Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
ATRX_chrX_77499880_77791216	77659482	T T	TACAC TACAC	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG01496.hp2 HG01943.hp1 others(1): Show HG01081.hp2 HG01496.hp2 HG01943.hp1 HG02486.hp1	a0001 a0001	a0001c0001 a0001c0014 a0001c0001 a0001c0014	a0001c0001t0002 a0001c0001t0009 a0001c0001t0019 others(1): Show a0001c0001t0002 a0001c0001t0009 a0001c0001t0019 a0001c0014t0012	a0001c0001t0002g0170 a0001c0001t0009g0002 a0001c0001t0019g0134 others(1): Show a0001c0001t0002g0170 a0001c0001t0009g0002 a0001c0001t0019g0134 a0001c0014t0012g0003	4	218	0.0184	4	c.412 others(23): Show c.4121-2833_4121-2830dupGTGT	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	12/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77666024	C C	CAGAT CAGAT	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00280.hp1 HG00323.hp1 others(214): Show HG00140.hp1 HG00280.hp1 HG00323.hp1 HG00323.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00621.hp1 HG00642.hp1 HG00673.hp1 HG00738.hp1 HG01069.hp1 HG01070.hp1 HG01070.hp2 HG01074.hp1 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01109.hp1 HG01167.hp1 HG01192.hp1 HG01243.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG01358.hp1 HG01433.hp1 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01928.hp1 HG01934.hp1 HG01943.hp1 HG01952.hp1 HG01975.hp1 HG01975.hp2 HG02015.hp1 HG02027.hp1 HG02040.hp1 HG02055.hp1 HG02056.hp1 HG02071.hp1 HG02074.hp1 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02129.hp1 HG02132.hp1 HG02135.hp1 HG02145.hp1 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02602.hp1 HG02615.hp1 HG02615.hp2 HG02647.hp1 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp1 HG02809.hp2 HG02895.hp1 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG03017.hp1 HG03098.hp1 HG03130.hp1 HG03139.hp1 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp1 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03492.hp1 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03654.hp1 HG03688.hp1 HG03710.hp1 HG03831.hp1 HG03831.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG04115.hp1 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04204.hp1 HG04228.hp1 NA18522.hp1 NA18612.hp1 NA18747.hp1 NA18906.hp1 NA18906.hp2 NA18943.hp1 NA18944.hp1 NA18945.hp1 NA18947.hp1 NA18947.hp2 NA18948.hp1 NA18952.hp1 NA18953.hp1 NA18955.hp1 NA18959.hp1 NA18960.hp1 NA18961.hp1 NA18962.hp1 NA18964.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18967.hp1 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18971.hp1 NA18973.hp1 NA18973.hp2 NA18977.hp1 NA18982.hp1 NA18983.hp1 NA18984.hp1 NA18985.hp1 NA18986.hp1 NA18988.hp1 NA18989.hp1 NA18990.hp1 NA18992.hp1 NA18992.hp2 NA18994.hp1 NA18995.hp1 NA19000.hp1 NA19001.hp1 NA19001.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19005.hp1 NA19007.hp1 NA19009.hp1 NA19011.hp1 NA19011.hp2 NA19012.hp1 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19055.hp1 NA19056.hp1 NA19058.hp1 NA19060.hp1 NA19063.hp1 NA19066.hp1 NA19068.hp1 NA19070.hp1 NA19074.hp1 NA19074.hp2 NA19079.hp1 NA19080.hp1 NA19080.hp2 NA19082.hp1 NA19083.hp1 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19086.hp1 NA19088.hp1 NA19091.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20752.hp1 NA20805.hp1 NA20905.hp1 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0004 a0005 a0006	a0001c0001 a0001c0003 a0001c0005 others(11): Show a0001c0001 a0001c0003 a0001c0005 a0001c0007 a0001c0010 a0001c0012 a0001c0013 a0001c0014 a0002c0002 a0002c0004 a0003c0006 a0004c0011 a0005c0009 a0006c0008	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(35): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 a0001c0001t0014 a0001c0001t0017 a0001c0001t0018 a0001c0001t0019 a0001c0001t0020 a0001c0001t0021 a0001c0003t0001 a0001c0003t0003 a0001c0005t0005 a0001c0007t0005 a0001c0010t0006 a0001c0012t0001 a0001c0013t0002 a0001c0014t0012 a0002c0002t0001 a0002c0002t0002 a0002c0002t0003 a0002c0002t0006 a0002c0002t0013 a0002c0002t0015 a0002c0002t0016 a0002c0004t0001 a0002c0004t0003 a0003c0006t0001 a0004c0011t0002 a0005c0009t0010 a0006c0008t0003	a0001c0001t0001g0087 a0001c0001t0001g0096 a0001c0001t0001g0102 others(214): Show a0001c0001t0001g0087 a0001c0001t0001g0096 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0108 a0001c0001t0001g0116 a0001c0001t0001g0121 a0001c0001t0001g0132 a0001c0001t0001g0139 a0001c0001t0001g0149 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0001g0157 a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0195 a0001c0001t0001g0198 a0001c0001t0002g0071 a0001c0001t0002g0072 a0001c0001t0002g0089 a0001c0001t0002g0090 a0001c0001t0002g0091 a0001c0001t0002g0092 a0001c0001t0002g0098 a0001c0001t0002g0099 a0001c0001t0002g0100 a0001c0001t0002g0101 a0001c0001t0002g0105 a0001c0001t0002g0106 a0001c0001t0002g0107 a0001c0001t0002g0118 a0001c0001t0002g0119 a0001c0001t0002g0120 a0001c0001t0002g0123 a0001c0001t0002g0124 a0001c0001t0002g0125 a0001c0001t0002g0126 a0001c0001t0002g0127 a0001c0001t0002g0128 a0001c0001t0002g0129 a0001c0001t0002g0130 a0001c0001t0002g0131 a0001c0001t0002g0133 a0001c0001t0002g0142 a0001c0001t0002g0143 a0001c0001t0002g0144 a0001c0001t0002g0145 a0001c0001t0002g0146 a0001c0001t0002g0147 a0001c0001t0002g0148 a0001c0001t0002g0156 a0001c0001t0002g0158 a0001c0001t0002g0166 a0001c0001t0002g0168 a0001c0001t0002g0169 a0001c0001t0002g0170 a0001c0001t0002g0172 a0001c0001t0002g0173 a0001c0001t0002g0174 a0001c0001t0002g0175 a0001c0001t0002g0178 a0001c0001t0002g0181 a0001c0001t0002g0182 a0001c0001t0002g0184 a0001c0001t0002g0189 a0001c0001t0002g0199 a0001c0001t0002g0211 a0001c0001t0002g0215 a0001c0001t0002g0216 a0001c0001t0003g0084 a0001c0001t0003g0085 a0001c0001t0003g0088 a0001c0001t0003g0112 a0001c0001t0003g0115 a0001c0001t0003g0137 a0001c0001t0003g0138 a0001c0001t0003g0162 a0001c0001t0003g0163 a0001c0001t0003g0164 a0001c0001t0003g0196 a0001c0001t0003g0200 a0001c0001t0003g0201 a0001c0001t0003g0202 a0001c0001t0004g0122 a0001c0001t0004g0185 a0001c0001t0004g0186 a0001c0001t0004g0187 a0001c0001t0004g0188 a0001c0001t0004g0190 a0001c0001t0004g0191 a0001c0001t0004g0192 a0001c0001t0004g0194 a0001c0001t0004g0205 a0001c0001t0004g0218 a0001c0001t0005g0069 a0001c0001t0005g0073 a0001c0001t0005g0074 a0001c0001t0005g0075 a0001c0001t0005g0135 a0001c0001t0005g0213 a0001c0001t0006g0165 a0001c0001t0006g0179 a0001c0001t0006g0214 a0001c0001t0007g0066 a0001c0001t0007g0067 a0001c0001t0007g0068 a0001c0001t0007g0070 a0001c0001t0008g0005 a0001c0001t0008g0006 a0001c0001t0008g0077 a0001c0001t0009g0002 a0001c0001t0009g0004 a0001c0001t0010g0083 a0001c0001t0011g0001 a0001c0001t0014g0150 a0001c0001t0017g0183 a0001c0001t0018g0193 a0001c0001t0019g0134 a0001c0001t0020g0180 a0001c0001t0021g0078 a0001c0003t0001g0080 a0001c0003t0001g0094 a0001c0003t0001g0095 a0001c0003t0001g0136 a0001c0003t0001g0151 a0001c0003t0001g0152 a0001c0003t0001g0155 a0001c0003t0001g0167 a0001c0003t0001g0176 a0001c0003t0001g0217 a0001c0003t0003g0171 a0001c0005t0005g0076 a0001c0005t0005g0081 a0001c0005t0005g0082 a0001c0007t0005g0079 a0001c0010t0006g0197 a0001c0012t0001g0111 a0001c0013t0002g0212 a0001c0014t0012g0003 a0002c0002t0001g0010 a0002c0002t0001g0011 a0002c0002t0001g0013 a0002c0002t0001g0014 a0002c0002t0001g0016 a0002c0002t0001g0017 a0002c0002t0001g0018 a0002c0002t0001g0022 a0002c0002t0001g0024 a0002c0002t0001g0026 a0002c0002t0001g0028 a0002c0002t0001g0029 a0002c0002t0001g0033 a0002c0002t0001g0034 a0002c0002t0001g0035 a0002c0002t0001g0036 