Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
HMCES_chr3_129273870_129311186	129284532	G G	GCAGTTCA others(38): Show GCAGTTCAGTACTCAAAGCAACTTTATGAAATCTAACTACTGCAAA	intron_variant intron_variant	MODIFIER	NA19059.hp2 NA19059.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0199 a0001c0001t0001g0199	1	340	0.0029	45	c.184 others(62): Show c.184-4321_184-4277dupCAGTTCAGTACTCAAAGCAACTTTATGA AATCTAACTACTGCAAA	HMCES	ENSG00000183624.14	transcript	ENST00000383463.9	protein_coding	2/6		INFO_REALIGN_3_PRIME	chr3	TogoVar
HMMR_chr5_163455632_163496941	163494876	C C	CTTTTTTT others(38): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02523.hp2 HG02523.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0003 a0003c0003t0001g0003	1	406	0.0025	45	c.37 others(56): Show c.3712_*3713insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT TTTTTTTTTTT	HMMR	ENSG00000072571.20	transcript	ENST00000393915.9	protein_coding		2936		chr5	TogoVar
HMOX1_chr22_35376096_35399207	35389395	C C	CCTTCCTT others(38): Show CCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCCTTT	intron_variant intron_variant	MODIFIER	NA19064.hp2 NA19064.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0095 a0001c0001t0001g0095	1	384	0.0026	45	c.637 others(60): Show c.637-466_637-465insCCTTCCTTCCTTCCTTCCTTCCTTCCTTTC TTTCTTTCCTTTCTT	HMOX1	ENSG00000100292.18	transcript	ENST00000216117.9	protein_coding	3/4		INFO_REALIGN_3_PRIME	chr22	TogoVar
HOMER2_chr15_82843983_82957720	82868541	A A	ATATATAT others(38): Show ATATATATATATATATATATATATATATATATATATATATTTTTTT	intron_variant intron_variant	MODIFIER	HG02486.hp1 HG02486.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0162 a0001c0001t0001g0162	1	348	0.0029	45	c.295 others(62): Show c.295-4283_295-4282insAAAAAAATATATATATATATATATATAT ATATATATATATATATA	HOMER2	ENSG00000103942.13	transcript	ENST00000450735.7	protein_coding	3/8			chr15	TogoVar
HOMER2_chr15_82843983_82957720	82868541	A A	ATATATAT others(38): Show ATATATATATATATATATATATATATATATATATATTTTTTTTTTT	intron_variant intron_variant	MODIFIER	homoSapiens_chm13v2.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0163 a0001c0001t0001g0163	1	348	0.0029	45	c.295 others(62): Show c.295-4283_295-4282insAAAAAAAAAAATATATATATATATATAT ATATATATATATATATA	HOMER2	ENSG00000103942.13	transcript	ENST00000450735.7	protein_coding	3/8			chr15	TogoVar
HOMER2_chr15_82843983_82957720	82868541	A A	ATATATAT others(38): Show ATATATATATATATATATATATATATATATATTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03490.hp2 HG03492.hp2 HG03490.hp2 HG03492.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0003 a0001c0003t0003	a0001c0003t0003g0008 a0001c0003t0003g0009 a0001c0003t0003g0008 a0001c0003t0003g0009	2	348	0.0058	45	c.295 others(62): Show c.295-4283_295-4282insAAAAAAAAAAAAAAATATATATATATAT ATATATATATATATATA	HOMER2	ENSG00000103942.13	transcript	ENST00000450735.7	protein_coding	3/8			chr15	TogoVar
HOMEZ_chr14_23267422_23291132	23280740	A A	ATTATTTT others(38): Show ATTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATT	intron_variant intron_variant	MODIFIER	HG02135.hp2 HG02135.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0244 a0002c0002t0002g0244	1	394	0.0025	45	c.41- others(60): Show c.41-3598_41-3554dupAATAAAATAAAATAAAATAAAATAAAATAA AATAAAATAAAATAA	HOMEZ	ENSG00000290292.10	transcript	ENST00000357460.7	protein_coding	1/1			chr14	TogoVar
