view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ATG10_chr5_81967023_82261133 | 81993336 | C | CTTCT | intron_variant | MODIFIER | HG01099.hp2 HG02738.hp1 |
a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0127 a0001c0001t0003g0144 |
2 | 226 | 0.0089 | 4 | c.108 others(21): Show |
ATG10 | ENSG00000152348.16 | transcript | ENST00000282185.8 | protein_coding | 2/7 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
ATG10_chr5_81967023_82261133 | 82024296 | G | GTAGA | intron_variant | MODIFIER | HG00099.hp1 HG00280.hp2 HG00323.hp1 others(128): Show |
a0001a0002a0003others(3): Show | a0001c0001a0002c0002a0003c0003others(3): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0019others(31): Show | a0001c0001t0001g0108 a0001c0001t0001g0192 a0001c0001t0001g0211 others(128): Show |
131 | 226 | 0.5797 | 4 | c.109 others(23): Show |
ATG10 | ENSG00000152348.16 | transcript | ENST00000282185.8 | protein_coding | 2/7 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
ATG10_chr5_81967023_82261133 | 82027075 | A | AAAAT | intron_variant | MODIFIER | HG00741.hp2 HG01109.hp1 HG01891.hp1 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0009others(1): Show | a0001c0001t0001g0192 a0001c0001t0003g0223 a0001c0001t0003g0224 others(6): Show |
9 | 226 | 0.0398 | 4 | c.109 others(23): Show |
ATG10 | ENSG00000152348.16 | transcript | ENST00000282185.8 | protein_coding | 2/7 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
ATG10_chr5_81967023_82261133 | 82037129 | C | CAAAA | intron_variant | MODIFIER | HG01243.hp2 HG02602.hp2 HG02738.hp1 others(7): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0009others(1): Show | a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0133 others(7): Show |
10 | 226 | 0.0443 | 4 | c.109 others(23): Show |
ATG10 | ENSG00000152348.16 | transcript | ENST00000282185.8 | protein_coding | 2/7 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
ATG10_chr5_81967023_82261133 | 82037234 | C | CTTTT | intron_variant | MODIFIER | HG01109.hp1 HG02080.hp1 HG02132.hp2 others(8): Show |
a0001a0003 | a0001c0001a0003c0003 | a0001c0001t0003a0001c0001t0024a0003c0003t0001others(2): Show | a0001c0001t0003g0224 a0001c0001t0003g0225 a0001c0001t0003g0226 others(8): Show |
11 | 226 | 0.0487 | 4 | c.109 others(23): Show |
ATG10 | ENSG00000152348.16 | transcript | ENST00000282185.8 | protein_coding | 2/7 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
ATG10_chr5_81967023_82261133 | 82061779 | C | CATAT | intron_variant | MODIFIER | HG00597.hp2 HG00639.hp1 HG00738.hp2 others(54): Show |
a0001a0002a0003others(2): Show | a0001c0001a0002c0002a0003c0003others(2): Show | a0001c0001t0001a0001c0001t0012a0001c0001t0020others(15): Show | a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0001g0159 others(54): Show |
57 | 226 | 0.2522 | 4 | c.216 others(21): Show |
ATG10 | ENSG00000152348.16 | transcript | ENST00000282185.8 | protein_coding | 3/7 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
ATG10_chr5_81967023_82261133 | 82099372 | T | TTAAG | intron_variant | MODIFIER | HG00099.hp2 HG00280.hp1 HG00597.hp2 others(114): Show |
a0001a0002a0003others(3): Show | a0001c0001a0002c0002a0003c0003others(3): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(29): Show | a0001c0001t0001g0009 a0001c0001t0001g0050 a0001c0001t0001g0131 others(114): Show |
117 | 226 | 0.5177 | 4 | c.216 others(23): Show |
ATG10 | ENSG00000152348.16 | transcript | ENST00000282185.8 | protein_coding | 3/7 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
