Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
OCEL1_chr19_17221226_17234219	17225459	C C	CTCTCTCT others(35): Show CTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03516.hp2 HG03516.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0002 a0002c0003t0001g0002	1	444	0.0023	42	c.-78 others(51): Show c.-789_-788insTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATA TATATA	OCEL1	ENSG00000099330.9	transcript	ENST00000215061.9	protein_coding		766		chr19	TogoVar
OCEL1_chr19_17221226_17234219	17225459	C C	CTCTCTCT others(35): Show CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03139.hp1 NA19007.hp1 NA19240.hp1 HG03139.hp1 NA19007.hp1 NA19240.hp1	a0001 a0002 a0001 a0002	a0001c0011 a0002c0003 a0001c0011 a0002c0003	a0001c0011t0001 a0002c0003t0001 a0001c0011t0001 a0002c0003t0001	a0001c0011t0001g0002 a0002c0003t0001g0002 a0001c0011t0001g0002 a0002c0003t0001g0002	3	444	0.0068	42	c.-78 others(51): Show c.-789_-788insTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATA TATATA	OCEL1	ENSG00000099330.9	transcript	ENST00000215061.9	protein_coding		766		chr19	TogoVar
OCEL1_chr19_17221226_17234219	17225459	C C	CTCTCTCT others(35): Show CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01255.hp2 NA18950.hp2 NA18974.hp1 HG01255.hp2 NA18950.hp2 NA18974.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0002 a0002c0003t0001g0002	3	444	0.0068	42	c.-78 others(51): Show c.-789_-788insTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATA TATATA	OCEL1	ENSG00000099330.9	transcript	ENST00000215061.9	protein_coding		766		chr19	TogoVar
OCEL1_chr19_17221226_17234219	17225459	C C	CTCTCTCT others(35): Show CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02559.hp1 HG03239.hp1 HG02559.hp1 HG03239.hp1	a0002 a0002	a0002c0003 a0002c0010 a0002c0003 a0002c0010	a0002c0003t0001 a0002c0010t0001 a0002c0003t0001 a0002c0010t0001	a0002c0003t0001g0002 a0002c0010t0001g0002 a0002c0003t0001g0002 a0002c0010t0001g0002	2	444	0.0045	42	c.-78 others(51): Show c.-789_-788insTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTA TATATA	OCEL1	ENSG00000099330.9	transcript	ENST00000215061.9	protein_coding		766		chr19	TogoVar
OCEL1_chr19_17221226_17234219	17225459	C C	CTCTCTCT others(35): Show CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02040.hp1 HG02040.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0002 a0002c0003t0001g0002	1	444	0.0023	42	c.-78 others(51): Show c.-789_-788insTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC TATATA	OCEL1	ENSG00000099330.9	transcript	ENST00000215061.9	protein_coding		766		chr19	TogoVar
OCEL1_chr19_17221226_17234219	17225459	C C	CTCTCTCT others(35): Show CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00438.hp2 NA18964.hp1 HG00438.hp2 NA18964.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0002 a0002c0003t0001g0002	2	444	0.0045	42	c.-78 others(51): Show c.-789_-788insTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC TCTATA	OCEL1	ENSG00000099330.9	transcript	ENST00000215061.9	protein_coding		766		chr19	TogoVar
ODF2L_chr1_86341837_86401323	86400628	A A	AATATATA others(35): Show AATATATATATATATATATATATATATATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02074.hp2 HG02074.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0013 a0001c0001t0002g0013	1	406	0.0025	42	c.-46 others(53): Show c.-4656_-4655insATATATATATATATATATATATATATATATATAT ATATATAT	ODF2L	ENSG00000122417.16	transcript	ENST00000460698.7	protein_coding		4306		chr1	TogoVar
ODF2_chr9_128451006_128506292	128470018	A A	AAAAAAAA others(35): Show AAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG02897.hp1 HG02622.hp1 HG02897.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0096 a0001c0001t0002g0099 a0001c0001t0002g0096 a0001c0001t0002g0099	2	346	0.0058	42	c.669 others(57): Show c.669+666_669+667insAAAAAAAAAAAAAAAAAAAAAAAAAAAATA TATATATATATA	ODF2	ENSG00000136811.17	transcript	ENST00000351030.8	protein_coding	5/20		INFO_REALIGN_3_PRIME	chr9	TogoVar