HOPX_chr4_56642998_56686296	56685885	T T	TTATTATA others(38): Show TTATTATATATAATGTATTATATTGTATTATTATATAATTGTATTA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18965.hp1 NA18965.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0307 a0001c0001t0001g0307	1	376	0.0027	45	c.-47 others(56): Show c.-4715_-4714insTAATACAATTATATAATAATACAATATAATACAT TATATATAATA	HOPX	ENSG00000171476.23	transcript	ENST00000420433.6	protein_coding		4590		chr4	TogoVar
HOXC8_chr12_54003985_54017769	54014000	T T	TTCTCTTC others(38): Show TTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTTCTCTCTCTCTC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01106.hp1 HG01106.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0001 a0001c0001t0007g0001	1	306	0.0033	45	c.26 others(56): Show c.2619_*2620insTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTT CTCTCTCTCTC	HOXC8	ENSG00000037965.6	transcript	ENST00000040584.6	protein_coding		1232		chr12	TogoVar
HRH3_chr20_62209960_62225278	62212985	G G	GGGTGGGG others(38): Show GGGTGGGGGAAGGAGAGCGGGGATGGGGGGTAAGGAGAGCGGGGAT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18975.hp2 NA18975.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0042 a0001c0001t0007g0042	1	368	0.0027	45	c.30 others(56): Show c.3020_*3021insATCCCCGCTCTCCTTACCCCCCATCCCCGCTCTC CTTCCCCCACC	HRH3	ENSG00000101180.17	transcript	ENST00000340177.10	protein_coding		1974		chr20	TogoVar
HRH3_chr20_62209960_62225278	62213500	G G	GGGGAAGG others(38): Show GGGGAAGGGAGAGCAGGGATGGGGGGGAAGGAGAGTGGGGATGGGT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01243.hp2 HG02273.hp2 NA18747.hp2 others(4): Show HG01243.hp2 HG02273.hp2 NA18747.hp2 NA18964.hp2 NA18965.hp1 NA18967.hp2 NA18973.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0001 a0001c0002t0001g0002 a0001c0002t0001g0006 a0001c0001t0001g0001 a0001c0002t0001g0002 a0001c0002t0001g0006	7	368	0.0190	45	c.25 others(56): Show c.2505_*2506insACCCATCCCCACTCTCCTTCCCCCCCATCCCTGC TCTCCCTTCCC	HRH3	ENSG00000101180.17	transcript	ENST00000340177.10	protein_coding		1459		chr20	TogoVar
HSPA12A_chr10_116666192_116747566	116744381	T T	TGATCCAG others(38): Show TGATCCAGGCATCAAGCACCAGTTCTCATGTCCTTTGTTCCAACCA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18940.hp1 NA18940.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0012 a0001c0001t0012	a0001c0001t0012g0047 a0001c0001t0012g0047	1	320	0.0031	45	c.-19 others(56): Show c.-1913_-1912insTGGTTGGAACAAAGGACATGAGAACTGGTGCTTG ATGCCTGGATC	HSPA12A	ENSG00000165868.16	transcript	ENST00000369209.8	protein_coding		1816		chr10	TogoVar
HTR3B_chr11_113899796_113954079	113926468	T T	TTTTCCTT others(38): Show TTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCC	intron_variant intron_variant	MODIFIER	NA18954.hp2 NA18979.hp1 NA18954.hp2 NA18979.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0044 a0001c0001t0005g0062 a0001c0001t0005g0044 a0001c0001t0005g0062	2	418	0.0048	45	c.214 others(62): Show c.214-4892_214-4848dupCCTTTCCTTTCCTTTCCTTTCCTTTCCT TTCCTTTCCTTTCCTTT	HTR3B	ENSG00000149305.8	transcript	ENST00000260191.8	protein_coding	2/8		INFO_REALIGN_3_PRIME	chr11	TogoVar
HTT_chr4_3069681_3248957	3169022	C C	CTTTCTTT others(38): Show CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT	intron_variant intron_variant	MODIFIER	HG03579.hp1 HG03579.hp1	a0075 a0075	a0075c0094 a0075c0094	a0075c0094t0003 a0075c0094t0003	a0075c0094t0003g0064 a0075c0094t0003g0064	1	294	0.0034	45	c.386 others(64): Show c.3865-3295_3865-3294insCTTTCTTTCTTTCTTTCTTTCTTTCT TTCTTTCTTTCTTTCTTTT	HTT	ENSG00000197386.14	transcript	ENST00000355072.11	protein_coding	29/66		INFO_REALIGN_3_PRIME	chr4	TogoVar
