Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
APIP_chr11_34877295_34921379	34895757	C C	CAGAT CAGAT	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00280.hp1 HG00280.hp2 others(178): Show HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00609.hp2 HG00621.hp1 HG00642.hp2 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG00738.hp1 HG01070.hp1 HG01071.hp1 HG01074.hp1 HG01081.hp1 HG01099.hp1 HG01099.hp2 HG01106.hp2 HG01109.hp1 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01167.hp2 HG01168.hp2 HG01169.hp2 HG01192.hp1 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01256.hp2 HG01257.hp1 HG01258.hp1 HG01261.hp2 HG01358.hp2 HG01361.hp2 HG01433.hp2 HG01515.hp2 HG01516.hp2 HG01517.hp1 HG01891.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp2 HG01975.hp1 HG01993.hp1 HG02015.hp1 HG02040.hp2 HG02056.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02135.hp1 HG02135.hp2 HG02145.hp1 HG02165.hp1 HG02165.hp2 HG02258.hp2 HG02293.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp1 HG02559.hp2 HG02622.hp1 HG02630.hp1 HG02717.hp1 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG02809.hp1 HG02895.hp1 HG02896.hp2 HG02897.hp2 HG02976.hp1 HG03017.hp1 HG03130.hp1 HG03139.hp1 HG03209.hp1 HG03239.hp2 HG03453.hp1 HG03471.hp1 HG03471.hp2 HG03490.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03516.hp2 HG03579.hp1 HG03654.hp1 HG03704.hp1 HG03704.hp2 HG03710.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03942.hp1 HG04184.hp1 HG04199.hp1 HG04204.hp2 HG04228.hp2 NA18522.hp2 NA18747.hp1 NA18747.hp2 NA18940.hp1 NA18942.hp1 NA18943.hp1 NA18943.hp2 NA18945.hp2 NA18948.hp2 NA18949.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18955.hp2 NA18957.hp1 NA18959.hp1 NA18959.hp2 NA18960.hp2 NA18964.hp1 NA18965.hp2 NA18967.hp2 NA18970.hp1 NA18970.hp2 NA18973.hp2 NA18975.hp1 NA18977.hp2 NA18978.hp1 NA18980.hp1 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18984.hp2 NA18986.hp2 NA18987.hp1 NA18987.hp2 NA18988.hp2 NA18991.hp1 NA18994.hp1 NA18995.hp2 NA18998.hp2 NA18999.hp2 NA19002.hp1 NA19003.hp2 NA19010.hp2 NA19012.hp2 NA19043.hp2 NA19054.hp1 NA19056.hp1 NA19063.hp1 NA19064.hp1 NA19068.hp2 NA19072.hp2 NA19075.hp1 NA19075.hp2 NA19077.hp1 NA19078.hp2 NA19079.hp1 NA19079.hp2 NA19082.hp2 NA19085.hp1 NA19086.hp1 NA19087.hp1 NA19087.hp2 NA19088.hp1 NA19088.hp2 NA19091.hp1 NA20300.hp2 NA21309.hp2	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0004 a0006	a0001c0007 a0002c0002 a0002c0006 others(3): Show a0001c0007 a0002c0002 a0002c0006 a0003c0003 a0004c0004 a0006c0008	a0001c0007t0002 a0002c0002t0001 a0002c0006t0001 others(4): Show a0001c0007t0002 a0002c0002t0001 a0002c0006t0001 a0003c0003t0003 a0003c0003t0007 a0004c0004t0003 a0006c0008t0001	a0001c0007t0002g0186 a0002c0002t0001g0002 a0002c0002t0001g0004 others(95): Show a0001c0007t0002g0186 a0002c0002t0001g0002 a0002c0002t0001g0004 a0002c0002t0001g0007 a0002c0002t0001g0008 a0002c0002t0001g0009 a0002c0002t0001g0011 a0002c0002t0001g0012 a0002c0002t0001g0013 a0002c0002t0001g0014 a0002c0002t0001g0019 a0002c0002t0001g0020 a0002c0002t0001g0037 a0002c0002t0001g0038 a0002c0002t0001g0040 a0002c0002t0001g0041 a0002c0002t0001g0042 a0002c0002t0001g0043 a0002c0002t0001g0044 a0002c0002t0001g0045 a0002c0002t0001g0046 a0002c0002t0001g0047 a0002c0002t0001g0098 a0002c0002t0001g0099 a0002c0002t0001g0100 a0002c0002t0001g0101 a0002c0002t0001g0102 a0002c0002t0001g0103 a0002c0002t0001g0104 a0002c0002t0001g0105 a0002c0002t0001g0106 a0002c0002t0001g0107 a0002c0002t0001g0108 a0002c0002t0001g0109 a0002c0002t0001g0110 a0002c0002t0001g0111 a0002c0002t0001g0112 a0002c0002t0001g0113 a0002c0002t0001g0114 a0002c0002t0001g0115 a0002c0002t0001g0116 a0002c0002t0001g0117 a0002c0002t0001g0118 a0002c0002t0001g0119 a0002c0002t0001g0121 a0002c0002t0001g0122 a0002c0002t0001g0123 a0002c0002t0001g0124 a0002c0002t0001g0125 a0002c0002t0001g0126 a0002c0002t0001g0127 a0002c0002t0001g0128 a0002c0002t0001g0129 a0002c0002t0001g0130 a0002c0002t0001g0131 a0002c0002t0001g0132 a0002c0002t0001g0133 a0002c0002t0001g0134 a0002c0002t0001g0135 a0002c0002t0001g0136 a0002c0002t0001g0137 a0002c0002t0001g0138 a0002c0002t0001g0139 a0002c0002t0001g0140 a0002c0002t0001g0141 a0002c0002t0001g0142 a0002c0002t0001g0143 a0002c0002t0001g0144 a0002c0002t0001g0145 a0002c0002t0001g0146 a0002c0002t0001g0147 a0002c0002t0001g0148 a0002c0002t0001g0149 a0002c0002t0001g0150 a0002c0002t0001g0151 a0002c0002t0001g0152 a0002c0002t0001g0153 a0002c0002t0001g0154 a0002c0002t0001g0155 a0002c0002t0001g0156 a0002c0002t0001g0157 a0002c0002t0001g0158 a0002c0006t0001g0039 a0003c0003t0003g0005 a0003c0003t0003g0028 a0003c0003t0003g0058 a0003c0003t0003g0059 a0003c0003t0003g0060 a0003c0003t0003g0061 a0003c0003t0003g0062 a0003c0003t0003g0064 a0003c0003t0003g0065 a0003c0003t0007g0063 a0004c0004t0003g0017 a0004c0004t0003g0026 a0004c0004t0003g0027 a0004c0004t0003g0057 a0006c0008t0001g0120	181	354	0.5113	4	c.58- others(17): Show c.58-651_58-648dupATCT	APIP	ENSG00000149089.13	transcript	ENST00000395787.4	protein_coding	1/6			chr11	TogoVar
APLF_chr2_68462585_68585162	68468989	G G	GGTGT GGTGT	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00738.hp2 HG00741.hp1 others(38): Show HG00323.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01071.hp2 HG01106.hp2 HG01175.hp1 HG01261.hp1 HG01433.hp1 HG02145.hp1 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02300.hp1 HG02486.hp2 HG02602.hp1 HG02602.hp2 HG02717.hp1 HG02886.hp2 HG03098.hp2 HG03130.hp2 HG03239.hp1 HG03239.hp2 HG03471.hp2 HG03492.hp1 HG03942.hp1 NA18943.hp1 NA18962.hp2 NA18966.hp2 NA18969.hp1 NA18971.hp1 NA18971.hp2 NA18978.hp2 NA18984.hp1 NA18984.hp2 NA19005.hp2 NA19058.hp2 NA19068.hp1 NA19068.hp2 NA19079.hp2 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0011 a0001c0001t0015 a0001c0001t0001 a0001c0001t0011 a0001c0001t0015	a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0055 others(36): Show a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0055 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0001g0099 a0001c0001t0001g0100 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0011g0070 a0001c0001t0011g0082 a0001c0001t0015g0089	41	120	0.3417	4	c.96+ others(19): Show c.96+1191_96+1194dupGTGT	APLF	ENSG00000169621.11	transcript	ENST00000303795.9	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr2	TogoVar
APLF_chr2_68462585_68585162	68484168	T T	TAACA TAACA	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01167.hp1 HG01167.hp2 others(57): Show HG01109.hp1 HG01167.hp1 HG01167.hp2 HG01169.hp1 HG01243.hp1 HG01433.hp2 HG01884.hp2 HG01891.hp2 HG02055.hp1 HG02109.hp1 HG02129.hp1 HG02145.hp2 HG02257.hp2 HG02280.hp1 HG02293.hp1 HG02300.hp2 HG02451.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02738.hp1 HG02809.hp1 HG02886.hp1 HG02895.hp1 HG02895.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02970.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03195.hp1 HG03209.hp1 HG03225.hp2 HG03453.hp1 HG03486.hp1 HG03486.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03942.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp2 NA18906.hp2 NA18943.hp2 NA18966.hp1 NA18978.hp1 NA19005.hp1 NA19043.hp1 NA19058.hp1 NA19079.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20752.hp1 NA20805.hp2	a0002 a0004 a0006 others(3): Show a0002 a0004 a0006 a0010 a0011 a0012	a0002c0002 a0002c0011 a0004c0004 others(5): Show a0002c0002 a0002c0011 a0004c0004 a0006c0007 a0006c0013 a0010c0014 a0011c0012 a0012c0015	a0002c0002t0002 a0002c0002t0006 a0002c0002t0007 others(12): Show a0002c0002t0002 a0002c0002t0006 a0002c0002t0007 a0002c0002t0008 a0002c0002t0009 a0002c0002t0010 a0002c0002t0012 a0002c0011t0002 a0004c0004t0003 a0006c0007t0006 a0006c0007t0017 a0006c0013t0016 a0010c0014t0009 a0011c0012t0007 a0012c0015t0013	a0002c0002t0002g0034 a0002c0002t0002g0035 a0002c0002t0002g0036 others(54): Show a0002c0002t0002g0034 a0002c0002t0002g0035 a0002c0002t0002g0036 a0002c0002t0002g0037 a0002c0002t0002g0038 a0002c0002t0002g0039 a0002c0002t0002g0040 a0002c0002t0002g0041 a0002c0002t0002g0042 a0002c0002t0002g0043 a0002c0002t0002g0044 a0002c0002t0002g0045 a0002c0002t0002g0046 a0002c0002t0002g0047 a0002c0002t0002g0048 a0002c0002t0002g0050 a0002c0002t0002g0051 a0002c0002t0002g0052 a0002c0002t0002g0053 a0002c0002t0002g0054 a0002c0002t0006g0160 a0002c0002t0006g0161 a0002c0002t0006g0162 a0002c0002t0006g0163 a0002c0002t0007g0001 a0002c0002t0007g0029 a0002c0002t0007g0030 a0002c0002t0007g0031 a0002c0002t0008g0024 a0002c0002t0008g0025 a0002c0002t0008g0026 a0002c0002t0009g0003 a0002c0002t0010g0166 a0002c0002t0010g0167 a0002c0002t0010g0168 a0002c0002t0012g0022 a0002c0011t0002g0049 a0004c0004t0003g0009 a0004c0004t0003g0010 a0004c0004t0003g0011 a0004c0004t0003g0012 a0004c0004t0003g0013 a0004c0004t0003g0014 a0004c0004t0003g0015 a0004c0004t0003g0016 a0004c0004t0003g0017 a0004c0004t0003g0018 a0004c0004t0003g0019 a0004c0004t0003g0020 a0004c0004t0003g0021 a0006c0007t0006g0002 a0006c0007t0006g0033 a0006c0007t0017g0023 a0006c0013t0016g0165 a0010c0014t0009g0032 a0011c0012t0007g0028 a0012c0015t0013g0164	60	174	0.3448	4	c.97- others(19): Show c.97-6021_97-6018dupAACA	APLF	ENSG00000169621.11	transcript	ENST00000303795.9	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr2	TogoVar
