regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
LATS2_chr13_20968036_21066586 | 21050147 | G | GATAGATA others(33): Show |
intron_variant | MODIFIER | HG00423.hp1 HG00642.hp1 HG01070.hp1 others(26): Show |
a0001a0002a0003others(1): Show | a0001c0001a0002c0002a0003c0003others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(7): Show | a0001c0001t0001g0191a0001c0001t0001g0192a0001c0001t0001g0196others(26): Show | 29 | 316 | 0.0918 | 40 | c.-20 others(59): Show |
LATS2 | ENSG00000150457.9 | transcript | ENST00000382592.5 | protein_coding | 1/7 | chr13 | TogoVar | ||||||
LATS2_chr13_20968036_21066586 | 21050147 | G | GATAGATA others(33): Show |
intron_variant | MODIFIER | NA19004.hp2 NA19065.hp2 NA19087.hp2 others(1): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0002a0002c0002t0010 | a0001c0001t0002g0166a0001c0001t0002g0176a0001c0001t0002g0177others(1): Show | 4 | 316 | 0.0127 | 40 | c.-20 others(59): Show |
LATS2 | ENSG00000150457.9 | transcript | ENST00000382592.5 | protein_coding | 1/7 | chr13 | TogoVar | ||||||
LAX1_chr1_203760183_203781372 | 203770433 | A | AAGAGAGA others(33): Show |
intron_variant | MODIFIER | NA18975.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0231 | 1 | 422 | 0.0024 | 40 | c.90- others(53): Show |
LAX1 | ENSG00000122188.13 | transcript | ENST00000442561.7 | protein_coding | 1/4 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
LCK_chr1_32246265_32291165 | 32272623 | A | AAGAGAGA others(33): Show |
intron_variant | MODIFIER | HG02257.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0184 | 1 | 274 | 0.0037 | 40 | c.-5- others(55): Show |
LCK | ENSG00000182866.18 | transcript | ENST00000336890.10 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
LCLAT1_chr2_30442246_30649225 | 30638782 | T | TTCTCCCA others(33): Show |
intron_variant | MODIFIER | HG00099.hp2 HG00140.hp2 HG00642.hp1 others(30): Show |
a0001 | a0001c0001 | a0001c0001t0004a0001c0001t0071a0001c0001t0072others(4): Show | a0001c0001t0004g0261a0001c0001t0004g0262a0001c0001t0004g0263others(30): Show | 33 | 366 | 0.0902 | 40 | c.629 others(57): Show |
LCLAT1 | ENSG00000172954.14 | transcript | ENST00000379509.8 | protein_coding | 5/5 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
LCMT2_chr15_43318649_43335573 | 43334633 | T | TTATATAT others(33): Show |
upstream_gene_variant | MODIFIER | NA19075.hp1 | a0001 | a0001c0001 | a0001c0001t0004 | a0001c0001t0004g0000 | 1 | 410 | 0.0024 | 40 | c.-41 others(51): Show |
LCMT2 | ENSG00000168806.8 | transcript | ENST00000305641.7 | protein_coding | 4061 | chr15 | TogoVar | ||||||
LCN10_chr9_136733170_136747940 | 136746217 | G | GGGGGAAA others(33): Show |
upstream_gene_variant | MODIFIER | HG02965.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 | 1 | 392 | 0.0026 | 40 | c.-33 others(51): Show |
LCN10 | ENSG00000187922.14 | transcript | ENST00000497771.6 | protein_coding | 3278 | chr9 | TogoVar | ||||||
LCN15_chr9_136754634_136769518 | 136769471 | C | CGCCACCC others(33): Show |
upstream_gene_variant | MODIFIER | HG02109.hp2 | a0002 | a0002c0004 | a0002c0004t0001 | a0002c0004t0001g0011 | 1 | 356 | 0.0028 | 40 | c.-49 others(51): Show |
LCN15 | ENSG00000177984.7 | transcript | ENST00000316144.6 | protein_coding | 4954 | chr9 | TogoVar | ||||||