a0002c0002t0001g0038 a0002c0002t0001g0039 a0002c0002t0001g0040 a0002c0002t0001g0041 a0002c0002t0001g0042 a0002c0002t0001g0044 a0002c0002t0001g0045 a0002c0002t0001g0049 a0002c0002t0001g0050 a0002c0002t0001g0054 a0002c0002t0001g0058 a0002c0002t0001g0059 a0002c0002t0001g0060 a0002c0002t0001g0061 a0002c0002t0001g0062 a0002c0002t0001g0063 a0002c0002t0001g0097 a0002c0002t0001g0109 a0002c0002t0001g0114 a0002c0002t0001g0117 a0002c0002t0001g0140 a0002c0002t0001g0141 a0002c0002t0001g0204 a0002c0002t0001g0209 a0002c0002t0002g0007 a0002c0002t0002g0012 a0002c0002t0002g0020 a0002c0002t0002g0032 a0002c0002t0002g0037 a0002c0002t0002g0047 a0002c0002t0002g0048 a0002c0002t0002g0051 a0002c0002t0002g0052 a0002c0002t0002g0053 a0002c0002t0002g0057 a0002c0002t0002g0064 a0002c0002t0002g0065 a0002c0002t0002g0110 a0002c0002t0002g0206 a0002c0002t0002g0208 a0002c0002t0002g0210 a0002c0002t0003g0019 a0002c0002t0003g0021 a0002c0002t0003g0025 a0002c0002t0003g0027 a0002c0002t0003g0177 a0002c0002t0006g0056 a0002c0002t0006g0207 a0002c0002t0013g0008 a0002c0002t0015g0043 a0002c0002t0016g0046 a0002c0004t0001g0009 a0002c0004t0001g0023 a0002c0004t0001g0031 a0002c0004t0001g0055 a0002c0004t0003g0030 a0003c0006t0001g0015 a0003c0006t0001g0159 a0004c0011t0002g0093 a0005c0009t0010g0086 a0006c0008t0003g0203	217	218	0.9954	4	c.381 others(23): Show c.3810-1250_3810-1247dupATCT	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	10/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77667295	A A	ATGTG ATGTG	intron_variant intron_variant	MODIFIER	HG00621.hp1 HG01074.hp1 HG01243.hp1 others(23): Show HG00621.hp1 HG01074.hp1 HG01243.hp1 HG01255.hp1 HG01515.hp1 HG01516.hp1 HG01517.hp1 HG02040.hp1 HG02129.hp1 HG02486.hp1 HG03927.hp1 HG04184.hp1 NA18612.hp1 NA18747.hp1 NA18947.hp1 NA18964.hp1 NA18969.hp2 NA18973.hp2 NA18983.hp1 NA18989.hp1 NA19009.hp1 NA19063.hp1 NA19068.hp1 NA19082.hp1 NA19084.hp1 NA19085.hp1	a0001 a0001	a0001c0001 a0001c0012 a0001c0001 a0001c0012	a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 a0001c0001t0008 a0001c0012t0001	a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0121 others(23): Show a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0121 a0001c0001t0001g0139 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0001g0157 a0001c0001t0002g0098 a0001c0001t0002g0099 a0001c0001t0002g0107 a0001c0001t0002g0118 a0001c0001t0002g0128 a0001c0001t0002g0130 a0001c0001t0002g0131 a0001c0001t0002g0143 a0001c0001t0002g0144 a0001c0001t0002g0145 a0001c0001t0002g0146 a0001c0001t0002g0147 a0001c0001t0002g0156 a0001c0001t0002g0168 a0001c0001t0002g0170 a0001c0001t0002g0211 a0001c0001t0006g0165 a0001c0001t0008g0077 a0001c0012t0001g0111	26	218	0.1193	4	c.381 others(23): Show c.3810-2521_3810-2518dupCACA	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	10/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77671147	C C	CAAAA CAAAA	intron_variant intron_variant	MODIFIER	HG02922.hp1 HG02922.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0201 a0001c0001t0003g0201	1	218	0.0046	4	c.380 others(23): Show c.3809+5075_3809+5078dupTTTT	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	10/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77671167	A A	AAAAT AAAAT	intron_variant intron_variant	MODIFIER	HG02723.hp1 HG02723.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0074 a0001c0001t0005g0074	1	218	0.0046	4	c.380 others(23): Show c.3809+5058_3809+5059insATTT	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	10/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77671167	A A	AATAT AATAT	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02572.hp1 HG02647.hp1 others(1): Show HG02055.hp1 HG02572.hp1 HG02647.hp1 HG02809.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0005 a0001c0001t0002 a0001c0001t0005	a0001c0001t0002g0158 a0001c0001t0005g0073 a0001c0001t0005g0075 others(1): Show a0001c0001t0002g0158 a0001c0001t0005g0073 a0001c0001t0005g0075 a0001c0001t0005g0213	4	218	0.0184	4	c.380 others(23): Show c.3809+5055_3809+5058dupATAT	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	10/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77692846	A A	AGTGT AGTGT	intron_variant intron_variant	MODIFIER	HG00621.hp1 HG01070.hp1 HG01070.hp2 others(29): Show HG00621.hp1 HG01070.hp1 HG01070.hp2 HG01074.hp1 HG01081.hp1 HG01433.hp1 HG01496.hp2 HG01515.hp1 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01943.hp1 HG02040.hp1 HG02080.hp1 HG02080.hp2 HG02145.hp1 HG02165.hp2 HG02258.hp1 HG02273.hp1 HG02615.hp2 HG03831.hp1 HG04115.hp1 NA18960.hp1 NA18967.hp1 NA18992.hp1 NA18994.hp1 NA19000.hp1 NA19001.hp2 NA19003.hp2 NA19007.hp1 NA19043.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0005 a0001c0014 others(1): Show a0001c0001 a0001c0005 a0001c0014 a0002c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(8): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0009 a0001c0005t0005 a0001c0014t0012 a0002c0002t0001 a0002c0002t0002 a0002c0002t0006 a0002c0002t0013 a0002c0002t0016	a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0108 others(29): Show a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0108 a0001c0001t0001g0139 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0001g0198 a0001c0001t0002g0072 a0001c0001t0002g0119 a0001c0001t0002g0120 a0001c0001t0002g0129 a0001c0001t0002g0142 a0001c0001t0002g0144 a0001c0001t0002g0168 a0001c0001t0002g0174 a0001c0001t0002g0184 a0001c0001t0002g0216 a0001c0001t0003g0202 a0001c0001t0009g0002 a0001c0001t0009g0004 a0001c0005t0005g0081 a0001c0014t0012g0003 a0002c0002t0001g0033 a0002c0002t0001g0045 a0002c0002t0001g0097 a0002c0002t0002g0032 a0002c0002t0002g0047 a0002c0002t0002g0051 a0002c0002t0002g0208 a0002c0002t0006g0207 a0002c0002t0013g0008 a0002c0002t0016g0046	32	218	0.1468	4	c.484 others(19): Show c.484+974_484+977dupACAC	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	6/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77706630	G G	GCAGT GCAGT	intron_variant intron_variant	MODIFIER	HG02056.hp1 HG02056.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0181 a0001c0001t0002g0181	1	218	0.0046	4	c.134 others(21): Show c.134-8005_134-8002dupACTG	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	2/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77710933	A A	AACAC AACAC	intron_variant intron_variant	MODIFIER	NA18947.hp2 NA18961.hp1 NA18977.hp1 others(4): Show NA18947.hp2 NA18961.hp1 NA18977.hp1 NA19003.hp1 NA19011.hp1 NA19056.hp1 NA19083.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0003 a0002c0002t0001 a0002c0002t0003	a0002c0002t0001g0017 a0002c0002t0001g0029 a0002c0002t0001g0038 others(4): Show a0002c0002t0001g0017 a0002c0002t0001g0029 a0002c0002t0001g0038 a0002c0002t0001g0059 a0002c0002t0001g0061 a0002c0002t0001g0209 a0002c0002t0003g0019	7	218	0.0321	4	c.133 others(21): Show c.133+6194_133+6197dupGTGT	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	2/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77716109	A A	ATTTT ATTTT	intron_variant intron_variant	MODIFIER	HG01433.hp1 HG01433.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0104 a0001c0001t0001g0104	1	218	0.0046	4	c.133 others(21): Show c.133+1021_133+1022insAAAA	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	2/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77716110	A A	ATTTT ATTTT	intron_variant intron_variant	MODIFIER	HG00609.hp1 HG01081.hp2 HG01257.hp2 others(16): Show HG00609.hp1 HG01081.hp2 HG01257.hp2 HG02056.hp1 HG02080.hp2 HG02559.hp1 HG02698.hp1 HG02922.hp2 HG03098.hp1 HG03130.hp1 HG03139.hp1 HG03486.hp2 HG04204.hp1 NA18906.hp1 NA18943.hp1 NA19001.hp2 NA19009.hp1 NA19030.hp1 NA19084.