Joint Open Genome and Omics Platform (JoGo)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
ZNF84_chr12_133032509_133068299	133046882	A A	ATATATTA others(33): Show ATATATTATATTATTTTTAATATAATATTTATATTATATAT	intron_variant intron_variant	MODIFIER	HG02738.hp2 HG02738.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0012 a0001c0001t0012	a0001c0001t0012g0125 a0001c0001t0012g0125	1	178	0.0056	40	c.16- others(55): Show c.16-1065_16-1064insATTATTTTTAATATAATATTTATATTATAT ATTATATTAT	ZNF84	ENSG00000198040.11	transcript	ENST00000539354.6	protein_coding	2/4		INFO_REALIGN_3_PRIME	chr12	TogoVar
ZNF888_chr19_52899415_52928428	52919648	G G	GGCCGCCA others(33): Show GGCCGCCATCCCATCTAGGAAGCGAGGAGCGCCTCTTCCCC	intron_variant intron_variant	MODIFIER	HG02080.hp2 HG02080.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0061 a0001c0001t0002g0061	1	424	0.0024	40	c.-17 others(57): Show c.-177-751_-177-712dupGGGGAAGAGGCGCTCCTCGCTTCCTAGA TGGGATGGCGGC	ZNF888	ENSG00000213793.6	transcript	ENST00000638862.2	protein_coding	1/4			chr19	TogoVar
ZNHIT6_chr1_85644417_85713433	85667961	A A	AAAAAAAA others(33): Show AAAAAAAAAAAAAAAAAATGTATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA19000.hp1 NA19000.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0136 a0001c0001t0004g0136	1	50	0.0200	40	c.124 others(59): Show c.1247+9274_1247+9275insATATATATATATATATATATACATTT TTTTTTTTTTTTTT	ZNHIT6	ENSG00000117174.11	transcript	ENST00000370574.4	protein_coding	8/9			chr1	TogoVar
ZP3_chr7_76419950_76447069	76423016	A A	AGAGAGAG others(33): Show AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGG	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0238 a0001c0002t0001g0238	1	421	0.0024	40	c.-19 others(51): Show c.-1949_-1948insGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA GAGAGG	ZP3	ENSG00000188372.15	transcript	ENST00000394857.8	protein_coding		1933		chr7	TogoVar
ZP3_chr7_76419950_76447069	76433124	T T	TTTGGTTT others(33): Show TTTGGTTTTGGTTGGTTTTGGTTGGTTTTGGTTGGTTTTGG	intron_variant intron_variant	MODIFIER	HG01070.hp2 HG01167.hp1 HG01169.hp2 others(22): Show HG01070.hp2 HG01167.hp1 HG01169.hp2 HG01192.hp1 HG01346.hp1 HG02155.hp1 NA18941.hp2 NA18944.hp2 NA18949.hp2 NA18950.hp1 NA18952.hp1 NA18965.hp2 NA18982.hp2 NA18985.hp2 NA18989.hp1 NA18995.hp2 NA19005.hp2 NA19063.hp2 NA19064.hp2 NA19066.hp2 NA19074.hp2 NA19078.hp2 NA19083.hp1 NA19085.hp1 NA19090.hp1	a0001 a0002 a0001 a0002	a0001c0002 a0002c0001 a0001c0002 a0002c0001	a0001c0002t0001 a0002c0001t0001 a0001c0002t0001 a0002c0001t0001	a0001c0002t0001g0041 a0001c0002t0001g0048 a0002c0001t0001g0014 others(21): Show a0001c0002t0001g0041 a0001c0002t0001g0048 a0002c0001t0001g0014 a0002c0001t0001g0266 a0002c0001t0001g0276 a0002c0001t0001g0277 a0002c0001t0001g0278 a0002c0001t0001g0279 a0002c0001t0001g0280 a0002c0001t0001g0284 a0002c0001t0001g0300 a0002c0001t0001g0301 a0002c0001t0001g0303 a0002c0001t0001g0306 a0002c0001t0001g0307 a0002c0001t0001g0312 a0002c0001t0001g0313 a0002c0001t0001g0314 a0002c0001t0001g0325 a0002c0001t0001g0331 a0002c0001t0001g0332 a0002c0001t0001g0333 a0002c0001t0001g0334 a0002c0001t0001g0336	25	121	0.2066	40	c.535 others(55): Show c.535+103_535+142dupGGTTGGTTTTGGTTGGTTTTGGTTGGTTTT GGTTGGTTTT	ZP3	ENSG00000188372.15	transcript	ENST00000394857.8	protein_coding	3/7		INFO_REALIGN_3_PRIME	chr7	TogoVar
