variant intron_variant	MODIFIER	HG01192.hp2 HG01192.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0041 a0001c0001t0041	a0001c0001t0041g0251 a0001c0001t0041g0251	1	354	0.0028	37	c.299 others(54): Show c.299-2082_299-2081insTCTTCTTCTTCTTCTTCTTCTTCTTTTT CTTCTTCTT	WNT7A	ENSG00000154764.6	transcript	ENST00000285018.5	protein_coding	2/3			chr3	TogoVar
WNT8A_chr5_138079033_138096541	138091837	A A	AACACTCC others(30): Show AACACTCCAGCCTGGGCAACAGAACTGAGACCCTGACT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03195.hp1 HG03195.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0001 a0001c0002t0001g0001	1	404	0.0025	37	c.76 others(46): Show c.764_*765insACACTCCAGCCTGGGCAACAGAACTGAGACCCTGAC T	WNT8A	ENSG00000061492.12	transcript	ENST00000506684.6	protein_coding		297		chr5	TogoVar
WSCD2_chr12_108124288_108255537	108166761	T T	TTTTTCTT others(30): Show TTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	intron_variant intron_variant	MODIFIER	HG02486.hp1 HG02486.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0016 a0001c0003t0016	a0001c0003t0016g0055 a0001c0003t0016g0055	1	284	0.0035	37	c.-55 others(58): Show c.-551-28518_-551-28517insTCTTTCTTTCTTTCTTTCTTTCTT TCTTTCTTTCTTT	WSCD2	ENSG00000075035.10	transcript	ENST00000547525.6	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr12	TogoVar
WT1_chr11_32382775_32440539	32430432	C C	CAGAGAGA others(30): Show CAGAGAGAGAGAGAGAGGGAGGGGAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG02257.hp1 HG02257.hp1	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0001 a0001c0006t0001	a0001c0006t0001g0212 a0001c0006t0001g0212	1	328	0.0031	37	c.662 others(54): Show c.662-1814_662-1813insCTCTCTCTCTCTCTCCCCTCCCTCTCTC TCTCTCTCT	WT1	ENSG00000184937.16	transcript	ENST00000452863.10	protein_coding	1/9			chr11	TogoVar
WWC1_chr5_168286645_168477303	168339833	T T	TCTTTCTT others(30): Show TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	intron_variant intron_variant	MODIFIER	HG03139.hp1 HG03139.hp1	a0003 a0003	a0003c0026 a0003c0026	a0003c0026t0006 a0003c0026t0006	a0003c0026t0006g0161 a0003c0026t0006g0161	1	254	0.0039	37	c.120 others(56): Show c.120-31591_120-31590insCTTTCTTTCTTTCTTTCTTTCTTTCT TTCTTTCTTTC	WWC1	ENSG00000113645.15	transcript	ENST00000265293.9	protein_coding	1/22			chr5	TogoVar
WWOX_chr16_78094654_79217667	78527991	C C	CTTTTTTT others(30): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA19240.hp1 NA19240.hp1	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0003 a0003c0004t0003	a0003c0004t0003g0101 a0003c0004t0003g0101	1	142	0.0070	37	c.105 others(58): Show c.1056+95264_1056+95265insTTTTTTTTTTTTTTTTTTTTTTTT TTTTTTTTTTTTT	WWOX	ENSG00000186153.19	transcript	ENST00000566780.6	protein_coding	8/8		INFO_REALIGN_3_PRIME	chr16	TogoVar
WWOX_chr16_78094654_79217667	78575068	T T	TATATATA others(30): Show TATATATAAATATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01109.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0071 a0001c0001t0006g0071	1	142	0.0070	37	c.105 others(60): Show c.1056+142323_1056+142324insAATATATATATATATATATATA TATATATAATATATA	WWOX	ENSG00000186153.19	transcript	ENST00000566780.6	protein_coding	8/8		INFO_REALIGN_3_PRIME	chr16	TogoVar