APLF_chr2_68462585_68585162	68484964	C C	CTGTG CTGTG	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02280.hp1 HG02622.hp1 others(2): Show HG02109.hp1 HG02280.hp1 HG02622.hp1 HG02622.hp2 NA20300.hp1	a0002 a0010 a0002 a0010	a0002c0002 a0010c0014 a0002c0002 a0010c0014	a0002c0002t0006 a0010c0014t0009 a0002c0002t0006 a0010c0014t0009	a0002c0002t0006g0160 a0002c0002t0006g0161 a0002c0002t0006g0162 others(2): Show a0002c0002t0006g0160 a0002c0002t0006g0161 a0002c0002t0006g0162 a0002c0002t0006g0163 a0010c0014t0009g0032	5	140	0.0357	4	c.97- others(19): Show c.97-5211_97-5208dupTGTG	APLF	ENSG00000169621.11	transcript	ENST00000303795.9	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr2	TogoVar
APLF_chr2_68462585_68585162	68500386	T T	TTAAA TTAAA	intron_variant intron_variant	MODIFIER	HG02129.hp1 HG02293.hp1 HG02300.hp2 others(11): Show HG02129.hp1 HG02293.hp1 HG02300.hp2 HG02738.hp1 HG03942.hp2 NA18522.hp2 NA18943.hp2 NA18966.hp1 NA18978.hp1 NA19005.hp1 NA19058.hp1 NA19079.hp1 NA20752.hp1 NA20805.hp2	a0004 a0012 a0004 a0012	a0004c0004 a0012c0015 a0004c0004 a0012c0015	a0004c0004t0003 a0012c0015t0013 a0004c0004t0003 a0012c0015t0013	a0004c0004t0003g0009 a0004c0004t0003g0010 a0004c0004t0003g0011 others(11): Show a0004c0004t0003g0009 a0004c0004t0003g0010 a0004c0004t0003g0011 a0004c0004t0003g0012 a0004c0004t0003g0013 a0004c0004t0003g0014 a0004c0004t0003g0015 a0004c0004t0003g0016 a0004c0004t0003g0017 a0004c0004t0003g0018 a0004c0004t0003g0019 a0004c0004t0003g0020 a0004c0004t0003g0021 a0012c0015t0013g0164	14	174	0.0805	4	c.169 others(21): Show c.169-2342_169-2339dupAATA	APLF	ENSG00000169621.11	transcript	ENST00000303795.9	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr2	TogoVar
APLF_chr2_68462585_68585162	68508106	A A	ATATT ATATT	intron_variant intron_variant	MODIFIER	HG02129.hp1 HG02293.hp1 HG02300.hp2 others(11): Show HG02129.hp1 HG02293.hp1 HG02300.hp2 HG02738.hp1 HG03942.hp2 NA18522.hp2 NA18943.hp2 NA18966.hp1 NA18978.hp1 NA19005.hp1 NA19058.hp1 NA19079.hp1 NA20752.hp1 NA20805.hp2	a0004 a0012 a0004 a0012	a0004c0004 a0012c0015 a0004c0004 a0012c0015	a0004c0004t0003 a0012c0015t0013 a0004c0004t0003 a0012c0015t0013	a0004c0004t0003g0009 a0004c0004t0003g0010 a0004c0004t0003g0011 others(11): Show a0004c0004t0003g0009 a0004c0004t0003g0010 a0004c0004t0003g0011 a0004c0004t0003g0012 a0004c0004t0003g0013 a0004c0004t0003g0014 a0004c0004t0003g0015 a0004c0004t0003g0016 a0004c0004t0003g0017 a0004c0004t0003g0018 a0004c0004t0003g0019 a0004c0004t0003g0020 a0004c0004t0003g0021 a0012c0015t0013g0164	14	174	0.0805	4	c.342 others(21): Show c.342-4972_342-4971insTTTA	APLF	ENSG00000169621.11	transcript	ENST00000303795.9	protein_coding	3/9		INFO_REALIGN_3_PRIME	chr2	TogoVar
APLF_chr2_68462585_68585162	68536913	T T	TATTA TATTA	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG03041.hp2 HG03516.hp2 HG02451.hp2 HG03041.hp2 HG03516.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0010 a0002c0002t0010	a0002c0002t0010g0166 a0002c0002t0010g0167 a0002c0002t0010g0168 a0002c0002t0010g0166 a0002c0002t0010g0167 a0002c0002t0010g0168	3	174	0.0172	4	c.805 others(19): Show c.805-959_805-958insATTA	APLF	ENSG00000169621.11	transcript	ENST00000303795.9	protein_coding	6/9			chr2	TogoVar
APLF_chr2_68462585_68585162	68551603	C C	CTTCT CTTCT	intron_variant intron_variant	MODIFIER	HG02129.hp1 HG02293.hp1 HG02300.hp2 others(11): Show HG02129.hp1 HG02293.hp1 HG02300.hp2 HG02738.hp1 HG02895.hp1 HG02897.hp2 HG03225.hp2 HG03942.hp2 NA18522.hp2 NA18943.hp2 NA18966.hp1 NA19043.hp1 NA19079.hp1 NA20805.hp2	a0002 a0004 a0012 a0002 a0004 a0012	a0002c0002 a0004c0004 a0012c0015 a0002c0002 a0004c0004 a0012c0015	a0002c0002t0002 a0002c0002t0009 a0002c0002t0012 others(2): Show a0002c0002t0002 a0002c0002t0009 a0002c0002t0012 a0004c0004t0003 a0012c0015t0013	a0002c0002t0002g0054 a0002c0002t0009g0003 a0002c0002t0012g0022 others(10): Show a0002c0002t0002g0054 a0002c0002t0009g0003 a0002c0002t0012g0022 a0004c0004t0003g0010 a0004c0004t0003g0011 a0004c0004t0003g0012 a0004c0004t0003g0013 a0004c0004t0003g0015 a0004c0004t0003g0016 a0004c0004t0003g0017 a0004c0004t0003g0020 a0004c0004t0003g0021 a0012c0015t0013g0164	14	135	0.1037	4	c.128 others(23): Show c.1286+6293_1286+6294insCTTT	APLF	ENSG00000169621.11	transcript	ENST00000303795.9	protein_coding	8/9		INFO_REALIGN_3_PRIME	chr2	TogoVar
APLF_chr2_68462585_68585162	68560426	T T	TAGAA TAGAA	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG00738.hp1 HG01192.hp1 others(29): Show HG00639.hp1 HG00738.hp1 HG01192.hp1 HG01261.hp2 HG01943.hp1 HG02109.hp1 HG02257.hp1 HG02280.hp1 HG02486.hp1 HG02572.hp2 HG02615.hp2 HG02622.hp1 HG02717.hp2 HG02965.hp1 HG02970.hp1 HG03098.hp1 HG03130.hp1 HG03139.hp2 HG03195.hp1 HG03225.hp1 HG03225.hp2 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03540.hp2 HG03834.hp2 NA18906.hp1 NA19240.hp1 NA20300.hp1 NA20805.hp1 NA21309.hp2	a0002 a0003 a0006 others(1): Show a0002 a0003 a0006 a0009	a0002c0002 a0003c0003 a0006c0007 others(2): Show a0002c0002 a0003c0003 a0006c0007 a0006c0013 a0009c0008	a0002c0002t0006 a0002c0002t0012 a0003c0003t0004 others(5): Show a0002c0002t0006 a0002c0002t0012 a0003c0003t0004 a0003c0003t0005 a0006c0007t0006 a0006c0007t0017 a0006c0013t0016 a0009c0008t0006	a0002c0002t0006g0160 a0002c0002t0006g0161 a0002c0002t0006g0162 others(28): Show a0002c0002t0006g0160 a0002c0002t0006g0161 a0002c0002t0006g0162 a0002c0002t0006g0163 a0002c0002t0012g0022 a0003c0003t0004g0103 a0003c0003t0004g0113 a0003c0003t0004g0114 a0003c0003t0004g0118 a0003c0003t0004g0119 a0003c0003t0004g0120 a0003c0003t0004g0121 a0003c0003t0004g0122 a0003c0003t0004g0123 a0003c0003t0004g0124 a0003c0003t0004g0125 a0003c0003t0004g0150 a0003c0003t0005g0104 a0003c0003t0005g0126 a0003c0003t0005g0127 a0003c0003t0005g0128 a0003c0003t0005g0129 a0003c0003t0005g0130 a0003c0003t0005g0131 a0003c0003t0005g0132 a0003c0003t0005g0133 a0006c0007t0006g0002 a0006c0007t0006g0033 a0006c0007t0017g0023 a0006c0013t0016g0165 a0009c0008t0006g0027	32	174	0.1839	4	c.128 others(23): Show c.1287-6913_1287-6912insAAAG	APLF	ENSG00000169621.11	transcript	ENST00000303795.9	protein_coding	8/9		INFO_REALIGN_3_PRIME	chr2	TogoVar
APLF_chr2_68462585_68585162	68565508	C C	CAGAT CAGAT	intron_variant intron_variant	MODIFIER	HG01167.hp2 HG02055.hp1 HG02257.hp2 others(6): Show HG01167.hp2 HG02055.hp1 HG02257.hp2 HG02895.hp1 HG02897.hp2 HG02922.hp1 HG03486.hp1 NA19043.hp1 NA20129.hp2	a0002 a0006 a0002 a0006	a0002c0002 a0006c0013 a0002c0002 a0006c0013	a0002c0002t0002 a0002c0002t0008 a0002c0002t0009 others(1): Show a0002c0002t0002 a0002c0002t0008 a0002c0002t0009 a0006c0013t0016	a0002c0002t0002g0043 a0002c0002t0002g0050 a0002c0002t0002g0054 others(5): Show a0002c0002t0002g0043 a0002c0002t0002g0050 a0002c0002t0002g0054 a0002c0002t0008g0024 a0002c0002t0008g0025 a0002c0002t0008g0026 a0002c0002t0009g0003 a0006c0013t0016g0165	9	148	0.0608	4	c.128 others(23): Show c.1287-1827_1287-1824dupGATA	APLF	ENSG00000169621.11	transcript	ENST00000303795.9	protein_coding	8/9		INFO_REALIGN_3_PRIME	chr2	TogoVar
APLF_chr2_68462585_68585162	68565514	G G	GATAC GATAC	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG01109.hp1 HG01109.hp2 others(23): Show HG00639.hp2 HG01109.hp1 HG01109.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp2 HG02109.hp1 HG02129.hp1 HG02280.hp1 HG02293.hp1 HG02300.hp2 HG02451.hp2 HG02486.hp1 HG02717.hp1 HG02738.hp1 HG02738.hp2 HG03041.hp2 HG03516.hp2 HG03540.hp1 HG04228.hp2 NA18971.hp2 NA18978.hp1 NA19005.hp1 NA19079.hp1 NA20752.hp1 NA20805.hp2	a0001 a0002 a0004 others(3): Show a0001 a0002 a0004 a0005 a0009 a0011	a0001c0001 a0002c0002 a0004c0004 others(3): Show a0001c0001 a0002c0002 a0004c0004 a0005c0005 a0009c0008 a0011c0012	a0001c0001t0001 a0002c0002t0006 a0002c0002t0007 others(6): Show a0001c0001t0001 a0002c0002t0006 a0002c0002t0007 a0002c0002t0010 a0004c0004t0003 a0005c0005t0001 a0005c0005t0014 a0009c0008t0006 a0011c0012t0007	a0001c0001t0001g0067 a0001c0001t0001g0086 a0001c0001t0001g0087 others(23): Show a0001c0001t0001g0067 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0149 a0002c0002t0006g0161 a0002c0002t0006g0162 a0002c0002t0007g0030 a0002c0002t0010g0166 a0002c0002t0010g0167 a0002c0002t0010g0168 a0004c0004t0003g0009 a0004c0004t0003g0010 a0004c0004t0003g0011 a0004c0004t0003g0012 a0004c0004t0003g0015 a0004c0004t0003g0016 a0004c0004t0003g0018 a0004c0004t0003g0019 a0004c0004t0003g0020 a0005c0005t0001g0143 a0005c0005t0001g0148 a0005c0005t0001g0152 a0005c0005t0001g0153 a0005c0005t0014g0141 a0009c0008t0006g0027 a0011c0012t0007g0028	26	142	0.1831	4	c.128 others(23): Show c.1287-1787_1287-1784dupCATA	APLF	ENSG00000169621.11	transcript	ENST00000303795.9	protein_coding	8/9		INFO_REALIGN_3_PRIME	chr2	TogoVar
