view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
CLDN8_chr21_30209006_30221097 | 30210418 | T | TATATATA others(36): Show |
downstream_gene_variant | MODIFIER | HG02922.hp2 NA19043.hp2 |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0002a0002c0002t0008 | a0001c0001t0002g0000 a0002c0002t0008g0000 |
2 | 464 | 0.0043 | 43 | c.*48 others(54): Show |
CLDN8 | ENSG00000156284.6 | transcript | ENST00000399899.2 | protein_coding | 3587 | chr21 | TogoVar | |||||||
CLDN8_chr21_30209006_30221097 | 30210575 | T | TATATATA others(36): Show |
downstream_gene_variant | MODIFIER | HG03710.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0000 | 1 | 459 | 0.0022 | 43 | c.*46 others(54): Show |
CLDN8 | ENSG00000156284.6 | transcript | ENST00000399899.2 | protein_coding | 3430 | chr21 | TogoVar | |||||||
CLEC4G_chr19_7723957_7737110 | 7732906 | A | AAAAATAT others(36): Show |
upstream_gene_variant | MODIFIER | HG01928.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 | 1 | 50 | 0.0200 | 43 | c.-80 others(52): Show |
CLEC4G | ENSG00000182566.15 | transcript | ENST00000328853.11 | protein_coding | 797 | chr19 | TogoVar | |||||||
CLIP1_chr12_122266469_122427669 | 122390172 | G | GATATATA others(36): Show |
intron_variant | MODIFIER | NA18968.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0193 | 1 | 42 | 0.0238 | 43 | c.-10 others(62): Show |
CLIP1 | ENSG00000130779.22 | transcript | ENST00000620786.5 | protein_coding | 1/25 | chr12 | TogoVar | |||||||
CLNK_chr4_10481395_10689768 | 10537706 | C | CCTTCCTT others(36): Show |
intron_variant | MODIFIER | NA19000.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0065 | 1 | 15 | 0.0667 | 43 | c.602 others(60): Show |
CLNK | ENSG00000109684.16 | transcript | ENST00000226951.11 | protein_coding | 11/18 | chr4 | TogoVar | |||||||
CLUH_chr17_2684387_2716764 | 2691956 | G | GCCCCCGC others(36): Show |
intron_variant | MODIFIER | HG00408.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0144 | 1 | 395 | 0.0025 | 43 | c.365 others(58): Show |
CLUH | ENSG00000132361.18 | transcript | ENST00000651024.2 | protein_coding | 23/25 | chr17 | TogoVar | |||||||
CLUL1_chr18_591988_655182 | 627030 | A | AGAAAGAG others(36): Show |
intron_variant | MODIFIER | HG01928.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0083 | 1 | 122 | 0.0082 | 43 | c.424 others(56): Show |
CLUL1 | ENSG00000079101.18 | transcript | ENST00000692774.1 | protein_coding | 5/9 | chr18 | TogoVar | |||||||
CMC2_chr16_80961448_81011885 | 80965246 | T | TATATATA others(36): Show |
downstream_gene_variant | MODIFIER | HG02886.hp2 | a0002 | a0002c0002 | a0002c0002t0124 | a0002c0002t0124g0104 | 1 | 388 | 0.0026 | 43 | c.*10 others(56): Show |
CMC2 | ENSG00000103121.9 | transcript | ENST00000219400.8 | protein_coding | 1201 | chr16 | TogoVar | |||||||
CNMD_chr13_52698264_52744820 | 52740813 | T | TTTTGCAA others(36): Show |
upstream_gene_variant | MODIFIER | HG02683.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0212 | 1 | 328 | 0.0030 | 43 | c.-11 others(54): Show |
CNMD | ENSG00000136110.13 | transcript | ENST00000377962.8 | protein_coding | 994 | chr13 | TogoVar | |||||||
CNMD_chr13_52698264_52744820 | 52742552 | G | GAGACCAG others(36): Show |
upstream_gene_variant | MODIFIER | HG01517.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0018 | 1 | 328 | 0.0030 | 43 | c.-28 others(54): Show |