ICMT_chr1_6216193_6240964	6230203	C C	CTCCCAGG others(38): Show CTCCCAGGTTCAAGCGGTTCTCAGGTCTCAGCCTCCCGAGTAGCTG	intron_variant intron_variant	MODIFIER	HG03490.hp2 HG03490.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0083 a0001c0001t0001g0083	1	352	0.0028	45	c.672 others(62): Show c.672+1654_672+1698dupCAGCTACTCGGGAGGCTGAGACCTGAGA ACCGCTTGAACCTGGGA	ICMT	ENSG00000116237.16	transcript	ENST00000343813.10	protein_coding	4/4			chr1	TogoVar
IDO2_chr8_39929651_40021392	39995251	C C	CCTTCTCC others(38): Show CCTTCTCCTTCTCCTTCTCCTTCTCCTTCTTCTTCTTCTTCTTCTT	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG01891.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0096 a0002c0002t0001g0096	1	360	0.0028	45	c.667 others(62): Show c.667+5418_667+5419insCCTTCTCCTTCTCCTTCTCCTTCTTCTT CTTCTTCTTCTTCTTCT	IDO2	ENSG00000188676.15	transcript	ENST00000502986.4	protein_coding	8/10		INFO_REALIGN_3_PRIME	chr8	TogoVar
IDO2_chr8_39929651_40021392	39995251	C C	CCTTCTCC others(38): Show CCTTCTCCTTCTCCTTCTCCTTCTTCTTCTTCTTCTTCTTCTTCTT	intron_variant intron_variant	MODIFIER	HG02735.hp1 HG02735.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0008 a0002c0002t0008	a0002c0002t0008g0016 a0002c0002t0008g0016	1	360	0.0028	45	c.667 others(62): Show c.667+5418_667+5419insCCTTCTCCTTCTCCTTCTTCTTCTTCTT CTTCTTCTTCTTCTTCT	IDO2	ENSG00000188676.15	transcript	ENST00000502986.4	protein_coding	8/10		INFO_REALIGN_3_PRIME	chr8	TogoVar
IDO2_chr8_39929651_40021392	39995251	C C	CCTTCTCC others(38): Show CCTTCTCCTTCTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT	intron_variant intron_variant	MODIFIER	NA18522.hp1 NA18962.hp1 NA19005.hp2 others(1): Show NA18522.hp1 NA18962.hp1 NA19005.hp2 NA19091.hp2	a0002 a0005 a0002 a0005	a0002c0002 a0005c0005 a0002c0002 a0005c0005	a0002c0002t0001 a0002c0002t0007 a0005c0005t0002 a0002c0002t0001 a0002c0002t0007 a0005c0005t0002	a0002c0002t0001g0205 a0002c0002t0001g0326 a0002c0002t0007g0272 others(1): Show a0002c0002t0001g0205 a0002c0002t0001g0326 a0002c0002t0007g0272 a0005c0005t0002g0039	4	360	0.0111	45	c.667 others(62): Show c.667+5418_667+5419insCCTTCTCCTTCTTCTTCTTCTTCTTCTT CTTCTTCTTCTTCTTCT	IDO2	ENSG00000188676.15	transcript	ENST00000502986.4	protein_coding	8/10		INFO_REALIGN_3_PRIME	chr8	TogoVar
IDO2_chr8_39929651_40021392	39995251	C C	CCTTCTCC others(38): Show CCTTCTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT	intron_variant intron_variant	MODIFIER	HG02922.hp1 HG02922.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0024 a0002c0002t0024	a0002c0002t0024g0169 a0002c0002t0024g0169	1	360	0.0028	45	c.667 others(62): Show c.667+5418_667+5419insCCTTCTTCTTCTTCTTCTTCTTCTTCTT CTTCTTCTTCTTCTTCT	IDO2	ENSG00000188676.15	transcript	ENST00000502986.4	protein_coding	8/10		INFO_REALIGN_3_PRIME	chr8	TogoVar
IFNAR1_chr21_33319970_33364864	33322442	A A	AATATATA others(38): Show AATATATATATGGAATATATATATATGGAATATATATATATGGTAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00741.hp1 HG00741.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0016 a0002c0002t0016	a0002c0002t0016g0224 a0002c0002t0016g0224	1	323	0.0031	45	c.-26 others(56): Show c.-2614_-2613insATATATATATGGAATATATATATATGGAATATAT ATATATGGTAT	IFNAR1	ENSG00000142166.15	transcript	ENST00000270139.8	protein_coding		2527		chr21	TogoVar
