Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
LMF1_chr16_848634_975984	858595	T T	TGTCTCGG others(38): Show TGTCTCGGGACGGGTGTGAGTGGTGTCACGGGACGGGTGTGCAGTG	intron_variant intron_variant	MODIFIER	HG02132.hp1 HG02132.hp1	a0017 a0017	a0017c0065 a0017c0065	a0017c0065t0001 a0017c0065t0001	a0017c0065t0001g0138 a0017c0065t0001g0138	1	292	0.0034	45	c.153 others(64): Show c.1530-3890_1530-3889insCACTGCACACCCGTCCCGTGACACCA CTCACACCCGTCCCGAGAC	LMF1	ENSG00000103227.19	transcript	ENST00000262301.16	protein_coding	10/10			chr16	TogoVar
LMF1_chr16_848634_975984	859247	C C	CAGTGGTC others(38): Show CAGTGGTCTCGGGACGGGTGTGCAGTGGTGTCTCGGGACGGGTGTG	intron_variant intron_variant	MODIFIER	HG02132.hp1 NA18970.hp2 NA19002.hp1 HG02132.hp1 NA18970.hp2 NA19002.hp1	a0001 a0017 a0001 a0017	a0001c0001 a0017c0065 a0001c0001 a0017c0065	a0001c0001t0001 a0017c0065t0001 a0001c0001t0001 a0017c0065t0001	a0001c0001t0001g0183 a0001c0001t0001g0257 a0017c0065t0001g0138 a0001c0001t0001g0183 a0001c0001t0001g0257 a0017c0065t0001g0138	3	282	0.0106	45	c.153 others(64): Show c.1530-4542_1530-4541insCACACCCGTCCCGAGACACCACTGCA CACCCGTCCCGAGACCACT	LMF1	ENSG00000103227.19	transcript	ENST00000262301.16	protein_coding	10/10			chr16	TogoVar
LMF1_chr16_848634_975984	859600	G G	GAGTGGTG others(38): Show GAGTGGTGTCACGGGACGGGTGTGAGTGGTGTCTCGGGACGGGTGT	intron_variant intron_variant	MODIFIER	HG01069.hp1 HG01071.hp2 HG01884.hp2 others(4): Show HG01069.hp1 HG01071.hp2 HG01884.hp2 HG02723.hp1 HG03139.hp2 HG03195.hp2 HG03453.hp2	a0001 a0003 a0010 a0001 a0003 a0010	a0001c0001 a0001c0002 a0001c0006 others(2): Show a0001c0001 a0001c0002 a0001c0006 a0003c0030 a0010c0039	a0001c0001t0002 a0001c0002t0002 a0001c0006t0002 others(2): Show a0001c0001t0002 a0001c0002t0002 a0001c0006t0002 a0003c0030t0002 a0010c0039t0002	a0001c0001t0002g0136 a0001c0001t0002g0266 a0001c0002t0002g0282 others(4): Show a0001c0001t0002g0136 a0001c0001t0002g0266 a0001c0002t0002g0282 a0001c0006t0002g0287 a0001c0006t0002g0288 a0003c0030t0002g0008 a0010c0039t0002g0264	7	172	0.0407	45	c.153 others(64): Show c.1530-4895_1530-4894insACACCCGTCCCGAGACACCACTCACA CCCGTCCCGTGACACCACT	LMF1	ENSG00000103227.19	transcript	ENST00000262301.16	protein_coding	10/10			chr16	TogoVar
LMF1_chr16_848634_975984	903594	T T	TGGTGACC others(38): Show TGGTGACCTCTGCATCGCCCACAGGACGCCTGTCTCTGCTGCGTGG	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00733.hp2 HG01069.hp2 others(8): Show HG00099.hp2 HG00733.hp2 HG01069.hp2 HG01261.hp2 HG01515.hp1 HG01517.hp2 HG02738.hp1 HG03195.hp2 NA18975.hp2 NA19009.hp2 NA19043.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0001c0003 a0003c0009 others(1): Show a0001c0001 a0001c0003 a0003c0009 a0003c0032	a0001c0001t0002 a0001c0003t0001 a0003c0009t0001 others(1): Show a0001c0001t0002 a0001c0003t0001 a0003c0009t0001 a0003c0032t0001	a0001c0001t0002g0266 a0001c0003t0001g0124 a0001c0003t0001g0167 others(8): Show a0001c0001t0002g0266 a0001c0003t0001g0124 a0001c0003t0001g0167 a0001c0003t0001g0173 a0003c0009t0001g0001 a0003c0009t0001g0002 a0003c0009t0001g0003 a0003c0009t0001g0004 a0003c0009t0001g0005 a0003c0009t0001g0006 a0003c0032t0001g0007	11	181	0.0608	45	c.663 others(62): Show c.663+7292_663+7336dupCCACGCAGCAGAGACAGGCGTCCTGTGG GCGATGCAGAGGTCACC	LMF1	ENSG00000103227.19	transcript	ENST00000262301.16	protein_coding	4/10			chr16	TogoVar
LMOD3_chr3_69101065_69127595	69110853	A A	AAAAAAAA others(38): Show AAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG04184.hp2 HG04184.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0031 a0001c0002t0031	a0001c0002t0031g0341 a0001c0002t0031g0341	1	255	0.0039	45	c.165 others(64): Show c.1657-1733_1657-1732insATATATATATATATATATATTTTTTT TTTTTTTTTTTTTTTTTTT	LMOD3	ENSG00000163380.16	transcript	ENST00000420581.7	protein_coding	2/2			chr3	TogoVar
LOC114841035_chr11_64236095_64249132	64237126	G G	GAGAGAGA others(38): Show GAGAGAGAGAGAGAGAGAGAGAGACAGAGACAGACAGAGACAGACA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01978.hp1 HG01981.hp2 NA19065.hp1 others(1): Show HG01978.hp1 HG01981.hp2 NA19065.hp1 NA19085.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0001 a0001c0001t0002g0001	4	232	0.0172	45	c.-41 others(56): Show c.-4154_-4153insAGAGAGAGAGAGAGAGAGAGAGACAGAGACAGAC AGAGACAGACA	LOC114841035	ENSG00000286264.2	transcript	ENST00000652762.2	protein_coding		3968		chr11	TogoVar
LOC128462377_chr16_89312046_89423292	89390042	A A	AGAGAGAA others(38): Show AGAGAGAAGATCACTGGGGCGAACACCGAGTGTGGCGGAGAGCACC	intron_variant intron_variant	MODIFIER	HG01433.hp2 HG02129.hp2 HG03669.hp2 others(2): Show HG01433.hp2 HG02129.hp2 HG03669.hp2 HG03688.hp1 NA19091.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0073 a0001c0001t0001g0080 a0001c0001t0001g0107 others(2): Show a0001c0001t0001g0073 a0001c0001t0001g0080 a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0001g0250	5	366	0.0137	45	c.9+2 others(60): Show c.9+28241_9+28242insGGTGCTCTCCGCCACACTCGGTGTTCGCCC CAGTGATCTTCTCTC	LOC128462377	ENSG00000288715.2	transcript	ENST00000711617.1	protein_coding	1/1			chr16	TogoVar