ATG10_chr5_81967023_82261133 | 82118387 | C | CATAT | intron_variant | MODIFIER | HG00099.hp1 HG00280.hp2 HG00597.hp1 others(67): Show |
a0001a0002a0005 | a0001c0001a0002c0002a0005c0005 | a0001c0001t0001a0001c0001t0003a0001c0001t0019others(14): Show | a0001c0001t0001g0108 a0001c0001t0001g0211 a0001c0001t0003g0051 others(67): Show |
70 | 226 | 0.3097 | 4 | c.217 others(23): Show |
ATG10 | ENSG00000152348.16 | transcript | ENST00000282185.8 | protein_coding | 3/7 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
ATG10_chr5_81967023_82261133 | 82119984 | T | TTGTG | intron_variant | MODIFIER | HG00323.hp1 HG01346.hp1 HG01981.hp1 others(3): Show |
a0001a0002a0005 | a0001c0001a0002c0002a0005c0005 | a0001c0001t0011a0002c0002t0034a0005c0005t0010 | a0001c0001t0011g0101 a0002c0002t0034g0086 a0005c0005t0010g0001 others(3): Show |
6 | 226 | 0.0266 | 4 | c.217 others(23): Show |
ATG10 | ENSG00000152348.16 | transcript | ENST00000282185.8 | protein_coding | 3/7 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
ATG10_chr5_81967023_82261133 | 82150046 | A | ATAAT | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00280.hp1 others(216): Show |
a0001a0002a0003others(5): Show | a0001c0001a0002c0002a0003c0003others(5): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(52): Show | a0001c0001t0001g0009 a0001c0001t0001g0050 a0001c0001t0001g0108 others(216): Show |
219 | 226 | 0.9690 | 4 | c.217 others(23): Show |
ATG10 | ENSG00000152348.16 | transcript | ENST00000282185.8 | protein_coding | 3/7 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
ATG10_chr5_81967023_82261133 | 82161696 | A | AACAC | intron_variant | MODIFIER | HG01109.hp1 HG01167.hp1 HG01169.hp2 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0011 | a0001c0001t0003g0105 a0001c0001t0003g0106 a0001c0001t0003g0224 others(4): Show |
7 | 226 | 0.0310 | 4 | c.217 others(21): Show |
ATG10 | ENSG00000152348.16 | transcript | ENST00000282185.8 | protein_coding | 3/7 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
ATG10_chr5_81967023_82261133 | 82197459 | T | TCTAC | intron_variant | MODIFIER | HG01081.hp2 HG01884.hp2 HG02965.hp1 others(2): Show |
a0001a0002a0003others(1): Show | a0001c0001a0002c0002a0003c0003others(1): Show | a0001c0001t0005a0001c0001t0041a0002c0002t0040others(2): Show | a0001c0001t0005g0021 a0001c0001t0041g0012 a0002c0002t0040g0004 others(2): Show |
5 | 226 | 0.0221 | 4 | c.453 others(23): Show |
ATG10 | ENSG00000152348.16 | transcript | ENST00000282185.8 | protein_coding | 5/7 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
ATG10_chr5_81967023_82261133 | 82197720 | T | TTCTA | intron_variant | MODIFIER | HG00323.hp1 HG00741.hp1 HG01081.hp2 others(27): Show |
a0001a0002a0003others(2): Show | a0001c0001a0002c0002a0003c0003others(2): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(17): Show | a0001c0001t0001g0132 a0001c0001t0001g0134 a0001c0001t0001g0211 others(27): Show |
30 | 226 | 0.1327 | 4 | c.453 others(23): Show |
ATG10 | ENSG00000152348.16 | transcript | ENST00000282185.8 | protein_coding | 5/7 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
ATG10_chr5_81967023_82261133 | 82200864 | A | ATTAT | intron_variant | MODIFIER | HG00099.hp2 HG00280.hp1 HG00323.hp2 others(49): Show |
a0001a0002a0003others(4): Show | a0001c0001a0002c0002a0003c0003others(4): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(19): Show | a0001c0001t0001g0009 a0001c0001t0001g0166 a0001c0001t0001g0167 others(49): Show |