IFNAR1_chr21_33319970_33364864	33322753	T T	TGGAATAT others(38): Show TGGAATATATACGTATGGAATATATATATGGAATATATACGTATGG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02698.hp2 HG02698.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0001 a0002c0002t0002g0001	1	323	0.0031	45	c.-23 others(56): Show c.-2303_-2302insGGAATATATACGTATGGAATATATATATGGAATA TATACGTATGG	IFNAR1	ENSG00000142166.15	transcript	ENST00000270139.8	protein_coding		2216		chr21	TogoVar
IFNAR1_chr21_33319970_33364864	33323511	A A	AATATATA others(38): Show AATATATATATGGAATATATATATATGGAATATATATATGGAATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03017.hp1 NA18967.hp2 HG03017.hp1 NA18967.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0171 a0001c0001t0003g0182 a0001c0001t0003g0171 a0001c0001t0003g0182	2	323	0.0062	45	c.-15 others(56): Show c.-1545_-1544insATATATATATGGAATATATATATATGGAATATAT ATATGGAATAT	IFNAR1	ENSG00000142166.15	transcript	ENST00000270139.8	protein_coding		1458		chr21	TogoVar
IFNAR1_chr21_33319970_33364864	33323565	T T	TATATGGA others(38): Show TATATGGAATATATAGAGATGGAATATATATATGGAATATATAGAG	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18945.hp2 NA18953.hp2 NA18945.hp2 NA18953.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0006 a0002c0002t0002g0006	2	323	0.0062	45	c.-14 others(56): Show c.-1491_-1490insATATGGAATATATAGAGATGGAATATATATATGG AATATATAGAG	IFNAR1	ENSG00000142166.15	transcript	ENST00000270139.8	protein_coding		1404		chr21	TogoVar
IFT74_chr9_26951412_27071134	27011387	C C	CGTGTATG others(38): Show CGTGTATGTATGTGTACATGTGAACCATATTTATATTTACATATAT	intron_variant intron_variant	MODIFIER	HG01175.hp1 NA20300.hp2 HG01175.hp1 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0276 a0001c0001t0003g0277 a0001c0001t0003g0276 a0001c0001t0003g0277	2	342	0.0059	45	c.727 others(60): Show c.727-504_727-460dupACATGTGAACCATATTTATATTTACATATA TGTGTATGTATGTGT	IFT74	ENSG00000096872.17	transcript	ENST00000380062.10	protein_coding	9/19		INFO_REALIGN_3_PRIME	chr9	TogoVar
IFTAP_chr11_36589502_36664272	36661259	C C	CTATATAT others(38): Show CTATATATATATATATATATATATATATATATATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19077.hp1 NA19077.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0003	1	358	0.0028	45	c.20 others(56): Show c.2073_*2074insTATATATATATATATATATATATATATATATATA TATATATATAT	IFTAP	ENSG00000166352.18	transcript	ENST00000334307.10	protein_coding		1988		chr11	TogoVar
IGF1_chr12_102390874_102485563	102441906	G G	GCTGCTGC others(38): Show GCTGCTGCTGCTGCTGCTGCTTCTTCTTCTTCTTCTTCTTCTTCTT	intron_variant intron_variant	MODIFIER	HG02572.hp2 HG02717.hp2 HG02572.hp2 HG02717.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0017 a0001c0001t0002g0027 a0001c0001t0002g0017 a0001c0001t0002g0027	2	360	0.0056	45	c.221 others(64): Show c.221-22217_221-22216insAAGAAGAAGAAGAAGAAGAAGAAGAA GCAGCAGCAGCAGCAGCAG	IGF1	ENSG00000017427.17	transcript	ENST00000337514.11	protein_coding	2/3			chr12	TogoVar
IGF1_chr12_102390874_102485563	102441906	G G	GCTGCTGC others(38): Show GCTGCTGCTGCTGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT	intron_variant intron_variant	MODIFIER	HG02280.hp1 HG03139.hp1 NA18986.hp1 HG02280.hp1 HG03139.hp1 NA18986.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0012 a0001c0001t0073 a0001c0002t0079 a0001c0001t0012 a0001c0001t0073 a0001c0002t0079	a0001c0001t0012g0039 a0001c0001t0073g0065 a0001c0002t0079g0147 a0001c0001t0012g0039 a0001c0001t0073g0065 a0001c0002t0079g0147	3	360	0.0083	45	c.221 others(64): Show c.221-22217_221-22216insAAGAAGAAGAAGAAGAAGAAGAAGAA GAAGAAGCAGCAGCAGCAG	IGF1	ENSG00000017427.17	transcript	ENST00000337514.11	protein_coding	2/3			chr12	TogoVar