OLFM1_chr9_135082668_135126180	135124684	G G	GAAGAAAG others(35): Show GAAGAAAGAAGAAAGAAAGAAAGAAGAAAGAAAGAAAGAAAGA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02559.hp1 HG03486.hp1 HG02559.hp1 HG03486.hp1	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0001 a0001c0005t0004 a0001c0001t0001 a0001c0005t0004	a0001c0001t0001g0146 a0001c0005t0004g0136 a0001c0001t0001g0146 a0001c0005t0004g0136	2	360	0.0056	42	c.45 others(53): Show c.4506_*4507insAAGAAAGAAGAAAGAAAGAAAGAAGAAAGAAAGA AAGAAAGA	OLFM1	ENSG00000130558.20	transcript	ENST00000371793.8	protein_coding		3505		chr9	TogoVar
OLFM3_chr1_101797560_102001926	101991016	A A	AAAAAAAA others(35): Show AAAAAAAAAAAAAAAAAAAATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA20905.hp2 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0179 a0001c0001t0001g0179	1	306	0.0033	42	c.69+ others(57): Show c.69+5731_69+5732insATATATATATATATATATATATATTTTTTT TTTTTTTTTTTT	OLFM3	ENSG00000118733.17	transcript	ENST00000370103.9	protein_coding	1/5			chr1	TogoVar
OMA1_chr1_58475719_58551726	58518196	A A	AGGAGAGG others(35): Show AGGAGAGGGGAGAGGGGAGAGGGGAGAGGGGAGAGGGGAGACG	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG01515.hp2 HG01517.hp2 others(1): Show HG00741.hp2 HG01515.hp2 HG01517.hp2 HG03540.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0109 a0001c0002t0002g0111 a0001c0002t0002g0112 others(1): Show a0001c0002t0002g0109 a0001c0002t0002g0111 a0001c0002t0002g0112 a0001c0002t0002g0114	4	384	0.0104	42	c.121 others(61): Show c.1215+9064_1215+9065insCGTCTCCCCTCTCCCCTCTCCCCTCT CCCCTCTCCCCTCTCC	OMA1	ENSG00000162600.12	transcript	ENST00000371226.8	protein_coding	7/8			chr1	TogoVar
OMA1_chr1_58475719_58551726	58518196	A A	AGGAGAGG others(35): Show AGGAGAGGGGAGAGGGGAGAGGGGAGAGGGGAGAGGGGAGAGG	intron_variant intron_variant	MODIFIER	NA18945.hp1 NA18945.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0159 a0001c0001t0001g0159	1	384	0.0026	42	c.121 others(61): Show c.1215+9023_1215+9064dupCCTCTCCCCTCTCCCCTCTCCCCTCT CCCCTCTCCCCTCTCC	OMA1	ENSG00000162600.12	transcript	ENST00000371226.8	protein_coding	7/8			chr1	TogoVar
OMA1_chr1_58475719_58551726	58518202	G G	GGGGAGAG others(35): Show GGGGAGAGGGGAGAGGGGAGAGGGGAGAGGGGAGACGGGAGAC	intron_variant intron_variant	MODIFIER	HG01256.hp2 HG02145.hp2 HG02738.hp1 others(1): Show HG01256.hp2 HG02145.hp2 HG02738.hp1 HG03704.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0097 a0001c0002t0002g0099 a0001c0002t0002g0100 others(1): Show a0001c0002t0002g0097 a0001c0002t0002g0099 a0001c0002t0002g0100 a0001c0002t0002g0102	4	384	0.0104	42	c.121 others(61): Show c.1215+9058_1215+9059insGTCTCCCGTCTCCCCTCTCCCCTCTC CCCTCTCCCCTCTCCC	OMA1	ENSG00000162600.12	transcript	ENST00000371226.8	protein_coding	7/8			chr1	TogoVar
OMA1_chr1_58475719_58551726	58518209	G G	GGGGAGAG others(35): Show GGGGAGAGGGGAGAGGGGAGAGGGGAGACGGGAGAGGGGAGAC	intron_variant intron_variant	MODIFIER	HG00597.hp1 HG00597.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0152 a0001c0001t0001g0152	1	384	0.0026	42	c.121 others(61): Show c.1215+9051_1215+9052insGTCTCCCCTCTCCCGTCTCCCCTCTC CCCTCTCCCCTCTCCC	OMA1	ENSG00000162600.12	transcript	ENST00000371226.8	protein_coding	7/8			chr1	TogoVar
OMA1_chr1_58475719_58551726	58518216	G G	GGGGAGAG others(35): Show GGGGAGAGGGGAGACGGGAGAGGGGAGAGGGGAGAGGGGAGAC	intron_variant intron_variant	MODIFIER	NA18961.hp1 NA18961.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0296 a0001c0001t0001g0296	1	384	0.0026	42	c.121 others(61): Show c.1215+9044_1215+9045insGTCTCCCCTCTCCCCTCTCCCCTCTC CCGTCTCCCCTCTCCC	OMA1	ENSG00000162600.12	transcript	ENST00000371226.8	protein_coding	7/8			chr1	TogoVar