APLF_chr2_68462585_68585162	68575155	C C	CAGAT CAGAT	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG00738.hp1 HG01192.hp1 others(29): Show HG00639.hp1 HG00738.hp1 HG01192.hp1 HG01261.hp2 HG01943.hp1 HG02109.hp1 HG02257.hp1 HG02280.hp1 HG02486.hp1 HG02572.hp2 HG02615.hp2 HG02622.hp1 HG02717.hp2 HG02965.hp1 HG02970.hp1 HG03098.hp1 HG03130.hp1 HG03139.hp2 HG03195.hp1 HG03225.hp1 HG03225.hp2 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03540.hp2 HG03834.hp2 NA18906.hp1 NA19240.hp1 NA20300.hp1 NA20805.hp1 NA21309.hp2	a0002 a0003 a0006 others(1): Show a0002 a0003 a0006 a0009	a0002c0002 a0003c0003 a0006c0007 others(2): Show a0002c0002 a0003c0003 a0006c0007 a0006c0013 a0009c0008	a0002c0002t0006 a0002c0002t0012 a0003c0003t0004 others(5): Show a0002c0002t0006 a0002c0002t0012 a0003c0003t0004 a0003c0003t0005 a0006c0007t0006 a0006c0007t0017 a0006c0013t0016 a0009c0008t0006	a0002c0002t0006g0160 a0002c0002t0006g0161 a0002c0002t0006g0162 others(28): Show a0002c0002t0006g0160 a0002c0002t0006g0161 a0002c0002t0006g0162 a0002c0002t0006g0163 a0002c0002t0012g0022 a0003c0003t0004g0103 a0003c0003t0004g0113 a0003c0003t0004g0114 a0003c0003t0004g0118 a0003c0003t0004g0119 a0003c0003t0004g0120 a0003c0003t0004g0121 a0003c0003t0004g0122 a0003c0003t0004g0123 a0003c0003t0004g0124 a0003c0003t0004g0125 a0003c0003t0004g0150 a0003c0003t0005g0104 a0003c0003t0005g0126 a0003c0003t0005g0127 a0003c0003t0005g0128 a0003c0003t0005g0129 a0003c0003t0005g0130 a0003c0003t0005g0131 a0003c0003t0005g0132 a0003c0003t0005g0133 a0006c0007t0006g0002 a0006c0007t0006g0033 a0006c0007t0017g0023 a0006c0013t0016g0165 a0009c0008t0006g0027	32	174	0.1839	4	c.133 others(23): Show c.1334-2663_1334-2662insATAG	APLF	ENSG00000169621.11	transcript	ENST00000303795.9	protein_coding	9/9		INFO_REALIGN_3_PRIME	chr2	TogoVar
APLNR_chr11_57228591_57242250	57233211	G G	GTGGA GTGGA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(303): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00323.hp1 HG00323.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00558.hp1 HG00597.hp1 HG00597.hp2 HG00621.hp2 HG00639.hp1 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00735.hp1 HG00738.hp1 HG00738.hp2 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01074.hp1 HG01074.hp2 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01167.hp2 HG01168.hp2 HG01169.hp2 HG01192.hp1 HG01243.hp1 HG01243.hp2 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01433.hp2 HG01496.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01891.hp1 HG01934.hp2 HG01943.hp1 HG01978.hp1 HG01981.hp1 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02056.hp1 HG02056.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02135.hp1 HG02135.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02273.hp1 HG02280.hp1 HG02300.hp1 HG02300.hp2 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02647.hp1 HG02683.hp1 HG02683.hp2 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02895.hp1 HG02896.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03225.hp1 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp2 HG03491.hp1 HG03492.hp1 HG03492.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp2 HG03834.hp2 HG03927.hp1 HG03942.hp1 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp2 NA18747.hp1 NA18747.hp2 NA18906.hp1 NA18941.hp1 NA18942.hp1 NA18942.hp2 NA18943.hp2 NA18948.hp1 NA18948.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp2 NA18952.hp1 NA18953.hp1 NA18953.hp2 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18955.hp2 NA18956.hp1 NA18956.hp2 NA18957.hp2 NA18961.hp2 NA18962.hp1 NA18962.hp2 NA18963.hp1 NA18963.hp2 NA18964.hp1 NA18964.hp2 NA18965.hp2 NA18966.hp1 NA18966.hp2 NA18967.hp2 NA18968.hp1 NA18968.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18972.hp1 NA18975.hp1 NA18975.hp2 NA18977.hp1 NA18978.hp1 NA18978.hp2 NA18979.hp1 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18986.hp2 NA18988.hp2 NA18990.hp1 NA18990.hp2 NA18992.hp1 NA18993.hp1 NA18993.hp2 NA18994.hp1 NA18994.hp2 NA18995.hp1 NA18995.hp2 NA18997.hp1 NA18997.hp2 NA19000.hp1 NA19000.hp2 NA19001.hp1 NA19001.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19043.hp1 NA19054.hp1 NA19054.hp2 NA19055.hp1 NA19055.hp2 NA19056.hp1 NA19056.hp2 NA19057.hp1 NA19057.hp2 NA19059.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp1 NA19066.hp2 NA19067.hp1 NA19067.hp2 NA19068.hp1 NA19068.hp2 NA19074.hp2 NA19075.hp2 NA19076.hp1 NA19076.hp2 NA19077.hp1 NA19077.hp2 NA19078.hp1 NA19078.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19082.hp1 NA19082.hp2 NA19083.hp1 NA19084.hp2 NA19085.hp1 NA19085.hp2 NA19087.hp1 NA19087.hp2 NA19088.hp2 NA19240.hp2 NA20129.hp2 NA20300.hp1 NA20752.hp1 NA20752.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0002 a0002c0003 others(2): Show a0001c0001 a0001c0002 a0002c0003 a0002c0004 a0003c0005	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(24): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0013 a0001c0001t0014 a0001c0001t0015 a0001c0001t0022 a0001c0001t0023 a0001c0001t0024 a0001c0001t0025 a0001c0001t0027 a0001c0001t0028 a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0001c0002t0004 a0001c0002t0005 a0001c0002t0006 a0001c0002t0008 a0001c0002t0009 a0001c0002t0016 a0001c0002t0017 a0001c0002t0018 a0001c0002t0019 a0002c0003t0010 a0002c0004t0003 a0003c0005t0001	a0001c0001t0001g0000 a0001c0001t0002g0000 a0001c0001t0003g0000 others(24): Show a0001c0001t0001g0000 a0001c0001t0002g0000 a0001c0001t0003g0000 a0001c0001t0013g0000 a0001c0001t0014g0000 a0001c0001t0015g0000 a0001c0001t0022g0000 a0001c0001t0023g0000 a0001c0001t0024g0000 a0001c0001t0025g0000 a0001c0001t0027g0000 a0001c0001t0028g0000 a0001c0002t0001g0000 a0001c0002t0002g0000 a0001c0002t0003g0000 a0001c0002t0004g0000 a0001c0002t0005g0000 a0001c0002t0006g0000 a0001c0002t0008g0000 a0001c0002t0009g0000 a0001c0002t0016g0000 a0001c0002t0017g0000 a0001c0002t0018g0000 a0001c0002t0019g0000 a0002c0003t0010g0000 a0002c0004t0003g0000 a0003c0005t0001g0000	306	349	0.8768	4	c.26 others(15): Show c.2650_*2651insTCCA	APLNR	ENSG00000134817.12	transcript	ENST00000606794.2	protein_coding		379		chr11	TogoVar
APLNR_chr11_57228591_57242250	57238146	T T	TTTTG TTTTG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp2 HG00639.hp1 HG00642.hp1 others(8): Show HG00099.hp2 HG00639.hp1 HG00642.hp1 HG01106.hp1 HG01106.hp2 HG01123.hp2 HG01433.hp1 HG01516.hp2 HG01517.hp1 HG02698.hp1 HG03239.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0000 a0001c0002t0003g0000	11	428	0.0257	4	c.-11 others(15): Show c.-1143_-1142insCAAA	APLNR	ENSG00000134817.12	transcript	ENST00000606794.2	protein_coding		897		chr11	TogoVar
APLN_chrX_129640259_129659956	129656660	C C	CTTTT CTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02258.hp1 HG02280.hp2 HG02717.hp1 others(9): Show HG02258.hp1 HG02280.hp2 HG02717.hp1 HG02723.hp1 HG02886.hp2 HG02965.hp1 HG03041.hp1 HG03209.hp1 HG03225.hp1 HG03516.hp1 NA19030.hp1 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0004 a0001c0001t0003 a0001c0001t0004	a0001c0001t0003g0005 a0001c0001t0003g0026 a0001c0001t0004g0028 a0001c0001t0003g0005 a0001c0001t0003g0026 a0001c0001t0004g0028	12	150	0.0800	4	c.-20 others(15): Show c.-2031_-2030insAAAA	APLN	ENSG00000171388.12	transcript	ENST00000429967.3	protein_coding		1705		chrX	TogoVar
APLP1_chr19_35863574_35884792	35865173	C C	CTTTT CTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00408.hp1 HG00438.hp2 HG02083.hp2 others(13): Show HG00408.hp1 HG00438.hp2 HG02083.hp2 HG02257.hp2 HG02723.hp2 HG03225.hp2 HG03471.hp1 HG03471.hp2 NA18747.hp1 NA18906.hp2 NA18944.hp2 NA18947.hp1 NA18979.hp1 NA18995.hp1 NA19078.hp1 NA19080.hp1	a0001 a0002 a0001 a0002	a0001c0002 a0001c0003 a0001c0004 others(1): Show a0001c0002 a0001c0003 a0001c0004 a0002c0012	a0001c0002t0002 a0001c0002t0003 a0001c0003t0002 others(2): Show a0001c0002t0002 a0001c0002t0003 a0001c0003t0002 a0001c0004t0002 a0002c0012t0002	a0001c0002t0002g0011 a0001c0002t0003g0017 a0001c0002t0003g0021 others(5): Show a0001c0002t0002g0011 a0001c0002t0003g0017 a0001c0002t0003g0021 a0001c0003t0002g0038 a0001c0004t0002g0005 a0001c0004t0002g0018 a0001c0004t0002g0040 a0002c0012t0002g0005	16	188	0.0851	4	c.-34 others(15): Show c.-3464_-3463insTTTT	APLP1	ENSG00000105290.13	transcript	ENST00000221891.9	protein_coding		3400		chr19	TogoVar