IGF1_chr12_102390874_102485563	102441906	G G	GCTGCTGC others(38): Show GCTGCTGCTGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG03041.hp1 NA18979.hp1 others(2): Show HG02486.hp2 HG03041.hp1 NA18979.hp1 NA18988.hp2 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0022 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0022 a0001c0001t0042 a0001c0001t0082	a0001c0001t0001g0293 a0001c0001t0002g0036 a0001c0001t0022g0020 others(2): Show a0001c0001t0001g0293 a0001c0001t0002g0036 a0001c0001t0022g0020 a0001c0001t0042g0241 a0001c0001t0082g0185	5	360	0.0139	45	c.221 others(64): Show c.221-22217_221-22216insAAGAAGAAGAAGAAGAAGAAGAAGAA GAAGAAGAAGCAGCAGCAG	IGF1	ENSG00000017427.17	transcript	ENST00000337514.11	protein_coding	2/3			chr12	TogoVar
IGF1_chr12_102390874_102485563	102441906	G G	GCTGCTGC others(38): Show GCTGCTGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT	intron_variant intron_variant	MODIFIER	HG01516.hp1 HG02647.hp1 HG03017.hp2 others(2): Show HG01516.hp1 HG02647.hp1 HG03017.hp2 NA18983.hp2 NA19068.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0025 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0025 a0001c0001t0047	a0001c0001t0001g0086 a0001c0001t0001g0091 a0001c0001t0002g0053 others(2): Show a0001c0001t0001g0086 a0001c0001t0001g0091 a0001c0001t0002g0053 a0001c0001t0025g0087 a0001c0001t0047g0344	5	360	0.0139	45	c.221 others(64): Show c.221-22217_221-22216insAAGAAGAAGAAGAAGAAGAAGAAGAA GAAGAAGAAGAAGCAGCAG	IGF1	ENSG00000017427.17	transcript	ENST00000337514.11	protein_coding	2/3			chr12	TogoVar
IGF1_chr12_102390874_102485563	102441906	G G	GCTGCTTC others(38): Show GCTGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT	intron_variant intron_variant	MODIFIER	HG02129.hp1 HG02129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0032 a0001c0001t0032	a0001c0001t0032g0252 a0001c0001t0032g0252	1	360	0.0028	45	c.221 others(64): Show c.221-22217_221-22216insAAGAAGAAGAAGAAGAAGAAGAAGAA GAAGAAGAAGAAGAAGCAG	IGF1	ENSG00000017427.17	transcript	ENST00000337514.11	protein_coding	2/3			chr12	TogoVar
IGF1_chr12_102390874_102485563	102441906	G G	GCTTCTTC others(38): Show GCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT	intron_variant intron_variant	MODIFIER	HG02129.hp2 HG04115.hp2 NA18960.hp1 HG02129.hp2 HG04115.hp2 NA18960.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0018 a0001c0001t0004 a0001c0001t0018	a0001c0001t0004g0302 a0001c0001t0004g0313 a0001c0001t0018g0298 a0001c0001t0004g0302 a0001c0001t0004g0313 a0001c0001t0018g0298	3	360	0.0083	45	c.221 others(64): Show c.221-22217_221-22216insAAGAAGAAGAAGAAGAAGAAGAAGAA GAAGAAGAAGAAGAAGAAG	IGF1	ENSG00000017427.17	transcript	ENST00000337514.11	protein_coding	2/3			chr12	TogoVar
IGSF21_chr1_18102798_18383483	18359393	A A	AGGAAGGA others(38): Show AGGAAGGAAGGAAGGAAGGAAGGAAAAGAGAAAGAAAGAAAGAAAG	intron_variant intron_variant	MODIFIER	HG01175.hp2 HG01175.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0022 a0001c0001t0002g0022	1	248	0.0040	45	c.425 others(62): Show c.425-2698_425-2697insAAGAGAAAGAAAGAAAGAAAGGGAAGGA AGGAAGGAAGGAAGGAA	IGSF21	ENSG00000117154.12	transcript	ENST00000251296.4	protein_coding	4/9		INFO_REALIGN_3_PRIME	chr1	TogoVar