OPA3_chr19_45541281_45589802	45572278	T T	TATATATA others(35): Show TATATATATCGATATATATCTCATATATATCGACATATATGAG	intron_variant intron_variant	MODIFIER	HG00408.hp1 NA18612.hp1 HG00408.hp1 NA18612.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0091 a0001c0001t0006g0092 a0001c0001t0006g0091 a0001c0001t0006g0092	2	398	0.0050	42	c.142 others(61): Show c.142+12303_142+12344dupCTCATATATGTCGATATATATGAGAT ATATATCGATATATAT	OPA3	ENSG00000125741.6	transcript	ENST00000263275.5	protein_coding	1/1			chr19	TogoVar
OPCML_chr11_132409981_133537501	133140994	A A	AGACGAAG others(35): Show AGACGAAGACGAAGACGAAGAAGACGAAGACGAAGACGAAGAC	intron_variant intron_variant	MODIFIER	HG01192.hp1 HG01192.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0032 a0001c0001t0002g0032	1	68	0.0147	42	c.62- others(61): Show c.62-197985_62-197984insGTCTTCGTCTTCGTCTTCGTCTTCTT CGTCTTCGTCTTCGTC	OPCML	ENSG00000183715.15	transcript	ENST00000524381.6	protein_coding	1/7			chr11	TogoVar
OPHN1_chrX_68037344_68438495	68370011	A A	AATATATA others(35): Show AATATATATATATATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03209.hp1 HG03209.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0094 a0001c0001t0004g0094	1	155	0.0065	42	c.154 others(61): Show c.154+62855_154+62856insATATATATATATATATATATATATAT ATATATATATATATAT	OPHN1	ENSG00000079482.14	transcript	ENST00000355520.6	protein_coding	2/24			chrX	TogoVar
OPHN1_chrX_68037344_68438495	68426569	T T	TATATATA others(35): Show TATATATATATATATATATATATATATATATATATATATATAA	intron_variant intron_variant	MODIFIER	HG02630.hp1 HG02922.hp2 NA18948.hp1 HG02630.hp1 HG02922.hp2 NA18948.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0004 a0001c0001t0006 a0001c0001t0002 a0001c0001t0004 a0001c0001t0006	a0001c0001t0002g0083 a0001c0001t0004g0012 a0001c0001t0006g0013 a0001c0001t0002g0083 a0001c0001t0004g0012 a0001c0001t0006g0013	3	155	0.0194	42	c.154 others(59): Show c.154+6297_154+6298insTTATATATATATATATATATATATATAT ATATATATATATAT	OPHN1	ENSG00000079482.14	transcript	ENST00000355520.6	protein_coding	2/24			chrX	TogoVar
OPN4_chr10_86649547_86671460	86664853	A A	ACACAGTG others(35): Show ACACAGTGCCTGTCTTGGAGGGATAGGCTCAGGGGGGTTGCAG	intron_variant intron_variant	MODIFIER	NA19060.hp1 NA19060.hp1	a0011 a0011	a0011c0016 a0011c0016	a0011c0016t0001 a0011c0016t0001	a0011c0016t0001g0068 a0011c0016t0001g0068	1	450	0.0022	42	c.139 others(59): Show c.1399-820_1399-819insAGCACAGTGCCTGTCTTGGAGGGATAGG CTCAGGGGGGTTGC	OPN4	ENSG00000122375.13	transcript	ENST00000241891.10	protein_coding	9/9		INFO_REALIGN_3_PRIME	chr10	TogoVar
OPN5_chr6_47777032_47831381	47819336	A A	AATATATA others(35): Show AATATATATATATATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00597.hp1 HG02165.hp2 HG02698.hp1 others(3): Show HG00597.hp1 HG02165.hp2 HG02698.hp1 NA18970.hp1 NA18978.hp2 NA19065.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0011 a0001c0001t0001 a0001c0001t0004 a0001c0001t0011	a0001c0001t0001g0175 a0001c0001t0001g0215 a0001c0001t0001g0236 others(3): Show a0001c0001t0001g0175 a0001c0001t0001g0215 a0001c0001t0001g0236 a0001c0001t0001g0256 a0001c0001t0004g0203 a0001c0001t0011g0193	6	322	0.0186	42	c.105 others(61): Show c.1057-4630_1057-4629insTATATATATATATATATATATATATA TATATATATATATATA	OPN5	ENSG00000124818.16	transcript	ENST00000371211.7	protein_coding	6/6		INFO_REALIGN_3_PRIME	chr6	TogoVar
OPRL1_chr20_64075082_64105633	64105508	T T	TGGGGGTG others(35): Show TGGGGGTGGGCGTGATGATGGGGGTGATGGTGGGGGTGGTGGG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01884.hp1 HG01884.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0005 a0001c0001t0002g0005	1	66	0.0152	42	c.67 others(53): Show c.6709_*6710insGGGGGTGGGCGTGATGATGGGGGTGATGGTGGGG GTGGTGGG	OPRL1	ENSG00000125510.18	transcript	ENST00000336866.7	protein_coding		4876		chr20	TogoVar