APLP1_chr19_35863574_35884792	35867620	T T	TCACA TCACA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01109.hp2 HG02257.hp1 HG02630.hp2 others(3): Show HG01109.hp2 HG02257.hp1 HG02630.hp2 HG02922.hp1 HG03540.hp2 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0009 a0001c0001t0001g0042 a0001c0001t0001g0044 a0001c0001t0001g0009 a0001c0001t0001g0042 a0001c0001t0001g0044	6	171	0.0351	4	c.-10 others(15): Show c.-1017_-1016insCACA	APLP1	ENSG00000105290.13	transcript	ENST00000221891.9	protein_coding		953		chr19	TogoVar
APLP1_chr19_35863574_35884792	35875160	C C	CTTTT CTTTT	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG02083.hp2 HG02165.hp1 others(9): Show HG00408.hp1 HG02083.hp2 HG02165.hp1 NA18747.hp1 NA18944.hp2 NA18947.hp1 NA18948.hp1 NA18967.hp1 NA18979.hp1 NA18995.hp1 NA19075.hp2 NA19080.hp1	a0001 a0002 a0001 a0002	a0001c0004 a0002c0012 a0001c0004 a0002c0012	a0001c0004t0002 a0002c0012t0002 a0001c0004t0002 a0002c0012t0002	a0001c0004t0002g0005 a0001c0004t0002g0034 a0001c0004t0002g0035 others(2): Show a0001c0004t0002g0005 a0001c0004t0002g0034 a0001c0004t0002g0035 a0001c0004t0002g0041 a0002c0012t0002g0005	12	173	0.0694	4	c.134 others(21): Show c.1344+308_1344+311dupTTTT	APLP1	ENSG00000105290.13	transcript	ENST00000221891.9	protein_coding	10/16		INFO_REALIGN_3_PRIME	chr19	TogoVar
APLP1_chr19_35863574_35884792	35882169	T T	TAATA TAATA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02109.hp1 HG02451.hp2 HG02622.hp1 others(9): Show HG02109.hp1 HG02451.hp2 HG02622.hp1 HG02723.hp2 HG02895.hp1 HG02897.hp2 HG02965.hp2 HG03098.hp2 HG03139.hp1 HG03471.hp2 NA18906.hp2 NA19030.hp2	a0001 a0001	a0001c0002 a0001c0003 a0001c0005 a0001c0002 a0001c0003 a0001c0005	a0001c0002t0002 a0001c0002t0003 a0001c0003t0002 others(1): Show a0001c0002t0002 a0001c0002t0003 a0001c0003t0002 a0001c0005t0004	a0001c0002t0002g0011 a0001c0002t0002g0020 a0001c0002t0003g0017 others(5): Show a0001c0002t0002g0011 a0001c0002t0002g0020 a0001c0002t0003g0017 a0001c0002t0003g0021 a0001c0002t0003g0037 a0001c0003t0002g0006 a0001c0005t0004g0016 a0001c0005t0004g0070	12	237	0.0506	4	c.27 others(15): Show c.2728_*2729insAATA	APLP1	ENSG00000105290.13	transcript	ENST00000221891.9	protein_coding		2378		chr19	TogoVar
APLP1_chr19_35863574_35884792	35882172	A A	AAAAT AAAAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00408.hp2 HG00609.hp2 HG00741.hp1 others(39): Show HG00408.hp2 HG00609.hp2 HG00741.hp1 HG01071.hp1 HG01071.hp2 HG01099.hp2 HG01109.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp2 HG01496.hp2 HG01884.hp1 HG02071.hp1 HG02071.hp2 HG02080.hp1 HG02109.hp2 HG02145.hp1 HG02280.hp2 HG02630.hp2 HG02922.hp1 HG02976.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03239.hp1 HG03516.hp2 HG03540.hp2 HG03688.hp1 HG03688.hp2 HG03710.hp2 HG03834.hp2 HG04115.hp2 NA18522.hp2 NA18962.hp1 NA18967.hp2 NA19005.hp1 NA19043.hp1 NA19067.hp2 NA19083.hp1 NA19083.hp2 NA20752.hp2 NA21309.hp1	a0001 a0007 a0001 a0007	a0001c0001 a0007c0014 a0001c0001 a0007c0014	a0001c0001t0001 a0001c0001t0005 a0007c0014t0001 a0001c0001t0001 a0001c0001t0005 a0007c0014t0001	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(14): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0009 a0001c0001t0001g0013 a0001c0001t0001g0024 a0001c0001t0001g0027 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0045 a0001c0001t0001g0052 a0001c0001t0001g0064 a0001c0001t0001g0066 a0001c0001t0001g0069 a0001c0001t0005g0033 a0007c0014t0001g0063	42	204	0.2059	4	c.27 others(15): Show c.2731_*2732insAAAT	APLP1	ENSG00000105290.13	transcript	ENST00000221891.9	protein_coding		2381		chr19	TogoVar
APLP2_chr11_130064894_130149805	130079079	T T	TTTTA TTTTA	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG02622.hp1 HG02630.hp1 others(4): Show HG00642.hp2 HG02622.hp1 HG02630.hp1 HG03225.hp2 NA18962.hp1 NA19030.hp2 NA19067.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0006 a0002c0002t0003 a0001c0001t0001 a0001c0001t0006 a0002c0002t0003	a0001c0001t0001g0134 a0001c0001t0006g0046 a0001c0001t0006g0047 others(4): Show a0001c0001t0001g0134 a0001c0001t0006g0046 a0001c0001t0006g0047 a0001c0001t0006g0048 a0001c0001t0006g0049 a0001c0001t0006g0050 a0002c0002t0003g0153	7	259	0.0270	4	c.105 others(21): Show c.105+9000_105+9001insATTT	APLP2	ENSG00000084234.18	transcript	ENST00000338167.10	protein_coding	1/16		INFO_REALIGN_3_PRIME	chr11	TogoVar
APLP2_chr11_130064894_130149805	130092706	A A	AGAGG AGAGG	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00544.hp1 HG01074.hp1 others(21): Show HG00140.hp2 HG00544.hp1 HG01074.hp1 HG01074.hp2 HG01099.hp1 HG01109.hp1 HG01261.hp2 HG01358.hp1 HG01952.hp1 HG01978.hp2 HG02015.hp2 HG02056.hp2 HG02280.hp1 HG02451.hp1 HG02451.hp2 HG02572.hp2 HG02698.hp1 HG02886.hp1 HG03139.hp1 HG03579.hp1 HG04184.hp1 NA19043.hp2 NA19068.hp1 NA21309.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0009 a0002c0002t0002	a0001c0001t0001g0011 a0001c0001t0001g0145 a0001c0001t0001g0146 others(20): Show a0001c0001t0001g0011 a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0156 a0001c0001t0001g0172 a0001c0001t0001g0177 a0001c0001t0001g0180 a0001c0001t0001g0183 a0001c0001t0001g0257 a0001c0001t0002g0253 a0001c0001t0002g0254 a0001c0001t0002g0255 a0001c0001t0004g0010 a0001c0001t0004g0250 a0001c0001t0004g0251 a0001c0001t0004g0252 a0001c0001t0009g0010 a0001c0001t0009g0249 a0002c0002t0002g0130 a0002c0002t0002g0131	24	218	0.1101	4	c.106 others(23): Show c.106-16722_106-16721insAGGG	APLP2	ENSG00000084234.18	transcript	ENST00000338167.10	protein_coding	1/16		INFO_REALIGN_3_PRIME	chr11	TogoVar
APLP2_chr11_130064894_130149805	130095110	T T	TAATG TAATG	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00140.hp2 HG00408.hp1 others(249): Show HG00140.hp1 HG00140.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00544.hp1 HG00544.hp2 HG00609.hp1 HG00621.hp1 HG00621.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00735.hp1 HG00735.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01175.hp2 HG01243.hp1 HG01257.hp1 HG01257.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01516.hp1 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp2 HG01952.hp1 HG01978.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02056.hp1 HG02056.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03225.hp1 HG03225.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG06807.hp1 HG06807.hp2 NA18612.hp1 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18906.hp1 NA18906.hp2 NA18939.hp1 NA18940.hp1 NA18940.hp2 NA18941.hp1 NA18941.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18947.hp1 NA18947.hp2 NA18948.hp1 NA18948.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18952.hp1 NA18952.hp2 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18955.hp2 NA18959.hp1 NA18959.hp2 NA18960.hp1 NA18960.hp2 NA18962.hp1 NA18962.hp2 NA18963.hp1 NA18963.hp2 NA18964.hp1 NA18964.hp2 NA18967.hp1 NA18968.hp1 NA18968.hp2 NA18971.hp1 NA18971.hp2 NA18973.hp1 NA18973.hp2 NA18977.hp1 NA18977.hp2 NA18978.hp1 NA18978.hp2 NA18983.hp1 NA18983.hp2 NA18985.hp1 NA18986.hp1 NA18994.hp1 NA18994.hp2 NA18995.hp2 NA18998.hp1 NA19002.hp1 NA19002.hp2 NA19004.hp1 NA19004.