IHO1_chr3_49194498_49263106	49200494	A A	AGGAAGGA others(38): Show AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAG	intron_variant intron_variant	MODIFIER	HG02735.hp1 NA19065.hp1 HG02735.hp1 NA19065.hp1	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0002 a0002c0004t0002	a0002c0004t0002g0010 a0002c0004t0002g0011 a0002c0004t0002g0010 a0002c0004t0002g0011	2	196	0.0102	45	c.-16 others(60): Show c.-16+922_-16+923insGAAGGAAGGAAGGAAGGAAGGAAGGAAGGA AGGAAGGAAGGAAGG	IHO1	ENSG00000173421.17	transcript	ENST00000452691.7	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr3	TogoVar
IHO1_chr3_49194498_49263106	49200498	A A	AGGAAGGA others(38): Show AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAG	intron_variant intron_variant	MODIFIER	NA19090.hp2 NA19090.hp2	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0002 a0002c0004t0002	a0002c0004t0002g0006 a0002c0004t0002g0006	1	196	0.0051	45	c.-16 others(60): Show c.-16+926_-16+927insGAAGGAAGGAAGGAAGGAAGGAAGGAAGGA AGGAAGGAAGGAAGG	IHO1	ENSG00000173421.17	transcript	ENST00000452691.7	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr3	TogoVar
IK_chr5_140642829_140667480	140648007	G G	GTGTGTGT others(38): Show GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG03579.hp1 HG03579.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0171 a0001c0001t0004g0171	1	380	0.0026	45	c.16+ others(56): Show c.16+83_16+84insTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG TGTGTGTGTGT	IK	ENSG00000113141.19	transcript	ENST00000417647.7	protein_coding	1/19			chr5	TogoVar
IK_chr5_140642829_140667480	140660292	C C	CTTTTTTT others(38): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG01891.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0157 a0001c0001t0001g0157	1	380	0.0026	45	c.135 others(62): Show c.1355+119_1355+120insTTTTTTTTTTTTTTTTTTTTTTTTTTTT TTTTTTTTTTTTTTTTT	IK	ENSG00000113141.19	transcript	ENST00000417647.7	protein_coding	15/19		INFO_REALIGN_3_PRIME	chr5	TogoVar
IL10_chr1_206762602_206777494	206762852	C C	CTCCTTTC others(38): Show CTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01978.hp2 HG02109.hp1 NA18941.hp2 others(7): Show HG01978.hp2 HG02109.hp1 NA18941.hp2 NA18942.hp2 NA18947.hp2 NA18956.hp2 NA18989.hp1 NA19085.hp1 NA19085.hp2 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0010 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0010 a0001c0002t0002	a0001c0001t0001g0008 a0001c0001t0002g0007 a0001c0001t0002g0018 others(2): Show a0001c0001t0001g0008 a0001c0001t0002g0007 a0001c0001t0002g0018 a0001c0001t0010g0029 a0001c0002t0002g0047	10	452	0.0221	45	c.57 others(56): Show c.5783_*5784insAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGG AAAGGAAAGGA	IL10	ENSG00000136634.7	transcript	ENST00000423557.1	protein_coding		4749		chr1	TogoVar
IL16_chr15_81191879_81319058	81243163	A A	ATATATAT others(38): Show ATATATATATATACATATATATATATATATATATATATATATTTTT	intron_variant intron_variant	MODIFIER	NA19066.hp1 NA19066.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0043 a0001c0002t0043	a0001c0002t0043g0264 a0001c0002t0043g0264	1	342	0.0029	45	c.313 others(64): Show c.313-16608_313-16607insATATATATATACATATATATATATAT ATATATATATATATTTTTT	IL16	ENSG00000172349.19	transcript	ENST00000683961.1	protein_coding	2/18		INFO_REALIGN_3_PRIME	chr15	TogoVar