LOC647264_chr13_63827361_63838053	63833748	T T	TATATATA others(38): Show TATATATATATATATATATATATATATATATATATATATATATGTA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19009.hp2 NA19064.hp2 NA19009.hp2 NA19064.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0000 a0001c0001t0002g0000	2	415	0.0048	45	c.-75 others(54): Show c.-756_-755insTACATATATATATATATATATATATATATATATATA TATATATAT	LOC647264	ENSG00000285566.2	transcript	ENST00000648713.2	protein_coding		696		chr13	TogoVar
LPP_chr3_188149157_188895671	188658122	A A	ATTAGTTT others(38): Show ATTAGTTTAGTTTAGTTTAGTTTAGTTTAGTTTAGTTTAGTTTAGT	intron_variant intron_variant	MODIFIER	HG03834.hp2 HG03834.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0048 a0001c0001t0048	a0001c0001t0048g0031 a0001c0001t0048g0031	1	2	0.5000	45	c.111 others(66): Show c.1113+48292_1113+48293insTTTAGTTTAGTTTAGTTTAGTTTA GTTTAGTTTAGTTTAGTTTAG	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	7/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LRBA_chr4_150259435_151020284	150658505	G G	GTCTCCTC others(38): Show GTCTCCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCC	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG02027.hp2 HG02129.hp2 others(2): Show HG00735.hp2 HG02027.hp2 HG02129.hp2 HG02486.hp2 NA18962.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0041 a0001c0001t0002g0017 a0001c0001t0002g0032 others(2): Show a0001c0001t0001g0041 a0001c0001t0002g0017 a0001c0001t0002g0032 a0001c0001t0002g0076 a0001c0001t0002g0085	5	77	0.0649	45	c.592 others(66): Show c.5921+25045_5921+25046insGGGAGAGGGAGAGGGAGAGGGAGA GGGAGAGGGAGAGGGAGGAGA	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	37/56			chr4	TogoVar
LRBA_chr4_150259435_151020284	150658509	C C	CCTGCCCC others(38): Show CCTGCCCCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTG	intron_variant intron_variant	MODIFIER	HG03579.hp2 HG03579.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0119 a0001c0001t0002g0119	1	144	0.0069	45	c.592 others(66): Show c.5921+25041_5921+25042insCAGAGGCAGAGGCAGAGGCAGAGG CAGAGGCAGAGGCAGGGGCAG	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	37/56			chr4	TogoVar
LRFN2_chr6_40386591_40592364	40583212	A A	ATATATAG others(38): Show ATATATAGTATATATACACATATATACATATATAGTATATATACAC	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02486.hp2 HG02055.hp1 HG02486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0005 a0001c0001t0001g0006	2	226	0.0088	45	c.-19 others(62): Show c.-19+3728_-19+3729insGTGTATATATACTATATATGTATATATG TGTATATATACTATATA	LRFN2	ENSG00000156564.10	transcript	ENST00000338305.7	protein_coding	1/2			chr6	TogoVar
LRIT3_chr4_109843107_109877315	109850402	C C	CTTTCTTT others(38): Show CTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG02809.hp2 HG02922.hp2 HG02809.hp2 HG02922.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0009 a0001c0004t0009	a0001c0004t0009g0006 a0001c0004t0009g0006	2	322	0.0062	45	c.117 others(62): Show c.117-1102_117-1101insTTTCTTTCTCTTTCTTTCTTTCTTTCTT TCTTTCTTTCTTTCTTT	LRIT3	ENSG00000183423.12	transcript	ENST00000594814.6	protein_coding	1/3			chr4	TogoVar
LRIT3_chr4_109843107_109877315	109850422	C C	CCTTCTTT others(38): Show CCTTCTTTCTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	NA19084.hp1 NA19084.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0002 a0003c0003t0002	a0003c0003t0002g0002 a0003c0003t0002g0002	1	17	0.0588	45	c.117 others(62): Show c.117-1079_117-1078insCTTTCTTCTTCTTTCTTTCTTTCTTTCT TTCTTTCTTTCTTTCTT	LRIT3	ENSG00000183423.12	transcript	ENST00000594814.6	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr4	TogoVar
LRMDA_chr10_75426624_76565168	76336127	G G	GGACATGC others(38): Show GGACATGCTCATTTACTCATTTAAATCACCATTTACTGAAGGACAT	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG02818.hp1 HG02922.hp2 others(8): Show HG00639.hp1 HG02818.hp1 HG02922.hp2 HG02976.hp2 HG03139.hp1 HG03195.hp2 HG03209.hp2 HG03486.hp2 NA19240.hp2 NA20300.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 others(8): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0002t0001 a0001c0002t0005 a0001c0002t0007 a0001c0002t0014 a0001c0002t0015	a0001c0001t0001g0031 a0001c0001t0004g0014 a0001c0001t0005g0033 others(8): Show a0001c0001t0001g0031 a0001c0001t0004g0014 a0001c0001t0005g0033 a0001c0001t0006g0009 a0001c0001t0007g0046 a0001c0001t0008g0010 a0001c0002t0001g0044 a0001c0002t0005g0032 a0001c0002t0007g0007 a0001c0002t0014g0041 a0001c0002t0015g0040	11	46	0.2391	45	c.601 others(64): Show c.601+11643_601+11644insACATGCTCATTTACTCATTTAAATCA CCATTTACTGAAGGACATG	LRMDA	ENSG00000148655.16	transcript	ENST00000611255.5	protein_coding	6/6		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRP11_chr6_149813757_149869359	149859397	T T	TATATATA others(38): Show TATATATATATATATATATATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG03017.hp2 HG03017.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0206 a0001c0001t0001g0206	1	291	0.0034	45	c.613 others(62): Show c.613+4010_613+4011insTATATATATATATATATATATATATATA TATATATATATATATAT	LRP11	ENSG00000120256.11	transcript	ENST00000239367.7	protein_coding	1/6			chr6	TogoVar