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0014 a0001c0001t0019 a0001c0003t0001 a0001c0003t0003	a0001c0001t0001g0096 a0001c0001t0001g0132 a0001c0001t0001g0160 others(16): Show a0001c0001t0001g0096 a0001c0001t0001g0132 a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0002g0099 a0001c0001t0002g0105 a0001c0001t0002g0129 a0001c0001t0002g0147 a0001c0001t0002g0181 a0001c0001t0002g0184 a0001c0001t0004g0218 a0001c0001t0014g0150 a0001c0001t0019g0134 a0001c0003t0001g0094 a0001c0003t0001g0136 a0001c0003t0001g0155 a0001c0003t0001g0167 a0001c0003t0001g0176 a0001c0003t0003g0171	19	218	0.0872	4	c.133 others(21): Show c.133+1017_133+1020dupAAAA	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	2/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77716319	A A	AATAT AATAT	intron_variant intron_variant	MODIFIER	HG01358.hp1 HG01952.hp1 NA18986.hp1 HG01358.hp1 HG01952.hp1 NA18986.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0002 a0002c0002t0001 a0002c0002t0002	a0002c0002t0001g0049 a0002c0002t0002g0053 a0002c0002t0002g0064 a0002c0002t0001g0049 a0002c0002t0002g0053 a0002c0002t0002g0064	3	218	0.0138	4	c.133 others(19): Show c.133+811_133+812insATAT	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	2/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77716321	A A	AATAT AATAT	intron_variant intron_variant	MODIFIER	HG02717.hp1 HG02717.hp1	a0001 a0001	a0001c0010 a0001c0010	a0001c0010t0006 a0001c0010t0006	a0001c0010t0006g0197 a0001c0010t0006g0197	1	218	0.0046	4	c.133 others(19): Show c.133+809_133+810insATAT	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	2/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77716323	A A	AATAT AATAT	intron_variant intron_variant	MODIFIER	HG02809.hp1 HG02809.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0158 a0001c0001t0002g0158	1	218	0.0046	4	c.133 others(19): Show c.133+804_133+807dupATAT	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	2/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77734208	A A	AATAC AATAC	intron_variant intron_variant	MODIFIER	HG00609.hp1 HG00621.hp1 HG01070.hp1 others(28): Show HG00609.hp1 HG00621.hp1 HG01070.hp1 HG01257.hp2 HG01258.hp1 HG01496.hp2 HG01943.hp1 HG02040.hp1 HG02056.hp1 HG02129.hp1 HG02135.hp1 HG02165.hp2 HG02280.hp2 HG02615.hp1 HG02683.hp1 HG02698.hp1 HG03130.hp1 HG03239.hp1 HG03710.hp1 NA18943.hp1 NA18960.hp1 NA18964.hp2 NA18965.hp1 NA18969.hp2 NA18973.hp2 NA18989.hp1 NA19003.hp2 NA19055.hp1 NA19056.hp1 NA19082.hp1 NA21309.hp1	a0001 a0002 a0006 a0001 a0002 a0006	a0001c0001 a0001c0003 a0001c0013 others(3): Show a0001c0001 a0001c0003 a0001c0013 a0001c0014 a0002c0002 a0006c0008	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(9): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0006 a0001c0001t0009 a0001c0001t0014 a0001c0003t0003 a0001c0013t0002 a0001c0014t0012 a0002c0002t0001 a0006c0008t0003	a0001c0001t0001g0096 a0001c0001t0001g0108 a0001c0001t0001g0132 others(28): Show a0001c0001t0001g0096 a0001c0001t0001g0108 a0001c0001t0001g0132 a0001c0001t0001g0157 a0001c0001t0002g0072 a0001c0001t0002g0105 a0001c0001t0002g0106 a0001c0001t0002g0118 a0001c0001t0002g0119 a0001c0001t0002g0120 a0001c0001t0002g0123 a0001c0001t0002g0130 a0001c0001t0002g0133 a0001c0001t0002g0144 a0001c0001t0002g0145 a0001c0001t0002g0168 a0001c0001t0002g0172 a0001c0001t0002g0175 a0001c0001t0002g0181 a0001c0001t0002g0211 a0001c0001t0003g0162 a0001c0001t0004g0205 a0001c0001t0006g0179 a0001c0001t0009g0002 a0001c0001t0014g0150 a0001c0003t0003g0171 a0001c0013t0002g0212 a0001c0014t0012g0003 a0002c0002t0001g0044 a0002c0002t0001g0061 a0006c0008t0003g0203	31	218	0.1422	4	c.21- others(21): Show c.21-16969_21-16966dupGTAT	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	1/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77735598	C C	CTAAA CTAAA	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00323.hp1 HG00597.hp2 others(26): Show HG00140.hp1 HG00323.hp1 HG00597.hp2 HG01106.hp1 HG01192.hp1 HG01358.hp1 HG01952.hp1 HG02258.hp1 HG02280.hp2 HG02559.hp2 HG02735.hp1 HG02922.hp1 HG03195.hp2 HG03486.hp1 HG03490.hp1 HG03492.hp1 HG03942.hp1 NA18961.hp1 NA18992.hp1 NA18995.hp1 NA19001.hp1 NA19003.hp1 NA19030.hp2 NA19058.hp1 NA19060.hp1 NA19070.hp1 NA19091.hp1 NA20805.hp1 NA21309.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0006	a0001c0001 a0002c0002 a0003c0006 others(1): Show a0001c0001 a0002c0002 a0003c0006 a0006c0008	a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 others(7): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0007 a0002c0002t0001 a0002c0002t0002 a0002c0002t0003 a0002c0002t0006 a0003c0006t0001 a0006c0008t0003	a0001c0001t0002g0182 a0001c0001t0002g0199 a0001c0001t0003g0200 others(26): Show a0001c0001t0002g0182 a0001c0001t0002g0199 a0001c0001t0003g0200 a0001c0001t0003g0201 a0001c0001t0003g0202 a0001c0001t0005g0069 a0001c0001t0007g0066 a0002c0002t0001g0014 a0002c0002t0001g0024 a0002c0002t0001g0026 a0002c0002t0001g0029 a0002c0002t0001g0034 a0002c0002t0001g0038 a0002c0002t0001g0039 a0002c0002t0001g0040 a0002c0002t0001g0054 a0002c0002t0001g0114 a0002c0002t0001g0140 a0002c0002t0002g0007 a0002c0002t0002g0032 a0002c0002t0002g0053 a0002c0002t0002g0057 a0002c0002t0002g0064 a0002c0002t0003g0021 a0002c0002t0003g0027 a0002c0002t0003g0177 a0002c0002t0006g0056 a0003c0006t0001g0015 a0006c0008t0003g0203	29	218	0.1330	4	c.21- others(21): Show c.21-18359_21-18356dupTTTA	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	1/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77735808	C C	CTAAA CTAAA	intron_variant intron_variant	MODIFIER	HG02027.hp1 HG02970.hp2 NA19240.hp1 HG02027.hp1 HG02970.hp2 NA19240.hp1	a0001 a0002 a0001 a0002	a0001c0003 a0001c0005 a0002c0002 a0001c0003 a0001c0005 a0002c0002	a0001c0003t0001 a0001c0005t0005 a0002c0002t0002 a0001c0003t0001 a0001c0005t0005 a0002c0002t0002	a0001c0003t0001g0080 a0001c0005t0005g0076 a0002c0002t0002g0052 a0001c0003t0001g0080 a0001c0005t0005g0076 a0002c0002t0002g0052	3	218	0.0138	4	c.21- others(21): Show c.21-18569_21-18566dupTTTA	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	1/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77737434	A A	AGGGG AGGGG	intron_variant intron_variant	MODIFIER	HG02165.hp1 HG02165.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0192 a0001c0001t0004g0192	1	218	0.0046	4	c.21- others(21): Show c.21-20192_21-20191insCCCC	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	1/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77737435	A A	AGGGG AGGGG	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG02602.hp1 HG02615.hp1 others(9): Show HG01109.hp1 HG02602.hp1 HG02615.hp1 HG02615.hp2 HG02809.hp1 HG03225.hp1 HG03579.hp1 HG04204.hp1 NA18948.hp1 NA19007.hp1 NA19080.hp1 NA21309.hp1	a0001 a0005 a0001 a0005	a0001c0001 a0001c0005 a0001c0007 others(1): Show a0001c0001 a0001c0005 a0001c0007 a0005c0009	a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 others(4): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0006 a0001c0005t0005 a0001c0007t0005 a0005c0009t0010	a0001c0001t0002g0142 a0001c0001t0002g0158 a0001c0001t0002g0189 others(9): Show a0001c0001t0002g0142 a0001c0001t0002g0158 a0001c0001t0002g0189 a0001c0001t0003g0084 a0001c0001t0003g0162 a0001c0001t0003g0164 a0001c0001t0004g0191 a0001c0001t0004g0218 a0001c0001t0006g0179 a0001c0005t0005g0081 a0001c0007t0005g0079 a0005c0009t0010g0086	12	218	0.0551	4	c.21- others(21): Show c.21-20196_21-20193dupCCCC	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	1/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77738558	C C	CTTTT CTTTT	intron_variant intron_variant	MODIFIER	HG02451.hp1 NA20129.hp2 HG02451.hp1 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0005 a0001c0001t0008g0006 a0001c0001t0008g0005 a0001c0001t0008g0006	2	218	0.0092	4	c.21- others(21): Show c.21-21319_21-21316dupAAAA	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	1/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77740077	A A	AAAAT AAAAT	intron_variant intron_variant	MODIFIER	HG01934.hp1 HG01934.hp1	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0001 a0002c0004t0001	a0002c0004t0001g0055 a0002c0004t0001g0055	1	218	0.0046	4	c.21- others(21): Show c.21-22835_21-22834insATTT	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	1/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77741037	T T	TACAC TACAC	intron_variant intron_variant	MODIFIER	NA20752.hp1 NA20752.