Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	external
FAM227B_chr15_49321970_49625818	49489803	T T	TTTATATA others(36): Show TTTATATATATATATATATATATTTTTATATATATATATATTTA	intron_variant intron_variant	MODIFIER	HG02698.hp1 HG02698.hp1	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0014 a0003c0004t0014	a0003c0004t0014g0288 a0003c0004t0014g0288	1	294	0.0034	43	c.101 others(64): Show c.1012+18407_1012+18408insTAAATATATATATATATAAAAATA TATATATATATATATATAA		FAM227B	ENSG00000166262.16	transcript	ENST00000299338.11	protein_coding	11/15						chr15	TogoVar
FAM81B_chr5_95386366_95455441	95455405	T T	TGCACATT others(36): Show TGCACATTGTTGCCTTACAAAAGGGATCTCCAAAGTTTTTGTGA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01192.hp2 HG01192.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0145 a0001c0001t0001g0145	1	348	0.0029	43	c.51 others(54): Show c.5123_*5124insGCACATTGTTGCCTTACAAAAGGGATCTCCAAAG TTTTTGTGA		FAM81B	ENSG00000153347.10	transcript	ENST00000283357.10	protein_coding					4965		chr5	TogoVar
FAN1_chr15_30898915_30948108	30929752	A A	AAAATATA others(36): Show AAAATATATAATATATCATATATAATATATATAAAATATATAAT	intron_variant intron_variant	MODIFIER	HG01496.hp1 HG01496.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0191 a0001c0001t0006g0191	1	303	0.0033	43	c.278 others(60): Show c.2787+356_2787+357insAATATATAATATATCATATATAATATAT ATAAAATATATAATA		FAN1	ENSG00000198690.10	transcript	ENST00000362065.9	protein_coding	12/14					INFO_REALIGN_3_PRIME	chr15	TogoVar
FANCC_chr9_95094054_95322709	95271927	C C	CTTTTTTT others(36): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01516.hp2 HG01516.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0277 a0001c0001t0002g0277	1	278	0.0036	43	c.-78 others(62): Show c.-78-22559_-78-22558insAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAA		FANCC	ENSG00000158169.14	transcript	ENST00000289081.8	protein_coding	1/14						chr9	TogoVar
FBLN1_chr22_45497883_45606135	45568743	A A	AGTGCTCC others(36): Show AGTGCTCCTTCTGTAGGGCATGCTCCTTCTGTAGGGGAGTGCTC	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG02622.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0202 a0001c0002t0001g0202	1	346	0.0029	43	c.169 others(62): Show c.1698-5768_1698-5767insGTGCTCCTTCTGTAGGGCATGCTCCT TCTGTAGGGGAGTGCTC		FBLN1	ENSG00000077942.19	transcript	ENST00000327858.11	protein_coding	14/16						chr22	TogoVar
FBL_chr19_39829458_39851379	39850474	T T	TGTAATCC others(36): Show TGTAATCCCAACACTTTGGGAGGCCAAAGCAGGCGGATCACGAG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02523.hp2 HG02523.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	378	0.0027	43	c.-41 others(54): Show c.-4175_-4174insCTCGTGATCCGCCTGCTTTGGCCTCCCAAAGTGT TGGGATTAC		FBL	ENSG00000105202.9	transcript	ENST00000221801.8	protein_coding					4096		chr19	TogoVar
FBN1_chr15_48403313_48650709	48568049	G G	GAAAGAAA others(36): Show GAAAGAAAGAAAGAAGAAAGAAGAAAGAAAGAAAGAAAGAAAGA	intron_variant intron_variant	MODIFIER	HG02965.hp1 HG02965.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0007 a0001c0001t0011g0007	1	288	0.0035	43	c.538 others(62): Show c.538+28233_538+28234insTCTTTCTTTCTTTCTTTCTTTCTTCT TTCTTCTTTCTTTCTTT		FBN1	ENSG00000166147.15	transcript	ENST00000316623.10	protein_coding	6/65						chr15	TogoVar