LRP1B_chr2_140226423_142136016	141331545	T T	TTTCTTTC others(38): Show TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTC	intron_variant intron_variant	MODIFIER	HG03225.hp2 HG03225.hp2	a0001 a0001	a0001c0018 a0001c0018	a0001c0018t0002 a0001c0018t0002	a0001c0018t0002g0013 a0001c0018t0002g0013	1	28	0.0357	45	c.344 others(64): Show c.344-76905_344-76904insGAAGAAGAAAGAAAGAAAGAAAGAAA GAAAGAAAGAAAGAAAGAA	LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding	3/90			chr2	TogoVar
LRP5_chr11_68307591_68454275	68389156	A A	ATTTACCG others(38): Show ATTTACCGACACCGACATTTACCGACACCGTTTACCAACACCGACG	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00423.hp1 HG00423.hp2 others(118): Show HG00140.hp1 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00558.hp1 HG00558.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00735.hp2 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01167.hp2 HG01169.hp2 HG01192.hp2 HG01358.hp2 HG01433.hp1 HG01515.hp2 HG01516.hp2 HG01884.hp1 HG01934.hp1 HG01934.hp2 HG01978.hp2 HG01981.hp1 HG01993.hp1 HG01993.hp2 HG02015.hp1 HG02015.hp2 HG02055.hp1 HG02055.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02258.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp2 HG02630.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02818.hp2 HG02895.hp2 HG02896.hp2 HG02922.hp1 HG02965.hp2 HG03098.hp1 HG03130.hp2 HG03139.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03492.hp1 HG03492.hp2 HG03516.hp2 HG03540.hp1 HG03579.hp1 HG06807.hp1 NA18522.hp1 NA18906.hp2 NA18941.hp2 NA18945.hp1 NA18946.hp1 NA18952.hp1 NA18955.hp1 NA18955.hp2 NA18959.hp1 NA18959.hp2 NA18960.hp1 NA18960.hp2 NA18966.hp1 NA18966.hp2 NA18971.hp1 NA18971.hp2 NA18973.hp1 NA18973.hp2 NA18975.hp1 NA18975.hp2 NA18983.hp1 NA18983.hp2 NA18988.hp1 NA18988.hp2 NA18991.hp1 NA18991.hp2 NA18995.hp1 NA18998.hp1 NA18998.hp2 NA19030.hp2 NA19057.hp1 NA19067.hp1 NA19067.hp2 NA19079.hp1 NA19079.hp2 NA19084.hp1 NA19085.hp1 NA19085.hp2 NA19088.hp1 NA19088.hp2 NA19091.hp1 NA20129.hp1 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA21309.hp1	a0001 a0002 a0003 others(7): Show a0001 a0002 a0003 a0004 a0005 a0009 a0010 a0012 a0013 a0015	a0001c0001 a0001c0002 a0001c0004 others(27): Show a0001c0001 a0001c0002 a0001c0004 a0001c0005 a0001c0007 a0001c0009 a0001c0020 a0001c0026 a0001c0027 a0001c0030 a0001c0034 a0001c0036 a0001c0042 a0001c0043 a0002c0003 a0002c0028 a0002c0033 a0002c0037 a0003c0006 a0003c0011 a0003c0014 a0003c0022 a0003c0023 a0004c0008 a0005c0010 a0009c0021 a0010c0047 a0012c0031 a0013c0045 a0015c0032	a0001c0001t0001 a0001c0002t0001 a0001c0004t0001 others(27): Show a0001c0001t0001 a0001c0002t0001 a0001c0004t0001 a0001c0005t0001 a0001c0007t0001 a0001c0009t0001 a0001c0020t0001 a0001c0026t0001 a0001c0027t0001 a0001c0030t0001 a0001c0034t0001 a0001c0036t0001 a0001c0042t0001 a0001c0043t0001 a0002c0003t0001 a0002c0028t0001 a0002c0033t0001 a0002c0037t0001 a0003c0006t0001 a0003c0011t0001 a0003c0014t0001 a0003c0022t0001 a0003c0023t0001 a0004c0008t0001 a0005c0010t0001 a0009c0021t0001 a0010c0047t0001 a0012c0031t0001 a0013c0045t0001 a0015c0032t0001	a0001c0001t0001g0042 a0001c0001t0001g0044 a0001c0001t0001g0047 others(118): Show a0001c0001t0001g0042 a0001c0001t0001g0044 a0001c0001t0001g0047 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0061 a0001c0001t0001g0066 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0082 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0099 a0001c0001t0001g0103 a0001c0001t0001g0121 a0001c0001t0001g0125 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0130 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0137 a0001c0001t0001g0138 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0143 a0001c0001t0001g0146 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0001g0164 a0001c0001t0001g0166 a0001c0001t0001g0168 a0001c0001t0001g0171 a0001c0001t0001g0172 a0001c0001t0001g0173 a0001c0001t0001g0200 a0001c0002t0001g0009 a0001c0002t0001g0014 a0001c0002t0001g0155 a0001c0002t0001g0156 a0001c0002t0001g0157 a0001c0002t0001g0158 a0001c0002t0001g0159 a0001c0002t0001g0160 a0001c0002t0001g0161 a0001c0002t0001g0162 a0001c0004t0001g0003 a0001c0004t0001g0068 a0001c0004t0001g0083 a0001c0004t0001g0089 a0001c0004t0001g0097 a0001c0004t0001g0098 a0001c0004t0001g0111 a0001c0004t0001g0122 a0001c0004t0001g0152 a0001c0004t0001g0179 a0001c0005t0001g0002 a0001c0005t0001g0015 a0001c0005t0001g0202 a0001c0005t0001g0208 a0001c0007t0001g0016 a0001c0007t0001g0017 a0001c0007t0001g0100 a0001c0007t0001g0101 a0001c0009t0001g0006 a0001c0009t0001g0081 a0001c0009t0001g0145 a0001c0020t0001g0201 a0001c0026t0001g0049 a0001c0027t0001g0094 a0001c0030t0001g0011 a0001c0034t0001g0077 a0001c0036t0001g0165 a0001c0042t0001g0177 a0001c0043t0001g0178 a0002c0003t0001g0012 a0002c0003t0001g0013 a0002c0003t0001g0034 a0002c0003t0001g0045 a0002c0003t0001g0053 a0002c0003t0001g0056 a0002c0003t0001g0059 a0002c0003t0001g0060 a0002c0003t0001g0063 a0002c0003t0001g0067 a0002c0003t0001g0072 a0002c0003t0001g0076 a0002c0003t0001g0115 a0002c0003t0001g0126 a0002c0003t0001g0129 a0002c0003t0001g0131 a0002c0003t0001g0169 a0002c0028t0001g0048 a0002c0033t0001g0069 a0002c0037t0001g0167 a0003c0006t0001g0025 a0003c0011t0001g0018 a0003c0011t0001g0020 a0003c0011t0001g0150 a0003c0014t0001g0026 a0003c0022t0001g0021 a0003c0023t0001g0027 a0004c0008t0001g0065 a0004c0008t0001g0140 a0004c0008t0001g0195 a0004c0008t0001g0196 a0004c0008t0001g0197 a0004c0008t0001g0199 a0005c0010t0001g0144 a0009c0021t0001g0170 a0010c0047t0001g0198 a0012c0031t0001g0052 a0013c0045t0001g0073 a0015c0032t0001g0185	121	207	0.5845	45	c.141 others(62): Show c.1413-698_1413-697insCGTTTACCAACACCGACGTTTACCGACA CCGACATTTACCGACAC	LRP5	ENSG00000162337.12	transcript	ENST00000294304.12	protein_coding	6/22		INFO_REALIGN_3_PRIME	chr11	TogoVar
