view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
CNTN4_chr3_2093866_3062959 | 2340710 | T | TATATATA others(39): Show |
intron_variant | MODIFIER | HG02486.hp2 | a0007 | a0007c0018 | a0007c0018t0003 | a0007c0018t0003g0062 | 1 | 15 | 0.0667 | 46 | c.-89 others(63): Show |
CNTN4 | ENSG00000144619.15 | transcript | ENST00000418658.6 | protein_coding | 3/24 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
CNTN4_chr3_2093866_3062959 | 2881554 | A | AAGTGAGT others(39): Show |
intron_variant | MODIFIER | HG00639.hp2 HG02683.hp2 HG03209.hp2 |
a0001 | a0001c0003a0001c0005 | a0001c0003t0001a0001c0003t0002a0001c0005t0006 | a0001c0003t0001g0094 a0001c0003t0002g0061 a0001c0005t0006g0035 |
3 | 16 | 0.1875 | 46 | c.653 others(63): Show |
CNTN4 | ENSG00000144619.15 | transcript | ENST00000418658.6 | protein_coding | 8/24 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
CNTN5_chr11_99015949_100363885 | 99077196 | A | ATATAGGT others(39): Show |
intron_variant | MODIFIER | HG01081.hp2 NA20300.hp1 |
a0001 | a0001c0001 | a0001c0001t0005a0001c0001t0010 | a0001c0001t0005g0048 a0001c0001t0010g0047 |
2 | 66 | 0.0303 | 46 | c.-21 others(67): Show |
CNTN5 | ENSG00000149972.12 | transcript | ENST00000524871.6 | protein_coding | 1/24 | chr11 | TogoVar | |||||||
CNTNAP2_chr7_146111801_148425998 | 146721889 | A | ATATATAT others(39): Show |
intron_variant | MODIFIER | HG02886.hp2 | a0001 | a0001c0005 | a0001c0005t0022 | a0001c0005t0022g0032 | 1 | 14 | 0.0714 | 46 | c.98- others(63): Show |
CNTNAP2 | ENSG00000174469.23 | transcript | ENST00000361727.8 | protein_coding | 1/23 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
CNTNAP3B_chr9_41885536_42134426 | 41934112 | T | TATATATA others(39): Show |
intron_variant | MODIFIER | HG01934.hp2 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0063 | 1 | 83 | 0.0120 | 46 | c.223 others(65): Show |
CNTNAP3B | ENSG00000154529.15 | transcript | ENST00000377561.7 | protein_coding | 14/23 | chr9 | TogoVar | |||||||
CNTNAP3B_chr9_41885536_42134426 | 42090783 | C | CATATGTG others(39): Show |
intron_variant | MODIFIER | HG01175.hp1 HG01516.hp2 HG02040.hp2 others(4): Show |
a0001a0006a0010others(2): Show | a0001c0001a0006c0041a0010c0013others(2): Show | a0001c0001t0002a0001c0001t0003a0006c0041t0002others(3): Show | a0001c0001t0002g0022 a0001c0001t0002g0024 a0001c0001t0003g0099 others(4): Show |
7 | 63 | 0.1111 | 46 | c.197 others(65): Show |
CNTNAP3B | ENSG00000154529.15 | transcript | ENST00000377561.7 | protein_coding | 2/23 | chr9 | TogoVar | |||||||
CNTNAP3B_chr9_41885536_42134426 | 42090783 | C | CATATGTG others(39): Show |
intron_variant | MODIFIER | HG02486.hp2 | a0001 | a0001c0046 | a0001c0046t0016 | a0001c0046t0016g0015 | 1 | 57 | 0.0175 | 46 | c.197 others(65): Show |
CNTNAP3B | ENSG00000154529.15 | transcript | ENST00000377561.7 | protein_coding | 2/23 | chr9 | TogoVar | |||||||
CNTNAP4_chr16_76272401_76565757 | 76460773 | A | AAAAAAAA others(39): Show |
intron_variant | MODIFIER | HG02486.hp2 | a0001 | a0001c0001 | a0001c0001t0005 | a0001c0001t0005g0202 | 1 | 104 | 0.0096 | 46 | c.133 others(65): Show |