LCP2_chr5_170241233_170302777 | 170268880 | C | CATGCACA others(33): Show |
intron_variant | MODIFIER | HG00140.hp1 HG00280.hp2 HG00323.hp2 others(214): Show |
a0001a0003a0004 | a0001c0001a0001c0002a0001c0003others(5): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(34): Show | a0001c0001t0001g0127a0001c0001t0001g0134a0001c0001t0001g0135others(213): Show | 217 | 384 | 0.5651 | 40 | c.524 others(55): Show |
LCP2 | ENSG00000043462.13 | transcript | ENST00000046794.10 | protein_coding | 7/20 | chr5 | TogoVar | ||||||
LDAH_chr2_20679031_20828101 | 20710606 | G | GTGTGTAT others(33): Show |
intron_variant | MODIFIER | HG03471.hp2 | a0001 | a0001c0001 | a0001c0001t0006 | a0001c0001t0006g0242 | 1 | 258 | 0.0039 | 40 | c.704 others(57): Show |
LDAH | ENSG00000118961.15 | transcript | ENST00000237822.8 | protein_coding | 5/6 | chr2 | TogoVar | ||||||
LDAH_chr2_20679031_20828101 | 20716720 | G | GTATATAT others(33): Show |
intron_variant | MODIFIER | HG02080.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0109 | 1 | 258 | 0.0039 | 40 | c.704 others(59): Show |
LDAH | ENSG00000118961.15 | transcript | ENST00000237822.8 | protein_coding | 5/6 | chr2 | TogoVar | ||||||
LDLRAD3_chr11_35939062_36237136 | 36128117 | C | CATATATA others(33): Show |
intron_variant | MODIFIER | HG03540.hp2 NA18975.hp1 |
a0001a0007 | a0001c0002a0007c0008 | a0001c0002t0008a0007c0008t0001 | a0001c0002t0008g0038a0007c0008t0001g0032 | 2 | 236 | 0.0085 | 40 | c.454 others(59): Show |
LDLRAD3 | ENSG00000179241.13 | transcript | ENST00000315571.6 | protein_coding | 4/5 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | |||||
LDLRAD3_chr11_35939062_36237136 | 36146773 | C | CTTTATTT others(33): Show |
intron_variant | MODIFIER | HG02145.hp1 HG02451.hp2 HG02523.hp1 others(3): Show |
a0001a0002 | a0001c0001a0001c0002a0002c0003 | a0001c0001t0001a0001c0001t0007a0001c0002t0004others(1): Show | a0001c0001t0001g0119a0001c0001t0001g0161a0001c0001t0001g0210others(3): Show | 6 | 236 | 0.0254 | 40 | c.454 others(59): Show |
LDLRAD3 | ENSG00000179241.13 | transcript | ENST00000315571.6 | protein_coding | 4/5 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | |||||
LDLRAD3_chr11_35939062_36237136 | 36165976 | C | CCCTCCCT others(33): Show |
intron_variant | MODIFIER | HG03209.hp1 | a0001 | a0001c0001 | a0001c0001t0006 | a0001c0001t0006g0203 | 1 | 236 | 0.0042 | 40 | c.455 others(59): Show |
LDLRAD3 | ENSG00000179241.13 | transcript | ENST00000315571.6 | protein_coding | 4/5 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | |||||
LDLRAD4_chr18_13213760_13657751 | 13498759 | A | ATCCCGCC others(33): Show |
intron_variant | MODIFIER | HG02976.hp1 | a0001 | a0001c0001 | a0001c0001t0069 | a0001c0001t0069g0172 | 1 | 178 | 0.0056 | 40 | c.181 others(59): Show |
LDLRAD4 | ENSG00000168675.19 | transcript | ENST00000359446.11 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chr18 | TogoVar | |||||
LEF1_chr4_108042548_108173932 | 108077455 | A | AGTCTGGG others(33): Show |
intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(158): Show |
a0001a0002a0004 | a0001c0001a0001c0002a0001c0007others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(12): Show | a0001c0001t0001g0119a0001c0001t0001g0120a0001c0001t0001g0127others(158): Show | 161 | 264 | 0.6099 | 40 | c.100 others(57): Show |