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0048 a0002c0002t0002g0048	1	218	0.0046	4	c.21- others(21): Show c.21-23798_21-23795dupGTGT	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	1/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77755415	T T	TTTCG TTTCG	intron_variant intron_variant	MODIFIER	NA18992.hp1 NA18992.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0032 a0002c0002t0002g0032	1	218	0.0046	4	c.20+ others(21): Show c.20+30566_20+30567insCGAA	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	1/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77774882	T T	TTTTG TTTTG	intron_variant intron_variant	MODIFIER	HG02280.hp1 HG02615.hp1 NA18947.hp1 others(3): Show HG02280.hp1 HG02615.hp1 NA18947.hp1 NA18947.hp2 NA18977.hp1 NA19082.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0002 a0001c0001t0006 a0001c0001t0010 others(1): Show a0001c0001t0002 a0001c0001t0006 a0001c0001t0010 a0002c0002t0001	a0001c0001t0002g0156 a0001c0001t0002g0211 a0001c0001t0006g0179 others(3): Show a0001c0001t0002g0156 a0001c0001t0002g0211 a0001c0001t0006g0179 a0001c0001t0010g0083 a0002c0002t0001g0059 a0002c0002t0001g0209	6	218	0.0275	4	c.20+ others(21): Show c.20+11096_20+11099dupCAAA	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	1/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77775715	C C	CTTTA CTTTA	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00280.hp1 HG00323.hp1 others(133): Show HG00140.hp1 HG00280.hp1 HG00323.hp1 HG00323.hp2 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00621.hp1 HG00642.hp1 HG00673.hp1 HG01069.hp1 HG01070.hp1 HG01070.hp2 HG01074.hp1 HG01081.hp1 HG01099.hp1 HG01106.hp1 HG01167.hp1 HG01192.hp1 HG01255.hp1 HG01256.hp1 HG01261.hp1 HG01358.hp1 HG01433.hp1 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01928.hp1 HG01934.hp1 HG01943.hp1 HG01952.hp1 HG01975.hp1 HG02027.hp1 HG02040.hp1 HG02056.hp1 HG02071.hp1 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02129.hp1 HG02132.hp1 HG02135.hp1 HG02145.hp1 HG02165.hp1 HG02165.hp2 HG02273.hp1 HG02451.hp2 HG02486.hp1 HG02615.hp2 HG02698.hp1 HG02735.hp1 HG02738.hp1 HG03195.hp1 HG03239.hp1 HG03490.hp1 HG03492.hp1 HG03654.hp1 HG03688.hp1 HG03710.hp1 HG03831.hp1 HG03831.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp1 HG04199.hp1 HG04228.hp1 NA18612.hp1 NA18747.hp1 NA18943.hp1 NA18944.hp1 NA18945.hp1 NA18947.hp2 NA18952.hp1 NA18953.hp1 NA18955.hp1 NA18959.hp1 NA18960.hp1 NA18961.hp1 NA18964.hp1 NA18964.hp2 NA18966.hp1 NA18967.hp1 NA18969.hp1 NA18969.hp2 NA18971.hp1 NA18973.hp2 NA18977.hp1 NA18982.hp1 NA18983.hp1 NA18984.hp1 NA18985.hp1 NA18986.hp1 NA18988.hp1 NA18989.hp1 NA18990.hp1 NA18992.hp1 NA18992.hp2 NA18994.hp1 NA18995.hp1 NA19000.hp1 NA19001.hp1 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19005.hp1 NA19009.hp1 NA19011.hp1 NA19011.hp2 NA19012.hp1 NA19055.hp1 NA19056.hp1 NA19058.hp1 NA19060.hp1 NA19063.hp1 NA19066.hp1 NA19068.hp1 NA19074.hp2 NA19079.hp1 NA19080.hp2 NA19083.hp1 NA19084.hp1 NA19085.hp1 NA19086.hp1 NA19088.hp1 NA19091.hp1 NA20129.hp1 NA20752.hp1 NA20805.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0001 a0001c0005 a0001c0012 others(5): Show a0001c0001 a0001c0005 a0001c0012 a0001c0014 a0002c0002 a0002c0004 a0003c0006 a0004c0011	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(18): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0006 a0001c0001t0009 a0001c0001t0014 a0001c0005t0005 a0001c0012t0001 a0001c0014t0012 a0002c0002t0001 a0002c0002t0002 a0002c0002t0003 a0002c0002t0006 a0002c0002t0013 a0002c0002t0015 a0002c0002t0016 a0002c0004t0001 a0002c0004t0003 a0003c0006t0001 a0004c0011t0002	a0001c0001t0001g0096 a0001c0001t0001g0102 a0001c0001t0001g0103 others(133): Show a0001c0001t0001g0096 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0108 a0001c0001t0001g0116 a0001c0001t0001g0121 a0001c0001t0001g0139 a0001c0001t0001g0149 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0001g0157 a0001c0001t0002g0071 a0001c0001t0002g0072 a0001c0001t0002g0089 a0001c0001t0002g0090 a0001c0001t0002g0091 a0001c0001t0002g0092 a0001c0001t0002g0098 a0001c0001t0002g0099 a0001c0001t0002g0100 a0001c0001t0002g0101 a0001c0001t0002g0105 a0001c0001t0002g0106 a0001c0001t0002g0107 a0001c0001t0002g0118 a0001c0001t0002g0119 a0001c0001t0002g0120 a0001c0001t0002g0123 a0001c0001t0002g0124 a0001c0001t0002g0125 a0001c0001t0002g0126 a0001c0001t0002g0127 a0001c0001t0002g0128 a0001c0001t0002g0129 a0001c0001t0002g0130 a0001c0001t0002g0131 a0001c0001t0002g0143 a0001c0001t0002g0144 a0001c0001t0002g0145 a0001c0001t0002g0146 a0001c0001t0002g0147 a0001c0001t0002g0148 a0001c0001t0002g0166 a0001c0001t0002g0168 a0001c0001t0002g0169 a0001c0001t0002g0170 a0001c0001t0002g0172 a0001c0001t0002g0173 a0001c0001t0002g0174 a0001c0001t0002g0175 a0001c0001t0002g0181 a0001c0001t0002g0215 a0001c0001t0002g0216 a0001c0001t0003g0112 a0001c0001t0003g0115 a0001c0001t0003g0137 a0001c0001t0003g0138 a0001c0001t0004g0122 a0001c0001t0004g0192 a0001c0001t0006g0165 a0001c0001t0006g0214 a0001c0001t0009g0002 a0001c0001t0009g0004 a0001c0001t0014g0150 a0001c0005t0005g0081 a0001c0012t0001g0111 a0001c0014t0012g0003 a0002c0002t0001g0010 a0002c0002t0001g0011 a0002c0002t0001g0013 a0002c0002t0001g0014 a0002c0002t0001g0016 a0002c0002t0001g0017 a0002c0002t0001g0018 a0002c0002t0001g0022 a0002c0002t0001g0024 a0002c0002t0001g0026 a0002c0002t0001g0028 a0002c0002t0001g0029 a0002c0002t0001g0033 a0002c0002t0001g0034 a0002c0002t0001g0038 a0002c0002t0001g0039 a0002c0002t0001g0040 a0002c0002t0001g0041 a0002c0002t0001g0042 a0002c0002t0001g0044 a0002c0002t0001g0045 a0002c0002t0001g0049 a0002c0002t0001g0050 a0002c0002t0001g0054 a0002c0002t0001g0058 a0002c0002t0001g0059 a0002c0002t0001g0061 a0002c0002t0001g0062 a0002c0002t0001g0063 a0002c0002t0001g0097 a0002c0002t0001g0109 a0002c0002t0001g0117 a0002c0002t0001g0140 a0002c0002t0001g0204 a0002c0002t0001g0209 a0002c0002t0002g0007 a0002c0002t0002g0012 a0002c0002t0002g0020 a0002c0002t0002g0032 a0002c0002t0002g0037 a0002c0002t0002g0047 a0002c0002t0002g0048 a0002c0002t0002g0051 a0002c0002t0002g0052 a0002c0002t0002g0053 a0002c0002t0002g0057 a0002c0002t0002g0064 a0002c0002t0002g0065 a0002c0002t0002g0110 a0002c0002t0002g0206 a0002c0002t0002g0208 a0002c0002t0002g0210 a0002c0002t0003g0019 a0002c0002t0003g0021 a0002c0002t0003g0025 a0002c0002t0003g0027 a0002c0002t0006g0056 a0002c0002t0006g0207 a0002c0002t0013g0008 a0002c0002t0015g0043 a0002c0002t0016g0046 a0002c0004t0001g0009 a0002c0004t0001g0023 a0002c0004t0001g0031 a0002c0004t0001g0055 a0002c0004t0003g0030 a0003c0006t0001g0015 a0004c0011t0002g0093	136	218	0.6239	4	c.20+ others(21): Show c.20+10263_20+10266dupTAAA	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	1/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77777191	T T	TAAAA TAAAA	intron_variant intron_variant	MODIFIER	HG01074.hp1 HG01433.hp1 HG01515.hp1 others(9): Show HG01074.hp1 HG01433.hp1 HG01515.hp1 HG01517.hp1 HG02132.hp1 HG02602.hp1 HG02809.hp2 HG03239.hp2 HG03540.hp1 HG03579.hp1 HG04184.hp2 NA21309.