FBN2_chr5_128252909_128543245	128539931	C C	CATATATC others(36): Show CATATATCATATATATCATATATATCATATATCATATATATCAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00558.hp2 HG03927.hp2 HG04199.hp2 others(2): Show HG00558.hp2 HG03927.hp2 HG04199.hp2 NA18988.hp1 NA19011.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0002 a0002c0002t0002 a0001c0001t0002 a0002c0002t0002	a0001c0001t0002g0072 a0001c0001t0002g0075 a0002c0002t0002g0067 others(2): Show a0001c0001t0002g0072 a0001c0001t0002g0075 a0002c0002t0002g0067 a0002c0002t0002g0068 a0002c0002t0002g0078	5	236	0.0212	43	c.-23 others(54): Show c.-2329_-2328insATGATATATATGATATATGATATATATGATATAT ATGATATAT		FBN2	ENSG00000138829.14	transcript	ENST00000262464.9	protein_coding					1687		chr5	TogoVar
FBN3_chr19_8060402_8154592	8130632	G G	GGAAGGAA others(36): Show GGAAGGAAGGAAGGAAGGAGGAAGGAAGGAAGGAAGGGAAAGGA	intron_variant intron_variant	MODIFIER	NA19074.hp1 NA19074.hp1	a0021 a0021	a0021c0015 a0021c0015	a0021c0015t0001 a0021c0015t0001	a0021c0015t0001g0112 a0021c0015t0001g0112	1	380	0.0026	43	c.204 others(60): Show c.2044+602_2044+603insTCCTTTCCCTTCCTTCCTTCCTTCCTCC TTCCTTCCTTCCTTC		FBN3	ENSG00000142449.13	transcript	ENST00000600128.6	protein_coding	16/63						chr19	TogoVar
FBN3_chr19_8060402_8154592	8130636	G G	GGAAGGAA others(36): Show GGAAGGAAGGAAGGAAGGAAAGGAAAGGAAAGGAAAGGAAAGGA	intron_variant intron_variant	MODIFIER	HG01358.hp2 HG02145.hp1 HG02647.hp2 HG01358.hp2 HG02145.hp1 HG02647.hp2	a0012 a0073 a0075 a0012 a0073 a0075	a0012c0114 a0073c0173 a0075c0161 a0012c0114 a0073c0173 a0075c0161	a0012c0114t0001 a0073c0173t0001 a0075c0161t0001 a0012c0114t0001 a0073c0173t0001 a0075c0161t0001	a0012c0114t0001g0338 a0073c0173t0001g0374 a0075c0161t0001g0151 a0012c0114t0001g0338 a0073c0173t0001g0374 a0075c0161t0001g0151	3	380	0.0079	43	c.204 others(60): Show c.2044+598_2044+599insTCCTTTCCTTTCCTTTCCTTTCCTTTCC TTCCTTCCTTCCTTC		FBN3	ENSG00000142449.13	transcript	ENST00000600128.6	protein_coding	16/63						chr19	TogoVar
FBN3_chr19_8060402_8154592	8130636	G G	GGAAGGAA others(36): Show GGAAGGAAGGAAGGAAGGAAGGGAAAGGAAAGGAAAGGAAAGGA	intron_variant intron_variant	MODIFIER	HG01934.hp2 HG01934.hp2	a0013 a0013	a0013c0010 a0013c0010	a0013c0010t0001 a0013c0010t0001	a0013c0010t0001g0081 a0013c0010t0001g0081	1	380	0.0026	43	c.204 others(60): Show c.2044+598_2044+599insTCCTTTCCTTTCCTTTCCTTTCCCTTCC TTCCTTCCTTCCTTC		FBN3	ENSG00000142449.13	transcript	ENST00000600128.6	protein_coding	16/63						chr19	TogoVar
FBN3_chr19_8060402_8154592	8130639	A A	AGGAAGGA others(36): Show AGGAAGGAAGGAAGGAAGGGAAAGGAAAGGAAAGGAAAGGAAAG	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG00408.hp1 HG02735.hp1 others(4): Show HG00323.hp2 HG00408.hp1 HG02735.hp1 HG03688.hp1 HG03831.hp2 NA18980.hp1 NA19063.hp2	a0001 a0004 a0007 others(2): Show a0001 a0004 a0007 a0009 a0083	a0001c0054 a0001c0171 a0004c0188 others(4): Show a0001c0054 a0001c0171 a0004c0188 a0007c0030 a0007c0050 a0009c0042 a0083c0154	a0001c0054t0002 a0001c0171t0002 a0004c0188t0001 others(4): Show a0001c0054t0002 a0001c0171t0002 a0004c0188t0001 a0007c0030t0001 a0007c0050t0001 a0009c0042t0001 a0083c0154t0001	a0001c0054t0002g0212 a0001c0171t0002g0108 a0004c0188t0001g0194 others(4): Show a0001c0054t0002g0212 a0001c0171t0002g0108 a0004c0188t0001g0194 a0007c0030t0001g0304 a0007c0050t0001g0201 a0009c0042t0001g0273 a0083c0154t0001g0281	7	380	0.0184	43	c.204 others(60): Show c.2044+595_2044+596insCTTTCCTTTCCTTTCCTTTCCTTTCCCT TCCTTCCTTCCTTCC		FBN3	ENSG00000142449.13	transcript	ENST00000600128.6	protein_coding	16/63						chr19	TogoVar