LEF1 | ENSG00000138795.10 | transcript | ENST00000265165.6 | protein_coding | 8/11 | chr4 | TogoVar | ||||||
LEF1_chr4_108042548_108173932 | 108077491 | G | GCCCCGTC others(33): Show |
intron_variant | MODIFIER | HG00280.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0182 | 1 | 264 | 0.0038 | 40 | c.100 others(57): Show |
LEF1 | ENSG00000138795.10 | transcript | ENST00000265165.6 | protein_coding | 8/11 | chr4 | TogoVar | ||||||
LEF1_chr4_108042548_108173932 | 108077495 | C | CGTCTGGG others(33): Show |
intron_variant | MODIFIER | HG02083.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0027 | 1 | 264 | 0.0038 | 40 | c.100 others(57): Show |
LEF1 | ENSG00000138795.10 | transcript | ENST00000265165.6 | protein_coding | 8/11 | chr4 | TogoVar | ||||||
LEF1_chr4_108042548_108173932 | 108077643 | C | CGGCTGCC others(33): Show |
intron_variant | MODIFIER | NA18906.hp1 | a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0178 | 1 | 264 | 0.0038 | 40 | c.100 others(57): Show |
LEF1 | ENSG00000138795.10 | transcript | ENST00000265165.6 | protein_coding | 8/11 | chr4 | TogoVar | ||||||
LEF1_chr4_108042548_108173932 | 108077653 | C | CCCGTCTG others(33): Show |
intron_variant | MODIFIER | HG01891.hp2 HG02896.hp1 HG02897.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0010 | a0001c0001t0003g0124a0001c0001t0010g0002a0001c0001t0010g0003others(1): Show | 4 | 264 | 0.0152 | 40 | c.100 others(57): Show |
LEF1 | ENSG00000138795.10 | transcript | ENST00000265165.6 | protein_coding | 8/11 | chr4 | TogoVar | ||||||
LEMD3_chr12_65164583_65253355 | 65180989 | A | AACACACA others(33): Show |
intron_variant | MODIFIER | HG03486.hp1 | a0001 | a0001c0001 | a0001c0001t0005 | a0001c0001t0005g0034 | 1 | 398 | 0.0025 | 40 | c.152 others(59): Show |
LEMD3 | ENSG00000174106.3 | transcript | ENST00000308330.3 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
LEPROT_chr1_65415668_65441007 | 65417065 | C | CATATATA others(33): Show |
upstream_gene_variant | MODIFIER | HG00408.hp1 HG01106.hp1 HG01192.hp1 others(14): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(6): Show | a0001c0001t0001g0001a0001c0001t0001g0006a0001c0001t0001g0070others(11): Show | 17 | 402 | 0.0423 | 40 | c.-36 others(51): Show |
LEPROT | ENSG00000213625.9 | transcript | ENST00000371065.9 | protein_coding | 3602 | chr1 | TogoVar | ||||||
LEPR_chr1_65415668_65646559 | 65417065 | C | CATATATA others(33): Show |
upstream_gene_variant | MODIFIER | HG01106.hp1 HG01192.hp1 HG01952.hp2 others(5): Show |
a0001a0002a0003 | a0001c0001a0001c0009a0002c0002others(1): Show | a0001c0001t0003a0001c0009t0010a0002c0002t0001others(1): Show | a0001c0001t0003g0016a0001c0001t0003g0059a0001c0001t0003g0071others(5): Show | 8 | 216 | 0.0370 | 40 | c.-37 others(51): Show |
LEPR | ENSG00000116678.20 | transcript | ENST00000349533.11 | protein_coding | 3602 | chr1 | TogoVar | ||||||
LEPR_chr1_65415668_65646559 | 65488159 | C | CCTTCCTT others(33): Show |
intron_variant | MODIFIER | HG03225.hp2 | a0001 | a0001c0008 | a0001c0008t0008 | a0001c0008t0008g0189 | 1 | 216 | 0.0046 | 40 | c.-21 others(59): Show |