OPRL1_chr20_64075082_64105633	64105551	G G	GGGGGTGG others(35): Show GGGGGTGGGCGTGATGGTGGGGGTGATGATGGGGGTGGTGGGC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02559.hp2 HG02622.hp1 HG03098.hp2 HG02559.hp2 HG02622.hp1 HG03098.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0014 a0001c0001t0015 a0001c0001t0002 a0001c0001t0014 a0001c0001t0015	a0001c0001t0002g0054 a0001c0001t0014g0033 a0001c0001t0015g0032 a0001c0001t0002g0054 a0001c0001t0014g0033 a0001c0001t0015g0032	3	66	0.0455	42	c.67 others(53): Show c.6752_*6753insGGGGTGGGCGTGATGGTGGGGGTGATGATGGGGG TGGTGGGC	OPRL1	ENSG00000125510.18	transcript	ENST00000336866.7	protein_coding		4919		chr20	TogoVar
OPRPN_chr4_70392940_70415195	70413194	T T	TGTGTGTA others(35): Show TGTGTGTATATATACACATATATATGTGTGTGTATATATACAC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01255.hp2 HG01255.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0039 a0001c0001t0001g0039	1	456	0.0022	42	c.31 others(53): Show c.3119_*3120insGTGTGTATATATACACATATATATGTGTGTGTAT ATATACAC	OPRPN	ENSG00000171199.11	transcript	ENST00000399575.7	protein_coding		3000		chr4	TogoVar
OR10G7_chr11_124031013_124046325	124033057	C C	CTCTCTCT others(35): Show CTCTCTCTCTATATATATATATATATATATATATATATATATA	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18961.hp1 NA18961.hp1	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0002 a0004c0004t0002	a0004c0004t0002g0004 a0004c0004t0002g0004	1	482	0.0021	42	c.50 others(53): Show c.5008_*5009insTATATATATATATATATATATATATATATATATA GAGAGAGA	OR10G7	ENSG00000182634.9	transcript	ENST00000641585.1	protein_coding		2955		chr11	TogoVar
OR10G7_chr11_124031013_124046325	124033057	C C	CTCTCTCT others(35): Show CTCTCTCTCTCTATATATATATATATATATATATATATATATA	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18988.hp1 NA18988.hp1	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0002 a0004c0004t0002	a0004c0004t0002g0004 a0004c0004t0002g0004	1	482	0.0021	42	c.50 others(53): Show c.5008_*5009insTATATATATATATATATATATATATATATATAGA GAGAGAGA	OR10G7	ENSG00000182634.9	transcript	ENST00000641585.1	protein_coding		2955		chr11	TogoVar
OR10G7_chr11_124031013_124046325	124033057	C C	CTCTCTCT others(35): Show CTCTCTCTCTCTCTATATATATATATATATATATATATATATA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03540.hp2 HG03540.hp2	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0009 a0004c0004t0009	a0004c0004t0009g0013 a0004c0004t0009g0013	1	482	0.0021	42	c.50 others(53): Show c.5008_*5009insTATATATATATATATATATATATATATATAGAGA GAGAGAGA	OR10G7	ENSG00000182634.9	transcript	ENST00000641585.1	protein_coding		2955		chr11	TogoVar
OR10G8_chr11_124021798_124035634	124033057	C C	CTCTCTCT others(35): Show CTCTCTCTCTATATATATATATATATATATATATATATATATA	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18961.hp1 NA18961.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0003 a0002c0002t0001g0003	1	446	0.0022	42	c.24 others(53): Show c.2499_*2500insTCTCTCTCTATATATATATATATATATATATATA TATATATA	OR10G8	ENSG00000234560.5	transcript	ENST00000641224.2	protein_coding		2424		chr11	TogoVar
OR10G8_chr11_124021798_124035634	124033057	C C	CTCTCTCT others(35): Show CTCTCTCTCTCTATATATATATATATATATATATATATATATA	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18988.hp1 NA18988.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0003 a0002c0002t0001g0003	1	446	0.0022	42	c.24 others(53): Show c.2499_*2500insTCTCTCTCTCTATATATATATATATATATATATA TATATATA	OR10G8	ENSG00000234560.5	transcript	ENST00000641224.2	protein_coding		2424		chr11	TogoVar