FBXL17_chr5_107854035_108387098	107980664	A A	ATATATAT others(36): Show ATATATATATATATATATATATATATATATATATATATTTTTTT	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01981.hp1 HG01109.hp1 HG01981.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0005 a0001c0001t0001 a0001c0001t0005	a0001c0001t0001g0203 a0001c0001t0005g0211 a0001c0001t0001g0203 a0001c0001t0005g0211	2	244	0.0082	43	c.182 others(64): Show c.1822+40260_1822+40261insAAAAAAATATATATATATATATAT ATATATATATATATATATA		FBXL17	ENSG00000145743.18	transcript	ENST00000542267.7	protein_coding	7/8						chr5	TogoVar
FBXL17_chr5_107854035_108387098	107980664	A A	ATATATAT others(36): Show ATATATATATATATATATATATATATATATATATTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02135.hp2 HG02135.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0033 a0001c0001t0033	a0001c0001t0033g0009 a0001c0001t0033g0009	1	244	0.0041	43	c.182 others(64): Show c.1822+40260_1822+40261insAAAAAAAAAAATATATATATATAT ATATATATATATATATATA		FBXL17	ENSG00000145743.18	transcript	ENST00000542267.7	protein_coding	7/8						chr5	TogoVar
FBXL17_chr5_107854035_108387098	107980664	A A	ATATATAT others(36): Show ATATATATATATATATATATATATATATATTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG00738.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0174 a0001c0001t0010g0174	1	244	0.0041	43	c.182 others(64): Show c.1822+40260_1822+40261insAAAAAAAAAAAAAAATATATATAT ATATATATATATATATATA		FBXL17	ENSG00000145743.18	transcript	ENST00000542267.7	protein_coding	7/8						chr5	TogoVar
FBXL17_chr5_107854035_108387098	107980664	A A	ATATATAT others(36): Show ATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02080.hp1 HG02083.hp2 HG02080.hp1 HG02083.hp2	a0001 a0007 a0001 a0007	a0001c0001 a0007c0015 a0001c0001 a0007c0015	a0001c0001t0022 a0007c0015t0006 a0001c0001t0022 a0007c0015t0006	a0001c0001t0022g0006 a0007c0015t0006g0180 a0001c0001t0022g0006 a0007c0015t0006g0180	2	244	0.0082	43	c.182 others(64): Show c.1822+40260_1822+40261insAAAAAAAAAAAAAAAAAAATATAT ATATATATATATATATATA		FBXL17	ENSG00000145743.18	transcript	ENST00000542267.7	protein_coding	7/8						chr5	TogoVar
FBXO31_chr16_87321987_87388776	87365007	T T	TATATATA others(36): Show TATATATATATATATATATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01934.hp2 HG01934.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0254 a0001c0001t0003g0254	1	376	0.0027	43	c.341 others(60): Show c.341-4642_341-4641insTATATATATATATATATATATATATATA TATATATATATATAT		FBXO31	ENSG00000103264.18	transcript	ENST00000311635.12	protein_coding	1/8						chr16	TogoVar
FBXO42_chr1_16241840_16357480	16350757	A A	AAAGAAAG others(36): Show AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	intron_variant intron_variant	MODIFIER	HG03579.hp1 HG03579.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0006 a0002c0003t0006	a0002c0003t0006g0260 a0002c0003t0006g0260	1	294	0.0034	43	c.-18 others(60): Show c.-18+1497_-18+1498insCTTTCTTTCTTTCTTTCTTTCTTTCTTT CTTTCTTTCTTTCTT		FBXO42	ENSG00000037637.11	transcript	ENST00000375592.8	protein_coding	1/9						chr1	TogoVar
FBXW11_chr5_171856549_172011638	171952447	A A	ATATATAT others(36): Show ATATATATATATATATATATATATATATATATATTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02738.hp2 HG02738.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0158 a0001c0001t0001g0158	1	158	0.0063	43	c.147 others(60): Show c.147+5149_147+5150insAAAAAAAAAAATATATATATATATATAT ATATATATATATATA		FBXW11	ENSG00000072803.18	transcript	ENST00000517395.6	protein_coding	2/13						chr5	TogoVar