LEPR | ENSG00000116678.20 | transcript | ENST00000349533.11 | protein_coding | 2/19 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
LEUTX_chr19_39773854_39791291 | 39789487 | G | GATATATA others(33): Show |
downstream_gene_variant | MODIFIER | HG00639.hp1 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0009 | 1 | 476 | 0.0021 | 40 | c.*33 others(51): Show |
LEUTX | ENSG00000213921.8 | transcript | ENST00000638280.2 | protein_coding | 3197 | chr19 | TogoVar | ||||||
LEXM_chr1_54801063_54847252 | 54819812 | T | TTTTCTTT others(33): Show |
intron_variant | MODIFIER | HG02071.hp2 HG02717.hp2 HG02970.hp1 others(4): Show |
a0001a0002 | a0001c0003a0001c0004a0002c0005 | a0001c0003t0003a0001c0004t0003a0002c0005t0004 | a0001c0003t0003g0229a0001c0004t0003g0193a0002c0005t0004g0012others(2): Show | 7 | 382 | 0.0183 | 40 | c.118 others(59): Show |
LEXM | ENSG00000162398.12 | transcript | ENST00000371273.4 | protein_coding | 9/9 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
LHFPL6_chr13_39337892_39608193 | 39352909 | A | ATGTATAT others(33): Show |
intron_variant | MODIFIER | HG00140.hp1 HG00438.hp1 HG00544.hp1 others(86): Show |
a0001 | a0001c0001a0001c0002a0001c0006 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(16): Show | a0001c0001t0001g0023a0001c0001t0001g0054a0001c0001t0001g0066others(86): Show | 89 | 242 | 0.3678 | 40 | c.485 others(57): Show |
LHFPL6 | ENSG00000183722.9 | transcript | ENST00000379589.4 | protein_coding | 3/3 | chr13 | TogoVar | ||||||
LHFPL6_chr13_39337892_39608193 | 39369572 | T | TTCCTTCC others(33): Show |
intron_variant | MODIFIER | HG02280.hp2 | a0001 | a0001c0001 | a0001c0001t0005 | a0001c0001t0005g0024 | 1 | 242 | 0.0041 | 40 | c.484 others(57): Show |
LHFPL6 | ENSG00000183722.9 | transcript | ENST00000379589.4 | protein_coding | 3/3 | chr13 | TogoVar | ||||||
LHFPL6_chr13_39337892_39608193 | 39369597 | T | TCCCTCCC others(33): Show |
intron_variant | MODIFIER | HG03471.hp1 HG03579.hp1 |
a0001 | a0001c0001 | a0001c0001t0005a0001c0001t0020 | a0001c0001t0005g0035a0001c0001t0020g0003 | 2 | 242 | 0.0083 | 40 | c.484 others(57): Show |
LHFPL6 | ENSG00000183722.9 | transcript | ENST00000379589.4 | protein_coding | 3/3 | chr13 | TogoVar | ||||||
LHFPL6_chr13_39337892_39608193 | 39369597 | T | TCCTTCCC others(33): Show |
intron_variant | MODIFIER | HG00408.hp2 HG01934.hp1 HG02922.hp1 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0006others(2): Show | a0001c0001t0001g0023a0001c0001t0001g0140a0001c0001t0002g0193others(3): Show | 6 | 242 | 0.0248 | 40 | c.484 others(57): Show |
LHFPL6 | ENSG00000183722.9 | transcript | ENST00000379589.4 | protein_coding | 3/3 | chr13 | TogoVar | ||||||
LHFPL7_chr22_24930098_24951694 | 24940632 | C | CCCTTCCT others(33): Show |
intron_variant | MODIFIER | HG02647.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0246 | 1 | 420 | 0.0024 | 40 | c.-17 others(57): Show |
LHFPL7 | ENSG00000206069.7 | transcript | ENST00000640159.2 | protein_coding | 1/3 | chr22 | TogoVar | ||||||
LHFPL7_chr22_24930098_24951694 | 24940636 | C | CCCTTCCT others(33): Show |
intron_variant | MODIFIER | HG03041.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0196 | 1 | 420 | 0.0024 | 40 | c.-17 others(57): Show |
LHFPL7 | ENSG00000206069.7 | transcript | ENST00000640159.2 | protein_coding | 1/3 | chr22 | TogoVar | ||||||