CNTNAP4 | ENSG00000152910.19 | transcript | ENST00000611870.5 | protein_coding | 8/23 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
CNTNAP4_chr16_76272401_76565757 | 76470482 | A | AATATATA others(39): Show |
intron_variant | MODIFIER | HG00621.hp2 HG03540.hp1 NA18522.hp2 others(1): Show |
a0001a0003a0019others(1): Show | a0001c0004a0003c0003a0019c0041others(1): Show | a0001c0004t0003a0003c0003t0018a0019c0041t0004others(1): Show | a0001c0004t0003g0213 a0003c0003t0018g0164 a0019c0041t0004g0193 others(1): Show |
4 | 101 | 0.0396 | 46 | c.165 others(65): Show |
CNTNAP4 | ENSG00000152910.19 | transcript | ENST00000611870.5 | protein_coding | 10/23 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
CNTNAP5_chr2_124020287_124926219 | 124510301 | C | CTATATAT others(39): Show |
intron_variant | MODIFIER | HG02293.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0050 | 1 | 12 | 0.0833 | 46 | c.132 others(65): Show |
CNTNAP5 | ENSG00000155052.15 | transcript | ENST00000682447.1 | protein_coding | 8/23 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
CNTNAP5_chr2_124020287_124926219 | 124510301 | C | CTATATCT others(39): Show |
intron_variant | MODIFIER | HG03704.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0048 | 1 | 12 | 0.0833 | 46 | c.132 others(65): Show |
CNTNAP5 | ENSG00000155052.15 | transcript | ENST00000682447.1 | protein_coding | 8/23 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
CNTNAP5_chr2_124020287_124926219 | 124510307 | A | ATATATAT others(39): Show |
intron_variant | MODIFIER | HG02145.hp1 HG03139.hp2 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0009 | a0001c0001t0001g0033 a0001c0001t0009g0061 |
2 | 62 | 0.0323 | 46 | c.132 others(65): Show |
CNTNAP5 | ENSG00000155052.15 | transcript | ENST00000682447.1 | protein_coding | 8/23 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
CNTNAP5_chr2_124020287_124926219 | 124571527 | C | CTTTTTCT others(39): Show |
intron_variant | MODIFIER | HG03130.hp1 | a0005 | a0005c0003 | a0005c0003t0008 | a0005c0003t0008g0036 | 1 | 7 | 0.1429 | 46 | c.175 others(65): Show |
CNTNAP5 | ENSG00000155052.15 | transcript | ENST00000682447.1 | protein_coding | 11/23 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
CNTNAP5_chr2_124020287_124926219 | 124703205 | T | TCCTTCTT others(39): Show |
intron_variant | MODIFIER | HG02886.hp2 HG02897.hp1 HG03098.hp1 others(1): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0006a0001c0001t0009others(1): Show | a0001c0001t0001g0002 a0001c0001t0006g0040 a0001c0001t0009g0061 others(1): Show |
4 | 62 | 0.0645 | 46 | c.207 others(67): Show |
CNTNAP5 | ENSG00000155052.15 | transcript | ENST00000682447.1 | protein_coding | 13/23 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
CNTNAP5_chr2_124020287_124926219 | 124786523 | G | GAAAGAAA others(39): Show |
intron_variant | MODIFIER | HG02145.hp2 | a0002 | a0002c0008 | a0002c0008t0001 | a0002c0008t0001g0039 | 1 | 59 | 0.0169 | 46 | c.275 others(65): Show |
CNTNAP5 | ENSG00000155052.15 | transcript | ENST00000682447.1 | protein_coding | 17/23 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