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0005 a0002c0002 a0001c0001 a0001c0005 a0002c0002	a0001c0001t0001 a0001c0001t0003 a0001c0001t0011 others(3): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0011 a0001c0001t0020 a0001c0005t0005 a0002c0002t0015	a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0153 others(9): Show a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0003g0084 a0001c0001t0003g0162 a0001c0001t0003g0163 a0001c0001t0003g0164 a0001c0001t0011g0001 a0001c0001t0020g0180 a0001c0005t0005g0082 a0002c0002t0015g0043	12	218	0.0551	4	c.20+ others(19): Show c.20+8787_20+8790dupTTTT	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	1/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77786905	T T	TACAC TACAC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02698.hp1 NA18964.hp1 NA18992.hp2 others(1): Show HG02698.hp1 NA18964.hp1 NA18992.hp2 NA19079.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0096 a0001c0001t0001g0116 a0001c0001t0002g0143 others(1): Show a0001c0001t0001g0096 a0001c0001t0001g0116 a0001c0001t0002g0143 a0001c0001t0002g0169	4	218	0.0184	4	c.-90 others(13): Show c.-905_-904insGTGT	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding		690		chrX	TogoVar
ATRX_chrX_77499880_77791216	77790928	A A	ATGTG ATGTG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02615.hp2 HG02809.hp2 HG02970.hp2 others(2): Show HG02615.hp2 HG02809.hp2 HG02970.hp2 HG03209.hp1 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0007 a0001c0001t0008 a0001c0005t0005 a0001c0001t0007 a0001c0001t0008 a0001c0005t0005	a0001c0001t0007g0070 a0001c0001t0008g0005 a0001c0005t0005g0076 others(2): Show a0001c0001t0007g0070 a0001c0001t0008g0005 a0001c0005t0005g0076 a0001c0005t0005g0081 a0001c0005t0005g0082	5	218	0.0229	4	c.-49 others(15): Show c.-4928_-4927insCACA	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding		4713		chrX	TogoVar
ATRX_chrX_77499880_77791216	77790934	G G	GTATA GTATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01081.hp2 HG01943.hp1 HG02559.hp1 others(2): Show HG01081.hp2 HG01943.hp1 HG02559.hp1 HG02698.hp1 HG03130.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0014 a0001c0001 a0001c0003 a0001c0014	a0001c0001t0001 a0001c0001t0019 a0001c0003t0001 others(2): Show a0001c0001t0001 a0001c0001t0019 a0001c0003t0001 a0001c0003t0003 a0001c0014t0012	a0001c0001t0001g0096 a0001c0001t0019g0134 a0001c0003t0001g0094 others(2): Show a0001c0001t0001g0096 a0001c0001t0019g0134 a0001c0003t0001g0094 a0001c0003t0003g0171 a0001c0014t0012g0003	5	218	0.0229	4	c.-49 others(15): Show c.-4934_-4933insTATA	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding		4719		chrX	TogoVar
ATRX_chrX_77499880_77791216	77790990	C C	CTATA CTATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02135.hp1 HG02135.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0172 a0001c0001t0002g0172	1	218	0.0046	4	c.-49 others(15): Show c.-4990_-4989insTATA	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding		4775		chrX	TogoVar
ATRX_chrX_77499880_77791216	77790991	T T	TATAA TATAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02258.hp1 HG02922.hp1 HG03195.hp2 HG02258.hp1 HG02922.hp1 HG03195.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0002 a0001c0001t0003	a0001c0001t0002g0199 a0001c0001t0003g0201 a0001c0001t0003g0202 a0001c0001t0002g0199 a0001c0001t0003g0201 a0001c0001t0003g0202	3	218	0.0138	4	c.-49 others(15): Show c.-4991_-4990insTTAT	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding		4776		chrX	TogoVar
ATR_chr3_142444235_142583733	142472085	T T	TTGTG TTGTG	intron_variant intron_variant	MODIFIER	HG01175.hp1 HG01192.hp1 HG02056.hp2 others(14): Show HG01175.hp1 HG01192.hp1 HG02056.hp2 HG02148.hp2 HG03017.hp1 HG03688.hp2 HG04115.hp1 NA18957.hp2 NA18971.hp2 NA18985.hp2 NA18999.hp2 NA19009.hp1 NA19043.hp2 NA19056.hp2 NA19077.hp2 NA19085.hp1 NA20129.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0004 a0002c0002 others(1): Show a0001c0001 a0001c0004 a0002c0002 a0002c0005	a0001c0001t0001 a0001c0004t0001 a0002c0002t0001 others(1): Show a0001c0001t0001 a0001c0004t0001 a0002c0002t0001 a0002c0005t0001	a0001c0001t0001g0085 a0001c0001t0001g0087 a0001c0001t0001g0093 others(14): Show a0001c0001t0001g0085 a0001c0001t0001g0087 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0098 a0001c0001t0001g0099 a0001c0001t0001g0117 a0001c0001t0001g0129 a0001c0001t0001g0141 a0001c0004t0001g0025 a0001c0004t0001g0150 a0001c0004t0001g0153 a0001c0004t0001g0154 a0001c0004t0001g0155 a0002c0002t0001g0295 a0002c0005t0001g0214 a0002c0005t0001g0283	17	322	0.0528	4	c.622 others(23): Show c.6222-1906_6222-1903dupCACA	ATR	ENSG00000175054.16	transcript	ENST00000350721.9	protein_coding	36/46			chr3	TogoVar
ATR_chr3_142444235_142583733	142483874	A A	AATAT AATAT	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00423.hp2 HG00597.hp2 others(31): Show HG00323.hp1 HG00423.hp2 HG00597.hp2 HG00735.hp2 HG01070.hp1 HG01106.hp1 HG01109.hp1 HG01256.hp1 HG01258.hp2 HG01358.hp2 HG01934.hp1 HG02056.hp1 HG02135.hp2 HG02165.hp1 HG02273.hp2 HG02523.hp1 HG02602.hp2 HG02647.hp1 HG02683.hp2 HG03942.hp2 HG04199.hp2 NA18747.hp1 NA18944.hp1 NA18947.hp1 NA18960.hp2 NA18961.hp1 NA18962.hp1 NA18967.hp2 NA18986.hp2 NA19007.hp2 NA19054.hp1 NA19057.hp2 NA19082.hp2 NA19084.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0001 a0003c0003t0001g0164 a0003c0003t0001g0165 others(30): Show a0003c0003t0001g0001 a0003c0003t0001g0164 a0003c0003t0001g0165 a0003c0003t0001g0166 a0003c0003t0001g0167 a0003c0003t0001g0168 a0003c0003t0001g0169 a0003c0003t0001g0170 a0003c0003t0001g0171 a0003c0003t0001g0172 a0003c0003t0001g0173 a0003c0003t0001g0174 a0003c0003t0001g0176 a0003c0003t0001g0177 a0003c0003t0001g0178 a0003c0003t0001g0179 a0003c0003t0001g0180 a0003c0003t0001g0181 a0003c0003t0001g0182 a0003c0003t0001g0183 a0003c0003t0001g0184 a0003c0003t0001g0185 a0003c0003t0001g0186 a0003c0003t0001g0187 a0003c0003t0001g0188 a0003c0003t0001g0189 a0003c0003t0001g0190 a0003c0003t0001g0191 a0003c0003t0001g0192 a0003c0003t0001g0193 a0003c0003t0001g0194 a0003c0003t0001g0195 a0003c0003t0001g0196	34	322	0.1056	4	c.622 others(23): Show c.6221+1262_6221+1265dupATAT	ATR	ENSG00000175054.16	transcript	ENST00000350721.9	protein_coding	36/46			chr3	TogoVar
ATR_chr3_142444235_142583733	142495744	A A	AAAAT AAAAT	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG02257.hp1 HG02280.hp1 others(9): Show HG01109.hp2 HG02257.hp1 HG02280.hp1 HG02630.hp1 HG02717.hp2 HG02965.hp2 HG02970.hp1 HG03041.hp2 HG03486.hp1 NA18906.hp2 NA18951.hp1 NA21309.hp2	a0001 a0002 a0010 a0001 a0002 a0010	a0001c0001 a0001c0004 a0002c0005 others(1): Show a0001c0001 a0001c0004 a0002c0005 a0010c0014	a0001c0001t0001 a0001c0004t0001 a0001c0004t0002 others(2): Show a0001c0001t0001 a0001c0004t0001 a0001c0004t0002 a0002c0005t0001 a0010c0014t0001	a0001c0001t0001g0122 a0001c0004t0001g0147 a0001c0004t0001g0205 others(9): Show a0001c0001t0001g0122 a0001c0004t0001g0147 a0001c0004t0001g0205 a0001c0004t0001g0206 a0001c0004t0001g0207 a0001c0004t0001g0208 a0001c0004t0001g0209 a0001c0004t0001g0210 a0001c0004t0002g0003 a0001c0004t0002g0004 a0002c0005t0001g0280 a0010c0014t0001g0031	12	322	0.0373	4	c.589 others(21): Show c.5898+613_5898+616dupATTT	ATR	ENSG00000175054.16	transcript	ENST00000350721.9	protein_coding	34/46			chr3	TogoVar