LRP5_chr11_68307591_68454275	68389156	A A	ATTTACCG others(38): Show ATTTACCGACACCGACATTTACCGACACCGTTTACCAACACCGATG	intron_variant intron_variant	MODIFIER	HG01070.hp1 HG01071.hp1 HG01070.hp1 HG01071.hp1	a0003 a0003	a0003c0012 a0003c0012	a0003c0012t0001 a0003c0012t0001	a0003c0012t0001g0001 a0003c0012t0001g0001	2	88	0.0227	45	c.141 others(62): Show c.1413-698_1413-697insCGTTTACCAACACCGATGTTTACCGACA CCGACATTTACCGACAC	LRP5	ENSG00000162337.12	transcript	ENST00000294304.12	protein_coding	6/22		INFO_REALIGN_3_PRIME	chr11	TogoVar
LRP5_chr11_68307591_68454275	68389168	C C	CGACATTT others(38): Show CGACATTTACCGACACCATTTACCAACACCGACGTTTACCGACACT	intron_variant intron_variant	MODIFIER	HG01257.hp2 HG01257.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0037 a0002c0003t0001g0037	1	130	0.0077	45	c.141 others(62): Show c.1413-698_1413-697insCATTTACCAACACCGACGTTTACCGACA CTGACATTTACCGACAC	LRP5	ENSG00000162337.12	transcript	ENST00000294304.12	protein_coding	6/22		INFO_REALIGN_3_PRIME	chr11	TogoVar
LRP5_chr11_68307591_68454275	68389168	C C	CGACATTT others(38): Show CGACATTTACCGACACCGTTTACCAACACCGACGTTTACCGACACT	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00735.hp1 HG01070.hp2 others(76): Show HG00140.hp2 HG00735.hp1 HG01070.hp2 HG01081.hp1 HG01081.hp2 HG01109.hp1 HG01109.hp2 HG01167.hp1 HG01169.hp1 HG01192.hp1 HG01243.hp1 HG01243.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01258.hp1 HG01258.hp2 HG01358.hp1 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01516.hp1 HG01884.hp2 HG01978.hp1 HG01981.hp2 HG02109.hp2 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02165.hp2 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp2 HG02622.hp1 HG02723.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02897.hp1 HG02897.hp2 HG02922.hp2 HG02965.hp1 HG02970.hp2 HG03098.hp2 HG03130.hp1 HG03139.hp2 HG03195.hp1 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03516.hp1 HG03579.hp2 HG06807.hp2 NA18522.hp2 NA18906.hp1 NA18941.hp1 NA18942.hp2 NA18945.hp2 NA18946.hp2 NA18952.hp2 NA18995.hp2 NA19030.hp1 NA19043.hp1 NA19043.hp2 NA19057.hp2 NA19084.hp2 NA19091.hp2 NA20129.hp2 NA20752.hp2 NA21309.hp2	a0001 a0002 a0003 others(7): Show a0001 a0002 a0003 a0005 a0006 a0007 a0008 a0011 a0014 a0016	a0001c0001 a0001c0002 a0001c0004 others(22): Show a0001c0001 a0001c0002 a0001c0004 a0001c0005 a0001c0007 a0001c0009 a0001c0013 a0001c0019 a0001c0025 a0001c0029 a0001c0038 a0001c0046 a0002c0003 a0003c0006 a0003c0014 a0003c0015 a0003c0016 a0003c0024 a0005c0010 a0006c0018 a0007c0017 a0008c0039 a0011c0035 a0014c0048 a0016c0044	a0001c0001t0001 a0001c0002t0001 a0001c0004t0001 others(22): Show a0001c0001t0001 a0001c0002t0001 a0001c0004t0001 a0001c0005t0001 a0001c0007t0001 a0001c0009t0001 a0001c0013t0001 a0001c0019t0001 a0001c0025t0001 a0001c0029t0001 a0001c0038t0001 a0001c0046t0001 a0002c0003t0001 a0003c0006t0001 a0003c0014t0001 a0003c0015t0001 a0003c0016t0001 a0003c0024t0001 a0005c0010t0001 a0006c0018t0001 a0007c0017t0001 a0008c0039t0001 a0011c0035t0001 a0014c0048t0001 a0016c0044t0001	a0001c0001t0001g0038 a0001c0001t0001g0064 a0001c0001t0001g0087 others(76): Show a0001c0001t0001g0038 a0001c0001t0001g0064 a0001c0001t0001g0087 a0001c0001t0001g0109 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0174 a0001c0001t0001g0204 a0001c0001t0001g0205 a0001c0001t0001g0206 a0001c0001t0001g0207 a0001c0001t0001g0210 a0001c0002t0001g0010 a0001c0002t0001g0119 a0001c0002t0001g0124 a0001c0002t0001g0175 a0001c0002t0001g0180 a0001c0002t0001g0181 a0001c0002t0001g0183 a0001c0002t0001g0184 a0001c0002t0001g0186 a0001c0002t0001g0187 a0001c0002t0001g0188 a0001c0002t0001g0190 a0001c0002t0001g0191 a0001c0002t0001g0203 a0001c0004t0001g0085 a0001c0004t0001g0088 a0001c0004t0001g0107 a0001c0004t0001g0114 a0001c0004t0001g0118 a0001c0004t0001g0120 a0001c0004t0001g0123 a0001c0004t0001g0209 a0001c0005t0001g0108 a0001c0005t0001g0117 a0001c0005t0001g0211 a0001c0007t0001g0008 a0001c0007t0001g0151 a0001c0009t0001g0041 a0001c0009t0001g0104 a0001c0013t0001g0054 a0001c0013t0001g0055 a0001c0013t0001g0193 a0001c0019t0001g0112 a0001c0019t0001g0113 a0001c0025t0001g0036 a0001c0029t0001g0116 a0001c0038t0001g0091 a0001c0046t0001g0136 a0002c0003t0001g0040 a0002c0003t0001g0043 a0002c0003t0001g0062 a0002c0003t0001g0110 a0003c0006t0001g0024 a0003c0006t0001g0030 a0003c0006t0001g0031 a0003c0006t0001g0032 a0003c0006t0001g0033 a0003c0014t0001g0007 a0003c0015t0001g0022 a0003c0015t0001g0023 a0003c0016t0001g0004 a0003c0016t0001g0028 a0003c0024t0001g0019 a0005c0010t0001g0035 a0005c0010t0001g0039 a0005c0010t0001g0046 a0005c0010t0001g0147 a0006c0018t0001g0050 a0006c0018t0001g0051 a0007c0017t0001g0105 a0007c0017t0001g0106 a0008c0039t0001g0189 a0011c0035t0001g0102 a0014c0048t0001g0182 a0016c0044t0001g0139	79	208	0.3798	45	c.141 others(62): Show c.1413-698_1413-697insCGTTTACCAACACCGACGTTTACCGACA CTGACATTTACCGACAC	LRP5	ENSG00000162337.12	transcript	ENST00000294304.12	protein_coding	6/22		INFO_REALIGN_3_PRIME	chr11	TogoVar