52 | 226 | 0.2301 | 4 | c.453 others(23): Show |
ATG10 | ENSG00000152348.16 | transcript | ENST00000282185.8 | protein_coding | 5/7 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
ATG10_chr5_81967023_82261133 | 82218052 | T | TACAC | intron_variant | MODIFIER | HG00639.hp1 HG00735.hp1 HG00738.hp2 others(41): Show |
a0001a0002a0003others(3): Show | a0001c0001a0002c0002a0003c0003others(3): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0009others(16): Show | a0001c0001t0001g0009 a0001c0001t0001g0050 a0001c0001t0001g0139 others(41): Show |
44 | 226 | 0.1947 | 4 | c.454 others(23): Show |
ATG10 | ENSG00000152348.16 | transcript | ENST00000282185.8 | protein_coding | 5/7 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
ATG10_chr5_81967023_82261133 | 82258913 | T | TTATA | downstream_gene_variant | MODIFIER | HG00735.hp1 HG01099.hp2 HG01243.hp1 others(8): Show |
a0001a0003a0006 | a0001c0001a0003c0003a0006c0006 | a0001c0001t0003a0001c0001t0009a0001c0001t0014others(3): Show | a0001c0001t0003g0058 a0001c0001t0003g0111 a0001c0001t0003g0127 others(8): Show |
11 | 226 | 0.0487 | 4 | c.*48 others(15): Show |
ATG10 | ENSG00000152348.16 | transcript | ENST00000282185.8 | protein_coding | 2781 | chr5 | TogoVar | |||||||
ATG10_chr5_81967023_82261133 | 82258928 | T | TATAC | downstream_gene_variant | MODIFIER | HG00099.hp1 HG00280.hp2 HG00323.hp2 others(80): Show |
a0002a0004 | a0002c0002a0004c0004 | a0002c0002t0002a0002c0002t0004a0002c0002t0006others(17): Show | a0002c0002t0002g0053 a0002c0002t0002g0054 a0002c0002t0002g0055 others(80): Show |
83 | 226 | 0.3673 | 4 | c.*48 others(15): Show |
ATG10 | ENSG00000152348.16 | transcript | ENST00000282185.8 | protein_coding | 2796 | chr5 | TogoVar | |||||||
ATG12_chr5_115823200_115846565 | 115824650 | G | GCTAT | downstream_gene_variant | MODIFIER | HG00099.hp2 HG00140.hp2 HG00280.hp1 others(193): Show |
a0001a0004 | a0001c0001a0004c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(35): Show | a0001c0001t0001g0010 a0001c0001t0001g0024 a0001c0001t0001g0045 others(84): Show |
196 | 402 | 0.4876 | 4 | c.*71 others(15): Show |
ATG12 | ENSG00000145782.13 | transcript | ENST00000509910.2 | protein_coding | 3549 | chr5 | TogoVar | |||||||
ATG13_chr11_46612553_46679518 | 46622076 | C | CATAT | intron_variant | MODIFIER | HG00140.hp1 HG00673.hp1 HG01243.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0095 a0001c0001t0001g0158 a0001c0001t0001g0161 others(3): Show |
6 | 218 | 0.0275 | 4 | c.-70 others(21): Show |
ATG13 | ENSG00000175224.17 | transcript | ENST00000683050.1 | protein_coding | 1/18 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
ATG13_chr11_46612553_46679518 | 46622125 | A | ATATT | intron_variant | MODIFIER | HG01884.hp1 HG02615.hp2 NA18978.hp2 |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0001t0015a0001c0003t0005 | a0001c0001t0001g0100 a0001c0001t0015g0077 a0001c0003t0005g0211 |
3 | 218 | 0.0138 | 4 | c.-70 others(21): Show |
ATG13 | ENSG00000175224.17 | transcript | ENST00000683050.1 | protein_coding | 1/18 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
ATG13_chr11_46612553_46679518 | 46630568 | C | CTTTT | intron_variant | MODIFIER | HG00609.hp1 HG00735.hp1 HG01070.hp2 others(100): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(13): Show | a0001c0001t0001g0063 a0001c0001t0001g0066 a0001c0001t0001g0067 others(99): Show |
103 | 218 | 0.4725 | 4 | c.-14 others(19): Show |