OR10G8_chr11_124021798_124035634	124033057	C C	CTCTCTCT others(35): Show CTCTCTCTCTCTCTATATATATATATATATATATATATATATA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03540.hp2 HG03540.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0003 a0002c0002t0001g0003	1	446	0.0022	42	c.24 others(53): Show c.2499_*2500insTCTCTCTCTCTCTATATATATATATATATATATA TATATATA	OR10G8	ENSG00000234560.5	transcript	ENST00000641224.2	protein_coding		2424		chr11	TogoVar
OR10H1_chr19_15799549_15820664	15801375	A A	AATATATA others(35): Show AATATATATATATATATATATATATATATATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00323.hp2 HG02027.hp2 HG02071.hp1 others(9): Show HG00323.hp2 HG02027.hp2 HG02071.hp1 HG02602.hp2 HG02895.hp1 HG02897.hp2 HG04115.hp1 HG04115.hp2 NA18940.hp2 NA18981.hp2 NA18999.hp2 NA19063.hp2	a0001 a0010 a0001 a0010	a0001c0001 a0001c0002 a0010c0019 a0001c0001 a0001c0002 a0010c0019	a0001c0001t0001 a0001c0002t0001 a0001c0002t0019 others(1): Show a0001c0001t0001 a0001c0002t0001 a0001c0002t0019 a0010c0019t0016	a0001c0001t0001g0059 a0001c0002t0001g0001 a0001c0002t0001g0007 others(6): Show a0001c0001t0001g0059 a0001c0002t0001g0001 a0001c0002t0001g0007 a0001c0002t0001g0037 a0001c0002t0001g0064 a0001c0002t0001g0080 a0001c0002t0001g0093 a0001c0002t0019g0031 a0010c0019t0016g0087	12	398	0.0302	42	c.57 others(53): Show c.5705_*5706insATATATATATATATATATATATATATATATATAT ATATATAT	OR10H1	ENSG00000186723.4	transcript	ENST00000641419.1	protein_coding		3173		chr19	TogoVar
OR10H5_chr19_15782661_15805357	15801375	A A	AATATATA others(35): Show AATATATATATATATATATATATATATATATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00323.hp1 HG02071.hp1 HG02895.hp1 others(5): Show HG00323.hp1 HG02071.hp1 HG02895.hp1 HG02897.hp1 NA18940.hp1 NA18981.hp2 NA18999.hp2 NA19063.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0013 a0001c0002t0028 others(3): Show a0001c0002t0003 a0001c0002t0013 a0001c0002t0028 a0001c0002t0043 a0001c0002t0086 a0001c0002t0103	a0001c0002t0003g0002 a0001c0002t0013g0002 a0001c0002t0028g0002 others(3): Show a0001c0002t0003g0002 a0001c0002t0013g0002 a0001c0002t0028g0002 a0001c0002t0043g0002 a0001c0002t0086g0002 a0001c0002t0103g0002	8	396	0.0202	42	c.63 others(53): Show c.6379_*6380insATATATATATATATATATATATATATATATATAT ATATATAT	OR10H5	ENSG00000172519.10	transcript	ENST00000642092.2	protein_coding		1019		chr19	TogoVar
OR11H4_chr14_20234286_20249349	20237522	A A	ATATATAT others(35): Show ATATATATAAAATATATATATTATAAATATATATATAATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01891.hp2 HG06807.hp1 HG01891.hp2 HG06807.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0155 a0001c0001t0001g0156 a0001c0001t0001g0155 a0001c0001t0001g0156	2	439	0.0046	42	c.-18 others(53): Show c.-1821_-1820insTATATATAAAATATATATATTATAAATATATATA TAATATAT	OR11H4	ENSG00000176198.4	transcript	ENST00000641082.1	protein_coding		1763		chr14	TogoVar
OR11H4_chr14_20234286_20249349	20237527	T T	TATAAAAT others(35): Show TATAAAATATATATATTATAAAATATATATAATATATTATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02970.hp2 HG02970.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0124 a0001c0001t0002g0124	1	439	0.0023	42	c.-18 others(53): Show c.-1816_-1815insATAAAATATATATATTATAAAATATATATAATAT ATTATATA	OR11H4	ENSG00000176198.4	transcript	ENST00000641082.1	protein_coding		1758		chr14	TogoVar
OR11H4_chr14_20234286_20249349	20237775	A A	ATATATAT others(35): Show ATATATATAATATAGAATATATTATATATAATATAGAATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00408.hp2 HG02015.hp1 HG02027.hp2 others(2): Show HG00408.hp2 HG02015.hp1 HG02027.hp2 HG04228.hp1 NA18953.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0001 a0001c0001t0001g0073 a0001c0001t0001g0147 others(1): Show a0001c0001t0001g0001 a0001c0001t0001g0073 a0001c0001t0001g0147 a0001c0001t0002g0191	5	439	0.0114	42	c.-15 others(53): Show c.-1568_-1567insTATATATAATATAGAATATATTATATATAATATA GAATATAT	OR11H4	ENSG00000176198.4	transcript	ENST00000641082.1	protein_coding		1510		chr14	TogoVar