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19060.hp1 NA19060.hp2 NA19063.hp2 NA19065.hp1 NA19067.hp1 NA19067.hp2 NA19068.hp1 NA19068.hp2 NA19077.hp2 NA19081.hp1 NA19081.hp2 NA19084.hp1 NA19084.hp2 NA19087.hp1 NA19087.hp2 NA19088.hp1 NA19088.hp2 NA19091.hp1 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA21309.hp1 NA21309.hp2	a0001 a0002 a0003 others(6): Show a0001 a0002 a0003 a0004 a0005 a0006 a0008 a0009 a0010	a0001c0001 a0001c0003 a0002c0002 others(7): Show a0001c0001 a0001c0003 a0002c0002 a0003c0006 a0004c0005 a0005c0004 a0006c0008 a0008c0009 a0009c0011 a0010c0007	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(23): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 a0001c0001t0015 a0001c0003t0013 a0001c0003t0016 a0002c0002t0001 a0002c0002t0002 a0002c0002t0003 a0002c0002t0008 a0002c0002t0012 a0002c0002t0014 a0003c0006t0002 a0004c0005t0001 a0004c0005t0002 a0005c0004t0001 a0006c0008t0002 a0008c0009t0002 a0009c0011t0001 a0010c0007t0001	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(237): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0030 a0001c0001t0001g0031 a0001c0001t0001g0038 a0001c0001t0001g0042 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0089 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0001g0099 a0001c0001t0001g0100 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0111 a0001c0001t0001g0112 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0117 a0001c0001t0001g0118 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0122 a0001c0001t0001g0126 a0001c0001t0001g0128 a0001c0001t0001g0129 a0001c0001t0001g0132 a0001c0001t0001g0134 a0001c0001t0001g0136 a0001c0001t0001g0137 a0001c0001t0001g0138 a0001c0001t0001g0140 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0150 a0001c0001t0001g0151 a0001c0001t0001g0155 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0162 a0001c0001t0001g0163 a0001c0001t0001g0164 a0001c0001t0001g0166 a0001c0001t0001g0167 a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0172 a0001c0001t0001g0173 a0001c0001t0001g0174 a0001c0001t0001g0175 a0001c0001t0001g0177 a0001c0001t0001g0178 a0001c0001t0001g0179 a0001c0001t0001g0180 a0001c0001t0001g0181 a0001c0001t0001g0182 a0001c0001t0001g0183 a0001c0001t0001g0186 a0001c0001t0001g0187 a0001c0001t0001g0243 a0001c0001t0001g0257 a0001c0001t0002g0005 a0001c0001t0002g0007 a0001c0001t0002g0008 a0001c0001t0002g0009 a0001c0001t0002g0135 a0001c0001t0002g0190 a0001c0001t0002g0191 a0001c0001t0002g0194 a0001c0001t0002g0195 a0001c0001t0002g0196 a0001c0001t0002g0197 a0001c0001t0002g0198 a0001c0001t0002g0199 a0001c0001t0002g0202 a0001c0001t0002g0203 a0001c0001t0002g0204 a0001c0001t0002g0206 a0001c0001t0002g0207 a0001c0001t0002g0208 a0001c0001t0002g0209 a0001c0001t0002g0210 a0001c0001t0002g0211 a0001c0001t0002g0213 a0001c0001t0002g0214 a0001c0001t0002g0215 a0001c0001t0002g0216 a0001c0001t0002g0217 a0001c0001t0002g0219 a0001c0001t0002g0220 a0001c0001t0002g0221 a0001c0001t0002g0223 a0001c0001t0002g0224 a0001c0001t0002g0226 a0001c0001t0002g0227 a0001c0001t0002g0228 a0001c0001t0002g0229 a0001c0001t0002g0234 a0001c0001t0002g0235 a0001c0001t0002g0236 a0001c0001t0002g0237 a0001c0001t0002g0240 a0001c0001t0002g0241 a0001c0001t0002g0253 a0001c0001t0002g0254 a0001c0001t0002g0255 a0001c0001t0004g0010 a0001c0001t0004g0188 a0001c0001t0004g0250 a0001c0001t0004g0251 a0001c0001t0004g0252 a0001c0001t0005g0200 a0001c0001t0005g0205 a0001c0001t0005g0230 a0001c0001t0005g0231 a0001c0001t0005g0232 a0001c0001t0006g0046 a0001c0001t0006g0047 a0001c0001t0006g0048 a0001c0001t0006g0049 a0001c0001t0006g0050 a0001c0001t0007g0105 a0001c0001t0007g0124 a0001c0001t0007g0125 a0001c0001t0007g0127 a0001c0001t0009g0010 a0001c0001t0009g0249 a0001c0001t0010g0029 a0001c0001t0011g0244 a0001c0001t0015g0225 a0001c0003t0013g0043 a0001c0003t0016g0218 a0002c0002t0001g0004 a0002c0002t0001g0139 a0002c0002t0001g0141 a0002c0002t0001g0142 a0002c0002t0001g0189 a0002c0002t0001g0245 a0002c0002t0001g0246 a0002c0002t0001g0247 a0002c0002t0001g0248 a0002c0002t0002g0006 a0002c0002t0002g0130 a0002c0002t0002g0131 a0002c0002t0002g0193 a0002c0002t0002g0201 a0002c0002t0003g0013 a0002c0002t0003g0056 a0002c0002t0003g0078 a0002c0002t0003g0152 a0002c0002t0003g0153 a0002c0002t0003g0154 a0002c0002t0003g0158 a0002c0002t0003g0170 a0002c0002t0003g0171 a0002c0002t0003g0176 a0002c0002t0003g0184 a0002c0002t0003g0185 a0002c0002t0008g0258 a0002c0002t0008g0259 a0002c0002t0008g0260 a0002c0002t0012g0261 a0002c0002t0014g0222 a0003c0006t0002g0238 a0003c0006t0002g0239 a0004c0005t0001g0028 a0004c0005t0002g0233 a0005c0004t0001g0073 a0005c0004t0001g0077 a0006c0008t0002g0212 a0008c0009t0002g0242 a0009c0011t0001g0161 a0010c0007t0001g0165	252	272	0.9265	4	c.106 others(23): Show c.106-14319_106-14318insAATG	APLP2	ENSG00000084234.18	transcript	ENST00000338167.10	protein_coding	1/16			chr11	TogoVar
APOA1_chr11_116830751_116842622	116831189	A A	ATTTC ATTTC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp1 HG00609.hp2 HG00621.hp2 others(37): Show HG00099.hp1 HG00609.hp2 HG00621.hp2 HG00639.hp2 HG01261.hp2 HG01433.hp2 HG02015.hp1 HG02129.hp1 HG02132.hp1 HG02148.hp2 HG02280.hp1 HG02293.hp1 HG02293.hp2 HG02486.hp1 HG02683.hp2 HG02723.hp1 HG02976.hp2 HG03139.hp2 HG03209.hp2 HG03490.hp1 HG03927.hp2 HG04228.hp1 NA18747.hp2 NA18939.hp1 NA18942.hp2 NA18944.hp1 NA18950.hp1 NA18950.hp2 NA18960.hp2 NA18968.hp1 NA18970.hp1 NA18979.hp1 NA18990.hp2 NA19007.hp2 NA19009.hp2 NA19010.hp2 NA19055.hp1 NA19065.hp1 NA19088.hp2 NA19090.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0007 a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0007	40	259	0.1544	4	c.46 others(15): Show c.4615_*4618dupGAAA	APOA1	ENSG00000118137.10	transcript	ENST00000236850.5	protein_coding		4561		chr11	TogoVar
APOA1_chr11_116830751_116842622	116831283	C C	CCTTT CCTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02647.hp2 HG02886.hp1 HG02970.hp2 HG02647.hp2 HG02886.hp1 HG02970.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0001 a0001c0001t0001g0002	3	346	0.0087	4	c.45 others(15): Show c.4521_*4524dupAAAG	APOA1	ENSG00000118137.10	transcript	ENST00000236850.5	protein_coding		4467		chr11	TogoVar
APOA1_chr11_116830751_116842622	116831309	C C	CTCTT CTCTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00438.hp1 HG00642.hp1 HG01074.hp1 others(51): Show HG00438.hp1 HG00642.hp1 HG01074.hp1 HG01099.hp2 HG01109.hp1 HG01123.hp2 HG01891.hp2 HG02027.hp1 HG02109.hp2 HG02135.hp1 HG02145.hp1 HG02257.hp2 HG02280.hp2 HG02615.hp1 HG02630.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp2 HG02809.hp1 HG02818.hp1 HG02818.hp2 HG02895.hp2 HG02896.hp2 HG02965.hp1 HG02970.hp1 HG03098.hp2 HG03130.hp1 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03516.hp1 HG03579.hp2 NA18522.hp2 NA18906.hp2 NA18944.hp2 NA18945.hp2 NA18947.hp1 NA18949.hp2 NA18951.hp1 NA18952.hp2 NA18960.hp1 NA18966.hp2 NA18967.hp2 NA18974.hp1 NA18979.hp2 NA18998.hp1 NA19000.hp2 NA19012.hp2 NA19030.hp2 NA19043.hp2 NA19059.hp1 NA19062.hp1 NA21309.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0001 a0001c0001t0001 a0002c0002t0001	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0004 others(2): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0014 a0002c0002t0001g0006	54	419	0.1289	4	c.44 others(15): Show c.4495_*4498dupAAGA	APOA1	ENSG00000118137.10	transcript	ENST00000236850.5	protein_coding		4441		chr11	TogoVar
APOA4_chr11_116815700_116828304	116818605	T T	TATAG TATAG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00140.hp1 HG00140.hp2 HG00741.hp2 others(11): Show HG00140.hp1 HG00140.hp2 HG00741.hp2 HG01071.hp2 HG01261.hp2 HG01516.hp2 HG01517.hp1 HG02602.hp1 HG03490.hp2 HG03492.hp1 HG03831.hp1 HG04228.hp1 NA20805.hp1 NA20905.hp1	a0003 a0003	a0003c0004 a0003c0007 a0003c0004 a0003c0007	a0003c0004t0001 a0003c0007t0001 a0003c0004t0001 a0003c0007t0001	a0003c0004t0001g0009 a0003c0007t0001g0012 a0003c0004t0001g0009 a0003c0007t0001g0012	14	460	0.0304	4	c.22 others(15): Show c.2261_*2262insCTAT	APOA4	ENSG00000110244.7	transcript	ENST00000357780.5	protein_coding		2094		chr11	TogoVar
APOA4_chr11_116815700_116828304	116818606	G G	GTATA GTATA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01256.hp2 HG01257.hp1 HG01884.hp1 others(19): Show HG01256.hp2 HG01257.hp1 HG01884.hp1 HG01891.hp2 HG01934.hp1 HG02040.hp1 HG02523.hp1 HG02683.hp2 HG02735.hp1 HG03139.hp1 HG03195.hp2 HG03471.hp2 HG03492.hp2 NA18941.hp1 NA18950.hp1 NA18953.hp1 NA19011.hp2 NA19060.hp2 NA19074.hp1 NA19082.hp1 NA19084.hp1 NA19089.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0001t0002 a0001c0003t0001 a0001c0001t0001 a0001c0001t0002 a0001c0003t0001	a0001c0001t0001g0003 a0001c0001t0001g0010 a0001c0001t0002g0001 others(1): Show a0001c0001t0001g0003 a0001c0001t0001g0010 a0001c0001t0002g0001 a0001c0003t0001g0005	22	390	0.0564	4	c.22 others(15): Show c.2260_*2261insTATA	APOA4	ENSG00000110244.7	transcript	ENST00000357780.5	protein_coding		2093		chr11	TogoVar
APOA4_chr11_116815700_116828304	116818608	G G	GTATA GTATA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01081.hp1 NA18972.hp1 NA18984.hp1 HG01081.hp1 NA18972.hp1 NA18984.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0003 a0001c0001t0001g0004	3	195	0.0154	4	c.22 others(15): Show c.2258_*2259insTATA	APOA4	ENSG00000110244.7	transcript	ENST00000357780.5	protein_coding		2091		chr11	TogoVar
APOA4_chr11_116815700_116828304	116818630	A A	ATATT ATATT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00423.hp2 HG02109.hp1 HG02109.hp2 others(7): Show HG00423.hp2 HG02109.hp1 HG02109.hp2 HG02145.hp2 HG02630.hp2 HG02738.hp2 HG02970.hp2 HG03225.hp2 HG03453.hp1 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0003 a0001c0001t0002g0001 a0001c0001t0001g0003 a0001c0001t0002g0001	10	290	0.0345	4	c.22 others(15): Show c.2236_*2237insAATA	APOA4	ENSG00000110244.7	transcript	ENST00000357780.5	protein_coding		2069		chr11	TogoVar