WWOX_chr16_78094654_79217667	78723609	T T	TTTCTTTT others(30): Show TTTCTTTTCCCACACTTCTTCTACCTTGATTCCCAGCC	intron_variant intron_variant	MODIFIER	HG02630.hp2 HG02630.hp2	a0007 a0007	a0007c0008 a0007c0008	a0007c0008t0020 a0007c0008t0020	a0007c0008t0020g0058 a0007c0008t0020g0058	1	142	0.0070	37	c.105 others(60): Show c.1056+290865_1056+290866insCCACACTTCTTCTACCTTGATT CCCAGCCTTCTTTTC	WWOX	ENSG00000186153.19	transcript	ENST00000566780.6	protein_coding	8/8		INFO_REALIGN_3_PRIME	chr16	TogoVar
WWTR1_chr3_149512235_149663025	149622502	G G	GAAGGAAG others(30): Show GAAGGAAGGAAGGAAGAAAGAAAAGAAAGAAAGAAAGA	intron_variant intron_variant	MODIFIER	HG02976.hp1 HG02976.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0185 a0001c0002t0003g0185	1	334	0.0030	37	c.431 others(56): Show c.431+34373_431+34374insTCTTTCTTTCTTTCTTTTCTTTCTTC CTTCCTTCCTT	WWTR1	ENSG00000018408.15	transcript	ENST00000360632.8	protein_coding	2/6			chr3	TogoVar
XIAP_chrX_123855053_123918972	123899145	A A	AAAAAAAA others(30): Show AAAAAAAAAAAAAAAATATATATATATATATATGATTT	intron_variant intron_variant	MODIFIER	HG02148.hp1 NA18946.hp2 NA18951.hp1 others(2): Show HG02148.hp1 NA18946.hp2 NA18951.hp1 NA18962.hp1 NA19002.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0036 a0001c0001t0002g0048 a0001c0001t0002g0060 others(2): Show a0001c0001t0002g0036 a0001c0001t0002g0048 a0001c0001t0002g0060 a0001c0001t0002g0071 a0001c0001t0002g0074	5	286	0.0175	37	c.110 others(56): Show c.1100-1348_1100-1347insAAAAAAAAAAAAAAATATATATATAT ATATATGATTT	XIAP	ENSG00000101966.14	transcript	ENST00000371199.8	protein_coding	5/6			chrX	TogoVar
XIAP_chrX_123855053_123918972	123899145	A A	AAAAAAAA others(30): Show AAAAAAAAAAAAAATATATATATATATATATATGATTT	intron_variant intron_variant	MODIFIER	NA18974.hp1 NA18974.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0016 a0001c0001t0002g0016	1	286	0.0035	37	c.110 others(56): Show c.1100-1348_1100-1347insAAAAAAAAAAAAATATATATATATAT ATATATGATTT	XIAP	ENSG00000101966.14	transcript	ENST00000371199.8	protein_coding	5/6			chrX	TogoVar
XKR4_chr8_55097028_55547054	55247855	C C	CTTTCTTT others(30): Show CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT	intron_variant intron_variant	MODIFIER	HG01433.hp2 HG02004.hp2 NA18949.hp2 HG01433.hp2 HG02004.hp2 NA18949.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0109 a0001c0001t0110 a0001c0001t0005 a0001c0001t0109 a0001c0001t0110	a0001c0001t0005g0124 a0001c0001t0109g0054 a0001c0001t0110g0128 a0001c0001t0005g0124 a0001c0001t0109g0054 a0001c0001t0110g0128	3	182	0.0165	37	c.807 others(58): Show c.807-109820_807-109819insCTTTCTTTCTTTCTTTCTTTCTTT CTTTCTTTCTTTT	XKR4	ENSG00000206579.10	transcript	ENST00000327381.7	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr8	TogoVar
XRCC4_chr5_83072547_83358760	83217358	C C	CAAAAAAA others(30): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02486.hp1 HG03516.hp2 HG02486.hp1 HG03516.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0201 a0001c0002t0001g0202 a0001c0002t0001g0201 a0001c0002t0001g0202	2	262	0.0076	37	c.745 others(56): Show c.745+12456_745+12457insAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAA	XRCC4	ENSG00000152422.16	transcript	ENST00000396027.9	protein_coding	6/7		INFO_REALIGN_3_PRIME	chr5	TogoVar