OR11H4_chr14_20234286_20249349	20237872	A A	AGAATATA others(35): Show AGAATATATTATATATAATATGGAATATATTATATATAATATG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03516.hp1 HG03516.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0034 a0001c0001t0001g0034	1	439	0.0023	42	c.-14 others(53): Show c.-1471_-1470insGAATATATTATATATAATATGGAATATATTATAT ATAATATG	OR11H4	ENSG00000176198.4	transcript	ENST00000641082.1	protein_coding		1413		chr14	TogoVar
OR13D1_chr9_104689518_104700462	104696103	A A	AAGAAAGA others(35): Show AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18992.hp2 NA18992.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0000 a0001c0001t0000	a0001c0001t0000g0000 a0001c0001t0000g0000	1	396	0.0025	42	c.64 others(51): Show c.641_*642insAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA AGAAAG	OR13D1	ENSG00000179055.8	transcript	ENST00000641530.1	protein_coding		642		chr9	TogoVar
OR13D1_chr9_104689518_104700462	104696107	A A	AAGAAAGA others(35): Show AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19066.hp1 NA19066.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0000 a0002c0002t0000	a0002c0002t0000g0000 a0002c0002t0000g0000	1	396	0.0025	42	c.64 others(51): Show c.645_*646insAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA AGAAAG	OR13D1	ENSG00000179055.8	transcript	ENST00000641530.1	protein_coding		646		chr9	TogoVar
OR1E1_chr17_3392104_3403410	3399273	A A	AAAGGAAA others(35): Show AAAGGAAAGGAAAGGAAAGGAAAGGAAGGAAAGGAAAGAAAGG	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18955.hp2 NA18955.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0000 a0001c0003t0001g0000	1	380	0.0026	42	c.-86 others(51): Show c.-864_-863insCCTTTCTTTCCTTTCCTTCCTTTCCTTTCCTTTCCT TTCCTT	OR1E1	ENSG00000180016.2	transcript	ENST00000322608.2	protein_coding		864		chr17	TogoVar
OR1F1_chr16_3183204_3211556	3188050	G G	GAAAAGAA others(35): Show GAAAAGAAAAGAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01978.hp2 HG02723.hp1 HG03540.hp2 others(2): Show HG01978.hp2 HG02723.hp1 HG03540.hp2 NA18943.hp2 NA18963.hp2	a0001 a0004 a0008 a0001 a0004 a0008	a0001c0001 a0004c0004 a0008c0011 a0001c0001 a0004c0004 a0008c0011	a0001c0001t0002 a0001c0001t0003 a0004c0004t0003 others(1): Show a0001c0001t0002 a0001c0001t0003 a0004c0004t0003 a0008c0011t0035	a0001c0001t0002g0278 a0001c0001t0003g0193 a0001c0001t0003g0225 others(2): Show a0001c0001t0002g0278 a0001c0001t0003g0193 a0001c0001t0003g0225 a0004c0004t0003g0260 a0008c0011t0035g0065	5	328	0.0152	42	c.-59 others(51): Show c.-592_-591insAAAAGAAAAGAAAAGAAAAAAAAAAAAAAAAAAAAA AAAAAA	OR1F1	ENSG00000168124.3	transcript	ENST00000304646.3	protein_coding		153		chr16	TogoVar
OR1F1_chr16_3183204_3211556	3188050	G G	GAAAAGAA others(35): Show GAAAAGAAAAGAAAAGAAAAAAAAAAAAAAAAAGAAAAAAAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01891.hp1 HG01891.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0212 a0001c0001t0002g0212	1	328	0.0031	42	c.-59 others(51): Show c.-592_-591insAAAAGAAAAGAAAAGAAAAAAAAAAAAAAAAAGAAA AAAAAA	OR1F1	ENSG00000168124.3	transcript	ENST00000304646.3	protein_coding		153		chr16	TogoVar
OR1F1_chr16_3183204_3211556	3188052	A A	AAAGAAAA others(35): Show AAAGAAAAGAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00735.hp1 HG00741.hp2 HG02145.hp1 HG00735.hp1 HG00741.hp2 HG02145.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0002 a0001c0001t0003	a0001c0001t0002g0234 a0001c0001t0002g0274 a0001c0001t0003g0271 a0001c0001t0002g0234 a0001c0001t0002g0274 a0001c0001t0003g0271	3	328	0.0092	42	c.-59 others(51): Show c.-590_-589insAAGAAAAGAAAAGAAAAAAAAAAAAAAAAAAAAAAA AAAAAG	OR1F1	ENSG00000168124.3	transcript	ENST00000304646.3	protein_coding		151		chr16	TogoVar