APOA4_chr11_116815700_116828304	116828132	A A	ATCTC ATCTC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01891.hp2 HG01928.hp1 HG02976.hp2 others(3): Show HG01891.hp2 HG01928.hp1 HG02976.hp2 HG03139.hp1 HG03195.hp2 NA18941.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0002c0002 a0001c0001 a0001c0003 a0002c0002	a0001c0001t0002 a0001c0003t0001 a0002c0002t0001 a0001c0001t0002 a0001c0003t0001 a0002c0002t0001	a0001c0001t0002g0001 a0001c0003t0001g0005 a0002c0002t0001g0002 a0001c0001t0002g0001 a0001c0003t0001g0005 a0002c0002t0001g0002	6	144	0.0417	4	c.-49 others(15): Show c.-4942_-4941insGAGA	APOA4	ENSG00000110244.7	transcript	ENST00000357780.5	protein_coding		4829		chr11	TogoVar
APOBEC1_chr12_7644400_7670908	7657043	C C	CGTGT CGTGT	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG01070.hp2 HG01167.hp1 others(16): Show HG00280.hp2 HG01070.hp2 HG01167.hp1 HG01261.hp1 HG02451.hp1 HG02698.hp1 HG03017.hp2 HG03098.hp1 HG03491.hp1 HG04199.hp1 NA18943.hp2 NA18968.hp1 NA18968.hp2 NA18977.hp1 NA18981.hp2 NA18983.hp1 NA19030.hp2 NA19058.hp1 NA20300.hp2	a0001 a0002 a0001 a0002	a0001c0002 a0001c0003 a0002c0001 a0001c0002 a0001c0003 a0002c0001	a0001c0002t0002 a0001c0003t0001 a0002c0001t0001 others(1): Show a0001c0002t0002 a0001c0003t0001 a0002c0001t0001 a0002c0001t0002	a0001c0002t0002g0037 a0001c0002t0002g0038 a0001c0003t0001g0034 others(15): Show a0001c0002t0002g0037 a0001c0002t0002g0038 a0001c0003t0001g0034 a0001c0003t0001g0306 a0001c0003t0001g0310 a0001c0003t0001g0312 a0001c0003t0001g0324 a0001c0003t0001g0325 a0001c0003t0001g0328 a0001c0003t0001g0333 a0001c0003t0001g0334 a0001c0003t0001g0347 a0001c0003t0001g0348 a0001c0003t0001g0349 a0001c0003t0001g0354 a0002c0001t0001g0261 a0002c0001t0001g0375 a0002c0001t0002g0373	19	123	0.1545	4	c.17- others(19): Show c.17-2415_17-2412dupACAC	APOBEC1	ENSG00000111701.7	transcript	ENST00000229304.5	protein_coding	1/4			chr12	TogoVar
APOBEC1_chr12_7644400_7670908	7659373	T T	TCACA TCACA	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG02109.hp2 HG02717.hp2 others(6): Show HG01891.hp1 HG02109.hp2 HG02717.hp2 HG02723.hp2 HG03471.hp2 NA18940.hp2 NA19240.hp1 NA20129.hp1 NA21309.hp1	a0001 a0002 a0001 a0002	a0001c0002 a0001c0003 a0002c0001 a0001c0002 a0001c0003 a0002c0001	a0001c0002t0001 a0001c0003t0001 a0002c0001t0001 a0001c0002t0001 a0001c0003t0001 a0002c0001t0001	a0001c0002t0001g0129 a0001c0003t0001g0114 a0001c0003t0001g0307 others(6): Show a0001c0002t0001g0129 a0001c0003t0001g0114 a0001c0003t0001g0307 a0001c0003t0001g0308 a0001c0003t0001g0319 a0001c0003t0001g0343 a0002c0001t0001g0036 a0002c0001t0001g0117 a0002c0001t0001g0341	9	310	0.0290	4	c.17- others(19): Show c.17-4745_17-4742dupTGTG	APOBEC1	ENSG00000111701.7	transcript	ENST00000229304.5	protein_coding	1/4			chr12	TogoVar
APOBEC1_chr12_7644400_7670908	7660371	G G	GGAAA GGAAA	intron_variant intron_variant	MODIFIER	HG01069.hp1 HG01106.hp2 HG01109.hp1 others(5): Show HG01069.hp1 HG01106.hp2 HG01109.hp1 HG01928.hp2 HG02129.hp2 HG02273.hp2 HG02818.hp1 NA18986.hp1	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0001 a0002c0001t0001	a0002c0001t0001g0145 a0002c0001t0001g0151 a0002c0001t0001g0203 others(5): Show a0002c0001t0001g0145 a0002c0001t0001g0151 a0002c0001t0001g0203 a0002c0001t0001g0204 a0002c0001t0001g0258 a0002c0001t0001g0259 a0002c0001t0001g0277 a0002c0001t0001g0278	8	348	0.0230	4	c.16+ others(19): Show c.16+5485_16+5486insTTTC	APOBEC1	ENSG00000111701.7	transcript	ENST00000229304.5	protein_coding	1/4			chr12	TogoVar
APOBEC1_chr12_7644400_7670908	7661487	T T	TGATA TGATA	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG01243.hp2 HG02602.hp1 others(11): Show HG00639.hp2 HG01243.hp2 HG02602.hp1 HG02717.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG03209.hp1 HG03471.hp2 HG03669.hp2 NA18940.hp1 NA18963.hp1 NA19067.hp2 NA19082.hp1	a0001 a0002 a0001 a0002	a0001c0003 a0002c0001 a0001c0003 a0002c0001	a0001c0003t0001 a0002c0001t0001 a0001c0003t0001 a0002c0001t0001	a0001c0003t0001g0062 a0001c0003t0001g0063 a0001c0003t0001g0064 others(11): Show a0001c0003t0001g0062 a0001c0003t0001g0063 a0001c0003t0001g0064 a0001c0003t0001g0065 a0001c0003t0001g0066 a0001c0003t0001g0067 a0001c0003t0001g0071 a0001c0003t0001g0075 a0001c0003t0001g0078 a0001c0003t0001g0084 a0001c0003t0001g0179 a0001c0003t0001g0292 a0002c0001t0001g0036 a0002c0001t0001g0117	14	50	0.2800	4	c.16+ others(19): Show c.16+4366_16+4369dupTATC	APOBEC1	ENSG00000111701.7	transcript	ENST00000229304.5	protein_coding	1/4			chr12	TogoVar
APOBEC1_chr12_7644400_7670908	7665752	G G	GACAC GACAC	intron_variant intron_variant	MODIFIER	HG00621.hp2 HG00741.hp1 HG01943.hp1 others(39): Show HG00621.hp2 HG00741.hp1 HG01943.hp1 HG02004.hp2 HG02027.hp1 HG02080.hp2 HG02083.hp2 HG02523.hp1 HG02559.hp2 HG02615.hp1 HG02735.hp2 HG02738.hp2 HG03017.hp2 HG03490.hp2 HG03491.hp1 HG03710.hp2 HG04184.hp2 HG04204.hp1 NA18952.hp1 NA18952.hp2 NA18954.hp2 NA18956.hp2 NA18959.hp1 NA18969.hp2 NA18978.hp1 NA18984.hp1 NA18986.hp2 NA18995.hp2 NA18999.hp1 NA19000.hp1 NA19005.hp2 NA19064.hp1 NA19065.hp2 NA19070.hp1 NA19070.hp2 NA19077.hp1 NA19077.hp2 NA19085.hp1 NA19087.hp1 NA19089.hp2 NA19090.hp1 NA20300.hp1	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0002 a0001c0003 a0002c0001 others(1): Show a0001c0002 a0001c0003 a0002c0001 a0004c0005	a0001c0002t0001 a0001c0003t0001 a0002c0001t0001 others(1): Show a0001c0002t0001 a0001c0003t0001 a0002c0001t0001 a0004c0005t0001	a0001c0002t0001g0211 a0001c0002t0001g0213 a0001c0002t0001g0215 others(36): Show a0001c0002t0001g0211 a0001c0002t0001g0213 a0001c0002t0001g0215 a0001c0002t0001g0216 a0001c0002t0001g0217 a0001c0002t0001g0218 a0001c0002t0001g0236 a0001c0002t0001g0330 a0001c0002t0001g0339 a0001c0002t0001g0340 a0001c0003t0001g0214 a0001c0003t0001g0331 a0001c0003t0001g0332 a0001c0003t0001g0333 a0001c0003t0001g0334 a0001c0003t0001g0335 a0001c0003t0001g0336 a0001c0003t0001g0337 a0001c0003t0001g0338 a0002c0001t0001g0009 a0002c0001t0001g0029 a0002c0001t0001g0219 a0002c0001t0001g0220 a0002c0001t0001g0221 a0002c0001t0001g0222 a0002c0001t0001g0223 a0002c0001t0001g0224 a0002c0001t0001g0225 a0002c0001t0001g0226 a0002c0001t0001g0227 a0002c0001t0001g0228 a0002c0001t0001g0229 a0002c0001t0001g0230 a0002c0001t0001g0231 a0002c0001t0001g0232 a0002c0001t0001g0233 a0002c0001t0001g0234 a0002c0001t0001g0235 a0004c0005t0001g0212	42	87	0.4828	4	c.16+ others(17): Show c.16+101_16+104dupGTGT	APOBEC1	ENSG00000111701.7	transcript	ENST00000229304.5	protein_coding	1/4			chr12	TogoVar
APOBEC2_chr6_41048202_41069891	41058286	C C	CCACA CCACA	intron_variant intron_variant	MODIFIER	HG02572.hp2 HG02970.hp2 NA19043.hp1 HG02572.hp2 HG02970.hp2 NA19043.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0001 a0001c0004t0001	a0001c0004t0001g0036 a0001c0004t0001g0097 a0001c0004t0001g0036 a0001c0004t0001g0097	3	357	0.0084	4	c.132 others(21): Show c.132-3023_132-3020dupCACA	APOBEC2	ENSG00000124701.6	transcript	ENST00000244669.3	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr6	TogoVar
APOBEC3A_chr22_38952609_38968184	38958391	T T	TTCCC TTCCC	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00280.hp1 HG00323.hp2 others(113): Show HG00099.hp1 HG00280.hp1 HG00323.hp2 HG00621.hp1 HG00741.hp2 HG01069.hp1 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01099.hp1 HG01109.hp2 HG01192.hp1 HG01243.hp2 HG01256.hp2 HG01257.hp1 HG01258.hp2 HG01261.hp2 HG01358.hp2 HG01496.hp1 HG01515.hp1 HG01516.hp1 HG01517.hp1 HG01884.hp2 HG01891.hp2 HG01975.hp2 HG02004.hp2 HG02027.hp2 HG02109.hp1 HG02109.hp2 HG02132.hp2 HG02135.hp1 HG02135.hp2 HG02145.hp2 HG02258.hp1 HG02559.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02647.hp2 HG02698.hp1 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02738.hp1 HG02818.hp2 HG02886.hp1 HG02895.hp2 HG02922.hp2 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG03017.hp1 HG03041.hp1 HG03098.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp2 HG03225.hp2 HG03471.hp2 HG03486.hp1 HG03516.hp1 HG03579.hp2 HG03831.hp2 HG04204.hp1 HG06807.hp2 NA18612.hp1 NA18612.hp2 NA18906.hp1 NA18942.hp1 NA18942.hp2 NA18945.hp2 NA18949.hp1 NA18950.hp2 NA18952.hp2 NA18954.hp1 NA18957.hp1 NA18964.hp2 NA18965.hp2 NA18966.hp2 NA18967.hp1 NA18974.hp2 NA18975.hp1 NA18977.hp1 NA18982.hp1 NA18982.hp2 NA18994.hp2 NA18998.hp2 NA19005.hp2 NA19009.hp1 NA19010.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp2 NA19055.hp1 NA19057.hp1 NA19058.hp1 NA19058.hp2 NA19063.hp1 NA19065.hp1 NA19067.hp1 NA19067.hp2 NA19074.hp1 NA19080.hp1 NA19080.hp2 NA19084.hp2 NA19090.hp2 NA19240.hp1 NA19240.hp2 NA20805.hp1 NA20905.hp1 NA21309.hp1	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0004 a0006	a0001c0002 a0001c0005 a0002c0007 others(4): Show a0001c0002 a0001c0005 a0002c0007 a0003c0006 a0004c0012 a0004c0013 a0006c0011	a0001c0002t0001 a0001c0002t0003 a0001c0005t0001 others(7): Show a0001c0002t0001 a0001c0002t0003 a0001c0005t0001 a0001c0005t0003 a0002c0007t0005 a0003c0006t0001 a0003c0006t0003 a0004c0012t0003 a0004c0013t0003 a0006c0011t0001	a0001c0002t0001g0001 a0001c0002t0001g0006 a0001c0002t0001g0015 others(23): Show a0001c0002t0001g0001 a0001c0002t0001g0006 a0001c0002t0001g0015 a0001c0002t0001g0021 a0001c0002t0001g0033 a0001c0002t0001g0034 a0001c0002t0001g0035 a0001c0002t0001g0036 a0001c0002t0001g0037 a0001c0002t0001g0038 a0001c0002t0001g0039 a0001c0002t0001g0040 a0001c0002t0003g0023 a0001c0005t0001g0009 a0001c0005t0001g0020 a0001c0005t0001g0021 a0001c0005t0001g0022 a0001c0005t0003g0032 a0002c0007t0005g0042 a0003c0006t0001g0013 a0003c0006t0001g0016 a0003c0006t0001g0041 a0003c0006t0003g0019 a0004c0012t0003g0031 a0004c0013t0003g0031 a0006c0011t0001g0001	116	358	0.3240	4	c.29+ others(17): Show c.29+679_29+682dupCTCC	APOBEC3A	ENSG00000128383.14	transcript	ENST00000249116.7	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr22	TogoVar