LRP5_chr11_68307591_68454275	68433521	T T	TGCTTTGA others(38): Show TGCTTTGAAGCCCAGTCACGCCATTGCCTGGGTTTTGCTGGGCGGG	intron_variant intron_variant	MODIFIER	NA18959.hp1 NA18959.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0067 a0002c0003t0001g0067	1	210	0.0048	45	c.376 others(60): Show c.3764-77_3764-33dupTTGAAGCCCAGTCACGCCATTGCCTGGGTT TTGCTGGGCGGGGCT	LRP5	ENSG00000162337.12	transcript	ENST00000294304.12	protein_coding	17/22		INFO_REALIGN_3_PRIME	chr11	TogoVar
LRRC24_chr8_144517388_144532033	144531241	A A	AGCGAGCA others(38): Show AGCGAGCAGCAGGTGGGGAGTGGGCTAGACATAGCAGGCACGGCAG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01981.hp2 NA18960.hp2 NA18967.hp1 others(2): Show HG01981.hp2 NA18960.hp2 NA18967.hp1 NA18985.hp2 NA18998.hp1	a0002 a0009 a0002 a0009	a0002c0002 a0009c0016 a0002c0002 a0009c0016	a0002c0002t0001 a0009c0016t0001 a0002c0002t0001 a0009c0016t0001	a0002c0002t0001g0001 a0009c0016t0001g0040 a0002c0002t0001g0001 a0009c0016t0001g0040	5	384	0.0130	45	c.-43 others(56): Show c.-4342_-4341insCTGCCGTGCCTGCTATGTCTAGCCCACTCCCCAC CTGCTGCTCGC	LRRC24	ENSG00000254402.7	transcript	ENST00000529415.7	protein_coding		4209		chr8	TogoVar
LRRC24_chr8_144517388_144532033	144531831	A A	AGCGAGCA others(38): Show AGCGAGCAGCAGGTGGGGAGTGGGCTAGACATAGCAGGCACGGCAG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01346.hp1 HG01346.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0002	1	396	0.0025	45	c.-49 others(56): Show c.-4932_-4931insCTGCCGTGCCTGCTATGTCTAGCCCACTCCCCAC CTGCTGCTCGC	LRRC24	ENSG00000254402.7	transcript	ENST00000529415.7	protein_coding		4799		chr8	TogoVar
LRRC40_chr1_70139805_70210579	70187838	G G	GGAAGAGA others(38): Show GGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGA	intron_variant intron_variant	MODIFIER	HG02922.hp2 HG03669.hp1 HG04184.hp1 others(4): Show HG02922.hp2 HG03669.hp1 HG04184.hp1 NA18957.hp1 NA19004.hp2 NA19005.hp1 NA19065.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0001 a0001c0001t0002g0211 a0001c0001t0002g0214 others(1): Show a0001c0001t0002g0001 a0001c0001t0002g0211 a0001c0001t0002g0214 a0001c0001t0002g0221	7	46	0.1522	45	c.334 others(60): Show c.334-545_334-501dupTCTTCTCTTCTCTTCTCTTCTCTTCTCTTC TCTTCTCTTCTCTTC	LRRC40	ENSG00000066557.6	transcript	ENST00000370952.4	protein_coding	2/14			chr1	TogoVar
LRRC71_chr1_156915632_156938094	156928363	C C	CTCTTCTT others(38): Show CTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT	intron_variant intron_variant	MODIFIER	HG01175.hp2 HG02486.hp2 HG01175.hp2 HG02486.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0003 a0002c0002t0001g0014 a0002c0002t0001g0003 a0002c0002t0001g0014	2	56	0.0357	45	c.996 others(60): Show c.996+403_996+404insTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC TTCTTCTTCTTCTTC	LRRC71	ENSG00000160838.14	transcript	ENST00000337428.8	protein_coding	9/14		INFO_REALIGN_3_PRIME	chr1	TogoVar
LRRC71_chr1_156915632_156938094	156928404	C C	CTTCTTCT others(38): Show CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTA	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG03209.hp1 HG03471.hp1 HG02055.hp2 HG03209.hp1 HG03471.hp1	a0003 a0004 a0003 a0004	a0003c0004 a0004c0005 a0003c0004 a0004c0005	a0003c0004t0001 a0003c0004t0002 a0004c0005t0001 a0003c0004t0001 a0003c0004t0002 a0004c0005t0001	a0003c0004t0001g0092 a0003c0004t0002g0084 a0004c0005t0001g0098 a0003c0004t0001g0092 a0003c0004t0002g0084 a0004c0005t0001g0098	3	375	0.0080	45	c.996 others(60): Show c.996+403_996+404insTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC TTCTTCCTCTTATTC	LRRC71	ENSG00000160838.14	transcript	ENST00000337428.8	protein_coding	9/14		INFO_REALIGN_3_PRIME	chr1	TogoVar
LRRC74A_chr14_76821408_76875304	76867031	T T	TGTGTGTG others(38): Show TGTGTGTGGTAGTGTGTGTGGGGGAGTGTGTGTGTTGGGGGGTGGG	intron_variant intron_variant	MODIFIER	HG02132.hp2 NA18940.hp1 NA18959.hp2 others(4): Show HG02132.hp2 NA18940.hp1 NA18959.hp2 NA18972.hp1 NA18981.hp2 NA19007.hp1 NA19057.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0001c0007 a0003c0003 a0001c0001 a0001c0007 a0003c0003	a0001c0001t0002 a0001c0007t0001 a0003c0003t0002 a0001c0001t0002 a0001c0007t0001 a0003c0003t0002	a0001c0001t0002g0212 a0001c0001t0002g0213 a0001c0001t0002g0219 others(4): Show a0001c0001t0002g0212 a0001c0001t0002g0213 a0001c0001t0002g0219 a0001c0001t0002g0221 a0001c0007t0001g0194 a0003c0003t0002g0337 a0003c0003t0002g0353	7	323	0.0217	45	c.130 others(62): Show c.1309-318_1309-317insGTAGTGTGTGTGGGGGAGTGTGTGTGTT GGGGGGTGGGGTGTGTG	LRRC74A	ENSG00000100565.16	transcript	ENST00000689127.1	protein_coding	12/13		INFO_REALIGN_3_PRIME	chr14	TogoVar