ZP4_chr1_237877404_237895922	237883733	G G	GAGAGAGA others(33): Show GAGAGAGAGGAAGAGAGAGGAAGAGAGAGGAAGAGAGAGGA	intron_variant intron_variant	MODIFIER	NA19075.hp2 NA19075.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0200 a0001c0001t0001g0200	1	365	0.0027	40	c.139 others(57): Show c.1391-888_1391-887insTCCTCTCTCTTCCTCTCTCTTCCTCTCT CTTCCTCTCTCT	ZP4	ENSG00000116996.10	transcript	ENST00000366570.5	protein_coding	10/11			chr1	TogoVar
ZP4_chr1_237877404_237895922	237883763	G G	GAGAGAGA others(33): Show GAGAGAGAGGAAGAGAGAGGAAGAGAGAGGAAGAGAGAGGA	intron_variant intron_variant	MODIFIER	HG02155.hp1 HG02622.hp2 HG02717.hp2 others(1): Show HG02155.hp1 HG02622.hp2 HG02717.hp2 HG03471.hp1	a0001 a0002 a0005 a0001 a0002 a0005	a0001c0001 a0002c0003 a0005c0006 a0001c0001 a0002c0003 a0005c0006	a0001c0001t0001 a0002c0003t0002 a0005c0006t0001 a0001c0001t0001 a0002c0003t0002 a0005c0006t0001	a0001c0001t0001g0224 a0002c0003t0002g0253 a0002c0003t0002g0254 others(1): Show a0001c0001t0001g0224 a0002c0003t0002g0253 a0002c0003t0002g0254 a0005c0006t0001g0064	4	111	0.0360	40	c.139 others(57): Show c.1391-957_1391-918dupTCCTCTCTCTTCCTCTCTCTTCCTCTCT CTTCCTCTCTCT	ZP4	ENSG00000116996.10	transcript	ENST00000366570.5	protein_coding	10/11			chr1	TogoVar
ZRANB3_chr2_135191969_135536218	135272414	C C	CTTTTTTT others(33): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG04204.hp2 HG04204.hp2	a0010 a0010	a0010c0014 a0010c0014	a0010c0014t0002 a0010c0014t0002	a0010c0014t0002g0012 a0010c0014t0002g0012	1	72	0.0139	40	c.108 others(57): Show c.1087-528_1087-527insAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAA	ZRANB3	ENSG00000121988.18	transcript	ENST00000264159.11	protein_coding	9/20			chr2	TogoVar
ZSCAN22_chr19_58321994_58347332	58326654	T T	TCACCCTC others(33): Show TCACCCTCAGCCTCACACAGGCACCCTCAGCCTCACACAGG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02896.hp1 HG02976.hp1 HG03516.hp1 HG02896.hp1 HG02976.hp1 HG03516.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0004c0005 a0001c0001 a0004c0005	a0001c0001t0030 a0004c0005t0001 a0001c0001t0030 a0004c0005t0001	a0001c0001t0030g0105 a0004c0005t0001g0103 a0004c0005t0001g0104 a0001c0001t0030g0105 a0004c0005t0001g0103 a0004c0005t0001g0104	3	290	0.0103	40	c.-51 others(49): Show c.-512_-511insCACCCTCAGCCTCACACAGGCACCCTCAGCCTCACA CAGG	ZSCAN22	ENSG00000182318.6	transcript	ENST00000329665.5	protein_coding		339		chr19	TogoVar
ZSWIM2_chr2_186822475_186854170	186846806	C C	CATATATA others(33): Show CATATATATATATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18972.hp2 NA19007.hp1 NA18972.hp2 NA19007.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0003 a0002c0003t0003	a0002c0003t0003g0046 a0002c0003t0003g0047 a0002c0003t0003g0046 a0002c0003t0003g0047	2	302	0.0066	40	c.242 others(55): Show c.242+912_242+913insATATATATATATATATATATATATATATAT ATATATATAT	ZSWIM2	ENSG00000163012.4	transcript	ENST00000295131.3	protein_coding	2/8			chr2	TogoVar
ZSWIM5_chr1_45011399_45211605	45044746	A A	AAAAAAAA others(33): Show AAAAAAAAAATATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01099.hp1 HG01099.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0181 a0001c0001t0001g0181	1	131	0.0076	40	c.143 others(59): Show c.1433-1352_1433-1351insATATATATATATATATATATATATAT ATATATTTTTTTTT	ZSWIM5	ENSG00000162415.7	transcript	ENST00000359600.6	protein_coding	5/13			chr1	TogoVar
ZSWIM5_chr1_45011399_45211605	45044789	A A	AAATATAT others(33): Show AAATATATATATAAATATATATATATAAATATATATATATT	intron_variant intron_variant	MODIFIER	HG02896.hp1 HG02897.hp1 HG02896.hp1 HG02897.hp1	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0001 a0001c0005t0001	a0001c0005t0001g0067 a0001c0005t0001g0068 a0001c0005t0001g0067 a0001c0005t0001g0068	2	228	0.0088	40	c.143 others(59): Show c.1433-1395_1433-1394insAATATATATATATTTATATATATATA TTTATATATATATT	ZSWIM5	ENSG00000162415.7	transcript	ENST00000359600.6	protein_coding	5/13			chr1	TogoVar