APOBEC3A_chr22_38952609_38968184	38958566	C C	CTTCT CTTCT	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00423.hp1 HG00597.hp1 others(111): Show HG00280.hp2 HG00423.hp1 HG00597.hp1 HG00597.hp2 HG00621.hp2 HG00642.hp1 HG00673.hp1 HG00735.hp1 HG01106.hp1 HG01109.hp1 HG01109.hp2 HG01175.hp1 HG01243.hp1 HG01256.hp1 HG01257.hp2 HG01258.hp1 HG01346.hp1 HG01346.hp2 HG01433.hp1 HG01515.hp2 HG01884.hp1 HG01884.hp2 HG01943.hp1 HG01975.hp1 HG02027.hp1 HG02040.hp1 HG02040.hp2 HG02109.hp1 HG02129.hp2 HG02145.hp1 HG02145.hp2 HG02165.hp2 HG02257.hp2 HG02258.hp2 HG02280.hp1 HG02300.hp2 HG02451.hp1 HG02523.hp2 HG02572.hp1 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp2 HG02647.hp2 HG02683.hp2 HG02717.hp2 HG02723.hp2 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp2 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG02976.hp2 HG03139.hp1 HG03195.hp1 HG03225.hp1 HG03453.hp1 HG03471.hp2 HG03486.hp1 HG03579.hp2 HG03654.hp1 HG03704.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp2 HG04115.hp2 HG04228.hp1 HG06807.hp1 NA18747.hp1 NA18906.hp2 NA18939.hp2 NA18944.hp2 NA18954.hp2 NA18955.hp2 NA18964.hp1 NA18965.hp1 NA18966.hp1 NA18967.hp2 NA18975.hp2 NA18977.hp2 NA18979.hp1 NA18980.hp1 NA18983.hp1 NA18983.hp2 NA18994.hp1 NA18998.hp1 NA19000.hp2 NA19009.hp2 NA19011.hp2 NA19012.hp2 NA19030.hp1 NA19043.hp2 NA19063.hp2 NA19064.hp1 NA19068.hp1 NA19068.hp2 NA19074.hp2 NA19079.hp1 NA19085.hp1 NA19085.hp2 NA20129.hp2 NA20300.hp1 NA20752.hp1 NA21309.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0002 a0001c0003 a0001c0005 others(5): Show a0001c0002 a0001c0003 a0001c0005 a0001c0009 a0002c0007 a0003c0006 a0004c0012 a0004c0013	a0001c0002t0001 a0001c0003t0001 a0001c0005t0001 others(6): Show a0001c0002t0001 a0001c0003t0001 a0001c0005t0001 a0001c0009t0001 a0002c0007t0002 a0003c0006t0001 a0003c0006t0003 a0004c0012t0003 a0004c0013t0003	a0001c0002t0001g0003 a0001c0002t0001g0008 a0001c0003t0001g0003 others(20): Show a0001c0002t0001g0003 a0001c0002t0001g0008 a0001c0003t0001g0003 a0001c0003t0001g0007 a0001c0003t0001g0008 a0001c0003t0001g0017 a0001c0003t0001g0018 a0001c0003t0001g0025 a0001c0003t0001g0030 a0001c0003t0001g0043 a0001c0003t0001g0044 a0001c0003t0001g0045 a0001c0003t0001g0053 a0001c0003t0001g0057 a0001c0005t0001g0009 a0001c0005t0001g0020 a0001c0005t0001g0029 a0001c0009t0001g0054 a0002c0007t0002g0024 a0003c0006t0001g0013 a0003c0006t0003g0019 a0004c0012t0003g0031 a0004c0013t0003g0031	114	350	0.3257	4	c.29+ others(17): Show c.29+850_29+853dupTTTC	APOBEC3A	ENSG00000128383.14	transcript	ENST00000249116.7	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr22	TogoVar
APOBEC3A_chr22_38952609_38968184	38958676	T T	TTTCC TTTCC	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG02559.hp2 HG02723.hp1 others(6): Show HG01109.hp2 HG02559.hp2 HG02723.hp1 HG02886.hp1 HG02895.hp2 HG03139.hp2 HG03471.hp2 NA19030.hp2 NA21309.hp1	a0001 a0003 a0001 a0003	a0001c0002 a0001c0005 a0003c0006 a0001c0002 a0001c0005 a0003c0006	a0001c0002t0001 a0001c0005t0001 a0003c0006t0001 a0001c0002t0001 a0001c0005t0001 a0003c0006t0001	a0001c0002t0001g0021 a0001c0005t0001g0021 a0001c0005t0001g0022 others(2): Show a0001c0002t0001g0021 a0001c0005t0001g0021 a0001c0005t0001g0022 a0003c0006t0001g0013 a0003c0006t0001g0041	9	358	0.0251	4	c.30- others(17): Show c.30-859_30-856dupCCTT	APOBEC3A	ENSG00000128383.14	transcript	ENST00000249116.7	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr22	TogoVar
APOBEC3A_chr22_38952609_38968184	38958769	C C	CTCTT CTCTT	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG00738.hp1 HG02698.hp2 others(2): Show HG00642.hp2 HG00738.hp1 HG02698.hp2 HG03491.hp2 HG03492.hp1	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0001 a0001c0005t0001 a0001c0001t0001 a0001c0005t0001	a0001c0001t0001g0011 a0001c0005t0001g0011 a0001c0001t0001g0011 a0001c0005t0001g0011	5	54	0.0926	4	c.30- others(17): Show c.30-746_30-743dupTTTC	APOBEC3A	ENSG00000128383.14	transcript	ENST00000249116.7	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr22	TogoVar
APOBEC3B_chr22_38977347_38997779	38978546	A A	AAAAC AAAAC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp1 HG00280.hp1 HG00558.hp1 others(77): Show HG00099.hp1 HG00280.hp1 HG00558.hp1 HG00609.hp1 HG00639.hp1 HG00639.hp2 HG00673.hp2 HG00735.hp2 HG00738.hp1 HG01069.hp1 HG01071.hp1 HG01123.hp1 HG01167.hp1 HG01515.hp2 HG01517.hp1 HG01884.hp2 HG01928.hp1 HG01934.hp1 HG01981.hp1 HG01993.hp1 HG02004.hp2 HG02040.hp1 HG02145.hp2 HG02148.hp2 HG02165.hp2 HG02257.hp2 HG02258.hp1 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02647.hp1 HG02647.hp2 HG02717.hp2 HG02738.hp2 HG02809.hp2 HG02886.hp2 HG02895.hp2 HG02897.hp1 HG02965.hp1 HG02976.hp1 HG03041.hp1 HG03041.hp2 HG03139.hp1 HG03453.hp2 HG03490.hp1 HG03492.hp1 HG03540.hp1 HG03579.hp2 HG03831.hp2 HG03927.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp2 HG06807.hp1 NA18949.hp1 NA18954.hp2 NA18971.hp1 NA18974.hp2 NA18975.hp2 NA18978.hp1 NA18980.hp2 NA18983.hp1 NA18994.hp1 NA19005.hp1 NA19006.hp1 NA19010.hp1 NA19059.hp2 NA19065.hp2 NA19070.hp2 NA19079.hp2 NA19083.hp2 NA19090.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20300.hp2 NA20752.hp2 NA20905.hp1 NA21309.hp1 NA21309.hp2	a0001 a0002 a0003 others(5): Show a0001 a0002 a0003 a0004 a0005 a0007 a0011 a0013	a0001c0001 a0001c0010 a0001c0016 others(12): Show a0001c0001 a0001c0010 a0001c0016 a0002c0002 a0002c0005 a0002c0024 a0003c0017 a0004c0004 a0004c0007 a0004c0019 a0005c0006 a0007c0012 a0007c0013 a0011c0025 a0013c0020	a0001c0001t0001 a0001c0001t0003 a0001c0010t0001 others(13): Show a0001c0001t0001 a0001c0001t0003 a0001c0010t0001 a0001c0016t0001 a0002c0002t0001 a0002c0005t0001 a0002c0024t0001 a0003c0017t0001 a0004c0004t0001 a0004c0007t0001 a0004c0019t0001 a0005c0006t0001 a0007c0012t0001 a0007c0013t0001 a0011c0025t0001 a0013c0020t0001	a0001c0001t0001g0004 a0001c0001t0001g0013 a0001c0001t0001g0064 others(54): Show a0001c0001t0001g0004 a0001c0001t0001g0013 a0001c0001t0001g0064 a0001c0001t0001g0071 a0001c0001t0001g0076 a0001c0001t0001g0112 a0001c0001t0003g0077 a0001c0010t0001g0161 a0001c0016t0001g0035 a0001c0016t0001g0165 a0002c0002t0001g0002 a0002c0002t0001g0003 a0002c0002t0001g0008 a0002c0002t0001g0009 a0002c0002t0001g0011 a0002c0002t0001g0037 a0002c0002t0001g0042 a0002c0002t0001g0044 a0002c0002t0001g0047 a0002c0002t0001g0048 a0002c0002t0001g0159 a0002c0002t0001g0166 a0002c0002t0001g0175 a0002c0002t0001g0179 a0002c0002t0001g0180 a0002c0002t0001g0182 a0002c0002t0001g0183 a0002c0002t0001g0197 a0002c0002t0001g0200 a0002c0005t0001g0036 a0002c0005t0001g0167 a0002c0005t0001g0187 a0002c0005t0001g0188 a0002c0005t0001g0189 a0002c0005t0001g0190 a0002c0005t0001g0191 a0002c0005t0001g0192 a0002c0005t0001g0194 a0002c0024t0001g0205 a0003c0017t0001g0174 a0004c0004t0001g0032 a0004c0004t0001g0033 a0004c0004t0001g0150 a0004c0004t0001g0151 a0004c0004t0001g0155 a0004c0007t0001g0019 a0004c0007t0001g0054 a0004c0007t0001g0055 a0004c0007t0001g0213 a0004c0019t0001g0134 a0004c0019t0001g0135 a0005c0006t0001g0137 a0005c0006t0001g0147 a0007c0012t0001g0007 a0007c0013t0001g0007 a0011c0025t0001g0193 a0013c0020t0001g0201	80	321	0.2492	4	c.-39 others(15): Show c.-3908_-3907insAAAC	APOBEC3B	ENSG00000179750.16	transcript	ENST00000333467.4	protein_coding		3800		chr22	TogoVar