ATR_chr3_142444235_142583733	142496278	C C	CATTA CATTA	intron_variant intron_variant	MODIFIER	HG00673.hp1 HG00741.hp1 NA18612.hp2 others(1): Show HG00673.hp1 HG00741.hp1 NA18612.hp2 NA19062.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0100 others(1): Show a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0100 a0001c0001t0001g0139	4	322	0.0124	4	c.589 others(19): Show c.5898+82_5898+83insTAAT	ATR	ENSG00000175054.16	transcript	ENST00000350721.9	protein_coding	34/46			chr3	TogoVar
ATR_chr3_142444235_142583733	142496278	C C	CTATA CTATA	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00323.hp2 HG00621.hp2 others(17): Show HG00099.hp2 HG00323.hp2 HG00621.hp2 HG01099.hp1 HG01123.hp1 HG01167.hp2 HG01517.hp1 HG02083.hp2 HG02129.hp1 HG02148.hp1 NA18945.hp2 NA18973.hp2 NA18983.hp2 NA18984.hp1 NA18998.hp1 NA19012.hp2 NA19054.hp2 NA19062.hp1 NA19240.hp1 NA20805.hp2	a0002 a0005 a0007 a0002 a0005 a0007	a0002c0002 a0002c0007 a0002c0016 others(3): Show a0002c0002 a0002c0007 a0002c0016 a0002c0020 a0005c0011 a0007c0017	a0002c0002t0001 a0002c0007t0001 a0002c0016t0001 others(3): Show a0002c0002t0001 a0002c0007t0001 a0002c0016t0001 a0002c0020t0001 a0005c0011t0001 a0007c0017t0001	a0002c0002t0001g0213 a0002c0002t0001g0218 a0002c0002t0001g0223 others(17): Show a0002c0002t0001g0213 a0002c0002t0001g0218 a0002c0002t0001g0223 a0002c0002t0001g0224 a0002c0002t0001g0228 a0002c0002t0001g0232 a0002c0002t0001g0236 a0002c0002t0001g0237 a0002c0002t0001g0240 a0002c0002t0001g0246 a0002c0002t0001g0249 a0002c0002t0001g0259 a0002c0002t0001g0263 a0002c0002t0001g0302 a0002c0002t0001g0315 a0002c0007t0001g0297 a0002c0016t0001g0298 a0002c0020t0001g0314 a0005c0011t0001g0272 a0007c0017t0001g0294	20	322	0.0621	4	c.589 others(19): Show c.5898+79_5898+82dupTATA	ATR	ENSG00000175054.16	transcript	ENST00000350721.9	protein_coding	34/46			chr3	TogoVar
ATR_chr3_142444235_142583733	142497573	T T	TAATA TAATA	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00280.hp1 HG00438.hp2 others(69): Show HG00099.hp2 HG00280.hp1 HG00438.hp2 HG00597.hp1 HG00621.hp1 HG00642.hp1 HG01069.hp1 HG01070.hp2 HG01243.hp2 HG01255.hp2 HG01261.hp1 HG01516.hp1 HG01517.hp2 HG01943.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp2 HG02083.hp1 HG02129.hp2 HG02145.hp1 HG02257.hp2 HG02300.hp2 HG02451.hp1 HG02523.hp2 HG02559.hp2 HG02572.hp1 HG02723.hp2 HG02896.hp1 HG02897.hp2 HG02970.hp1 HG03209.hp1 HG03688.hp1 HG03942.hp1 HG04184.hp1 HG04199.hp1 HG04228.hp2 NA18612.hp1 NA18942.hp2 NA18943.hp2 NA18945.hp1 NA18948.hp2 NA18950.hp1 NA18951.hp2 NA18956.hp2 NA18957.hp1 NA18961.hp2 NA18962.hp2 NA18963.hp2 NA18964.hp2 NA18965.hp2 NA18973.hp1 NA18977.hp1 NA18978.hp2 NA18982.hp1 NA18984.hp2 NA18985.hp2 NA18987.hp2 NA18991.hp1 NA18998.hp2 NA19006.hp1 NA19010.hp1 NA19011.hp1 NA19043.hp2 NA19055.hp1 NA19057.hp1 NA19060.hp1 NA19068.hp1 NA19070.hp2 NA19080.hp1 NA19082.hp1 NA19088.hp1 NA21309.hp1	a0001 a0002 a0010 others(1): Show a0001 a0002 a0010 a0011	a0001c0001 a0002c0007 a0010c0014 others(1): Show a0001c0001 a0002c0007 a0010c0014 a0011c0019	a0001c0001t0001 a0002c0007t0001 a0010c0014t0001 others(1): Show a0001c0001t0001 a0002c0007t0001 a0010c0014t0001 a0011c0019t0001	a0001c0001t0001g0005 a0001c0001t0001g0032 a0001c0001t0001g0033 others(69): Show a0001c0001t0001g0005 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0042 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0111 a0001c0001t0001g0112 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0117 a0001c0001t0001g0118 a0001c0001t0001g0123 a0001c0001t0001g0124 a0001c0001t0001g0129 a0001c0001t0001g0142 a0001c0001t0001g0144 a0002c0007t0001g0297 a0010c0014t0001g0031 a0011c0019t0001g0064	72	322	0.2236	4	c.555 others(21): Show c.5559-385_5559-382dupTATT	ATR	ENSG00000175054.16	transcript	ENST00000350721.9	protein_coding	32/46			chr3	TogoVar
ATR_chr3_142444235_142583733	142516984	A A	AATAT AATAT	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00597.hp1 HG00642.hp1 others(32): Show HG00280.hp1 HG00597.hp1 HG00642.hp1 HG01074.hp1 HG01516.hp1 HG01517.hp2 HG02027.hp2 HG02040.hp2 HG02071.hp2 HG02129.hp2 HG02145.hp1 HG02300.hp2 HG02818.hp1 HG03225.hp2 HG03471.hp1 HG04184.hp1 NA18945.hp1 NA18950.hp1 NA18964.hp2 NA18965.hp2 NA18973.hp1 NA18982.hp1 NA18985.hp2 NA18991.hp1 NA19006.hp1 NA19043.hp2 NA19055.hp1 NA19060.hp1 NA19070.hp2 NA19080.hp1 NA19240.hp1 NA20300.hp2 NA20752.hp2 NA20805.hp1 NA21309.hp1	a0001 a0003 a0005 a0001 a0003 a0005	a0001c0001 a0003c0003 a0005c0011 a0001c0001 a0003c0003 a0005c0011	a0001c0001t0001 a0003c0003t0001 a0005c0011t0001 a0001c0001t0001 a0003c0003t0001 a0005c0011t0001	a0001c0001t0001g0033 a0001c0001t0001g0035 a0001c0001t0001g0036 others(32): Show a0001c0001t0001g0033 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0051 a0001c0001t0001g0056 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0082 a0001c0001t0001g0088 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0111 a0001c0001t0001g0112 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0117 a0001c0001t0001g0124 a0001c0001t0001g0129 a0001c0001t0001g0133 a0001c0001t0001g0142 a0003c0003t0001g0163 a0005c0011t0001g0234 a0005c0011t0001g0272	35	322	0.1087	4	c.438 others(23): Show c.4383-1473_4383-1470dupATAT	ATR	ENSG00000175054.16	transcript	ENST00000350721.9	protein_coding	24/46			chr3	TogoVar
ATR_chr3_142444235_142583733	142543378	T T	TCCTC TCCTC	intron_variant intron_variant	MODIFIER	HG00673.hp1 HG01167.hp1 HG01192.hp1 others(14): Show HG00673.hp1 HG01167.hp1 HG01192.hp1 HG01256.hp2 HG01346.hp2 HG02071.hp2 NA18612.hp1 NA18612.hp2 NA18971.hp2 NA18985.hp2 NA18999.hp2 NA19012.hp1 NA19056.hp2 NA19062.hp2 NA19077.hp2 NA19085.hp1 NA19087.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0087 others(14): Show a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0001g0099 a0001c0001t0001g0100 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0117 a0001c0001t0001g0118 a0001c0001t0001g0119	17	322	0.0528	4	c.335 others(21): Show c.3358-625_3358-622dupGAGG	ATR	ENSG00000175054.16	transcript	ENST00000350721.9	protein_coding	16/46			chr3	TogoVar
ATR_chr3_142444235_142583733	142558523	A A	AAAAT AAAAT	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00597.hp2 HG00621.hp2 others(36): Show HG00323.hp1 HG00597.hp2 HG00621.hp2 HG00735.hp2 HG01070.hp1 HG01106.hp1 HG01109.hp1 HG01256.hp1 HG01258.hp2 HG01934.hp1 HG02055.hp2 HG02056.hp1 HG02135.hp2 HG02165.hp1 HG02523.hp1 HG02602.hp2 HG02647.hp1 HG02683.hp2 HG02895.hp2 HG02970.hp1 HG03471.hp1 HG03942.hp2 HG04199.hp2 NA18747.hp1 NA18944.hp1 NA18944.hp2 NA18947.hp1 NA18960.hp2 NA18961.hp1 NA18962.hp1 NA18967.hp2 NA18986.hp2 NA19007.hp2 NA19054.hp1 NA19057.hp2 NA19070.hp1 NA19082.hp2 NA19084.hp1 NA19240.hp1	a0002 a0003 a0005 others(1): Show a0002 a0003 a0005 a0010	a0002c0002 a0003c0003 a0005c0011 others(1): Show a0002c0002 a0003c0003 a0005c0011 a0010c0014	a0002c0002t0001 a0003c0003t0001 a0005c0011t0001 others(1): Show a0002c0002t0001 a0003c0003t0001 a0005c0011t0001 a0010c0014t0001	a0002c0002t0001g0241 a0002c0002t0001g0242 a0002c0002t0001g0315 others(35): Show a0002c0002t0001g0241 a0002c0002t0001g0242 a0002c0002t0001g0315 a0003c0003t0001g0001 a0003c0003t0001g0158 a0003c0003t0001g0160 a0003c0003t0001g0163 a0003c0003t0001g0164 a0003c0003t0001g0165 a0003c0003t0001g0166 a0003c0003t0001g0167 a0003c0003t0001g0168 a0003c0003t0001g0169 a0003c0003t0001g0170 a0003c0003t0001g0171 a0003c0003t0001g0173 a0003c0003t0001g0174 a0003c0003t0001g0176 a0003c0003t0001g0178 a0003c0003t0001g0179 a0003c0003t0001g0180 a0003c0003t0001g0181 a0003c0003t0001g0182 a0003c0003t0001g0184 a0003c0003t0001g0185 a0003c0003t0001g0186 a0003c0003t0001g0187 a0003c0003t0001g0188 a0003c0003t0001g0189 a0003c0003t0001g0190 a0003c0003t0001g0191 a0003c0003t0001g0192 a0003c0003t0001g0193 a0003c0003t0001g0194 a0003c0003t0001g0195 a0003c0003t0001g0196 a0005c0011t0001g0272 a0010c0014t0001g0031	39	322	0.1211	4	c.188 others(20): Show c.1885+97_1885+100dupATTT	ATR	ENSG00000175054.16	transcript	ENST00000350721.9	protein_coding	8/46			chr3	TogoVar