CNMD | ENSG00000136110.13 | transcript | ENST00000377962.8 | protein_coding | 2733 | chr13 | TogoVar | |||||||
CNOT1_chr16_58514951_58634826 | 58601734 | T | TAAAAAAA others(36): Show |
intron_variant | MODIFIER | HG02148.hp1 | a0001 | a0001c0008 | a0001c0008t0005 | a0001c0008t0005g0141 | 1 | 57 | 0.0175 | 43 | c.-17 others(62): Show |
CNOT1 | ENSG00000125107.19 | transcript | ENST00000317147.10 | protein_coding | 1/48 | chr16 | TogoVar | |||||||
CNOT3_chr19_54132762_54160681 | 54134108 | C | CCCCTCTC others(36): Show |
upstream_gene_variant | MODIFIER | HG03688.hp1 | a0005 | a0005c0007 | a0005c0007t0001 | a0005c0007t0001g0046 | 1 | 167 | 0.0060 | 43 | c.-39 others(54): Show |
CNOT3 | ENSG00000088038.20 | transcript | ENST00000221232.11 | protein_coding | 3653 | chr19 | TogoVar | |||||||
CNST_chr1_246561456_246673595 | 246604681 | T | TATTTTGA others(36): Show |
intron_variant | MODIFIER | HG02622.hp1 HG03486.hp1 |
a0002a0008 | a0002c0002a0008c0011 | a0002c0002t0015a0008c0011t0015 | a0002c0002t0015g0166 a0008c0011t0015g0211 |
2 | 318 | 0.0063 | 43 | c.379 others(62): Show |
CNST | ENSG00000162852.14 | transcript | ENST00000366513.9 | protein_coding | 2/10 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
CNTN1_chr12_40687439_41077415 | 40813038 | C | CTTTCTTT others(36): Show |
intron_variant | MODIFIER | HG01099.hp1 | a0001 | a0001c0003 | a0001c0003t0005 | a0001c0003t0005g0072 | 1 | 51 | 0.0196 | 43 | c.-76 others(62): Show |
CNTN1 | ENSG00000018236.15 | transcript | ENST00000551295.7 | protein_coding | 1/23 | chr12 | TogoVar | |||||||
CNTN4_chr3_2093866_3062959 | 2520259 | C | CTTTTTTT others(36): Show |
intron_variant | MODIFIER | HG03471.hp1 | a0001 | a0001c0005 | a0001c0005t0010 | a0001c0005t0010g0085 | 1 | 38 | 0.0263 | 43 | c.-88 others(62): Show |
CNTN4 | ENSG00000144619.15 | transcript | ENST00000418658.6 | protein_coding | 3/24 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
CNTN5_chr11_99015949_100363885 | 99201351 | T | TTCCTTCC others(36): Show |
intron_variant | MODIFIER | HG02109.hp2 | a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0021 | 1 | 8 | 0.1250 | 43 | c.-20 others(66): Show |
CNTN5 | ENSG00000149972.12 | transcript | ENST00000524871.6 | protein_coding | 1/24 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
CNTNAP2_chr7_146111801_148425998 | 146721889 | A | ATATATAT others(36): Show |
intron_variant | MODIFIER | HG03540.hp1 | a0001 | a0001c0002 | a0001c0002t0010 | a0001c0002t0010g0002 | 1 | 14 | 0.0714 | 43 | c.98- others(60): Show |
CNTNAP2 | ENSG00000174469.23 | transcript | ENST00000361727.8 | protein_coding | 1/23 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
CNTNAP2_chr7_146111801_148425998 | 147586523 | G | GAAGAGGG others(36): Show |
intron_variant | MODIFIER | HG00735.hp2 HG03239.hp2 |
a0001 | a0001c0002a0001c0019 | a0001c0002t0002a0001c0019t0006 | a0001c0002t0002g0040 a0001c0019t0006g0015 |
2 | 22 | 0.0909 | 43 | c.189 others(64): Show |
CNTNAP2 | ENSG00000174469.23 | transcript | ENST00000361727.8 | protein_coding | 12/23 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
CNTNAP4_chr16_76272401_76565757 | 76460773 | A | AAAAAAAA others(36): Show |
intron_variant | MODIFIER | HG03516.hp1 | a0001 | a0001c0001 | a0001c0001t0005 | a0001c0001t0005g0046 | 1 | 104 | 0.0096 | 43 | c.133 others(62): Show |