OR1L3_chr9_122670130_122681104	122670871	A A	AGGAAGGA others(35): Show AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGGGAG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02809.hp2 HG02809.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0000 a0001c0001t0000	a0001c0001t0000g0000 a0001c0001t0000g0000	1	380	0.0026	42	c.-42 others(53): Show c.-4259_-4258insGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG AAAGGGAG	OR1L3	ENSG00000171481.5	transcript	ENST00000304820.5	protein_coding		4258		chr9	TogoVar
OR2B2_chr6_27906185_27917396	27915297	T T	TTATATAT others(35): Show TTATATATATATATATATATATATATATATATATATATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02615.hp2 HG02622.hp1 HG02717.hp2 others(12): Show HG02615.hp2 HG02622.hp1 HG02717.hp2 HG02723.hp1 HG02886.hp2 HG02970.hp2 HG03130.hp2 HG03486.hp2 NA18522.hp1 NA18939.hp1 NA18950.hp1 NA18952.hp2 NA18962.hp1 NA18972.hp2 NA19055.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	15	398	0.0377	42	c.-29 others(53): Show c.-2979_-2978insTATATATATATATATATATATATATATATATATA TATATATA	OR2B2	ENSG00000168131.4	transcript	ENST00000303324.4	protein_coding		2902		chr6	TogoVar
OR2B2_chr6_27906185_27917396	27915299	T T	TTATATAT others(35): Show TTATATATATATATATATATATATATATATATATATATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02004.hp2 NA18948.hp1 NA19081.hp1 others(2): Show HG02004.hp2 NA18948.hp1 NA19081.hp1 NA19091.hp1 NA20129.hp2	a0002 a0005 a0007 a0002 a0005 a0007	a0002c0002 a0005c0006 a0007c0012 a0002c0002 a0005c0006 a0007c0012	a0002c0002t0001 a0005c0006t0001 a0007c0012t0001 a0002c0002t0001 a0005c0006t0001 a0007c0012t0001	a0002c0002t0001g0000 a0005c0006t0001g0000 a0007c0012t0001g0000 a0002c0002t0001g0000 a0005c0006t0001g0000 a0007c0012t0001g0000	5	398	0.0126	42	c.-29 others(53): Show c.-2981_-2980insTATATATATATATATATATATATATATATATATA TATATATA	OR2B2	ENSG00000168131.4	transcript	ENST00000303324.4	protein_coding		2904		chr6	TogoVar
OR2F1_chr7_143949844_143969360	143950764	A A	ATTTATTT others(35): Show ATTTATTTATTTATTTATTTTTTTTTTTTTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03195.hp1 HG03195.hp1	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0021 a0003c0004t0021	a0003c0004t0021g0014 a0003c0004t0021g0014	1	402	0.0025	42	c.-45 others(53): Show c.-4519_-4518insTTTATTTATTTATTTATTTTTTTTTTTTTTTTTT TTTTTTTT	OR2F1	ENSG00000213215.5	transcript	ENST00000641412.1	protein_coding		4079		chr7	TogoVar
OR4D10_chr11_59468315_59484361	59483771	T T	TTATATAT others(35): Show TTATATATATATATATATATATATATATATATATATATATATA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02965.hp2 HG03041.hp1 NA19082.hp2 HG02965.hp2 HG03041.hp1 NA19082.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0001 a0001c0001t0002 a0001c0001t0003	a0001c0001t0001g0001 a0001c0001t0002g0036 a0001c0001t0003g0012 a0001c0001t0001g0001 a0001c0001t0002g0036 a0001c0001t0003g0012	3	430	0.0070	42	c.54 others(53): Show c.5406_*5407insTATATATATATATATATATATATATATATATATA TATATATA	OR4D10	ENSG00000254466.2	transcript	ENST00000530162.2	protein_coding		4411		chr11	TogoVar
OR4D10_chr11_59468315_59484361	59483788	T T	TATATATA others(35): Show TATATATATATATATATATATATATATATATATATATATATAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02970.hp1 HG02970.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0002 a0002c0002t0002g0002	1	430	0.0023	42	c.54 others(53): Show c.5423_*5424insATATATATATATATATATATATATATATATATAT ATATATAA	OR4D10	ENSG00000254466.2	transcript	ENST00000530162.2	protein_coding		4428		chr11	TogoVar