XRCC6_chr22_41616295_41669041	41649139	A A	AAAAAAAA others(30): Show AAAAAAAAATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00597.hp2 HG00597.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0059 a0001c0001t0001g0059	1	324	0.0031	37	c.961 others(54): Show c.961-1583_961-1582insAAAAAAATATATATATATATATATATAT ATATATATA	XRCC6	ENSG00000196419.13	transcript	ENST00000360079.8	protein_coding	7/12		INFO_REALIGN_3_PRIME	chr22	TogoVar
XRCC6_chr22_41616295_41669041	41649139	A A	AAAAAAAT others(30): Show AAAAAAATATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02027.hp1 HG02027.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0054 a0001c0001t0001g0054	1	324	0.0031	37	c.961 others(54): Show c.961-1583_961-1582insAAAAATATATATATATATATATATATAT ATATATATA	XRCC6	ENSG00000196419.13	transcript	ENST00000360079.8	protein_coding	7/12		INFO_REALIGN_3_PRIME	chr22	TogoVar
XRN2_chr20_21298331_21394825	21366012	A A	ATATATAA others(30): Show ATATATAATATATATAAATATATATTATATTTATAGTT	intron_variant intron_variant	MODIFIER	HG04115.hp2 HG04115.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0255 a0001c0001t0001g0255	1	278	0.0036	37	c.245 others(54): Show c.2456+352_2456+388dupATATATATAAATATATATTATATTTATA GTTTATATA	XRN2	ENSG00000088930.8	transcript	ENST00000377191.5	protein_coding	26/29		INFO_REALIGN_3_PRIME	chr20	TogoVar
YBEY_chr21_46281342_46302751	46298434	C C	CTTTTTTT others(30): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00609.hp1 HG01175.hp2 HG03927.hp2 others(2): Show HG00609.hp1 HG01175.hp2 HG03927.hp2 NA18991.hp1 NA19090.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0004 a0001c0001 a0003c0004	a0001c0001t0001 a0001c0001t0005 a0003c0004t0001 a0001c0001t0001 a0001c0001t0005 a0003c0004t0001	a0001c0001t0001g0046 a0001c0001t0001g0053 a0001c0001t0001g0113 others(2): Show a0001c0001t0001g0046 a0001c0001t0001g0053 a0001c0001t0001g0113 a0001c0001t0005g0093 a0003c0004t0001g0041	5	404	0.0124	37	c.80 others(46): Show c.800_*801insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT T	YBEY	ENSG00000182362.14	transcript	ENST00000397701.9	protein_coding		684		chr21	TogoVar
YJU2B_chr19_13742895_13768289	13767861	C C	CTTTTTTT others(30): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19005.hp1 NA19005.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0047 a0001c0001t0001g0047	1	432	0.0023	37	c.47 others(48): Show c.4793_*4794insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT TTT	YJU2B	ENSG00000104957.14	transcript	ENST00000221554.13	protein_coding		4573		chr19	TogoVar
YJU2_chr19_4242080_4274088	4246080	G G	GGAGGTTG others(30): Show GGAGGTTGCAGTGAGCCAAGATCGCACCACTGGAGGCA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19064.hp2 NA19064.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0070 a0001c0002t0001g0070	1	384	0.0026	37	c.-10 others(48): Show c.-1067_-1066insGAGGTTGCAGTGAGCCAAGATCGCACCACTGGAG GCA	YJU2	ENSG00000105248.16	transcript	ENST00000262962.12	protein_coding		999		chr19	TogoVar
YPEL2_chr17_59326655_59406729	59405456	A A	ATATATAT others(30): Show ATATATATATATATATATATATATATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01123.hp1 HG01123.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0082 a0001c0001t0001g0082	1	350	0.0029	37	c.82 others(48): Show c.8266_*8267insTATATATATATATATATATATATATATATATATA TAT	YPEL2	ENSG00000175155.11	transcript	ENST00000312655.9	protein_coding		3728		chr17	TogoVar