CNTNAP4 | ENSG00000152910.19 | transcript | ENST00000611870.5 | protein_coding | 8/23 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
CNTNAP4_chr16_76272401_76565757 | 76460773 | A | AAAAAAAA others(36): Show |
intron_variant | MODIFIER | HG01255.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0056 | 1 | 104 | 0.0096 | 43 | c.133 others(62): Show |
CNTNAP4 | ENSG00000152910.19 | transcript | ENST00000611870.5 | protein_coding | 8/23 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
CNTNAP4_chr16_76272401_76565757 | 76470497 | A | ATATATAT others(36): Show |
intron_variant | MODIFIER | NA20300.hp2 | a0026 | a0026c0034 | a0026c0034t0006 | a0026c0034t0006g0209 | 1 | 270 | 0.0037 | 43 | c.165 others(62): Show |
CNTNAP4 | ENSG00000152910.19 | transcript | ENST00000611870.5 | protein_coding | 10/23 | chr16 | TogoVar | |||||||
CNTNAP5_chr2_124020287_124926219 | 124571527 | C | CTTTTTCT others(36): Show |
intron_variant | MODIFIER | HG02257.hp1 HG02717.hp1 HG02723.hp1 others(3): Show |
a0001a0004 | a0001c0001a0001c0002a0004c0007 | a0001c0001t0007a0001c0002t0001a0001c0002t0003others(3): Show | a0001c0001t0007g0025 a0001c0002t0001g0007 a0001c0002t0003g0056 others(3): Show |
6 | 12 | 0.5000 | 43 | c.175 others(62): Show |
CNTNAP5 | ENSG00000155052.15 | transcript | ENST00000682447.1 | protein_coding | 11/23 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
COG8_chr16_69321428_69344564 | 69339282 | T | TGAAGGGG others(36): Show |
frameshift_variant | HIGH | NA18998.hp2 | a0009 | a0009c0013 | a0009c0013t0002 | a0009c0013t0002g0136 | 1 | 358 | 0.0028 | 43 | c.270 others(50): Show |
p.Ile others(4): Show |
COG8 | ENSG00000213380.16 | transcript | ENST00000306875.10 | protein_coding | 1/6 | 282/4629 | 270/1839 | 90/612 | chr16 | TogoVar | |||
COL16A1_chr1_31647263_31709017 | 31707385 | T | TTTTCTTT others(36): Show |
upstream_gene_variant | MODIFIER | HG02735.hp1 | a0021 | a0021c0024 | a0021c0024t0001 | a0021c0024t0001g0046 | 1 | 199 | 0.0050 | 43 | c.-35 others(54): Show |
COL16A1 | ENSG00000084636.18 | transcript | ENST00000373672.8 | protein_coding | 3369 | chr1 | TogoVar | |||||||
COL18A1_chr21_45400165_45518720 | 45501652 | C | CCTCCACA others(36): Show |
intron_variant | MODIFIER | HG02965.hp1 | a0002 | a0002c0021 | a0002c0021t0002 | a0002c0021t0002g0001 | 1 | 262 | 0.0038 | 43 | c.268 others(62): Show |
COL18A1 | ENSG00000182871.16 | transcript | ENST00000651438.1 | protein_coding | 32/41 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | ||||||
COL18A1_chr21_45400165_45518720 | 45501652 | C | CCTCCACA others(36): Show |
intron_variant | MODIFIER | HG02145.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0122 | 1 | 262 | 0.0038 | 43 | c.268 others(62): Show |
COL18A1 | ENSG00000182871.16 | transcript | ENST00000651438.1 | protein_coding | 32/41 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | ||||||
COL18A1_chr21_45400165_45518720 | 45501652 | C | CCTCCACA others(36): Show |
intron_variant | MODIFIER | HG01496.hp1 HG02809.hp1 HG02886.hp1 |
a0017a0022a0023 | a0017c0089a0022c0046a0023c0047 | a0017c0089t0011a0022c0046t0004a0023c0047t0004 | a0017c0089t0011g0193 a0022c0046t0004g0164 a0023c0047t0004g0163 |
3 | 264 | 0.0114 | 43 | c.268 others(62): Show |
COL18A1 | ENSG00000182871.16 | transcript | ENST00000651438.1 | protein_coding | 32/41 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | ||||||