COA6_chr1_234368456_234390080 | 234383064 | G | GAGGGAGG others(39): Show |
intron_variant | MODIFIER | NA20129.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0120 | 1 | 386 | 0.0026 | 46 | c.373 others(61): Show |
COA6 | ENSG00000168275.16 | transcript | ENST00000366615.10 | protein_coding | 2/2 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
COBLL1_chr2_164675188_164846823 | 164805330 | T | TATATATA others(39): Show |
intron_variant | MODIFIER | HG03453.hp1 | a0001 | a0001c0002 | a0001c0002t0049 | a0001c0002t0049g0005 | 1 | 196 | 0.0051 | 46 | c.41+ others(63): Show |
COBLL1 | ENSG00000082438.18 | transcript | ENST00000652658.2 | protein_coding | 2/13 | chr2 | TogoVar | |||||||
COG4_chr16_70475571_70528554 | 70483273 | C | CTCATCTC others(39): Show |
intron_variant | MODIFIER | HG01433.hp2 HG02258.hp1 HG02572.hp2 others(8): Show |
a0001 | a0001c0002a0001c0003 | a0001c0002t0001a0001c0003t0001 | a0001c0002t0001g0034 a0001c0002t0001g0072 a0001c0002t0001g0130 others(8): Show |
11 | 352 | 0.0313 | 46 | c.182 others(63): Show |
COG4 | ENSG00000103051.21 | transcript | ENST00000323786.10 | protein_coding | 14/18 | chr16 | TogoVar | |||||||
COG6_chr13_39650662_39757628 | 39706255 | T | TTATATAT others(39): Show |
intron_variant | MODIFIER | HG06807.hp2 NA18988.hp2 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0004 | a0001c0001t0001g0120 a0001c0001t0004g0127 |
2 | 28 | 0.0714 | 46 | c.128 others(65): Show |
COG6 | ENSG00000133103.17 | transcript | ENST00000455146.8 | protein_coding | 13/18 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | ||||||
COG6_chr13_39650662_39757628 | 39706255 | T | TTATATAT others(39): Show |
intron_variant | MODIFIER | NA18977.hp1 NA19080.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0006 a0001c0001t0001g0095 |
2 | 28 | 0.0714 | 46 | c.128 others(65): Show |
COG6 | ENSG00000133103.17 | transcript | ENST00000455146.8 | protein_coding | 13/18 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | ||||||
COG6_chr13_39650662_39757628 | 39706255 | T | TTATATAT others(39): Show |
intron_variant | MODIFIER | HG00323.hp1 HG01069.hp2 HG03225.hp2 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0015 | a0001c0001t0001g0023 a0001c0001t0001g0155 a0001c0001t0015g0201 |
3 | 29 | 0.1034 | 46 | c.128 others(65): Show |
COG6 | ENSG00000133103.17 | transcript | ENST00000455146.8 | protein_coding | 13/18 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | ||||||
COG7_chr16_23383493_23458189 | 23408132 | G | GGGCGGGA others(39): Show |
intron_variant | MODIFIER | HG03041.hp1 HG03139.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0175 a0001c0001t0001g0190 |
2 | 264 | 0.0076 | 46 | c.147 others(65): Show |
COG7 | ENSG00000168434.13 | transcript | ENST00000307149.10 | protein_coding | 11/16 | chr16 | TogoVar | |||||||
COL13A1_chr10_69796906_69964144 | 69810376 | G | GAGAGAGA others(39): Show |
intron_variant | MODIFIER | NA18998.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0083 | 1 | 240 | 0.0042 | 46 | c.294 others(63): Show |
COL13A1 | ENSG00000197467.17 | transcript | ENST00000645393.2 | protein_coding | 1/40 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