LHX5_chr12_113457033_113476871 | 113461038 | C | CTCTTTCT others(33): Show |
downstream_gene_variant | MODIFIER | NA18966.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0003 | 1 | 396 | 0.0025 | 40 | c.*21 others(51): Show |
LHX5 | ENSG00000089116.4 | transcript | ENST00000261731.4 | protein_coding | 994 | chr12 | TogoVar | ||||||
LIAS_chr4_39454056_39484506 | 39480870 | G | GGAGTTTC others(33): Show |
downstream_gene_variant | MODIFIER | HG02273.hp2 | a0001 | a0001c0001 | a0001c0001t0017 | a0001c0001t0017g0066 | 1 | 424 | 0.0024 | 40 | c.*37 others(51): Show |
LIAS | ENSG00000121897.15 | transcript | ENST00000640888.2 | protein_coding | 1365 | chr4 | TogoVar | ||||||
LILRA5_chr19_54302070_54318166 | 54304741 | T | TTTTCTTT others(33): Show |
downstream_gene_variant | MODIFIER | NA19065.hp1 | a0001 | a0001c0001 | a0001c0001t0006 | a0001c0001t0006g0164 | 1 | 409 | 0.0024 | 40 | c.*26 others(51): Show |
LILRA5 | ENSG00000187116.14 | transcript | ENST00000432233.8 | protein_coding | 2328 | chr19 | TogoVar | ||||||
LIMD1_chr3_45589751_45691341 | 45594778 | A | AACACACA others(33): Show |
5_prime_UTR_variant | MODIFIER | HG01070.hp2 | a0001 | a0001c0002 | a0001c0002t0206 | a0001c0002t0206g0310 | 1 | 358 | 0.0028 | 40 | c.-75 others(47): Show |
LIMD1 | ENSG00000144791.10 | transcript | ENST00000273317.5 | protein_coding | 1/8 | 35 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||
LIMD1_chr3_45589751_45691341 | 45686663 | A | ATATATAT others(33): Show |
downstream_gene_variant | MODIFIER | HG01952.hp2 | a0001 | a0001c0001 | a0001c0001t0016 | a0001c0001t0016g0001 | 1 | 358 | 0.0028 | 40 | c.*96 others(51): Show |
LIMD1 | ENSG00000144791.10 | transcript | ENST00000273317.5 | protein_coding | 323 | chr3 | TogoVar | ||||||
LIMD1_chr3_45589751_45691341 | 45686663 | A | ATATATAT others(33): Show |
downstream_gene_variant | MODIFIER | NA18952.hp2 | a0001 | a0001c0001 | a0001c0001t0152 | a0001c0001t0152g0049 | 1 | 358 | 0.0028 | 40 | c.*96 others(51): Show |
LIMD1 | ENSG00000144791.10 | transcript | ENST00000273317.5 | protein_coding | 323 | chr3 | TogoVar | ||||||
LIMS1_chr2_108529470_108692246 | 108569764 | C | CTTTTTTT others(33): Show |
intron_variant | MODIFIER | NA18994.hp2 | a0001 | a0001c0002 | a0001c0002t0004 | a0001c0002t0004g0241 | 1 | 246 | 0.0041 | 40 | c.32+ others(57): Show |
LIMS1 | ENSG00000169756.17 | transcript | ENST00000544547.6 | protein_coding | 1/9 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
LIMS1_chr2_108529470_108692246 | 108673263 | C | CACCCTCC others(33): Show |
intron_variant | MODIFIER | NA18977.hp2 | a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0051 | 1 | 246 | 0.0041 | 40 | c.530 others(55): Show |
LIMS1 | ENSG00000169756.17 | transcript | ENST00000544547.6 | protein_coding | 5/9 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
LIN54_chr4_82919603_83015823 | 82941149 | G | GATATATA others(33): Show |
intron_variant | MODIFIER | HG01891.hp2 | a0001 | a0001c0001 | a0001c0001t0007 | a0001c0001t0007g0116 | 1 | 304 | 0.0033 | 40 | c.116 others(59): Show |
LIN54 | ENSG00000189308.11 | transcript | ENST00000340417.8 | protein_coding | 5/12 | chr4 | TogoVar | ||||||