FBXW11_chr5_171856549_172011638	171952447	A A	ATATATAT others(36): Show ATATATATATATATATATATATATATATATTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG01109.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0033 a0001c0001t0001g0033	1	158	0.0063	43	c.147 others(60): Show c.147+5149_147+5150insAAAAAAAAAAAAAAATATATATATATAT ATATATATATATATA		FBXW11	ENSG00000072803.18	transcript	ENST00000517395.6	protein_coding	2/13						chr5	TogoVar
FCHO2_chr5_72951041_73095522	73081754	A A	AACAATTG others(36): Show AACAATTGTTTGTTCTTTTCTCTTTAAAGGTATCATCAAATGGT	frameshift_variant frameshift_variant	HIGH	NA19082.hp2 NA19082.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0013 a0001c0001t0013	a0001c0001t0013g0193 a0001c0001t0013g0193	1	286	0.0035	43	c.198 others(55): Show c.1981-27_1996dupCAATTGTTTGTTCTTTTCTCTTTAAAGGTATCA TCAAATGGTA	p.Ile others(5): Show p.Ile666fs	FCHO2	ENSG00000157107.14	transcript	ENST00000430046.7	protein_coding	23/26	2053/4921	1997/2433	666/810		INFO_REALIGN_3_PRIME	chr5	TogoVar
FERMT2_chr14_52852273_52956050	52902868	C C	CAAAAAAA others(36): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01358.hp1 HG01358.hp1	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0002 a0001c0007t0002	a0001c0007t0002g0214 a0001c0007t0002g0214	1	288	0.0035	43	c.392 others(60): Show c.392-9442_392-9441insTTTTTTTTTTTTTTTTTTTTTTTTTTTT TTTTTTTTTTTTTTT		FERMT2	ENSG00000073712.15	transcript	ENST00000341590.8	protein_coding	3/14						chr14	TogoVar
FGD6_chr12_95071749_95222467	95148809	T T	TATATTAT others(36): Show TATATTATATAAGATATAGCATATATTATATATAATATAAGATA	intron_variant intron_variant	MODIFIER	NA18986.hp2 NA18986.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0081 a0001c0001t0081	a0001c0001t0081g0382 a0001c0001t0081g0382	1	384	0.0026	43	c.268 others(62): Show c.2685+4001_2685+4002insTATCTTATATTATATATAATATATGC TATATCTTATATAATAT		FGD6	ENSG00000180263.14	transcript	ENST00000343958.9	protein_coding	5/20						chr12	TogoVar
FGD6_chr12_95071749_95222467	95149172	T T	TATATATT others(36): Show TATATATTATATAATATATAGCATATATATATTATATAATATTA	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00099.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0013 a0001c0001t0013	a0001c0001t0013g0009 a0001c0001t0013g0009	1	384	0.0026	43	c.268 others(62): Show c.2685+3638_2685+3639insTAATATTATATAATATATATATGCTA TATATTATATAATATAT		FGD6	ENSG00000180263.14	transcript	ENST00000343958.9	protein_coding	5/20						chr12	TogoVar
FGD6_chr12_95071749_95222467	95149293	A A	ATATATAA others(36): Show ATATATAATATATTATATTATATAGCATATATTATATAATATAT	intron_variant intron_variant	MODIFIER	NA19043.hp1 NA19043.hp1	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0036 a0001c0007t0036	a0001c0007t0036g0318 a0001c0007t0036g0318	1	384	0.0026	43	c.268 others(62): Show c.2685+3475_2685+3517dupATATATTATATAATATATGCTATATA ATATAATATATTATATA		FGD6	ENSG00000180263.14	transcript	ENST00000343958.9	protein_coding	5/20						chr12	TogoVar
FGF12_chr3_192134390_192732541	192378026	T T	TTTCTCTC others(36): Show TTTCTCTCTCTTTCTTTCTTTCTTTCTCTCTCTCTCTTTCTTTC	intron_variant intron_variant	MODIFIER	NA18522.hp2 NA19060.hp2 NA18522.hp2 NA19060.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0014 a0001c0001t0035 a0001c0001t0014 a0001c0001t0035	a0001c0001t0014g0013 a0001c0001t0035g0041 a0001c0001t0014g0013 a0001c0001t0035g0041	2	90	0.0222	43	c.14- others(60): Show c.14-17489_14-17488insGAAAGAAAGAGAGAGAGAGAAAGAAAGA AAGAAAGAGAGAGAA		FGF12	ENSG00000114279.15	transcript	ENST00000445105.7	protein_coding	2/5						chr3	TogoVar