COL18A1_chr21_45400165_45518720 | 45501652 | C | CCTCCGCA others(36): Show |
intron_variant | MODIFIER | HG03654.hp1 HG04184.hp1 |
a0006 | a0006c0016a0006c0048 | a0006c0016t0002a0006c0048t0002 | a0006c0016t0002g0292 a0006c0048t0002g0087 |
2 | 263 | 0.0076 | 43 | c.268 others(62): Show |
COL18A1 | ENSG00000182871.16 | transcript | ENST00000651438.1 | protein_coding | 32/41 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | ||||||
COL18A1_chr21_45400165_45518720 | 45501672 | C | CCTCTGCA others(36): Show |
intron_variant | MODIFIER | NA19240.hp1 | a0001 | a0001c0003 | a0001c0003t0001 | a0001c0003t0001g0179 | 1 | 288 | 0.0035 | 43 | c.268 others(62): Show |
COL18A1 | ENSG00000182871.16 | transcript | ENST00000651438.1 | protein_coding | 32/41 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | ||||||
COL18A1_chr21_45400165_45518720 | 45501677 | G | GCAGAAGG others(36): Show |
intron_variant | MODIFIER | HG02280.hp2 HG02922.hp1 |
a0002a0003 | a0002c0064a0003c0096 | a0002c0064t0001a0003c0096t0003 | a0002c0064t0001g0040 a0003c0096t0003g0020 |
2 | 288 | 0.0069 | 43 | c.268 others(62): Show |
COL18A1 | ENSG00000182871.16 | transcript | ENST00000651438.1 | protein_coding | 32/41 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | ||||||
COL18A1_chr21_45400165_45518720 | 45501689 | C | CCAGGGGC others(36): Show |
intron_variant | MODIFIER | HG01192.hp2 HG03453.hp1 HG03579.hp1 others(2): Show |
a0001a0007a0015 | a0001c0005a0001c0013a0007c0018others(2): Show | a0001c0005t0007a0001c0013t0002a0007c0018t0005others(2): Show | a0001c0005t0007g0255 a0001c0013t0002g0102 a0007c0018t0005g0112 others(2): Show |
5 | 274 | 0.0182 | 43 | c.268 others(62): Show |
COL18A1 | ENSG00000182871.16 | transcript | ENST00000651438.1 | protein_coding | 32/41 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | ||||||
COL18A1_chr21_45400165_45518720 | 45501701 | C | CAGCCGGT others(36): Show |
intron_variant | MODIFIER | HG01258.hp2 HG04184.hp2 NA18999.hp2 others(2): Show |
a0001 | a0001c0002a0001c0003a0001c0004others(1): Show | a0001c0002t0002a0001c0003t0001a0001c0004t0001others(1): Show | a0001c0002t0002g0239 a0001c0003t0001g0167 a0001c0003t0001g0190 others(2): Show |
5 | 262 | 0.0191 | 43 | c.268 others(62): Show |
COL18A1 | ENSG00000182871.16 | transcript | ENST00000651438.1 | protein_coding | 32/41 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | ||||||
COL18A1_chr21_45400165_45518720 | 45501744 | C | CAGCCGGT others(36): Show |
intron_variant | MODIFIER | HG01167.hp2 HG02647.hp1 HG02965.hp2 others(1): Show |
a0001a0006 | a0001c0011a0006c0048 | a0001c0011t0001a0006c0048t0002 | a0001c0011t0001g0009 a0001c0011t0001g0177 a0001c0011t0001g0187 others(1): Show |
4 | 182 | 0.0220 | 43 | c.268 others(62): Show |
COL18A1 | ENSG00000182871.16 | transcript | ENST00000651438.1 | protein_coding | 32/41 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | ||||||
COL18A1_chr21_45400165_45518720 | 45501775 | C | CCAGGGGC others(36): Show |
intron_variant | MODIFIER | HG03704.hp2 NA19012.hp1 |
a0001 | a0001c0001a0001c0055 | a0001c0001t0004a0001c0055t0003 | a0001c0001t0004g0226 a0001c0055t0003g0139 |
2 | 259 | 0.0077 | 43 | c.268 others(62): Show |
COL18A1 | ENSG00000182871.16 | transcript | ENST00000651438.1 | protein_coding | 32/41 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | ||||||