ATG13 | ENSG00000175224.17 | transcript | ENST00000683050.1 | protein_coding | 2/18 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
ATG13_chr11_46612553_46679518 | 46654281 | T | TTATA | intron_variant | MODIFIER | HG00735.hp1 HG01070.hp2 HG01081.hp1 others(9): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0019 | a0001c0001t0002g0001 a0001c0001t0002g0008 a0001c0001t0002g0010 others(8): Show |
12 | 218 | 0.0551 | 4 | c.459 others(21): Show |
ATG13 | ENSG00000175224.17 | transcript | ENST00000683050.1 | protein_coding | 7/18 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
ATG13_chr11_46612553_46679518 | 46654283 | T | TTATA | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00673.hp1 others(17): Show |
a0001a0003 | a0001c0001a0003c0007 | a0001c0001t0001a0001c0001t0010a0003c0007t0001 | a0001c0001t0001g0076 a0001c0001t0001g0080 a0001c0001t0001g0085 others(17): Show |
20 | 218 | 0.0917 | 4 | c.459 others(21): Show |
ATG13 | ENSG00000175224.17 | transcript | ENST00000683050.1 | protein_coding | 7/18 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
ATG13_chr11_46612553_46679518 | 46676471 | G | GTCTC | downstream_gene_variant | MODIFIER | HG01243.hp1 HG01884.hp2 HG02258.hp1 others(13): Show |
a0001 | a0001c0001 | a0001c0001t0004a0001c0001t0009 | a0001c0001t0004g0028 a0001c0001t0004g0029 a0001c0001t0004g0030 others(13): Show |
16 | 218 | 0.0734 | 4 | c.*41 others(15): Show |
ATG13 | ENSG00000175224.17 | transcript | ENST00000683050.1 | protein_coding | 1954 | chr11 | TogoVar | |||||||
ATG14_chr14_55361391_55416830 | 55363023 | C | CTCTT | downstream_gene_variant | MODIFIER | HG00140.hp2 HG00280.hp1 HG00323.hp1 others(40): Show |
a0001 | a0001c0001a0001c0002a0001c0004 | a0001c0001t0002a0001c0001t0017a0001c0002t0002others(2): Show | a0001c0001t0002g0003 a0001c0001t0002g0084 a0001c0001t0002g0133 others(39): Show |
43 | 366 | 0.1175 | 4 | c.*65 others(15): Show |
ATG14 | ENSG00000126775.9 | transcript | ENST00000247178.6 | protein_coding | 3367 | chr14 | TogoVar | |||||||
ATG14_chr14_55361391_55416830 | 55366642 | C | CTTAG | 3_prime_UTR_variant | MODIFIER | HG00140.hp2 HG00280.hp1 HG00323.hp1 others(224): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0002a0001c0004others(6): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0004others(39): Show | a0001c0001t0002g0003 a0001c0001t0002g0029 a0001c0001t0002g0033 others(214): Show |
227 | 366 | 0.6202 | 4 | c.*29 others(15): Show |
ATG14 | ENSG00000126775.9 | transcript | ENST00000247178.6 | protein_coding | 10/10 | 2976 | chr14 | TogoVar | ||||||
ATG14_chr14_55361391_55416830 | 55369281 | A | ATATC | 3_prime_UTR_variant | MODIFIER | HG00597.hp2 HG00735.hp2 HG01070.hp1 others(35): Show |
a0001a0003a0004 | a0001c0001a0003c0006a0004c0005 | a0001c0001t0003a0001c0001t0015a0001c0001t0024others(3): Show | a0001c0001t0003g0015 a0001c0001t0003g0113 a0001c0001t0003g0121 others(34): Show |
38 | 366 | 0.1038 | 4 | c.*33 others(13): Show |
ATG14 | ENSG00000126775.9 | transcript | ENST00000247178.6 | protein_coding | 10/10 | 337 | chr14 | TogoVar | ||||||
ATG14_chr14_55361391_55416830 | 55395365 | G | GTTTT | intron_variant | MODIFIER | HG00140.hp2 HG00280.hp1 HG00323.hp1 others(133): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0004others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(16): Show | a0001c0001t0001g0157 a0001c0001t0002g0003 a0001c0001t0002g0029 others(126): Show |
136 | 366 | 0.3716 | 4 | c.327 others(19): Show |