FGF18_chr5_171414647_171462626	171461629	C C	CTTTCTTT others(36): Show CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00639.hp1 HG00741.hp2 HG02723.hp1 others(1): Show HG00639.hp1 HG00741.hp2 HG02723.hp1 HG03453.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0019 a0001c0001t0001g0164 a0001c0001t0001g0348 others(1): Show a0001c0001t0001g0019 a0001c0001t0001g0164 a0001c0001t0001g0348 a0001c0001t0001g0352	4	388	0.0103	43	c.48 others(54): Show c.4824_*4825insTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT TCTTTCTTT		FGF18	ENSG00000156427.8	transcript	ENST00000274625.6	protein_coding					4004		chr5	TogoVar
FGF18_chr5_171414647_171462626	171461630	T T	TTTCTTTC others(36): Show TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00609.hp2 HG00609.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0109 a0001c0001t0001g0109	1	388	0.0026	43	c.48 others(54): Show c.4825_*4826insTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT CTTTCTTTC		FGF18	ENSG00000156427.8	transcript	ENST00000274625.6	protein_coding					4005		chr5	TogoVar
FGF7_chr15_49418242_49493775	49489803	T T	TTTATATA others(36): Show TTTATATATATATATATATATATTTTTATATATATATATATTTA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02698.hp2 HG02698.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0020 a0001c0001t0020	a0001c0001t0020g0275 a0001c0001t0020g0275	1	358	0.0028	43	c.52 others(54): Show c.5299_*5300insTTATATATATATATATATATATTTTTATATATAT ATATATTTA		FGF7	ENSG00000140285.12	transcript	ENST00000267843.9	protein_coding					1029		chr15	TogoVar
FGGY_chr1_59292094_59767730	59491041	T T	TTCCTTCC others(36): Show TTCCTTCCCTCCCCTCCCTCCTTCTTTCTCTCCCTCCCTCCCTC	intron_variant intron_variant	MODIFIER	HG02683.hp2 HG02683.hp2	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0001 a0002c0004t0001	a0002c0004t0001g0084 a0002c0004t0001g0084	1	166	0.0060	43	c.671 others(62): Show c.671-21270_671-21269insTCCTTCCCTCCCCTCCCTCCTTCTTT CTCTCCCTCCCTCCCTC		FGGY	ENSG00000172456.18	transcript	ENST00000303721.12	protein_coding	6/15						chr1	TogoVar
FKBP2_chr11_64236095_64249132	64237126	G G	GAGAGAGA others(36): Show GAGAGAGAGAGAGAGAGAGAGACAGAGACAGACAGAGACAGACA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18969.hp1 NA19010.hp1 NA19085.hp1 NA18969.hp1 NA19010.hp1 NA19085.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0001 a0001c0001t0002g0001	3	332	0.0090	43	c.-40 others(54): Show c.-4011_-4010insAGAGAGAGAGAGAGAGAGAGACAGAGACAGACAG AGACAGACA		FKBP2	ENSG00000173486.14	transcript	ENST00000309366.9	protein_coding					3968		chr11	TogoVar
FLNB_chr3_58003422_58177251	58100373	A A	AAATATAT others(36): Show AAATATATATATATATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02615.hp1 HG02615.hp1	a0017 a0017	a0017c0046 a0017c0046	a0017c0046t0003 a0017c0046t0003	a0017c0046t0003g0015 a0017c0046t0003g0015	1	180	0.0056	43	c.134 others(62): Show c.1345+1466_1345+1467insATATATATATATATATATATATATAT ATATATATATATATATA		FLNB	ENSG00000136068.16	transcript	ENST00000295956.9	protein_coding	8/45					INFO_REALIGN_3_PRIME	chr3	TogoVar