LIN54_chr4_82919603_83015823 | 83001889 | A | AGAAAGAA others(33): Show |
intron_variant | MODIFIER | HG02895.hp1 HG02897.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 | 2 | 304 | 0.0066 | 40 | c.-33 others(57): Show |
LIN54 | ENSG00000189308.11 | transcript | ENST00000340417.8 | protein_coding | 1/12 | chr4 | TogoVar | ||||||
LINGO2_chr9_27932617_29218601 | 28433949 | C | CTCTCTCT others(33): Show |
intron_variant | MODIFIER | HG02809.hp1 | a0001 | a0001c0003 | a0001c0003t0009 | a0001c0003t0009g0036 | 1 | 62 | 0.0161 | 40 | c.-22 others(61): Show |
LINGO2 | ENSG00000174482.11 | transcript | ENST00000698399.1 | protein_coding | 4/6 | chr9 | TogoVar | ||||||
LINGO2_chr9_27932617_29218601 | 28714188 | T | TATATATA others(33): Show |
intron_variant | MODIFIER | NA18990.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0043 | 1 | 62 | 0.0161 | 40 | c.-39 others(61): Show |
LINGO2 | ENSG00000174482.11 | transcript | ENST00000698399.1 | protein_coding | 2/6 | chr9 | TogoVar | ||||||
LINGO2_chr9_27932617_29218601 | 28837649 | A | AATATATA others(33): Show |
intron_variant | MODIFIER | HG00438.hp2 HG02895.hp2 HG02897.hp1 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0006 | a0001c0001t0001g0016a0001c0001t0006g0003a0001c0001t0006g0004 | 3 | 62 | 0.0484 | 40 | c.-39 others(63): Show |
LINGO2 | ENSG00000174482.11 | transcript | ENST00000698399.1 | protein_coding | 2/6 | chr9 | TogoVar | ||||||
LIPG_chr18_49557057_49604185 | 49558431 | T | TTCTCTCT others(33): Show |
upstream_gene_variant | MODIFIER | HG00735.hp1 HG01175.hp2 |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0142a0002c0002t0072 | a0001c0001t0142g0159a0002c0002t0072g0363 | 2 | 384 | 0.0052 | 40 | c.-38 others(51): Show |
LIPG | ENSG00000101670.12 | transcript | ENST00000261292.9 | protein_coding | 3625 | chr18 | TogoVar | ||||||
LIPG_chr18_49557057_49604185 | 49579001 | G | GGGGAGAC others(33): Show |
intron_variant | MODIFIER | HG03688.hp2 | a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0041 | 1 | 384 | 0.0026 | 40 | c.794 others(57): Show |
LIPG | ENSG00000101670.12 | transcript | ENST00000261292.9 | protein_coding | 5/9 | INFO_REALIGN_3_PRIME | chr18 | TogoVar | |||||
LIPG_chr18_49557057_49604185 | 49579097 | A | AGGGAGAG others(33): Show |
intron_variant | MODIFIER | NA19082.hp1 | a0001 | a0001c0001 | a0001c0001t0043 | a0001c0001t0043g0114 | 1 | 384 | 0.0026 | 40 | c.794 others(57): Show |
LIPG | ENSG00000101670.12 | transcript | ENST00000261292.9 | protein_coding | 5/9 | INFO_REALIGN_3_PRIME | chr18 | TogoVar | |||||
LIPG_chr18_49557057_49604185 | 49579764 | C | CTTTCCTT others(33): Show |
intron_variant | MODIFIER | HG00741.hp1 | a0001 | a0001c0001 | a0001c0001t0052 | a0001c0001t0052g0374 | 1 | 384 | 0.0026 | 40 | c.794 others(57): Show |
LIPG | ENSG00000101670.12 | transcript | ENST00000261292.9 | protein_coding | 5/9 | INFO_REALIGN_3_PRIME | chr18 | TogoVar | |||||
LIPG_chr18_49557057_49604185 | 49579764 | C | CTTTCCTT others(33): Show |
intron_variant | MODIFIER | HG03516.hp2 | a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0016 | 1 | 384 | 0.0026 | 40 | c.794 others(57): Show |
LIPG | ENSG00000101670.12 | transcript | ENST00000261292.9 | protein_coding | 5/9 | INFO_REALIGN_3_PRIME | chr18 | TogoVar |