YWHAE_chr17_1339275_1405222	1394444	A A	AAAAAAAA others(30): Show AAAAAAAAAAAAAAAAAAAAAAAACAAAAAAAAAAAAC	intron_variant intron_variant	MODIFIER	HG03098.hp1 HG03098.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0018 a0001c0001t0003g0018	1	373	0.0027	37	c.64+ others(52): Show c.64+5602_64+5603insGTTTTTTTTTTTTGTTTTTTTTTTTTTTTT TTTTTTT	YWHAE	ENSG00000108953.17	transcript	ENST00000264335.13	protein_coding	1/5			chr17	TogoVar
ZAN_chr7_100728595_100802797	100742878	A A	AGGGAGGG others(30): Show AGGGAGGGGGAGGGGGAGGGGGGAGGGGGAGGGGGAGG	intron_variant intron_variant	MODIFIER	HG01175.hp2 HG01175.hp2	a0013 a0013	a0013c0029 a0013c0029	a0013c0029t0001 a0013c0029t0001	a0013c0029t0001g0285 a0013c0029t0001g0285	1	308	0.0033	37	c.767 others(54): Show c.767-3644_767-3643insGGGGGGAGGGGGAGGGGGAGGGGGAGGG GGAGGGGGA	ZAN	ENSG00000146839.19	transcript	ENST00000613979.5	protein_coding	7/47		INFO_REALIGN_3_PRIME	chr7	TogoVar
ZAN_chr7_100728595_100802797	100742882	A A	AGGGGGAG others(30): Show AGGGGGAGGGGGAGGGGGAGGGGGAGGGGGAGGGGGAG	intron_variant intron_variant	MODIFIER	HG03195.hp2 HG03195.hp2	a0020 a0020	a0020c0014 a0020c0014	a0020c0014t0001 a0020c0014t0001	a0020c0014t0001g0292 a0020c0014t0001g0292	1	308	0.0033	37	c.767 others(54): Show c.767-3644_767-3643insGGGGGAGGGGGAGGGGGAGGGGGAGGGG GGAGGGGGA	ZAN	ENSG00000146839.19	transcript	ENST00000613979.5	protein_coding	7/47		INFO_REALIGN_3_PRIME	chr7	TogoVar
ZBBX_chr3_167234843_167385297	167330965	C C	CTCTCTCT others(30): Show CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	intron_variant intron_variant	MODIFIER	NA19085.hp1 NA21309.hp2 NA19085.hp1 NA21309.hp2	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0001 a0002c0001t0001	a0002c0001t0001g0137 a0002c0001t0001g0235 a0002c0001t0001g0137 a0002c0001t0001g0235	2	290	0.0069	37	c.688 others(54): Show c.688-2850_688-2849insAGAGAGAGAGAGAGAGAGAGAGAGAGAG AGAGAGAGA	ZBBX	ENSG00000169064.13	transcript	ENST00000675490.1	protein_coding	10/21			chr3	TogoVar
ZBTB16_chr11_114054711_114261765	114199217	A A	ACGGACAT others(30): Show ACGGACATGGATGCCGCTGGGCCCAGGGACGGGGATGC	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG01099.hp1 HG02486.hp2 others(4): Show HG00738.hp1 HG01099.hp1 HG02486.hp2 HG02809.hp2 HG02965.hp1 HG06807.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0031 a0001c0001t0036 others(3): Show a0001c0001t0005 a0001c0001t0031 a0001c0001t0036 a0001c0001t0042 a0001c0001t0065 a0001c0001t0087	a0001c0001t0005g0258 a0001c0001t0031g0194 a0001c0001t0036g0022 others(4): Show a0001c0001t0005g0258 a0001c0001t0031g0194 a0001c0001t0036g0022 a0001c0001t0036g0023 a0001c0001t0042g0039 a0001c0001t0065g0141 a0001c0001t0087g0268	7	278	0.0252	37	c.145 others(58): Show c.1453+12240_1453+12276dupAGGGACGGGGATGCCGGACATGGA TGCCGCTGGGCCC	ZBTB16	ENSG00000109906.15	transcript	ENST00000335953.9	protein_coding	4/6		INFO_REALIGN_3_PRIME	chr11	TogoVar