COL13A1_chr10_69796906_69964144 | 69810376 | G | GAGAGAGA others(39): Show |
intron_variant | MODIFIER | HG00642.hp2 HG00741.hp2 HG01975.hp1 others(5): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0001a0001c0002t0001a0001c0003t0002 | a0001c0001t0001g0081 a0001c0001t0001g0084 a0001c0001t0001g0122 others(5): Show |
8 | 247 | 0.0324 | 46 | c.294 others(63): Show |
COL13A1 | ENSG00000197467.17 | transcript | ENST00000645393.2 | protein_coding | 1/40 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
COL14A1_chr8_120120102_120378573 | 120200046 | A | AAAGCATA others(39): Show |
intron_variant | MODIFIER | HG03225.hp2 NA19043.hp1 |
a0002 | a0002c0017 | a0002c0017t0002 | a0002c0017t0002g0201 a0002c0017t0002g0202 |
2 | 133 | 0.0150 | 46 | c.877 others(61): Show |
COL14A1 | ENSG00000187955.13 | transcript | ENST00000297848.8 | protein_coding | 8/47 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
COL14A1_chr8_120120102_120378573 | 120200046 | A | AAAGCATA others(39): Show |
intron_variant | MODIFIER | HG00639.hp1 HG03139.hp2 |
a0002 | a0002c0006 | a0002c0006t0002a0002c0006t0006 | a0002c0006t0002g0074 a0002c0006t0006g0206 |
2 | 133 | 0.0150 | 46 | c.877 others(61): Show |
COL14A1 | ENSG00000187955.13 | transcript | ENST00000297848.8 | protein_coding | 8/47 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
COL14A1_chr8_120120102_120378573 | 120200046 | A | AAAGCATA others(39): Show |
intron_variant | MODIFIER | HG01106.hp2 HG04204.hp2 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003 | a0001c0001t0001g0103 a0001c0001t0003g0067 |
2 | 133 | 0.0150 | 46 | c.877 others(61): Show |
COL14A1 | ENSG00000187955.13 | transcript | ENST00000297848.8 | protein_coding | 8/47 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
COL18A1_chr21_45400165_45518720 | 45405287 | G | GCTGCGGG others(39): Show |
intron_variant | MODIFIER | HG01243.hp1 HG03540.hp1 NA19060.hp1 |
a0001 | a0001c0003a0001c0054a0001c0071 | a0001c0003t0001a0001c0054t0002a0001c0071t0004 | a0001c0003t0001g0167 a0001c0054t0002g0169 a0001c0071t0004g0168 |
3 | 95 | 0.0316 | 46 | c.11+ others(57): Show |
COL18A1 | ENSG00000182871.16 | transcript | ENST00000651438.1 | protein_coding | 1/41 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | ||||||
COL18A1_chr21_45400165_45518720 | 45405287 | G | GCTGCGGG others(39): Show |
intron_variant | MODIFIER | HG00423.hp1 HG00558.hp2 HG00609.hp1 others(15): Show |
a0001a0009 | a0001c0001a0001c0002a0001c0003others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0013others(7): Show | a0001c0001t0001g0256 a0001c0001t0001g0267 a0001c0001t0001g0269 others(15): Show |
18 | 110 | 0.1636 | 46 | c.11+ others(57): Show |
COL18A1 | ENSG00000182871.16 | transcript | ENST00000651438.1 | protein_coding | 1/41 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | ||||||
COL18A1_chr21_45400165_45518720 | 45501107 | G | GGTGTGTG others(39): Show |
intron_variant | MODIFIER | HG02451.hp2 | a0001 | a0001c0095 | a0001c0095t0001 | a0001c0095t0001g0006 | 1 | 204 | 0.0049 | 46 | c.268 others(65): Show |