LRRC7_chr1_69562922_70149364	69898662	A A	ACTGCTGC others(38): Show ACTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTG	intron_variant intron_variant	MODIFIER	HG03130.hp2 HG03130.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0018 a0001c0001t0018	a0001c0001t0018g0023 a0001c0001t0018g0023	1	51	0.0196	45	c.648 others(64): Show c.648-32816_648-32815insGCTGCTGCTGCTGCTGCTGCTGCTGC TGCTGCTGCTGCTGCTGCT	LRRC7	ENSG00000033122.21	transcript	ENST00000651989.2	protein_coding	7/26		INFO_REALIGN_3_PRIME	chr1	TogoVar
LRRC8C_chr1_89628120_89724533	89638967	A A	ATTATTTT others(38): Show ATTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATT	intron_variant intron_variant	MODIFIER	NA18961.hp1 NA18992.hp1 NA18961.hp1 NA18992.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0003 a0002c0002t0003	a0002c0002t0003g0238 a0002c0002t0003g0239 a0002c0002t0003g0238 a0002c0002t0003g0239	2	15	0.1333	45	c.-5+ others(60): Show c.-5+5676_-5+5677insTATTTTATTTTATTTTATTTTATTTTATTT TATTTTATTTTATTT	LRRC8C	ENSG00000171488.15	transcript	ENST00000370454.9	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr1	TogoVar
LRRIQ1_chr12_85031351_85250105	85135716	A A	AGTATTAT others(38): Show AGTATTATTATTGCTGCTTAAATGGTGGTCTTTTATTTGGCCAGTG	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00280.hp2 HG00323.hp2 others(75): Show HG00140.hp2 HG00280.hp2 HG00323.hp2 HG00609.hp2 HG00639.hp2 HG00642.hp1 HG00735.hp1 HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01074.hp1 HG01074.hp2 HG01099.hp2 HG01123.hp1 HG01169.hp1 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01256.hp1 HG01257.hp2 HG01258.hp2 HG01261.hp2 HG01358.hp2 HG01496.hp1 HG01981.hp1 HG02040.hp1 HG02080.hp1 HG02109.hp1 HG02135.hp1 HG02257.hp1 HG02258.hp2 HG02280.hp2 HG02486.hp1 HG02572.hp2 HG02602.hp2 HG02647.hp1 HG02647.hp2 HG02683.hp2 HG02698.hp2 HG02717.hp2 HG02809.hp2 HG02895.hp2 HG02970.hp2 HG03017.hp2 HG03098.hp2 HG03139.hp1 HG03209.hp2 HG03486.hp1 HG03516.hp1 HG03540.hp2 HG03710.hp1 HG03831.hp2 HG06807.hp1 NA18906.hp1 NA18945.hp1 NA18954.hp1 NA18963.hp1 NA18968.hp1 NA18973.hp1 NA18981.hp1 NA18982.hp2 NA18983.hp1 NA18984.hp1 NA18991.hp1 NA18993.hp1 NA18999.hp1 NA19009.hp1 NA19011.hp2 NA19012.hp1 NA19030.hp1 NA19074.hp1 NA19077.hp1 NA19086.hp1 NA19240.hp2 NA20300.hp1 NA20300.hp2 NA20805.hp1 NA21309.hp2	a0001 a0002 a0003 others(5): Show a0001 a0002 a0003 a0005 a0006 a0008 a0009 a0012	a0001c0001 a0001c0005 a0001c0020 others(7): Show a0001c0001 a0001c0005 a0001c0020 a0002c0003 a0003c0004 a0005c0006 a0006c0007 a0008c0012 a0009c0014 a0012c0015	a0001c0001t0001 a0001c0005t0001 a0001c0020t0001 others(7): Show a0001c0001t0001 a0001c0005t0001 a0001c0020t0001 a0002c0003t0001 a0003c0004t0001 a0005c0006t0001 a0006c0007t0001 a0008c0012t0001 a0009c0014t0001 a0012c0015t0001	a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0010 others(74): Show a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0014 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0110 a0001c0001t0001g0112 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0117 a0001c0001t0001g0118 a0001c0005t0001g0155 a0001c0020t0001g0111 a0002c0003t0001g0161 a0002c0003t0001g0162 a0002c0003t0001g0163 a0002c0003t0001g0164 a0002c0003t0001g0165 a0002c0003t0001g0166 a0002c0003t0001g0167 a0002c0003t0001g0168 a0002c0003t0001g0170 a0002c0003t0001g0171 a0002c0003t0001g0172 a0002c0003t0001g0173 a0002c0003t0001g0174 a0002c0003t0001g0175 a0002c0003t0001g0178 a0002c0003t0001g0179 a0002c0003t0001g0180 a0002c0003t0001g0181 a0002c0003t0001g0182 a0002c0003t0001g0183 a0002c0003t0001g0184 a0002c0003t0001g0185 a0002c0003t0001g0186 a0002c0003t0001g0187 a0002c0003t0001g0188 a0002c0003t0001g0189 a0002c0003t0001g0191 a0002c0003t0001g0192 a0002c0003t0001g0193 a0002c0003t0001g0194 a0002c0003t0001g0195 a0002c0003t0001g0196 a0003c0004t0001g0169 a0003c0004t0001g0197 a0003c0004t0001g0201 a0003c0004t0001g0203 a0003c0004t0001g0204 a0003c0004t0001g0205 a0003c0004t0001g0206 a0003c0004t0001g0207 a0003c0004t0001g0208 a0003c0004t0001g0210 a0003c0004t0001g0211 a0003c0004t0001g0212 a0003c0004t0001g0213 a0003c0004t0001g0214 a0005c0006t0001g0003 a0005c0006t0001g0176 a0005c0006t0001g0177 a0005c0006t0001g0190 a0006c0007t0001g0198 a0006c0007t0001g0199 a0006c0007t0001g0200 a0006c0007t0001g0202 a0008c0012t0001g0008 a0008c0012t0001g0009 a0009c0014t0001g0209 a0012c0015t0001g0071	78	226	0.3451	45	c.421 others(64): Show c.4210-2131_4210-2130insTTATTATTGCTGCTTAAATGGTGGTC TTTTATTTGGCCAGTGGTA	LRRIQ1	ENSG00000133640.20	transcript	ENST00000393217.7	protein_coding	18/26		INFO_REALIGN_3_PRIME	chr12	TogoVar
LRRK1_chr15_100914357_101083257	100962823	A A	ATACATAT others(38): Show ATACATATATATATATATACATATATATATATATATATTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01106.hp2 HG01106.hp2	a0011 a0011	a0011c0096 a0011c0096	a0011c0096t0087 a0011c0096t0087	a0011c0096t0087g0193 a0011c0096t0087g0193	1	81	0.0123	45	c.98- others(62): Show c.98-10980_98-10979insACATATATATATATATACATATATATAT ATATATATTTTTTTTTT	LRRK1	ENSG00000154237.13	transcript	ENST00000388948.8	protein_coding	2/33		INFO_REALIGN_3_PRIME	chr15	TogoVar