IL17B_chr5_149369267_149384292	149370033	T T	TTTTTTTT others(38): Show TTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01070.hp1 HG03654.hp2 HG01070.hp1 HG03654.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	2	386	0.0052	45	c.43 others(56): Show c.4335_*4336insGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAA AAAAAAAAAAA	IL17B	ENSG00000127743.6	transcript	ENST00000261796.4	protein_coding		4233		chr5	TogoVar
IL1RAPL2_chrX_104561199_105772829	105307524	T T	TTATATAA others(38): Show TTATATAATATATATATTTTATATTATATATATTATATATAATATA	intron_variant intron_variant	MODIFIER	HG03130.hp1 HG03471.hp1 HG03486.hp2 HG03130.hp1 HG03471.hp1 HG03486.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0006 a0001c0002t0001 a0001c0001t0001 a0001c0001t0006 a0001c0002t0001	a0001c0001t0001g0065 a0001c0001t0006g0134 a0001c0002t0001g0132 a0001c0001t0001g0065 a0001c0001t0006g0134 a0001c0002t0001g0132	3	141	0.0213	45	c.697 others(64): Show c.697+39988_697+39989insAATATATATATTTTATATTATATATA TTATATATAATATATATAT	IL1RAPL2	ENSG00000189108.14	transcript	ENST00000372582.6	protein_coding	5/10		INFO_REALIGN_3_PRIME	chrX	TogoVar
IL31RA_chr5_55846357_55927850	55897000	A A	AAAAAAAA others(38): Show AAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02735.hp2 HG03225.hp1 HG02735.hp2 HG03225.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0053 a0001c0001t0009 a0001c0001t0053	a0001c0001t0009g0267 a0001c0001t0053g0276 a0001c0001t0009g0267 a0001c0001t0053g0276	2	322	0.0062	45	c.852 others(60): Show c.852+572_852+573insAAAAAAAAAAAAAAAAAAAAATATATATAT ATATATATATATATA	IL31RA	ENSG00000164509.16	transcript	ENST00000652347.2	protein_coding	7/14		INFO_REALIGN_3_PRIME	chr5	TogoVar
IL31RA_chr5_55846357_55927850	55897000	A A	AAAAAAAA others(38): Show AAAAAAAAAAAAAAAAATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03942.hp2 HG03942.hp2	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0004 a0001c0007t0004	a0001c0007t0004g0168 a0001c0007t0004g0168	1	322	0.0031	45	c.852 others(60): Show c.852+572_852+573insAAAAAAAAAAAAAAATATATATATATATAT ATATATATATATATA	IL31RA	ENSG00000164509.16	transcript	ENST00000652347.2	protein_coding	7/14		INFO_REALIGN_3_PRIME	chr5	TogoVar
IL31RA_chr5_55846357_55927850	55897015	A A	ATATATAT others(38): Show ATATATATATATATATATATATATATATATATTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG00735.hp1	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0011 a0001c0005t0011	a0001c0005t0011g0118 a0001c0005t0011g0118	1	322	0.0031	45	c.852 others(60): Show c.852+587_852+588insATATATATATATATATATATATATATATAT TTTTTTTTTTTTTTT	IL31RA	ENSG00000164509.16	transcript	ENST00000652347.2	protein_coding	7/14		INFO_REALIGN_3_PRIME	chr5	TogoVar
IL31RA_chr5_55846357_55927850	55897015	A A	ATATATAT others(38): Show ATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18953.hp2 NA18964.hp1 NA19056.hp2 NA18953.hp2 NA18964.hp1 NA19056.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0055 a0002c0002t0001g0074 a0002c0002t0001g0136 a0002c0002t0001g0055 a0002c0002t0001g0074 a0002c0002t0001g0136	3	322	0.0093	45	c.852 others(60): Show c.852+587_852+588insATATATATATATATATATATATATATATTT TTTTTTTTTTTTTTT	IL31RA	ENSG00000164509.16	transcript	ENST00000652347.2	protein_coding	7/14		INFO_REALIGN_3_PRIME	chr5	TogoVar