ZSWIM5_chr1_45011399_45211605	45044790	A A	AATATATA others(33): Show AATATATATATAAATATATATATATAAATATATATATAAAT	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG00741.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0157 a0001c0001t0001g0157	1	88	0.0114	40	c.143 others(59): Show c.1433-1396_1433-1395insATTTATATATATATTTATATATATAT ATTTATATATATAT	ZSWIM5	ENSG00000162415.7	transcript	ENST00000359600.6	protein_coding	5/13			chr1	TogoVar
ZSWIM6_chr5_61327258_61551172	61454214	A A	AATTTTAT others(33): Show AATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTT	intron_variant intron_variant	MODIFIER	NA18966.hp2 NA18974.hp2 NA18966.hp2 NA18974.hp2	a0005 a0005	a0005c0009 a0005c0009	a0005c0009t0003 a0005c0009t0003	a0005c0009t0003g0051 a0005c0009t0003g0237 a0005c0009t0003g0051 a0005c0009t0003g0237	2	21	0.0952	40	c.677 others(59): Show c.677-18446_677-18407dupATTTTATTTTATTTTATTTTATTTTA TTTTATTTTATTTT	ZSWIM6	ENSG00000130449.6	transcript	ENST00000252744.6	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr5	TogoVar
ZSWIM9_chr19_48165680_48202620	48187574	T T	TTATATAT others(33): Show TTATATATTATATAATATAATATTATATATTATATAATATA	intron_variant intron_variant	MODIFIER	NA18959.hp1 NA18959.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0166 a0001c0002t0001g0166	1	339	0.0029	40	c.588 others(57): Show c.588+4807_588+4808insTATATATTATATAATATAATATTATATA TTATATAATATA	ZSWIM9	ENSG00000185453.13	transcript	ENST00000614654.2	protein_coding	3/3			chr19	TogoVar
ZSWIM9_chr19_48165680_48202620	48187981	T T	TAGACAGA others(33): Show TAGACAGACAGACAGACAGACAGATAGATAGATAGATAGAC	intron_variant intron_variant	MODIFIER	HG03579.hp2 HG03579.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0301 a0001c0001t0001g0301	1	381	0.0026	40	c.588 others(57): Show c.588+5217_588+5218insCAGACAGACAGACAGACAGATAGATAGA TAGATAGACAGA	ZSWIM9	ENSG00000185453.13	transcript	ENST00000614654.2	protein_coding	3/3		INFO_REALIGN_3_PRIME	chr19	TogoVar
ZWILCH_chr15_66500326_66555130	66517430	G G	GTGTGTGT others(33): Show GTGTGTGTGTGTGTATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	NA19058.hp1 NA19058.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0317 a0001c0001t0001g0317	1	48	0.0208	40	c.321 others(57): Show c.321-1448_321-1447insGTGTGTGTGTGTATATATATATATATAT ATATATATATAT	ZWILCH	ENSG00000174442.12	transcript	ENST00000307897.10	protein_coding	4/18		INFO_REALIGN_3_PRIME	chr15	TogoVar
ZYG11A_chr1_52837760_52899998	52870168	T T	TTCACTTC others(33): Show TTCACTTCCTAGATGGGATGGCGGCCGGGAAGAGACGCTCG	intron_variant intron_variant	MODIFIER	HG03471.hp1 HG03471.hp1	a0012 a0012	a0012c0012 a0012c0012	a0012c0012t0002 a0012c0012t0002	a0012c0012t0002g0078 a0012c0012t0002g0078	1	255	0.0039	40	c.154 others(59): Show c.1542+2420_1542+2459dupAAGAGACGCTCGTCACTTCCTAGATG GGATGGCGGCCGGG	ZYG11A	ENSG00000203995.11	transcript	ENST00000371528.2	protein_coding	8/13		INFO_REALIGN_3_PRIME	chr1	TogoVar
ZYG11B_chr1_52721453_52832336	52776225	A A	AATATATA others(33): Show AATATATATATATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03834.hp2 HG03834.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0247 a0001c0002t0003g0247	1	349	0.0029	40	c.952 others(57): Show c.952-3627_952-3626insTATATATATATATATATATATATATATA TATATATATATA	ZYG11B	ENSG00000162378.13	transcript	ENST00000294353.7	protein_coding	3/13		INFO_REALIGN_3_PRIME	chr1	TogoVar