LRRK1_chr15_100914357_101083257	100962823	A A	ATACATAT others(38): Show ATACATATATATATATATACATATATATATATATATTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA19005.hp1 NA19074.hp2 NA19005.hp1 NA19074.hp2	a0001 a0001	a0001c0023 a0001c0109 a0001c0023 a0001c0109	a0001c0023t0018 a0001c0109t0018 a0001c0023t0018 a0001c0109t0018	a0001c0023t0018g0208 a0001c0109t0018g0217 a0001c0023t0018g0208 a0001c0109t0018g0217	2	82	0.0244	45	c.98- others(62): Show c.98-10980_98-10979insACATATATATATATATACATATATATAT ATATATTTTTTTTTTTT	LRRK1	ENSG00000154237.13	transcript	ENST00000388948.8	protein_coding	2/33		INFO_REALIGN_3_PRIME	chr15	TogoVar
LRRTM3_chr10_66921036_67106551	66978552	A A	AAAAAAAA others(38): Show AAAAAAAAAATAAAAAAAAAAAAAATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02055.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0136 a0001c0001t0001g0136	1	47	0.0213	45	c.153 others(66): Show c.1536+50101_1536+50102insAAAAAAAATAAAAAAAAAAAAAAT ATATATATATATATATATATA	LRRTM3	ENSG00000198739.11	transcript	ENST00000361320.5	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRRTM3_chr10_66921036_67106551	66978552	A A	ATAAAAAA others(38): Show ATAAAAAAAATAAAAAAAAAATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03225.hp2 HG03225.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0007 a0001c0003t0007	a0001c0003t0007g0290 a0001c0003t0007g0290	1	47	0.0213	45	c.153 others(66): Show c.1536+50100_1536+50101insTAAAAAAAATAAAAAAAAAATATA TATATATATATATATATATAT	LRRTM3	ENSG00000198739.11	transcript	ENST00000361320.5	protein_coding	2/2			chr10	TogoVar
LRRTM4_chr2_76742685_77527376	76812791	T T	TCCCCCTC others(38): Show TCCCCCTCCTCCTCTCCCTCCCCCCTTCCTCCTCCTCTCCCTCCCC	intron_variant intron_variant	MODIFIER	HG02135.hp2 HG02135.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0075 a0001c0001t0002g0075	1	69	0.0145	45	c.155 others(66): Show c.1552-63876_1552-63875insGGGGAGGGAGAGGAGGAGGAAGGG GGGAGGGAGAGGAGGAGGGGG	LRRTM4	ENSG00000176204.14	transcript	ENST00000409884.6	protein_coding	3/3			chr2	TogoVar
LSS_chr21_46183446_46233774	46228815	C C	CCCCGCCC others(38): Show CCCCGCCCCTCCCGCCCCTCCCGCCCCTCCCGCCCCTCCCGCCCCT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00544.hp1 HG01243.hp2 HG01516.hp1 others(5): Show HG00544.hp1 HG01243.hp2 HG01516.hp1 HG02148.hp1 HG02486.hp2 HG02723.hp2 HG03688.hp2 HG06807.hp2	a0001 a0010 a0001 a0010	a0001c0001 a0001c0005 a0010c0020 a0001c0001 a0001c0005 a0010c0020	a0001c0001t0001 a0001c0001t0017 a0001c0005t0001 others(1): Show a0001c0001t0001 a0001c0001t0017 a0001c0005t0001 a0010c0020t0001	a0001c0001t0001g0032 a0001c0001t0001g0164 a0001c0001t0001g0185 others(5): Show a0001c0001t0001g0032 a0001c0001t0001g0164 a0001c0001t0001g0185 a0001c0001t0017g0189 a0001c0005t0001g0043 a0001c0005t0001g0264 a0001c0005t0001g0276 a0010c0020t0001g0170	8	116	0.0690	45	c.-71 others(52): Show c.-71_-70insAGGGGCGGGAGGGGCGGGAGGGGCGGGAGGGGCGGGAG GGGCGGG	LSS	ENSG00000160285.15	transcript	ENST00000397728.8	protein_coding		42		chr21	TogoVar
LURAP1L_chr9_12770020_12828060	12786547	C C	CTATATAT others(38): Show CTATATATATATATATATATATATATATATATGTATATATATATAT	intron_variant intron_variant	MODIFIER	HG03041.hp1 HG03041.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0028 a0001c0001t0001g0028	1	82	0.0122	45	c.312 others(64): Show c.312+10520_312+10521insTATATATATATATATATATATATATA TATATGTATATATATATAT	LURAP1L	ENSG00000153714.6	transcript	ENST00000319264.4	protein_coding	1/1			chr9	TogoVar
LUZP1_chr1_23079030_23173856	23139019	A A	AAAAAAAT others(38): Show AAAAAAATATATATATATATATATATATATATATATATACACATAT	intron_variant intron_variant	MODIFIER	HG02683.hp1 HG02683.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0011 a0002c0002t0011	a0002c0002t0011g0031 a0002c0002t0011g0031	1	149	0.0067	45	c.-22 others(66): Show c.-226+29746_-226+29747insATATGTGTATATATATATATATAT ATATATATATATATATTTTTT	LUZP1	ENSG00000169641.15	transcript	ENST00000302291.9	protein_coding	1/3			chr1	TogoVar
LUZP1_chr1_23079030_23173856	23139019	A A	AAATATAT others(38): Show AAATATATATATATATATATATATATATATATATATACACATATAT	intron_variant intron_variant	MODIFIER	HG03490.hp2 HG03492.hp2 HG03490.hp2 HG03492.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0011 a0002c0002t0011	a0002c0002t0011g0032 a0002c0002t0011g0033 a0002c0002t0011g0032 a0002c0002t0011g0033	2	150	0.0133	45	c.-22 others(66): Show c.-226+29746_-226+29747insATATATGTGTATATATATATATAT ATATATATATATATATATATT	LUZP1	ENSG00000169641.15	transcript	ENST00000302291.9	protein_coding	1/3			chr1	TogoVar
LY6E_chr8_143013529_143027409	143014946	T T	TGAGGAGG others(38): Show TGAGGAGGAGGGAGTCCCGTGTGAGGAGGAGGGAGTGCTGTGTGAG	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18963.hp2 NA19062.hp2 NA18963.hp2 NA19062.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0001 a0001c0001t0002g0001	2	376	0.0053	45	c.-36 others(56): Show c.-3698_-3697insGAGGAGGAGGGAGTCCCGTGTGAGGAGGAGGGAG TGCTGTGTGAG	LY6E	ENSG00000160932.11	transcript	ENST00000292494.11	protein_coding		3582		chr8	TogoVar