IL31RA_chr5_55846357_55927850	55897015	A A	ATATATAT others(38): Show ATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02083.hp2 NA18947.hp1 HG02083.hp2 NA18947.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0005 a0002c0002t0001 a0002c0002t0005	a0002c0002t0001g0049 a0002c0002t0005g0091 a0002c0002t0001g0049 a0002c0002t0005g0091	2	322	0.0062	45	c.852 others(60): Show c.852+587_852+588insATATATATATATATATATATATATATTTTT TTTTTTTTTTTTTTT	IL31RA	ENSG00000164509.16	transcript	ENST00000652347.2	protein_coding	7/14		INFO_REALIGN_3_PRIME	chr5	TogoVar
IL31RA_chr5_55846357_55927850	55897015	A A	ATATATAT others(38): Show ATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02647.hp2 HG03540.hp2 HG02647.hp2 HG03540.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0016 a0002c0002t0075 a0002c0002t0016 a0002c0002t0075	a0002c0002t0016g0061 a0002c0002t0075g0031 a0002c0002t0016g0061 a0002c0002t0075g0031	2	322	0.0062	45	c.852 others(60): Show c.852+587_852+588insATATATATATATATATATATATATTTTTTT TTTTTTTTTTTTTTT	IL31RA	ENSG00000164509.16	transcript	ENST00000652347.2	protein_coding	7/14		INFO_REALIGN_3_PRIME	chr5	TogoVar
IL31RA_chr5_55846357_55927850	55897015	A A	ATATATAT others(38): Show ATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03490.hp2 NA20905.hp1 HG03490.hp2 NA20905.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0070 a0002c0002t0001g0147 a0002c0002t0001g0070 a0002c0002t0001g0147	2	322	0.0062	45	c.852 others(60): Show c.852+587_852+588insATATATATATATATATATATATTTTTTTTT TTTTTTTTTTTTTTT	IL31RA	ENSG00000164509.16	transcript	ENST00000652347.2	protein_coding	7/14		INFO_REALIGN_3_PRIME	chr5	TogoVar
IL31RA_chr5_55846357_55927850	55897015	A A	ATATATAT others(38): Show ATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18999.hp2 NA19004.hp1 NA18999.hp2 NA19004.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0084 a0002c0002t0001g0087 a0002c0002t0001g0084 a0002c0002t0001g0087	2	322	0.0062	45	c.852 others(60): Show c.852+587_852+588insATATATATATATATATATATTTTTTTTTTT TTTTTTTTTTTTTTT	IL31RA	ENSG00000164509.16	transcript	ENST00000652347.2	protein_coding	7/14		INFO_REALIGN_3_PRIME	chr5	TogoVar
IL34_chr16_70641559_70665682	70660839	G G	GGCCCAGC others(38): Show GGCCCAGCCCGGCCCAGCCCGGCCCAGCCCAGCCCAGCCCAGCCCA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02083.hp1 NA18986.hp2 HG02083.hp1 NA18986.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0004 a0001c0001t0003g0191 a0001c0001t0001g0004 a0001c0001t0003g0191	2	438	0.0046	45	c.65 others(54): Show c.652_*653insGCCCAGCCCGGCCCAGCCCGGCCCAGCCCAGCCCAG CCCAGCCCA	IL34	ENSG00000157368.12	transcript	ENST00000288098.7	protein_coding		158		chr16	TogoVar
IL36B_chr2_113017089_113057867	113017625	G G	GGAAGAAG others(38): Show GGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00558.hp1 HG01168.hp1 HG01261.hp1 others(6): Show HG00558.hp1 HG01168.hp1 HG01261.hp1 HG02148.hp2 NA18947.hp1 NA18956.hp1 NA18971.hp1 NA18983.hp2 NA19079.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0002 a0001c0001t0002g0012 a0001c0001t0002g0061 others(5): Show a0001c0001t0002g0002 a0001c0001t0002g0012 a0001c0001t0002g0061 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0158 a0001c0001t0002g0163 a0001c0001t0002g0235	9	404	0.0223	45	c.50 others(56): Show c.5048_*5049insTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT TCTTCTTCTTC	IL36B	ENSG00000136696.11	transcript	ENST00000259213.9	protein_coding		4463		chr2	TogoVar

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