COL18A1_chr21_45400165_45518720 | 45501787 | C | CAGCCGGT others(36): Show |
intron_variant | MODIFIER | HG01496.hp1 HG02922.hp1 HG03942.hp1 others(2): Show |
a0001a0003a0013others(2): Show | a0001c0005a0003c0096a0013c0062others(2): Show | a0001c0005t0007a0003c0096t0003a0013c0062t0002others(2): Show | a0001c0005t0007g0255 a0003c0096t0003g0020 a0013c0062t0002g0075 others(2): Show |
5 | 257 | 0.0195 | 43 | c.268 others(62): Show |
COL18A1 | ENSG00000182871.16 | transcript | ENST00000651438.1 | protein_coding | 32/41 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | ||||||
COL18A1_chr21_45400165_45518720 | 45501861 | C | CCAGGGGC others(36): Show |
intron_variant | MODIFIER | NA18906.hp1 | a0002 | a0002c0021 | a0002c0021t0002 | a0002c0021t0002g0166 | 1 | 267 | 0.0037 | 43 | c.268 others(62): Show |
COL18A1 | ENSG00000182871.16 | transcript | ENST00000651438.1 | protein_coding | 32/41 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | ||||||
COL18A1_chr21_45400165_45518720 | 45502024 | A | AGAAGGAC others(36): Show |
intron_variant | MODIFIER | HG03471.hp1 HG03540.hp1 |
a0001 | a0001c0071a0001c0076 | a0001c0071t0004a0001c0076t0001 | a0001c0071t0004g0168 a0001c0076t0001g0043 |
2 | 286 | 0.0070 | 43 | c.268 others(62): Show |
COL18A1 | ENSG00000182871.16 | transcript | ENST00000651438.1 | protein_coding | 32/41 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | ||||||
COL18A1_chr21_45400165_45518720 | 45502047 | C | CAGCCGGT others(36): Show |
intron_variant | MODIFIER | HG01496.hp1 | a0017 | a0017c0089 | a0017c0089t0011 | a0017c0089t0011g0193 | 1 | 287 | 0.0035 | 43 | c.268 others(62): Show |
COL18A1 | ENSG00000182871.16 | transcript | ENST00000651438.1 | protein_coding | 32/41 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | ||||||
COL19A1_chr6_69861556_70217468 | 69921356 | A | AATCATAT others(36): Show |
intron_variant | MODIFIER | NA19030.hp1 | a0002 | a0002c0003 | a0002c0003t0002 | a0002c0003t0002g0175 | 1 | 173 | 0.0058 | 43 | c.267 others(60): Show |
COL19A1 | ENSG00000082293.13 | transcript | ENST00000620364.5 | protein_coding | 4/50 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | ||||||
COL22A1_chr8_138583235_138919041 | 138676413 | A | AAAGAAAG others(36): Show |
intron_variant | MODIFIER | HG00280.hp2 | a0001 | a0001c0002 | a0001c0002t0003 | a0001c0002t0003g0009 | 1 | 73 | 0.0137 | 43 | c.315 others(60): Show |
COL22A1 | ENSG00000169436.18 | transcript | ENST00000303045.11 | protein_coding | 41/64 | chr8 | TogoVar | |||||||
COL24A1_chr1_85724233_86161772 | 85799211 | A | AAAAAAAG others(36): Show |
intron_variant | MODIFIER | NA18522.hp1 | a0014 | a0014c0020 | a0014c0020t0002 | a0014c0020t0002g0172 | 1 | 37 | 0.0270 | 43 | c.395 others(64): Show |
COL24A1 | ENSG00000171502.15 | transcript | ENST00000370571.7 | protein_coding | 47/59 | chr1 | TogoVar | |||||||
COL4A1_chr13_110143963_110312157 | 110255543 | A | AAGGAAGG others(36): Show |
intron_variant | MODIFIER | HG02922.hp2 NA19079.hp1 |
a0002a0003 | a0002c0109a0003c0014 | a0002c0109t0002a0003c0014t0001 | a0002c0109t0002g0265 a0003c0014t0001g0210 |
2 | 337 | 0.0059 | 43 | c.85- others(60): Show |
COL4A1 | ENSG00000187498.16 | transcript | ENST00000375820.10 | protein_coding | 1/51 | chr13 | TogoVar | |||||||
COL4A2_chr13_110302284_110518209 | 110457135 | T | TCCGTGGG others(36): Show |