FLT3_chr13_27998274_28105576	27999113	A A	ATTTATAT others(36): Show ATTTATATACATAAATATATATATTTATATACATATAAATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00323.hp2 HG02165.hp2 HG02738.hp1 others(2): Show HG00323.hp2 HG02165.hp2 HG02738.hp1 NA18986.hp2 NA19003.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0001 a0001c0001t0001 a0002c0002t0001	a0001c0001t0001g0082 a0002c0002t0001g0003 a0002c0002t0001g0005 others(2): Show a0001c0001t0001g0082 a0002c0002t0001g0003 a0002c0002t0001g0005 a0002c0002t0001g0156 a0002c0002t0001g0170	5	292	0.0171	43	c.49 others(54): Show c.4938_*4939insATATATTTATATGTATATAAATATATATATTTAT GTATATAAA		FLT3	ENSG00000122025.15	transcript	ENST00000241453.12	protein_coding					4160		chr13	TogoVar
FLT3_chr13_27998274_28105576	27999113	A A	ATTTATAT others(36): Show ATTTATATACATATAAATTTATATACATATAAATATAAATATTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02965.hp2 HG02965.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0002 a0001c0004t0002	a0001c0004t0002g0134 a0001c0004t0002g0134	1	292	0.0034	43	c.49 others(54): Show c.4938_*4939insAAATATTTATATTTATATGTATATAAATTTATAT GTATATAAA		FLT3	ENSG00000122025.15	transcript	ENST00000241453.12	protein_coding					4160		chr13	TogoVar
FOLR1_chr11_72187140_72201299	72201293	C C	CACGTATA others(36): Show CACGTATACACGTATACACGTATACACGTATACACGTATACACG	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18984.hp1 NA18984.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	412	0.0024	43	c.51 others(54): Show c.5116_*5117insACGTATACACGTATACACGTATACACGTATACAC GTATACACG		FOLR1	ENSG00000110195.14	transcript	ENST00000393676.5	protein_coding					4995		chr11	TogoVar
FOXI1_chr5_170100897_170114734	170105348	G G	GGAGAGGG others(36): Show GGAGAGGGGGGGGGGGGGGAGAGAGAGAGAGAGAGAGAGAGAGA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02896.hp2 HG02896.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0004 a0001c0005t0004	a0001c0005t0004g0002 a0001c0005t0004g0002	1	412	0.0024	43	c.-61 others(52): Show c.-610_-609insGAGAGGGGGGGGGGGGGGAGAGAGAGAGAGAGAGAG AGAGAGA		FOXI1	ENSG00000168269.10	transcript	ENST00000306268.8	protein_coding					548		chr5	TogoVar
FOXI1_chr5_170100897_170114734	170105348	G G	GGAGAGGG others(36): Show GGAGAGGGGGGGGGGGGGGGGAGAGAGAGAGAGAGAGAGAGAGA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02897.hp2 NA19086.hp1 HG02897.hp2 NA19086.hp1	a0001 a0001	a0001c0002 a0001c0005 a0001c0002 a0001c0005	a0001c0002t0002 a0001c0005t0004 a0001c0002t0002 a0001c0005t0004	a0001c0002t0002g0002 a0001c0005t0004g0002 a0001c0002t0002g0002 a0001c0005t0004g0002	2	412	0.0049	43	c.-61 others(52): Show c.-610_-609insGAGAGGGGGGGGGGGGGGGGAGAGAGAGAGAGAGAG AGAGAGA		FOXI1	ENSG00000168269.10	transcript	ENST00000306268.8	protein_coding					548		chr5	TogoVar
FOXI1_chr5_170100897_170114734	170105356	G G	GGGGGGGG others(36): Show GGGGGGGGGGGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02040.hp1 NA19009.hp1 HG02040.hp1 NA19009.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0004 a0001c0002t0002g0004	2	412	0.0049	43	c.-60 others(52): Show c.-602_-601insGGGGGGGGGGGGAGAGAGAGAGAGAGAGAGAGAGAG AGAGAGA		FOXI1	ENSG00000168269.10	transcript	ENST00000306268.8	protein_coding					540		chr5	TogoVar
FOXJ2_chr12_8027716_8060517	8050872	C C	CCCTTCCC others(36): Show CCCTTCCCCTTCCCTTCCCCTTCCCTTCCCCTTCCCTTCCCTTT	intron_variant intron_variant	MODIFIER	HG03654.hp1 HG03654.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0114 a0001c0001t0003g0114	1	374	0.0027	43	c.163 others(60): Show c.1636+277_1636+319dupTTCCCCTTCCCTTCCCTTTCCTTCCCCT TCCCTTCCCCTTCCC		FOXJ2	ENSG00000065970.9	transcript	ENST00000162391.8	protein_coding	10/10					INFO_REALIGN_3_PRIME	chr12	TogoVar