ZYG11B_chr1_52721453_52832336	52776229	A A	AAAAAAAA others(33): Show AAAAAAAAAAAATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18978.hp1 NA19000.hp2 NA18978.hp1 NA19000.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0018 a0001c0001t0018	a0001c0001t0018g0079 a0001c0001t0018g0104 a0001c0001t0018g0079 a0001c0001t0018g0104	2	10	0.2000	40	c.952 others(57): Show c.952-3623_952-3622insAAAAAAAAAATATATATATATATATATA TATATATATATA	ZYG11B	ENSG00000162378.13	transcript	ENST00000294353.7	protein_coding	3/13		INFO_REALIGN_3_PRIME	chr1	TogoVar
ZYG11B_chr1_52721453_52832336	52776229	A A	AAAAAAAA others(33): Show AAAAAAAAAATATATACATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01257.hp2 HG01258.hp1 HG01257.hp2 HG01258.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0016 a0001c0001t0078 a0001c0001t0016 a0001c0001t0078	a0001c0001t0016g0040 a0001c0001t0078g0039 a0001c0001t0016g0040 a0001c0001t0078g0039	2	10	0.2000	40	c.952 others(57): Show c.952-3623_952-3622insAAAAAAAATATATACATATATATATATA TATATATATATA	ZYG11B	ENSG00000162378.13	transcript	ENST00000294353.7	protein_coding	3/13		INFO_REALIGN_3_PRIME	chr1	TogoVar
ZYG11B_chr1_52721453_52832336	52776229	A A	AAAAAAAA others(33): Show AAAAAAAATATATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18998.hp2 NA18998.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0126 a0001c0001t0011g0126	1	9	0.1111	40	c.952 others(57): Show c.952-3623_952-3622insAAAAAATATATATATATATATATATATA TATATATATATA	ZYG11B	ENSG00000162378.13	transcript	ENST00000294353.7	protein_coding	3/13		INFO_REALIGN_3_PRIME	chr1	TogoVar
ZYG11B_chr1_52721453_52832336	52776229	A A	AATATATA others(33): Show AATATATATATATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01358.hp2 HG01358.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0028 a0001c0002t0028	a0001c0002t0028g0252 a0001c0002t0028g0252	1	9	0.1111	40	c.952 others(57): Show c.952-3608_952-3607insATATATATATATATATATATATATATAT ATATATATATAT	ZYG11B	ENSG00000162378.13	transcript	ENST00000294353.7	protein_coding	3/13		INFO_REALIGN_3_PRIME	chr1	TogoVar
ZYG11B_chr1_52721453_52832336	52783955	T T	TATGTGTA others(33): Show TATGTGTATATACATCTATACATATTTGTATATATCACAAA	intron_variant intron_variant	MODIFIER	HG01069.hp2 HG01069.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0152 a0001c0001t0011g0152	1	350	0.0029	40	c.109 others(57): Show c.1093-921_1093-920insTGTGTATATACATCTATACATATTTGTA TATATCACAAAA	ZYG11B	ENSG00000162378.13	transcript	ENST00000294353.7	protein_coding	4/13		INFO_REALIGN_3_PRIME	chr1	TogoVar
ZYG11B_chr1_52721453_52832336	52793864	T T	TTTCCTTC others(33): Show TTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC	intron_variant intron_variant	MODIFIER	HG02630.hp1 HG02630.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0067 a0001c0001t0067	a0001c0001t0067g0352 a0001c0001t0067g0352	1	347	0.0029	40	c.133 others(59): Show c.1335-2425_1335-2424insCTTCCTTCCTTCCTTCCTTCCTTCCT TCCTTCCTTCCTTC	ZYG11B	ENSG00000162378.13	transcript	ENST00000294353.7	protein_coding	6/13		INFO_REALIGN_3_PRIME	chr1	TogoVar
ZZZ3_chr1_77557416_77687658	77687094	A A	AGAGCACC others(33): Show AGAGCACCTCTGCCCCGCTGCTCCACCGTCTGGGAAGTGAG	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18522.hp1 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0194 a0001c0001t0001g0194	1	346	0.0029	40	c.-49 others(51): Show c.-4913_-4912insCTCACTTCCCAGACGGTGGAGCAGCGGGGCAGAG GTGCTC	ZZZ3	ENSG00000036549.13	transcript	ENST00000370801.8	protein_coding		4437		chr1	TogoVar

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