APOBEC3B_chr22_38977347_38997779	38979542	G G	GTTTC GTTTC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01109.hp1 HG02040.hp1 HG02717.hp1 others(7): Show HG01109.hp1 HG02040.hp1 HG02717.hp1 HG02818.hp2 NA18522.hp2 NA18949.hp1 NA18978.hp1 NA18980.hp2 NA19005.hp1 NA19010.hp1	a0002 a0002	a0002c0002 a0002c0005 a0002c0002 a0002c0005	a0002c0002t0001 a0002c0005t0001 a0002c0002t0001 a0002c0005t0001	a0002c0002t0001g0002 a0002c0002t0001g0009 a0002c0002t0001g0181 others(7): Show a0002c0002t0001g0002 a0002c0002t0001g0009 a0002c0002t0001g0181 a0002c0002t0001g0195 a0002c0005t0001g0187 a0002c0005t0001g0188 a0002c0005t0001g0189 a0002c0005t0001g0190 a0002c0005t0001g0191 a0002c0005t0001g0194	10	350	0.0286	4	c.-29 others(15): Show c.-2912_-2911insTTTC	APOBEC3B	ENSG00000179750.16	transcript	ENST00000333467.4	protein_coding		2804		chr22	TogoVar
APOBEC3B_chr22_38977347_38997779	38988664	C C	CCTCT CCTCT	intron_variant intron_variant	MODIFIER	HG02280.hp1 HG02572.hp2 HG02630.hp2 others(8): Show HG02280.hp1 HG02572.hp2 HG02630.hp2 HG02818.hp1 HG02922.hp2 HG03098.hp1 HG03130.hp1 HG03195.hp1 HG03486.hp1 HG03516.hp1 NA19030.hp1	a0005 a0008 a0005 a0008	a0005c0006 a0008c0009 a0005c0006 a0008c0009	a0005c0006t0001 a0008c0009t0001 a0005c0006t0001 a0008c0009t0001	a0005c0006t0001g0034 a0005c0006t0001g0140 a0005c0006t0001g0141 others(7): Show a0005c0006t0001g0034 a0005c0006t0001g0140 a0005c0006t0001g0141 a0005c0006t0001g0142 a0005c0006t0001g0163 a0008c0009t0001g0060 a0008c0009t0001g0061 a0008c0009t0001g0062 a0008c0009t0001g0214 a0008c0009t0001g0215	11	351	0.0313	4	c.570 others(19): Show c.570-788_570-785dupCTCT	APOBEC3B	ENSG00000179750.16	transcript	ENST00000333467.4	protein_coding	4/7		INFO_REALIGN_3_PRIME	chr22	TogoVar
APOBEC3C_chr22_39009257_39025352	39019798	C C	CTTTT CTTTT	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01243.hp1 HG01256.hp1 HG01515.hp1 others(21): Show HG01243.hp1 HG01256.hp1 HG01515.hp1 HG01943.hp1 HG02145.hp2 HG02647.hp2 HG02698.hp1 HG02818.hp2 HG02897.hp2 HG03579.hp2 NA18943.hp2 NA18949.hp1 NA18981.hp2 NA18985.hp1 NA19000.hp1 NA19005.hp2 NA19009.hp1 NA19010.hp1 NA19057.hp1 NA19066.hp1 NA19070.hp2 NA19074.hp2 NA19080.hp2 NA20129.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0012 a0001c0001t0019 a0001c0001t0023 others(5): Show a0001c0001t0012 a0001c0001t0019 a0001c0001t0023 a0001c0001t0048 a0001c0001t0051 a0001c0001t0062 a0002c0002t0067 a0002c0002t0070	a0001c0001t0012g0002 a0001c0001t0012g0003 a0001c0001t0012g0030 others(13): Show a0001c0001t0012g0002 a0001c0001t0012g0003 a0001c0001t0012g0030 a0001c0001t0012g0034 a0001c0001t0012g0041 a0001c0001t0012g0089 a0001c0001t0019g0002 a0001c0001t0019g0003 a0001c0001t0023g0027 a0001c0001t0023g0044 a0001c0001t0023g0113 a0001c0001t0048g0032 a0001c0001t0051g0087 a0001c0001t0062g0001 a0002c0002t0067g0020 a0002c0002t0070g0020	24	107	0.2243	4	c.14 others(15): Show c.1432_*1435dupTTTT	APOBEC3C	ENSG00000244509.4	transcript	ENST00000361441.5	protein_coding	4/4	1436	INFO_REALIGN_3_PRIME	chr22	TogoVar
APOBEC3D_chr22_39016127_39038277	39019798	C C	CTTTT CTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01243.hp1 HG01256.hp2 HG01515.hp1 others(18): Show HG01243.hp1 HG01256.hp2 HG01515.hp1 HG01943.hp2 HG02145.hp1 HG02647.hp2 HG02698.hp2 HG02818.hp1 HG02897.hp2 HG03579.hp1 NA18949.hp2 NA18981.hp1 NA18985.hp2 NA19000.hp1 NA19005.hp1 NA19009.hp2 NA19010.hp2 NA19057.hp2 NA19070.hp1 NA19078.hp1 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0006 a0001c0001 a0001c0006	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(7): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0009 a0001c0001t0015 a0001c0001t0019 a0001c0001t0026 a0001c0001t0034 a0001c0001t0036 a0001c0006t0019	a0001c0001t0001g0001 a0001c0001t0001g0020 a0001c0001t0001g0156 others(12): Show a0001c0001t0001g0001 a0001c0001t0001g0020 a0001c0001t0001g0156 a0001c0001t0001g0162 a0001c0001t0002g0063 a0001c0001t0002g0083 a0001c0001t0002g0158 a0001c0001t0004g0179 a0001c0001t0009g0001 a0001c0001t0015g0036 a0001c0001t0019g0012 a0001c0001t0026g0001 a0001c0001t0034g0026 a0001c0001t0036g0187 a0001c0006t0019g0012	21	103	0.2039	4	c.-17 others(15): Show c.-1722_-1721insTTTT	APOBEC3D	ENSG00000243811.12	transcript	ENST00000216099.13	protein_coding		1328		chr22	TogoVar
APOBEC3F_chr22_39035864_39060972	39040384	G G	GTCCC GTCCC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03704.hp2 HG03927.hp2 HG03942.hp1 HG03704.hp2 HG03927.hp2 HG03942.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0008 a0001c0001t0002 a0001c0001t0008	a0001c0001t0002g0001 a0001c0001t0008g0001 a0001c0001t0002g0001 a0001c0001t0008g0001	3	420	0.0071	4	c.-57 others(13): Show c.-577_-576insTCCC	APOBEC3F	ENSG00000128394.17	transcript	ENST00000308521.10	protein_coding		479		chr22	TogoVar
APOBEC3F_chr22_39035864_39060972	39057005	G G	GTTTT GTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00423.hp1 HG00621.hp1 HG00621.hp2 others(60): Show HG00423.hp1 HG00621.hp1 HG00621.hp2 HG00642.hp1 HG01106.hp2 HG01175.hp1 HG01358.hp1 HG01358.hp2 HG01361.hp1 HG01891.hp1 HG01891.hp2 HG01928.hp1 HG01978.hp1 HG02027.hp2 HG02080.hp2 HG02083.hp2 HG02135.hp2 HG02145.hp1 HG02148.hp2 HG02165.hp2 HG02273.hp1 HG02293.hp2 HG02300.hp1 HG02486.hp1 HG02523.hp2 HG02622.hp1 HG02647.hp1 HG03471.hp1 HG03540.hp2 HG03942.hp2 HG04115.hp2 HG04184.hp1 NA18612.hp1 NA18949.hp1 NA18950.hp1 NA18954.hp2 NA18960.hp1 NA18960.hp2 NA18964.hp2 NA18972.hp1 NA18974.hp1 NA18974.hp2 NA18978.hp1 NA18979.hp1 NA18980.hp1 NA18985.hp1 NA18985.hp2 NA18993.hp2 NA18995.hp1 NA18997.hp1 NA19003.hp1 NA19005.hp1 NA19005.hp2 NA19057.hp1 NA19063.hp1 NA19076.hp2 NA19082.hp1 NA19082.hp2 NA19083.hp2 NA19084.hp2 NA19086.hp2 NA19089.hp1 NA19090.hp2	a0001 a0002 a0007 a0001 a0002 a0007	a0001c0001 a0001c0004 a0001c0019 others(2): Show a0001c0001 a0001c0004 a0001c0019 a0002c0010 a0007c0009	a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 others(7): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0019 a0001c0001t0038 a0001c0004t0002 a0001c0004t0003 a0001c0019t0003 a0002c0010t0055 a0007c0009t0002	a0001c0001t0002g0001 a0001c0001t0002g0007 a0001c0001t0002g0009 others(34): Show a0001c0001t0002g0001 a0001c0001t0002g0007 a0001c0001t0002g0009 a0001c0001t0002g0015 a0001c0001t0002g0020 a0001c0001t0002g0021 a0001c0001t0002g0030 a0001c0001t0002g0032 a0001c0001t0002g0033 a0001c0001t0002g0075 a0001c0001t0002g0104 a0001c0001t0002g0113 a0001c0001t0003g0002 a0001c0001t0003g0014 a0001c0001t0003g0028 a0001c0001t0003g0067 a0001c0001t0003g0074 a0001c0001t0003g0093 a0001c0001t0003g0098 a0001c0001t0003g0105 a0001c0001t0003g0106 a0001c0001t0003g0109 a0001c0001t0003g0110 a0001c0001t0003g0111 a0001c0001t0005g0001 a0001c0001t0005g0081 a0001c0001t0019g0007 a0001c0001t0038g0059 a0001c0004t0002g0013 a0001c0004t0002g0060 a0001c0004t0003g0013 a0001c0004t0003g0014 a0001c0004t0003g0063 a0001c0004t0003g0065 a0001c0019t0003g0062 a0002c0010t0055g0119 a0007c0009t0002g0001	63	70	0.9000	4	c.43 others(15): Show c.4310_*4311insTTTT	APOBEC3F	ENSG00000128394.17	transcript	ENST00000308521.10	protein_coding		1034		chr22	TogoVar
APOBEC3F_chr22_39035864_39060972	39057617	A A	AGAGT AGAGT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01243.hp2 HG01433.hp1 HG02258.hp1 others(7): Show HG01243.hp2 HG01433.hp1 HG02258.hp1 HG02559.hp1 HG02630.hp1 HG02818.hp1 HG02976.hp1 HG03225.hp1 NA20129.hp1 NA21309.hp2	a0003 a0003	a0003c0005 a0003c0017 a0003c0020 a0003c0005 a0003c0017 a0003c0020	a0003c0005t0009 a0003c0005t0011 a0003c0017t0026 others(1): Show a0003c0005t0009 a0003c0005t0011 a0003c0017t0026 a0003c0020t0027	a0003c0005t0009g0010 a0003c0005t0009g0137 a0003c0005t0011g0010 others(3): Show a0003c0005t0009g0010 a0003c0005t0009g0137 a0003c0005t0011g0010 a0003c0005t0011g0136 a0003c0017t0026g0057 a0003c0020t0027g0135	10	420	0.0238	4	c.49 others(15): Show c.4922_*4923insGAGT	APOBEC3F	ENSG00000128394.17	transcript	ENST00000308521.10	protein_coding		1646		chr22	TogoVar
APOBEC3G_chr22_39072275_39092743	39088670	G G	GCACA GCACA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01243.hp2 HG02109.hp2 HG02257.hp2 others(6): Show HG01243.hp2 HG02109.hp2 HG02257.hp2 HG02615.hp1 HG03098.hp1 HG03453.hp2 HG03579.hp2 HG06807.hp1 NA18522.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0006 a0002c0003 a0001c0001 a0001c0006 a0002c0003	a0001c0001t0001 a0001c0006t0001 a0002c0003t0001 a0001c0001t0001 a0001c0006t0001 a0002c0003t0001	a0001c0001t0001g0020 a0001c0001t0001g0092 a0001c0006t0001g0031 others(2): Show a0001c0001t0001g0020 a0001c0001t0001g0092 a0001c0006t0001g0031 a0001c0006t0001g0074 a0002c0003t0001g0030	9	133	0.0677	4	c.12 others(15): Show c.1249_*1250insCACA	APOBEC3G	ENSG00000239713.9	transcript	ENST00000407997.4	protein_coding		928		chr22	TogoVar

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