FOXK1_chr7_4677295_4776442	4776197	C C	CGTGGGAG others(36): Show CGTGGGAGGGTTTTGTGACTTAAAAAGATCTCTCTTGCGCGGAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01891.hp2 HG02818.hp1 HG03041.hp2 HG01891.hp2 HG02818.hp1 HG03041.hp2	a0001 a0001	a0001c0002 a0001c0003 a0001c0002 a0001c0003	a0001c0002t0055 a0001c0003t0111 a0001c0003t0112 a0001c0002t0055 a0001c0003t0111 a0001c0003t0112	a0001c0002t0055g0087 a0001c0003t0111g0059 a0001c0003t0112g0006 a0001c0002t0055g0087 a0001c0003t0111g0059 a0001c0003t0112g0006	3	294	0.0102	43	c.13 others(56): Show c.13733_*13734insGTGGGAGGGTTTTGTGACTTAAAAAGATCTCT CTTGCGCGGAT		FOXK1	ENSG00000164916.11	transcript	ENST00000328914.5	protein_coding					4756		chr7	TogoVar
FOXK2_chr17_82514732_82609602	82518700	T T	TATATATA others(36): Show TATATATATAGTTCATATATATATAGTTAATATATATATAGTTC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01167.hp1 HG01167.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0070 a0001c0001t0001g0070	1	308	0.0033	43	c.-11 others(54): Show c.-1189_-1188insATATATATAGTTCATATATATATAGTTAATATAT ATATAGTTC		FOXK2	ENSG00000141568.21	transcript	ENST00000335255.10	protein_coding					1031		chr17	TogoVar
FOXK2_chr17_82514732_82609602	82518700	T T	TATATATA others(36): Show TATATATATAGTTCATATATATATAGTTCATATATATATAGTTC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00423.hp2 HG00673.hp1 HG00735.hp2 others(16): Show HG00423.hp2 HG00673.hp1 HG00735.hp2 HG01123.hp1 HG01168.hp2 HG01169.hp2 HG01255.hp1 HG01993.hp1 HG02132.hp2 HG02165.hp1 HG02258.hp2 HG02572.hp1 HG02965.hp2 HG02970.hp1 HG02976.hp1 NA18993.hp2 NA19043.hp1 NA20805.hp1 NA21309.hp1	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0001c0003 a0001c0027 others(2): Show a0001c0001 a0001c0003 a0001c0027 a0002c0002 a0004c0005	a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 others(9): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0008 a0001c0001t0010 a0001c0001t0022 a0001c0001t0042 a0001c0003t0008 a0001c0027t0023 a0002c0002t0003 a0002c0002t0011 a0004c0005t0001	a0001c0001t0002g0025 a0001c0001t0002g0027 a0001c0001t0002g0074 others(16): Show a0001c0001t0002g0025 a0001c0001t0002g0027 a0001c0001t0002g0074 a0001c0001t0003g0040 a0001c0001t0003g0078 a0001c0001t0004g0046 a0001c0001t0004g0091 a0001c0001t0008g0028 a0001c0001t0010g0021 a0001c0001t0022g0031 a0001c0001t0042g0041 a0001c0003t0008g0059 a0001c0027t0023g0061 a0002c0002t0003g0006 a0002c0002t0011g0035 a0002c0002t0011g0036 a0002c0002t0011g0037 a0002c0002t0011g0038 a0004c0005t0001g0014	19	308	0.0617	43	c.-11 others(54): Show c.-1189_-1188insATATATATAGTTCATATATATATAGTTCATATAT ATATAGTTC		FOXK2	ENSG00000141568.21	transcript	ENST00000335255.10	protein_coding					1031		chr17	TogoVar
FOXN3_chr14_89151177_89422233	89363947	A A	ATATATAT others(36): Show ATATATATATATATATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03225.hp1 HG03225.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0175 a0001c0001t0002g0175	1	230	0.0044	43	c.544 others(62): Show c.544-13140_544-13139insATATATATATATATATATATATATAT ATATATATATATATATA		FOXN3	ENSG00000053254.16	transcript	ENST00000557258.6	protein_coding	2/5						chr14	TogoVar
FOXN3_chr14_89151177_89422233	89377020	C C	CAAAAAAA others(36): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA19068.hp1 NA19068.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0009	a0001c0001t0009g0079 a0001c0001t0009g0079	1	230	0.0044	43	c.544 others(62): Show c.544-26213_544-26212insTTTTTTTTTTTTTTTTTTTTTTTTTT TTTTTTTTTTTTTTTTT		FOXN3	ENSG00000053254.16	transcript	ENST00000557258.6	protein_coding	2/5						chr14	TogoVar