OR51I1_chr11_5435570_5446514	5435572	T T	TTTTATAA others(35): Show TTTTATAAATTTATAATTTATAAATAATTTATAAATAAAATAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00280.hp1 others(177): Show HG00099.hp1 HG00099.hp2 HG00280.hp1 HG00323.hp1 HG00609.hp1 HG00609.hp2 HG00639.hp2 HG00673.hp2 HG00733.hp1 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG01069.hp1 HG01069.hp2 HG01070.hp2 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01099.hp1 HG01109.hp2 HG01123.hp1 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01258.hp2 HG01346.hp2 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01515.hp2 HG01517.hp1 HG01517.hp2 HG01928.hp2 HG01934.hp2 HG01943.hp1 HG01952.hp2 HG01975.hp1 HG01978.hp1 HG01993.hp1 HG01993.hp2 HG02071.hp2 HG02074.hp2 HG02080.hp1 HG02083.hp1 HG02135.hp1 HG02145.hp2 HG02148.hp2 HG02155.hp2 HG02165.hp1 HG02257.hp2 HG02258.hp2 HG02273.hp2 HG02280.hp1 HG02293.hp1 HG02451.hp1 HG02451.hp2 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02602.hp2 HG02622.hp2 HG02683.hp2 HG02735.hp1 HG02738.hp1 HG02886.hp2 HG02922.hp1 HG02922.hp2 HG02970.hp2 HG03041.hp2 HG03139.hp2 HG03225.hp2 HG03239.hp1 HG03453.hp1 HG03490.hp1 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03540.hp2 HG03654.hp2 HG03669.hp2 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp2 HG03927.hp1 HG03942.hp2 HG04115.hp2 HG04184.hp2 HG04204.hp2 HG04228.hp1 HG06807.hp2 NA18522.hp1 NA18612.hp1 NA18747.hp2 NA18939.hp1 NA18939.hp2 NA18940.hp1 NA18940.hp2 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18945.hp2 NA18947.hp1 NA18948.hp2 NA18949.hp2 NA18950.hp1 NA18951.hp1 NA18951.hp2 NA18953.hp1 NA18956.hp1 NA18959.hp1 NA18959.hp2 NA18960.hp2 NA18962.hp1 NA18962.hp2 NA18964.hp1 NA18967.hp2 NA18970.hp1 NA18970.hp2 NA18972.hp2 NA18974.hp1 NA18974.hp2 NA18975.hp2 NA18977.hp2 NA18978.hp1 NA18978.hp2 NA18982.hp2 NA18987.hp1 NA18989.hp2 NA18990.hp1 NA18990.hp2 NA18991.hp2 NA18992.hp1 NA18995.hp2 NA19004.hp2 NA19005.hp1 NA19006.hp1 NA19011.hp1 NA19030.hp1 NA19056.hp2 NA19058.hp2 NA19059.hp1 NA19060.hp2 NA19062.hp1 NA19063.hp1 NA19063.hp2 NA19065.hp1 NA19065.hp2 NA19072.hp2 NA19074.hp1 NA19074.hp2 NA19077.hp1 NA19078.hp1 NA19078.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19084.hp1 NA19085.hp2 NA19086.hp2 NA19091.hp2 NA20300.hp1 NA20752.hp1 NA20752.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1	a0001 a0002 a0004 others(4): Show a0001 a0002 a0004 a0010 a0011 a0014 a0015	a0001c0001 a0002c0002 a0004c0004 others(4): Show a0001c0001 a0002c0002 a0004c0004 a0010c0011 a0011c0013 a0014c0015 a0015c0017	a0001c0001t0000 a0002c0002t0000 a0004c0004t0000 others(4): Show a0001c0001t0000 a0002c0002t0000 a0004c0004t0000 a0010c0011t0000 a0011c0013t0000 a0014c0015t0000 a0015c0017t0000	a0001c0001t0000g0000 a0002c0002t0000g0000 a0004c0004t0000g0000 others(4): Show a0001c0001t0000g0000 a0002c0002t0000g0000 a0004c0004t0000g0000 a0010c0011t0000g0000 a0011c0013t0000g0000 a0014c0015t0000g0000 a0015c0017t0000g0000	180	472	0.3814	42	c.49 others(53): Show c.4997_*4998insTTATTTTATTTATAAATTATTTATAAATTATAAA TTTATAAA	OR51I1	ENSG00000167359.8	transcript	ENST00000380211.1	protein_coding		4997		chr11	TogoVar
OR7G3_chr19_9121012_9131950	9127084	T T	TTCTTTCT others(35): Show TTCTTTCTTTCTCTCTCTCCCTCTCTCTCTTTCTCTTTCTCTC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00733.hp1 HG00733.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0000 a0001c0001t0000	a0001c0001t0000g0000 a0001c0001t0000g0000	1	402	0.0025	42	c.-13 others(51): Show c.-135_-134insGAGAGAAAGAGAAAGAGAGAGAGGGAGAGAGAGAAA GAAAGA	OR7G3	ENSG00000170920.2	transcript	ENST00000305444.2	protein_coding		135		chr19	TogoVar

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Search Results (Total: 5093 hits)