LY6E_chr8_143013529_143027409	143015006	G G	GTGTGAGG others(38): Show GTGTGAGGAGGAGGAGGGAGTCCTGTGTGAGGAGGAAGGAGTCCCA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01891.hp1 HG02630.hp2 HG02922.hp1 others(1): Show HG01891.hp1 HG02630.hp2 HG02922.hp1 HG03516.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0004 a0001c0001t0003g0022 a0001c0001t0003g0004 a0001c0001t0003g0022	4	375	0.0107	45	c.-36 others(56): Show c.-3638_-3637insTGTGAGGAGGAGGAGGGAGTCCTGTGTGAGGAGG AAGGAGTCCCA	LY6E	ENSG00000160932.11	transcript	ENST00000292494.11	protein_coding		3522		chr8	TogoVar
LY6E_chr8_143013529_143027409	143015145	G G	GAGAGGGG others(38): Show GAGAGGGGAGTCCCGTGTGAGGAGGAGGGAGTGCTGTGTGAGGAGC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01071.hp2 HG01071.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0003	1	376	0.0027	45	c.-34 others(56): Show c.-3499_-3498insAGAGGGGAGTCCCGTGTGAGGAGGAGGGAGTGCT GTGTGAGGAGC	LY6E	ENSG00000160932.11	transcript	ENST00000292494.11	protein_coding		3383		chr8	TogoVar
LY6E_chr8_143013529_143027409	143015158	C C	CGTGTGAG others(38): Show CGTGTGAGGAGGAGGGAGTGCTGTGTGAGGAGCAGGAGGGAGTCCT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01069.hp2 HG01261.hp1 HG02027.hp2 others(12): Show HG01069.hp2 HG01261.hp1 HG02027.hp2 HG02293.hp1 HG02451.hp1 HG02486.hp1 HG02735.hp1 HG02818.hp1 HG02886.hp1 HG03041.hp1 HG03453.hp2 HG04199.hp1 HG04228.hp1 NA19240.hp2 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0036 a0001c0001t0001g0003 a0001c0001t0001g0036	15	375	0.0400	45	c.-34 others(56): Show c.-3486_-3485insGTGTGAGGAGGAGGGAGTGCTGTGTGAGGAGCAG GAGGGAGTCCT	LY6E	ENSG00000160932.11	transcript	ENST00000292494.11	protein_coding		3370		chr8	TogoVar
LY9_chr1_160791174_160833255	160828847	A A	AGAAAGAA others(38): Show AGAAAGAAAGAAAGAAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02647.hp2 HG02647.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0077 a0001c0001t0002g0077	1	389	0.0026	45	c.10 others(56): Show c.1031_*1032insGAAAGAAAGAAAGAAAGAAAGGAAGGAAGGAAGG AAGGAAGGAAG	LY9	ENSG00000122224.18	transcript	ENST00000263285.11	protein_coding		593		chr1	TogoVar
LYRM4_chr6_5103419_5265950	5148445	T T	TTCTGAAT others(38): Show TTCTGAATCGTAATCCTGAGCTGGGCTGGGGGCGCAGAGTCAGAAC	intron_variant intron_variant	MODIFIER	HG01081.hp1 HG02615.hp2 HG02622.hp2 others(6): Show HG01081.hp1 HG02615.hp2 HG02622.hp2 HG02738.hp1 HG03486.hp2 HG03491.hp2 HG06807.hp2 NA18963.hp1 NA19003.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0007 a0001c0001t0011 a0001c0001t0017 others(5): Show a0001c0001t0007 a0001c0001t0011 a0001c0001t0017 a0002c0002t0002 a0002c0002t0005 a0002c0002t0006 a0002c0002t0008 a0002c0002t0018	a0001c0001t0007g0175 a0001c0001t0011g0172 a0001c0001t0011g0178 others(6): Show a0001c0001t0007g0175 a0001c0001t0011g0172 a0001c0001t0011g0178 a0001c0001t0017g0192 a0002c0002t0002g0001 a0002c0002t0005g0230 a0002c0002t0006g0201 a0002c0002t0008g0215 a0002c0002t0018g0188	9	84	0.1071	45	c.208 others(64): Show c.208-38955_208-38954insGTTCTGACTCTGCGCCCCCAGCCCAG CTCAGGATTACGATTCAGA	LYRM4	ENSG00000214113.11	transcript	ENST00000330636.9	protein_coding	2/2			chr6	TogoVar
LYST_chr1_235656041_235871906	235755388	C C	CAAAAGAA others(38): Show CAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAG	intron_variant intron_variant	MODIFIER	HG03486.hp1 HG03486.hp1	a0003 a0003	a0003c0008 a0003c0008	a0003c0008t0003 a0003c0008t0003	a0003c0008t0003g0025 a0003c0008t0003g0025	1	47	0.0213	45	c.722 others(60): Show c.7229+89_7229+90insCTTTTCTTTTCTTTTCTTTTCTTTTCTTTT CTTTTCTTTTCTTTT	LYST	ENSG00000143669.16	transcript	ENST00000389793.7	protein_coding	25/52			chr1	TogoVar
LYZL2_chr10_30606779_30634753	30611718	G G	GAAAGAAA others(38): Show GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01515.hp1 NA18959.hp2 NA19065.hp2 HG01515.hp1 NA18959.hp2 NA19065.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0233 a0001c0001t0001g0234 a0001c0001t0001g0385 a0001c0001t0001g0233 a0001c0001t0001g0234 a0001c0001t0001g0385	3	311	0.0096	45	c.23 others(54): Show c.236_*237insTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT TCTTTCTTT	LYZL2	ENSG00000151033.10	transcript	ENST00000647634.2	protein_coding		60		chr10	TogoVar
MACF1_chr1_39199695_39492138	39477094	C C	CATACACA others(38): Show CATACACACACATATATACACTTAGTGTATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02280.hp1 HG02280.hp1	a0004 a0004	a0004c0011 a0004c0011	a0004c0011t0003 a0004c0011t0003	a0004c0011t0003g0170 a0004c0011t0003g0170	1	137	0.0073	45	c.219 others(66): Show c.21959-2703_21959-2702insTACACACACATATATACACTTAGT GTATATATATATATATATATA	MACF1	ENSG00000127603.32	transcript	ENST00000564288.6	protein_coding	97/100		INFO_REALIGN_3_PRIME	chr1	TogoVar
MACIR_chr5_103253763_103283660	103261646	C C	CTTTCTTT others(38): Show CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT	intron_variant intron_variant	MODIFIER	HG02818.hp1 NA19002.hp2 NA19010.hp1 HG02818.hp1 NA19002.hp2 NA19010.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0071 a0001c0001t0002g0209 a0001c0001t0002g0210 a0001c0001t0002g0071 a0001c0001t0002g0209 a0001c0001t0002g0210	3	347	0.0086	45	c.-11 others(64): Show c.-114+2753_-114+2797dupTCTTTCTTTCTTTCTTTCTTTCTTTC TTTCTTTCTTTCTTTCTTT	MACIR	ENSG00000181751.10	transcript	ENST00000319933.7	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr5	TogoVar

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