ATG14 | ENSG00000126775.9 | transcript | ENST00000247178.6 | protein_coding | 3/9 | chr14 | TogoVar | |||||||
ATG14_chr14_55361391_55416830 | 55410920 | G | GCTCT | intron_variant | MODIFIER | HG00280.hp1 HG00323.hp1 HG00323.hp2 others(159): Show |
a0001a0003a0004 | a0001c0001a0001c0002a0001c0004others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(24): Show | a0001c0001t0001g0007 a0001c0001t0001g0101 a0001c0001t0001g0110 others(152): Show |
162 | 366 | 0.4426 | 4 | c.221 others(19): Show |
ATG14 | ENSG00000126775.9 | transcript | ENST00000247178.6 | protein_coding | 1/9 | chr14 | TogoVar | |||||||
ATG16L1_chr2_233246673_233300669 | 233246882 | A | AAAAT | upstream_gene_variant | MODIFIER | HG00621.hp1 HG02074.hp1 HG02083.hp2 others(22): Show |
a0001a0002a0003 | a0001c0001a0002c0002a0003c0003 | a0001c0001t0001a0001c0001t0003a0001c0001t0007others(5): Show | a0001c0001t0001g0053 a0001c0001t0003g0007 a0001c0001t0003g0181 others(15): Show |
25 | 354 | 0.0706 | 4 | c.-49 others(15): Show |
ATG16L1 | ENSG00000085978.22 | transcript | ENST00000392017.9 | protein_coding | 4790 | chr2 | TogoVar | |||||||
ATG16L1_chr2_233246673_233300669 | 233253332 | G | GTTTT | intron_variant | MODIFIER | HG00673.hp1 HG01346.hp2 HG02071.hp2 others(9): Show |
a0002 | a0002c0002 | a0002c0002t0002a0002c0002t0005a0002c0002t0006 | a0002c0002t0002g0276 a0002c0002t0002g0280 a0002c0002t0002g0281 others(6): Show |
12 | 354 | 0.0339 | 4 | c.115 others(21): Show |
ATG16L1 | ENSG00000085978.22 | transcript | ENST00000392017.9 | protein_coding | 1/17 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
ATG16L1_chr2_233246673_233300669 | 233253340 | G | GTTTT | intron_variant | MODIFIER | HG01168.hp2 HG01978.hp1 HG02080.hp1 others(15): Show |
a0001 | a0001c0001a0001c0005 | a0001c0001t0003a0001c0005t0003 | a0001c0001t0003g0007 a0001c0001t0003g0175 a0001c0001t0003g0176 others(12): Show |
18 | 354 | 0.0509 | 4 | c.115 others(21): Show |
ATG16L1 | ENSG00000085978.22 | transcript | ENST00000392017.9 | protein_coding | 1/17 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
ATG16L1_chr2_233246673_233300669 | 233289377 | A | ATGTG | intron_variant | MODIFIER | HG02080.hp2 HG02486.hp2 HG03486.hp2 others(1): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0001c0001t0003a0002c0002t0015 | a0001c0001t0001g0051 a0001c0001t0001g0065 a0001c0001t0003g0098 others(1): Show |
4 | 354 | 0.0113 | 4 | c.120 others(21): Show |
ATG16L1 | ENSG00000085978.22 | transcript | ENST00000392017.9 | protein_coding | 12/17 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
ATG16L1_chr2_233246673_233300669 | 233296608 | G | GGTGT | downstream_gene_variant | MODIFIER | HG02055.hp2 HG02080.hp2 HG02280.hp1 others(10): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003 | a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0038 others(8): Show |
13 | 354 | 0.0367 | 4 | c.*22 others(15): Show |
ATG16L1 | ENSG00000085978.22 | transcript | ENST00000392017.9 | protein_coding | 940 | chr2 | TogoVar | |||||||
ATG16L1_chr2_233246673_233300669 | 233296669 | A | ATATG | downstream_gene_variant | MODIFIER | HG00673.hp1 HG01257.hp1 HG01496.hp2 others(46): Show |
a0002a0004 | a0002c0002a0002c0004a0002c0008others(1): Show | a0002c0002t0002a0002c0002t0005a0002c0002t0018others(3): Show | a0002c0002t0002g0023 a0002c0002t0002g0026 a0002c0002t0002g0033 others(37): Show |
49 | 354 | 0.1384 | 4 | c.*23 others(15): Show |
ATG16L1 | ENSG00000085978.22 | transcript | ENST00000392017.9 | protein_coding | 1001 | chr2 | TogoVar | |||||||