FOXQ1_chr6_1307098_1319758	1308383	G G	GGTCAGTA others(36): Show GGTCAGTAATGCCCAGCCAAATTCTAAGATTCTTGGATTAAACC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03139.hp2 HG03139.hp2	a0002 a0002	a0002c0005 a0002c0005	a0002c0005t0006 a0002c0005t0006	a0002c0005t0006g0000 a0002c0005t0006g0000	1	406	0.0025	43	c.-43 others(54): Show c.-4322_-4321insGTCAGTAATGCCCAGCCAAATTCTAAGATTCTTG GATTAAACC		FOXQ1	ENSG00000164379.7	transcript	ENST00000296839.5	protein_coding					3714		chr6	TogoVar
FOXQ1_chr6_1307098_1319758	1316935	G G	GCCCCCGC others(36): Show GCCCCCGCCCACCCCCCTCCCGCCCCCCCTCCAGCCTACCCCTC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00323.hp1 HG01255.hp1 HG02071.hp2 others(9): Show HG00323.hp1 HG01255.hp1 HG02071.hp2 HG02735.hp2 HG02970.hp2 HG02976.hp1 HG03471.hp2 HG03654.hp2 NA18747.hp1 NA18954.hp1 NA18987.hp2 NA19084.hp1	a0001 a0004 a0005 a0001 a0004 a0005	a0001c0001 a0004c0003 a0005c0007 a0001c0001 a0004c0003 a0005c0007	a0001c0001t0002 a0001c0001t0021 a0004c0003t0001 others(1): Show a0001c0001t0002 a0001c0001t0021 a0004c0003t0001 a0005c0007t0001	a0001c0001t0002g0000 a0001c0001t0021g0000 a0004c0003t0001g0000 others(1): Show a0001c0001t0002g0000 a0001c0001t0021g0000 a0004c0003t0001g0000 a0005c0007t0001g0000	12	406	0.0296	43	c.30 others(54): Show c.3019_*3020insCCCCCGCCCACCCCCCTCCCGCCCCCCCTCCAGC CTACCCCTC		FOXQ1	ENSG00000164379.7	transcript	ENST00000296839.5	protein_coding					2178		chr6	TogoVar
FOXQ1_chr6_1307098_1319758	1316935	G G	GCCCCCGC others(36): Show GCCCCCGCCCACCCCTCTCCCGCCCCCCCTCCAGCCTACCCCTC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03139.hp1 HG03139.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0000 a0001c0001t0002g0000	1	406	0.0025	43	c.30 others(54): Show c.3019_*3020insCCCCCGCCCACCCCTCTCCCGCCCCCCCTCCAGC CTACCCCTC		FOXQ1	ENSG00000164379.7	transcript	ENST00000296839.5	protein_coding					2178		chr6	TogoVar
FOXQ1_chr6_1307098_1319758	1316941	G G	GCCCACCC others(36): Show GCCCACCCCCTCCCGCCCCCCCTCCAGCCTACCCCTCCCCCCGC	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19089.hp1 NA19089.hp1	a0005 a0005	a0005c0011 a0005c0011	a0005c0011t0001 a0005c0011t0001	a0005c0011t0001g0000 a0005c0011t0001g0000	1	406	0.0025	43	c.30 others(54): Show c.3025_*3026insCCCACCCCCTCCCGCCCCCCCTCCAGCCTACCCC TCCCCCCGC		FOXQ1	ENSG00000164379.7	transcript	ENST00000296839.5	protein_coding					2184		chr6	TogoVar
FOXQ1_chr6_1307098_1319758	1316957	C C	CCCCCCCT others(36): Show CCCCCCCTCCAGCCTACCCCTCCCCCCCGCCCACCCCCCTCCCG	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18994.hp1 NA18994.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0000 a0001c0001t0002g0000	1	406	0.0025	43	c.30 others(54): Show c.3041_*3042insCCCCCCTCCAGCCTACCCCTCCCCCCCGCCCACC CCCCTCCCG		FOXQ1	ENSG00000164379.7	transcript	ENST00000296839.5	protein_coding					2200		chr6	TogoVar
FOXQ1_chr6_1307098_1319758	1316961	C C	CCCTCCAG others(36): Show CCCTCCAGCCTACCCCTCCCCCCGCCCACCCCCCTCCCGCCCCT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18989.hp2 NA18989.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0000 a0001c0001t0002g0000	1	406	0.0025	43	c.30 others(54): Show c.3045_*3046insCCTCCAGCCTACCCCTCCCCCCGCCCACCCCCCT CCCGCCCCT		FOXQ1	ENSG00000164379.7	transcript	ENST00000296839.5	protein_coding					2204		chr6	TogoVar

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Search Results (Total: 2299 hits)