ATR_chr3_142444235_142583733	142558553	A A	AATAG AATAG	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG01123.hp2 HG02970.hp2 HG00099.hp1 HG01123.hp2 HG02970.hp2	a0001 a0002 a0008 a0001 a0002 a0008	a0001c0006 a0002c0002 a0008c0012 a0001c0006 a0002c0002 a0008c0012	a0001c0006t0001 a0002c0002t0001 a0008c0012t0001 a0001c0006t0001 a0002c0002t0001 a0008c0012t0001	a0001c0006t0001g0009 a0002c0002t0001g0023 a0008c0012t0001g0313 a0001c0006t0001g0009 a0002c0002t0001g0023 a0008c0012t0001g0313	3	322	0.0093	4	c.188 others(19): Show c.1885+70_1885+71insCTAT	ATR	ENSG00000175054.16	transcript	ENST00000350721.9	protein_coding	8/46			chr3	TogoVar
ATR_chr3_142444235_142583733	142558557	A A	AATAG AATAG	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG00738.hp1 HG01167.hp2 others(22): Show HG00642.hp2 HG00738.hp1 HG01167.hp2 HG01192.hp2 HG01358.hp2 HG02109.hp2 HG02280.hp2 HG02451.hp2 HG02559.hp1 HG02572.hp2 HG02630.hp2 HG02683.hp1 HG02717.hp1 HG02895.hp1 HG02897.hp1 HG02922.hp2 HG02976.hp1 HG03209.hp2 HG03453.hp2 HG03540.hp1 HG04115.hp2 HG04228.hp1 NA19043.hp1 NA20129.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0006 a0012	a0001c0004 a0001c0006 a0002c0002 others(3): Show a0001c0004 a0001c0006 a0002c0002 a0003c0003 a0006c0015 a0012c0021	a0001c0004t0001 a0001c0006t0001 a0002c0002t0001 others(3): Show a0001c0004t0001 a0001c0006t0001 a0002c0002t0001 a0003c0003t0001 a0006c0015t0001 a0012c0021t0001	a0001c0004t0001g0316 a0001c0004t0001g0317 a0001c0006t0001g0006 others(22): Show a0001c0004t0001g0316 a0001c0004t0001g0317 a0001c0006t0001g0006 a0001c0006t0001g0008 a0001c0006t0001g0010 a0001c0006t0001g0011 a0001c0006t0001g0012 a0001c0006t0001g0013 a0001c0006t0001g0014 a0001c0006t0001g0015 a0001c0006t0001g0016 a0001c0006t0001g0017 a0001c0006t0001g0018 a0001c0006t0001g0019 a0001c0006t0001g0020 a0001c0006t0001g0021 a0002c0002t0001g0238 a0002c0002t0001g0239 a0002c0002t0001g0240 a0002c0002t0001g0261 a0002c0002t0001g0264 a0002c0002t0001g0274 a0003c0003t0001g0177 a0006c0015t0001g0311 a0012c0021t0001g0320	25	322	0.0776	4	c.188 others(19): Show c.1885+63_1885+66dupCTAT	ATR	ENSG00000175054.16	transcript	ENST00000350721.9	protein_coding	8/46			chr3	TogoVar
ATR_chr3_142444235_142583733	142572372	C C	CTTTT CTTTT	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG02040.hp2 HG02071.hp2 others(5): Show HG00735.hp1 HG02040.hp2 HG02071.hp2 NA18950.hp1 NA18965.hp2 NA19060.hp1 NA19077.hp2 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0033 a0001c0001t0001g0087 a0001c0001t0001g0088 others(5): Show a0001c0001t0001g0033 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0089 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0142 a0001c0001t0001g0143	8	322	0.0248	4	c.60- others(19): Show c.60-4222_60-4219dupAAAA	ATR	ENSG00000175054.16	transcript	ENST00000350721.9	protein_coding	1/46			chr3	TogoVar
ATXN10_chr22_45666834_45850307	45667946	G G	GATAT GATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01943.hp1 HG02451.hp2 HG03139.hp2 others(1): Show HG01943.hp1 HG02451.hp2 HG03139.hp2 NA18989.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0005 a0001c0001t0001 a0001c0001t0005	a0001c0001t0001g0152 a0001c0001t0001g0164 a0001c0001t0001g0296 others(1): Show a0001c0001t0001g0152 a0001c0001t0001g0164 a0001c0001t0001g0296 a0001c0001t0005g0293	4	316	0.0127	4	c.-41 others(15): Show c.-4118_-4117insATAT	ATXN10	ENSG00000130638.18	transcript	ENST00000252934.10	protein_coding		3887		chr22	TogoVar
ATXN10_chr22_45666834_45850307	45667971	A A	ATATG ATATG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00735.hp2 HG01168.hp1 HG01169.hp2 others(1): Show HG00735.hp2 HG01168.hp1 HG01169.hp2 HG01192.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0125 a0001c0001t0003g0126 a0001c0001t0003g0127 others(1): Show a0001c0001t0003g0125 a0001c0001t0003g0126 a0001c0001t0003g0127 a0001c0001t0003g0128	4	316	0.0127	4	c.-40 others(15): Show c.-4093_-4092insTATG	ATXN10	ENSG00000130638.18	transcript	ENST00000252934.10	protein_coding		3862		chr22	TogoVar
ATXN10_chr22_45666834_45850307	45727331	A A	ATATC ATATC	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00408.hp1 HG00621.hp2 others(82): Show HG00099.hp2 HG00408.hp1 HG00621.hp2 HG00673.hp1 HG00673.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG01070.hp2 HG01099.hp2 HG01109.hp1 HG01109.hp2 HG01168.hp2 HG01192.hp1 HG01361.hp2 HG01515.hp2 HG02015.hp2 HG02071.hp1 HG02109.hp1 HG02109.hp2 HG02129.hp2 HG02135.hp2 HG02155.hp2 HG02523.hp1 HG02523.hp2 HG02572.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp2 HG02735.hp1 HG02895.hp2 HG02970.hp1 HG02976.hp1 HG03017.hp2 HG03098.hp1 HG03130.hp2 HG03209.hp1 HG03225.hp2 HG03239.hp1 HG03453.hp2 HG03471.hp1 HG03491.hp1 HG03540.hp1 HG04115.hp2 HG04204.hp2 HG06807.hp2 NA18906.hp2 NA18939.hp2 NA18942.hp1 NA18949.hp2 NA18951.hp1 NA18956.hp2 NA18963.hp1 NA18969.hp2 NA18970.hp2 NA18978.hp2 NA18980.hp1 NA18980.hp2 NA18983.hp1 NA18985.hp1 NA18988.hp2 NA18990.hp1 NA18993.hp2 NA18999.hp1 NA19000.hp1 NA19002.hp2 NA19011.hp2 NA19043.hp2 NA19058.hp2 NA19060.hp1 NA19060.hp2 NA19062.hp2 NA19074.hp2 NA19078.hp1 NA19083.hp1 NA19087.hp2 NA19088.hp1 NA19240.hp2 NA20752.hp1 NA20752.hp2 NA21309.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(8): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0006 a0001c0001t0008 a0001c0001t0009 a0001c0001t0011 a0001c0001t0013 a0001c0001t0014 a0001c0001t0016 a0002c0003t0001	a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0019 others(82): Show a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0019 a0001c0001t0001g0023 a0001c0001t0001g0025 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0037 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0043 a0001c0001t0001g0046 a0001c0001t0001g0050 a0001c0001t0001g0051 a0001c0001t0001g0056 a0001c0001t0001g0059 a0001c0001t0001g0061 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0075 a0001c0001t0001g0079 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0106 a0001c0001t0001g0129 a0001c0001t0001g0136 a0001c0001t0001g0147 a0001c0001t0001g0150 a0001c0001t0001g0154 a0001c0001t0001g0158 a0001c0001t0001g0162 a0001c0001t0001g0168 a0001c0001t0001g0171 a0001c0001t0001g0172 a0001c0001t0001g0173 a0001c0001t0001g0182 a0001c0001t0001g0183 a0001c0001t0001g0195 a0001c0001t0001g0198 a0001c0001t0001g0203 a0001c0001t0001g0206 a0001c0001t0001g0209 a0001c0001t0001g0214 a0001c0001t0001g0216 a0001c0001t0001g0228 a0001c0001t0001g0231 a0001c0001t0001g0235 a0001c0001t0001g0237 a0001c0001t0001g0241 a0001c0001t0001g0254 a0001c0001t0001g0255 a0001c0001t0001g0256 a0001c0001t0001g0257 a0001c0001t0001g0258 a0001c0001t0001g0259 a0001c0001t0001g0261 a0001c0001t0001g0265 a0001c0001t0001g0271 a0001c0001t0001g0280 a0001c0001t0001g0283 a0001c0001t0001g0284 a0001c0001t0001g0285 a0001c0001t0001g0286 a0001c0001t0001g0299 a0001c0001t0001g0312 a0001c0001t0002g0098 a0001c0001t0002g0099 a0001c0001t0002g0100 a0001c0001t0002g0134 a0001c0001t0002g0153 a0001c0001t0002g0212 a0001c0001t0003g0122 a0001c0001t0003g0125 a0001c0001t0003g0181 a0001c0001t0006g0119 a0001c0001t0008g0300 a0001c0001t0009g0133 a0001c0001t0011g0135 a0001c0001t0013g0018 a0001c0001t0014g0076 a0001c0001t0016g0301 a0002c0003t0001g0184	85	316	0.2690	4	c.729 others(21): Show c.729-2052_729-2049dupATCT	ATXN10	ENSG00000130638.18	transcript	ENST00000252934.10	protein_coding	6/11		INFO_REALIGN_3_PRIME	chr22	TogoVar