ATG16L2_chr11_72809411_72834635 | 72829587 | C | CTCTA | 3_prime_UTR_variant | MODIFIER | HG00099.hp2 HG00140.hp1 HG00140.hp2 others(242): Show |
a0001a0002a0006others(3): Show | a0001c0001a0001c0004a0002c0002others(4): Show | a0001c0001t0001a0001c0001t0004a0001c0001t0005others(7): Show | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(75): Show |
245 | 440 | 0.5568 | 4 | c.*20 others(13): Show |
ATG16L2 | ENSG00000168010.11 | transcript | ENST00000321297.10 | protein_coding | 18/18 | 205 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | |||||
ATG16L2_chr11_72809411_72834635 | 72830788 | T | TATTC | downstream_gene_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(435): Show |
a0001a0002a0003others(7): Show | a0001c0001a0001c0004a0002c0002others(8): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(14): Show | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(143): Show |
438 | 440 | 0.9955 | 4 | c.*13 others(15): Show |
ATG16L2 | ENSG00000168010.11 | transcript | ENST00000321297.10 | protein_coding | 1154 | chr11 | TogoVar | |||||||
ATG2A_chr11_64889546_64922209 | 64920943 | C | CTATA | upstream_gene_variant | MODIFIER | HG00140.hp1 HG00323.hp2 HG00438.hp1 others(122): Show |
a0001a0002a0006others(12): Show | a0001c0002a0001c0004a0001c0017others(18): Show | a0001c0002t0001a0001c0004t0002a0001c0017t0001others(18): Show | a0001c0002t0001g0001 a0001c0002t0001g0004 a0001c0002t0001g0006 others(74): Show |
125 | 372 | 0.3360 | 4 | c.-38 others(15): Show |
ATG2A | ENSG00000110046.14 | transcript | ENST00000377264.8 | protein_coding | 3735 | chr11 | TogoVar | |||||||
ATG2B_chr14_96274195_96368341 | 96279404 | C | CTCAT | 3_prime_UTR_variant | MODIFIER | HG01255.hp2 HG02109.hp1 HG02257.hp2 others(17): Show |
a0001a0005a0008 | a0001c0002a0001c0003a0005c0008others(2): Show | a0001c0002t0026a0001c0003t0023a0001c0003t0035others(7): Show | a0001c0002t0026g0010 a0001c0003t0023g0243 a0001c0003t0023g0245 others(15): Show |
20 | 356 | 0.0562 | 4 | c.*63 others(15): Show |
ATG2B | ENSG00000066739.12 | transcript | ENST00000359933.6 | protein_coding | 42/42 | 6350 | chr14 | TogoVar | ||||||
ATG2B_chr14_96274195_96368341 | 96287253 | C | CAAAA | intron_variant | MODIFIER | HG00438.hp1 HG00597.hp1 HG00609.hp2 others(35): Show |
a0002a0003a0006others(3): Show | a0002c0001a0003c0004a0006c0007others(3): Show | a0002c0001t0002a0002c0001t0003a0002c0001t0004others(14): Show | a0002c0001t0002g0110 a0002c0001t0002g0120 a0002c0001t0002g0126 others(35): Show |
38 | 356 | 0.1067 | 4 | c.600 others(23): Show |
ATG2B | ENSG00000066739.12 | transcript | ENST00000359933.6 | protein_coding | 41/41 | chr14 | TogoVar | |||||||
ATG2B_chr14_96274195_96368341 | 96295727 | C | CCACA | intron_variant | MODIFIER | HG02922.hp1 HG03139.hp1 HG03516.hp2 |
a0001 | a0001c0003 | a0001c0003t0023a0001c0003t0044a0001c0003t0046 | a0001c0003t0023g0243 a0001c0003t0044g0242 a0001c0003t0046g0244 |
3 | 356 | 0.0084 | 4 | c.514 others(21): Show |
ATG2B | ENSG00000066739.12 | transcript | ENST00000359933.6 | protein_coding | 34/41 | chr14 | TogoVar | |||||||
ATG2B_chr14_96274195_96368341 | 96298919 | A | ATGTT | intron_variant | MODIFIER | HG00140.hp1 HG00323.hp1 HG00609.hp1 others(39): Show |
a0001a0009a0014others(2): Show | a0001c0002a0001c0005a0001c0027others(4): Show | a0001c0002t0001a0001c0002t0026a0001c0002t0053others(9): Show | a0001c0002t0001g0011 a0001c0002t0001g0258 a0001c0002t0001g0260 others(37): Show |