intron_variant | MODIFIER | NA19007.hp1 | a0001 | a0001c0005 | a0001c0005t0001 | a0001c0005t0001g0182 | 1 | 288 | 0.0035 | 43 | c.134 others(60): Show |
COL4A2 | ENSG00000134871.19 | transcript | ENST00000360467.7 | protein_coding | 20/47 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | ||||||
COL4A2_chr13_110302284_110518209 | 110497505 | A | ATCCACCA others(36): Show |
intron_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00280.hp1 others(166): Show |
a0001a0002a0003others(10): Show | a0001c0001a0001c0002a0001c0003others(58): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(112): Show | a0001c0001t0001g0153 a0001c0001t0001g0195 a0001c0001t0002g0307 others(165): Show |
169 | 369 | 0.4580 | 43 | c.376 others(62): Show |
COL4A2 | ENSG00000134871.19 | transcript | ENST00000360467.7 | protein_coding | 40/47 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | ||||||
COL4A3_chr2_227159624_227319792 | 227249230 | A | ATATATAT others(36): Show |
intron_variant | MODIFIER | HG02015.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0306 | 1 | 56 | 0.0179 | 43 | c.546 others(58): Show |
COL4A3 | ENSG00000169031.21 | transcript | ENST00000396578.8 | protein_coding | 9/51 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
COL5A1_chr9_134636803_134849843 | 134679447 | T | TGGGGGCA others(36): Show |
intron_variant | MODIFIER | HG02280.hp1 HG02976.hp2 |
a0001 | a0001c0006a0001c0031 | a0001c0006t0048a0001c0031t0006 | a0001c0006t0048g0047 a0001c0031t0006g0048 |
2 | 262 | 0.0076 | 43 | c.110 others(62): Show |
COL5A1 | ENSG00000130635.17 | transcript | ENST00000371817.8 | protein_coding | 1/65 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | ||||||
COL6A1_chr21_45976770_46010048 | 45977311 | C | CTCCCACC others(36): Show |
upstream_gene_variant | MODIFIER | HG00280.hp1 HG00280.hp2 HG00323.hp2 others(113): Show |
a0001a0002a0003others(16): Show | a0001c0001a0001c0003a0001c0007others(32): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(46): Show | a0001c0001t0001g0067 a0001c0001t0002g0003 a0001c0001t0002g0004 others(112): Show |
116 | 118 | 0.9831 | 43 | c.-45 others(54): Show |
COL6A1 | ENSG00000142156.16 | transcript | ENST00000361866.8 | protein_coding | 4458 | chr21 | TogoVar | |||||||
COL6A1_chr21_45976770_46010048 | 45977321 | C | CTCCCCCT others(36): Show |
upstream_gene_variant | MODIFIER | HG01978.hp1 | a0006 | a0006c0011 | a0006c0011t0002 | a0006c0011t0002g0097 | 1 | 126 | 0.0079 | 43 | c.-45 others(54): Show |
COL6A1 | ENSG00000142156.16 | transcript | ENST00000361866.8 | protein_coding | 4448 | chr21 | TogoVar | |||||||
COL6A1_chr21_45976770_46010048 | 45981618 | T | TCCCGCCC others(36): Show |
upstream_gene_variant | MODIFIER | NA19004.hp2 | a0001 | a0001c0021 | a0001c0021t0002 | a0001c0021t0002g0093 | 1 | 96 | 0.0104 | 43 | c.-23 others(52): Show |
COL6A1 | ENSG00000142156.16 | transcript | ENST00000361866.8 | protein_coding | 151 | chr21 | TogoVar | |||||||
COL6A6_chr3_130512177_130682042 | 130636912 | T | TCCCCTCC others(36): Show |
intron_variant | MODIFIER | HG02572.hp1 HG02615.hp1 HG03453.hp2 |
a0023a0031 | a0023c0030a0031c0077 | a0023c0030t0001a0023c0030t0004a0031c0077t0001 | a0023c0030t0001g0155 a0023c0030t0004g0103 a0031c0077t0001g0147 |
3 | 159 | 0.0189 | 43 | c.509 others(62): Show |
COL6A6 | ENSG00000206384.11 | transcript | ENST00000358511.11 | protein_coding | 28/36 | INFO_REALIGN_3_PRIME | chr3 | TogoVar |