ATXN10_chr22_45666834_45850307	45740679	T T	TACAC TACAC	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG04199.hp1 NA18954.hp2 others(7): Show HG01109.hp1 HG04199.hp1 NA18954.hp2 NA18978.hp2 NA18985.hp2 NA18990.hp1 NA19000.hp1 NA19002.hp1 NA19066.hp1 NA19083.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0013 a0001c0001t0001 a0001c0001t0013	a0001c0001t0001g0002 a0001c0001t0001g0006 a0001c0001t0001g0007 others(7): Show a0001c0001t0001g0002 a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0015 a0001c0001t0001g0017 a0001c0001t0001g0023 a0001c0001t0001g0032 a0001c0001t0001g0057 a0001c0001t0001g0060 a0001c0001t0013g0018	10	316	0.0317	4	c.117 others(21): Show c.1173+179_1173+182dupCACA	ATXN10	ENSG00000130638.18	transcript	ENST00000252934.10	protein_coding	9/11		INFO_REALIGN_3_PRIME	chr22	TogoVar
ATXN10_chr22_45666834_45850307	45740739	C C	CGTGT CGTGT	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG02818.hp1 HG02970.hp1 others(3): Show HG02572.hp1 HG02818.hp1 HG02970.hp1 HG03540.hp1 HG03579.hp2 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0009 a0001c0001t0001 a0001c0001t0002 a0001c0001t0009	a0001c0001t0001g0129 a0001c0001t0002g0130 a0001c0001t0002g0131 others(3): Show a0001c0001t0001g0129 a0001c0001t0002g0130 a0001c0001t0002g0131 a0001c0001t0002g0132 a0001c0001t0002g0134 a0001c0001t0009g0133	6	316	0.0190	4	c.117 others(21): Show c.1173+214_1173+217dupGTGT	ATXN10	ENSG00000130638.18	transcript	ENST00000252934.10	protein_coding	9/11		INFO_REALIGN_3_PRIME	chr22	TogoVar
ATXN10_chr22_45666834_45850307	45773445	A A	ATTAT ATTAT	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00544.hp1 HG00558.hp1 others(91): Show HG00408.hp1 HG00544.hp1 HG00558.hp1 HG00621.hp1 HG01070.hp1 HG01071.hp1 HG01168.hp2 HG01433.hp2 HG01891.hp1 HG01891.hp2 HG02015.hp1 HG02055.hp2 HG02145.hp1 HG02155.hp1 HG02280.hp2 HG02451.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02630.hp2 HG02717.hp2 HG02818.hp1 HG02922.hp1 HG02965.hp2 HG02970.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp2 HG03139.hp2 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp1 HG03453.hp1 HG03491.hp2 HG03492.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp2 HG03669.hp2 HG03831.hp2 HG03834.hp1 HG03942.hp2 HG04204.hp2 HG06807.hp2 NA18522.hp1 NA18612.hp2 NA18939.hp2 NA18942.hp2 NA18946.hp1 NA18946.hp2 NA18949.hp1 NA18953.hp2 NA18954.hp1 NA18956.hp1 NA18961.hp1 NA18963.hp2 NA18964.hp1 NA18964.hp2 NA18967.hp1 NA18969.hp1 NA18975.hp2 NA18978.hp1 NA18979.hp2 NA18981.hp2 NA18983.hp1 NA18985.hp1 NA18988.hp1 NA18991.hp1 NA18995.hp2 NA18998.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19005.hp2 NA19056.hp1 NA19057.hp1 NA19057.hp2 NA19058.hp1 NA19066.hp2 NA19068.hp1 NA19074.hp1 NA19074.hp2 NA19078.hp1 NA19081.hp2 NA19083.hp2 NA19087.hp1 NA19090.hp2 NA19240.hp1 NA20129.hp1 NA20300.hp2 NA20752.hp1 NA20805.hp2 NA21309.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0002 a0001c0001 a0003c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(7): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 a0001c0001t0008 a0001c0001t0009 a0001c0001t0010 a0001c0001t0012 a0001c0001t0017 a0003c0002t0001	a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0064 others(91): Show a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0091 a0001c0001t0001g0114 a0001c0001t0001g0121 a0001c0001t0001g0136 a0001c0001t0001g0142 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0150 a0001c0001t0001g0171 a0001c0001t0001g0173 a0001c0001t0001g0185 a0001c0001t0001g0191 a0001c0001t0001g0192 a0001c0001t0001g0214 a0001c0001t0001g0215 a0001c0001t0001g0217 a0001c0001t0001g0220 a0001c0001t0001g0221 a0001c0001t0001g0222 a0001c0001t0001g0223 a0001c0001t0001g0224 a0001c0001t0001g0226 a0001c0001t0001g0227 a0001c0001t0001g0228 a0001c0001t0001g0229 a0001c0001t0001g0233 a0001c0001t0001g0234 a0001c0001t0001g0235 a0001c0001t0001g0236 a0001c0001t0001g0242 a0001c0001t0001g0247 a0001c0001t0001g0252 a0001c0001t0001g0262 a0001c0001t0001g0263 a0001c0001t0001g0266 a0001c0001t0001g0271 a0001c0001t0001g0288 a0001c0001t0001g0289 a0001c0001t0001g0290 a0001c0001t0001g0291 a0001c0001t0001g0294 a0001c0001t0001g0295 a0001c0001t0001g0296 a0001c0001t0001g0297 a0001c0001t0001g0303 a0001c0001t0002g0045 a0001c0001t0002g0089 a0001c0001t0002g0092 a0001c0001t0002g0093 a0001c0001t0002g0094 a0001c0001t0002g0095 a0001c0001t0002g0096 a0001c0001t0002g0097 a0001c0001t0002g0098 a0001c0001t0002g0099 a0001c0001t0002g0100 a0001c0001t0002g0101 a0001c0001t0002g0102 a0001c0001t0002g0104 a0001c0001t0002g0107 a0001c0001t0002g0108 a0001c0001t0002g0109 a0001c0001t0002g0113 a0001c0001t0002g0115 a0001c0001t0002g0116 a0001c0001t0002g0120 a0001c0001t0002g0130 a0001c0001t0002g0131 a0001c0001t0002g0132 a0001c0001t0002g0134 a0001c0001t0002g0153 a0001c0001t0002g0248 a0001c0001t0004g0111 a0001c0001t0004g0112 a0001c0001t0005g0070 a0001c0001t0005g0293 a0001c0001t0008g0300 a0001c0001t0008g0302 a0001c0001t0009g0133 a0001c0001t0010g0103 a0001c0001t0012g0080 a0001c0001t0017g0246 a0003c0002t0001g0063	94	316	0.2975	4	c.117 others(25): Show c.1173+32934_1173+32937dupATTT	ATXN10	ENSG00000130638.18	transcript	ENST00000252934.10	protein_coding	9/11		INFO_REALIGN_3_PRIME	chr22	TogoVar
ATXN10_chr22_45666834_45850307	45773844	A A	ATGTT ATGTT	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00408.hp1 HG01070.hp1 others(29): Show HG00140.hp2 HG00408.hp1 HG01070.hp1 HG01071.hp1 HG01168.hp2 HG01433.hp2 HG02145.hp1 HG02602.hp1 HG02723.hp2 HG03239.hp1 HG03491.hp2 HG03492.hp2 HG03669.hp2 HG03831.hp2 NA18949.hp1 NA18953.hp2 NA18961.hp1 NA18964.hp1 NA18967.hp1 NA18975.hp2 NA18978.hp1 NA18988.hp1 NA18998.hp2 NA19003.hp1 NA19057.hp1 NA19058.hp1 NA19074.hp1 NA19081.hp2 NA19090.hp2 NA20752.hp1 NA20805.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0010 a0001c0001t0016	a0001c0001t0001g0091 a0001c0001t0001g0114 a0001c0001t0001g0217 others(29): Show a0001c0001t0001g0091 a0001c0001t0001g0114 a0001c0001t0001g0217 a0001c0001t0001g0303 a0001c0001t0002g0045 a0001c0001t0002g0089 a0001c0001t0002g0092 a0001c0001t0002g0093 a0001c0001t0002g0094 a0001c0001t0002g0095 a0001c0001t0002g0096 a0001c0001t0002g0097 a0001c0001t0002g0098 a0001c0001t0002g0099 a0001c0001t0002g0100 a0001c0001t0002g0101 a0001c0001t0002g0102 a0001c0001t0002g0104 a0001c0001t0002g0105 a0001c0001t0002g0107 a0001c0001t0002g0108 a0001c0001t0002g0109 a0001c0001t0002g0113 a0001c0001t0002g0115 a0001c0001t0002g0116 a0001c0001t0002g0120 a0001c0001t0002g0153 a0001c0001t0002g0248 a0001c0001t0004g0111 a0001c0001t0004g0112 a0001c0001t0010g0103 a0001c0001t0016g0301	32	316	0.1013	4	c.117 others(25): Show c.1174-33097_1174-33094dupGTTT	ATXN10	ENSG00000130638.18	transcript	ENST00000252934.10	protein_coding	9/11		INFO_REALIGN_3_PRIME	chr22	TogoVar

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