42 | 356 | 0.1180 | 4 | c.513 others(23): Show |
ATG2B | ENSG00000066739.12 | transcript | ENST00000359933.6 | protein_coding | 34/41 | chr14 | TogoVar | |||||||
ATG2B_chr14_96274195_96368341 | 96360933 | C | CAAAA | intron_variant | MODIFIER | HG00642.hp1 HG01123.hp1 HG01175.hp2 others(17): Show |
a0001a0002a0004others(1): Show | a0001c0003a0001c0011a0002c0001others(4): Show | a0001c0003t0003a0001c0003t0005a0001c0003t0031others(9): Show | a0001c0003t0003g0239 a0001c0003t0005g0238 a0001c0003t0031g0240 others(17): Show |
20 | 356 | 0.0562 | 4 | c.162 others(21): Show |
ATG2B | ENSG00000066739.12 | transcript | ENST00000359933.6 | protein_coding | 1/41 | chr14 | TogoVar | |||||||
ATG3_chr3_112527510_112566962 | 112542127 | G | GCTAA | intron_variant | MODIFIER | HG00280.hp1 HG00408.hp1 HG00621.hp1 others(113): Show |
a0001a0004 | a0001c0001a0001c0002a0004c0003 | a0001c0001t0001a0001c0002t0001a0004c0003t0001 | a0001c0001t0001g0007 a0001c0001t0001g0010 a0001c0001t0001g0028 others(54): Show |
116 | 376 | 0.3085 | 4 | c.394 others(19): Show |
ATG3 | ENSG00000144848.11 | transcript | ENST00000283290.10 | protein_coding | 6/11 | chr3 | TogoVar | |||||||
ATG4A_chrX_108086778_108159671 | 108115118 | C | CGTGT | intron_variant | MODIFIER | HG02132.hp1 HG03195.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0059 a0001c0001t0001g0215 |
2 | 249 | 0.0080 | 4 | c.11- others(21): Show |
ATG4A | ENSG00000101844.18 | transcript | ENST00000372232.8 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||||
ATG4A_chrX_108086778_108159671 | 108141031 | C | CGTAT | intron_variant | MODIFIER | HG00558.hp1 HG01081.hp2 HG01361.hp2 others(19): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0168 a0001c0001t0002g0017 a0001c0001t0002g0018 others(17): Show |
22 | 249 | 0.0884 | 4 | c.814 others(21): Show |
ATG4A | ENSG00000101844.18 | transcript | ENST00000372232.8 | protein_coding | 9/12 | chrX | TogoVar | |||||||
ATG4A_chrX_108086778_108159671 | 108141058 | G | GTATA | intron_variant | MODIFIER | HG03669.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0196 | 1 | 249 | 0.0040 | 4 | c.814 others(21): Show |
ATG4A | ENSG00000101844.18 | transcript | ENST00000372232.8 | protein_coding | 9/12 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||||
ATG4A_chrX_108086778_108159671 | 108141063 | T | TATAC | intron_variant | MODIFIER | HG01975.hp2 HG01978.hp1 NA19090.hp1 |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0018 a0001c0001t0002g0175 |
3 | 249 | 0.0121 | 4 | c.814 others(21): Show |
ATG4A | ENSG00000101844.18 | transcript | ENST00000372232.8 | protein_coding | 9/12 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||||
ATG4A_chrX_108086778_108159671 | 108141071 | C | CATAT | intron_variant | MODIFIER | HG00099.hp1 HG00741.hp2 HG02258.hp1 others(11): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(1): Show | a0001c0001t0001g0033 a0001c0001t0001g0049 a0001c0001t0001g0067 others(11): Show |
14 | 249 | 0.0562 | 4 | c.814 others(21): Show |
ATG4A | ENSG00000101844.18 | transcript | ENST00000372232.8 | protein_coding | 9/12 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||||
ATG4A_chrX_108086778_108159671 | 108141071 | C | CGTAT | intron_variant | MODIFIER | HG01975.hp2 HG01978.hp1 |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0018 | 2 | 249 | 0.0080 | 4 | c.814 others(21): Show |
ATG4A | ENSG00000101844.18 | transcript | ENST00000372232.8 | protein_coding | 9/12 | chrX | TogoVar |