ZBTB38_chr3_141363504_141454792	141431341	A A	AAAAAAAA others(30): Show AAAAAAAAAAAAAAAAATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02717.hp2 HG02717.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0016 a0001c0001t0016	a0001c0001t0016g0090 a0001c0001t0016g0090	1	270	0.0037	37	c.1-1 others(52): Show c.1-11047_1-11046insAAAAAAAAAAAAAAATATATATATATATAT ATATATA	ZBTB38	ENSG00000177311.12	transcript	ENST00000321464.7	protein_coding	5/5		INFO_REALIGN_3_PRIME	chr3	TogoVar
ZBTB38_chr3_141363504_141454792	141431341	A A	AAAAATAT others(30): Show AAAAATATATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG01891.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0101 a0001c0001t0004g0101	1	270	0.0037	37	c.1-1 others(52): Show c.1-11047_1-11046insAAATATATATATATATATATATATATATAT ATATATA	ZBTB38	ENSG00000177311.12	transcript	ENST00000321464.7	protein_coding	5/5		INFO_REALIGN_3_PRIME	chr3	TogoVar
ZBTB46_chr20_63738670_63836264	63831457	G G	GTACCGAG others(30): Show GTACCGAGAGAGATCGTGTAATAGAGAGCAGATTCCAC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01256.hp2 HG01256.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0097 a0001c0002t0001g0097	1	316	0.0032	37	c.-39 others(46): Show c.-395_-394insGTGGAATCTGCTCTCTATTACACGATCTCTCTCGGT A	ZBTB46	ENSG00000130584.12	transcript	ENST00000245663.9	protein_coding		194		chr20	TogoVar
ZBTB7C_chr18_48021672_48414383	48162022	C C	CGGGCGGG others(30): Show CGGGCGGGACCCGCACTGACCCCGCAGGGGGCGAGGCG	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00735.hp1 HG01346.hp2 HG00099.hp2 HG00735.hp1 HG01346.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0001t0010 a0001c0003t0045 a0001c0001t0001 a0001c0001t0010 a0001c0003t0045	a0001c0001t0001g0033 a0001c0001t0010g0041 a0001c0003t0045g0148 a0001c0001t0001g0033 a0001c0001t0010g0041 a0001c0003t0045g0148	3	174	0.0172	37	c.-17 others(56): Show c.-17+23875_-17+23911dupCGCCTCGCCCCCTGCGGGGTCAGTGC GGGTCCCGCCC	ZBTB7C	ENSG00000184828.10	transcript	ENST00000590800.6	protein_coding	3/4			chr18	TogoVar
ZBTB7C_chr18_48021672_48414383	48409967	C C	CCCGACCC others(30): Show CCCGACCCGGGGCAGCCGTGCGGCAGAGATGGGCTCTG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01884.hp2 HG01884.hp2	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0005 a0002c0004t0005	a0002c0004t0005g0003 a0002c0004t0005g0003	1	174	0.0058	37	c.-10 others(48): Show c.-1046_-1045insCAGAGCCCATCTCTGCCGCACGGCTGCCCCGGGT CGG	ZBTB7C	ENSG00000184828.10	transcript	ENST00000590800.6	protein_coding		585		chr18	TogoVar
ZBTB7C_chr18_48021672_48414383	48409967	C C	CCCGACCC others(30): Show CCCGACCCGGGGCAGCGGTGCGGCAGAGATGGGCTCTG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02055.hp1 HG02622.hp2 HG03130.hp2 others(2): Show HG02055.hp1 HG02622.hp2 HG03130.hp2 NA18522.hp1 NA19030.hp1	a0001 a0005 a0001 a0005	a0001c0002 a0001c0003 a0001c0006 others(1): Show a0001c0002 a0001c0003 a0001c0006 a0005c0010	a0001c0002t0001 a0001c0002t0015 a0001c0003t0002 others(2): Show a0001c0002t0001 a0001c0002t0015 a0001c0003t0002 a0001c0006t0005 a0005c0010t0022	a0001c0002t0001g0015 a0001c0002t0015g0004 a0001c0003t0002g0002 others(2): Show a0001c0002t0001g0015 a0001c0002t0015g0004 a0001c0003t0002g0002 a0001c0006t0005g0013 a0005c0010t0022g0020	5	174	0.0287	37	c.-10 others(48): Show c.-1082_-1046dupCAGAGCCCATCTCTGCCGCACCGCTGCCCCGGGT CGG	ZBTB7C	ENSG00000184828.10	transcript	ENST00000590800.6	protein_coding		585		chr18	TogoVar

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