COL18A1 | ENSG00000182871.16 | transcript | ENST00000651438.1 | protein_coding | 32/41 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | ||||||
COL19A1_chr6_69861556_70217468 | 69921481 | T | TATATATT others(39): Show |
intron_variant | MODIFIER | HG00741.hp1 HG01167.hp2 HG02109.hp1 others(12): Show |
a0001 | a0001c0001a0001c0002a0001c0005others(2): Show | a0001c0001t0001a0001c0001t0006a0001c0001t0009others(5): Show | a0001c0001t0001g0143 a0001c0001t0001g0153 a0001c0001t0001g0167 others(12): Show |
15 | 56 | 0.2679 | 46 | c.267 others(63): Show |
COL19A1 | ENSG00000082293.13 | transcript | ENST00000620364.5 | protein_coding | 4/50 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | ||||||
COL19A1_chr6_69861556_70217468 | 69921491 | T | TATATATT others(39): Show |
intron_variant | MODIFIER | HG02886.hp1 HG02895.hp2 HG02897.hp2 |
a0003 | a0003c0010 | a0003c0010t0013a0003c0010t0027 | a0003c0010t0013g0172 a0003c0010t0013g0173 a0003c0010t0027g0119 |
3 | 158 | 0.0190 | 46 | c.267 others(63): Show |
COL19A1 | ENSG00000082293.13 | transcript | ENST00000620364.5 | protein_coding | 4/50 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | ||||||
COL21A1_chr6_56051590_56252580 | 56098656 | A | AATATATA others(39): Show |
intron_variant | MODIFIER | HG01884.hp2 | a0001 | a0001c0001 | a0001c0001t0008 | a0001c0001t0008g0061 | 1 | 220 | 0.0045 | 46 | c.181 others(65): Show |
COL21A1 | ENSG00000124749.18 | transcript | ENST00000244728.10 | protein_coding | 17/29 | chr6 | TogoVar | |||||||
COL24A1_chr1_85724233_86161772 | 86082622 | T | TATATATT others(39): Show |
intron_variant | MODIFIER | HG01099.hp2 HG02055.hp2 HG02615.hp1 others(3): Show |
a0004a0018a0019others(1): Show | a0004c0002a0018c0025a0019c0039others(1): Show | a0004c0002t0002a0004c0002t0004a0018c0025t0004others(2): Show | a0004c0002t0002g0209 a0004c0002t0002g0214 a0004c0002t0004g0215 others(3): Show |
6 | 194 | 0.0309 | 46 | c.170 others(65): Show |
COL24A1 | ENSG00000171502.15 | transcript | ENST00000370571.7 | protein_coding | 7/59 | chr1 | TogoVar | |||||||
COL4A1_chr13_110143963_110312157 | 110252559 | T | TTGTATAT others(39): Show |
intron_variant | MODIFIER | HG00408.hp2 HG02602.hp1 HG02622.hp1 others(10): Show |
a0001a0002a0003others(3): Show | a0001c0001a0001c0003a0001c0006others(9): Show | a0001c0001t0001a0001c0003t0001a0001c0006t0001others(9): Show | a0001c0001t0001g0013 a0001c0003t0001g0105 a0001c0006t0001g0087 others(10): Show |
13 | 291 | 0.0447 | 46 | c.85- others(61): Show |
COL4A1 | ENSG00000187498.16 | transcript | ENST00000375820.10 | protein_coding | 1/51 | chr13 | TogoVar | |||||||
COL4A1_chr13_110143963_110312157 | 110252590 | T | TTGTATAT others(39): Show |
intron_variant | MODIFIER | NA19002.hp1 | a0001 | a0001c0003 | a0001c0003t0001 | a0001c0003t0001g0016 | 1 | 187 | 0.0053 | 46 | c.85- others(61): Show |
COL4A1 | ENSG00000187498.16 | transcript | ENST00000375820.10 | protein_coding | 1/51 | chr13 | TogoVar | |||||||
COL4A3_chr2_227159624_227319792 | 227249230 | A | ATATATAT others(39): Show |
intron_variant | MODIFIER | NA18995.hp1 | a0003 | a0003c0002 | a0003c0002t0003 | a0003c0002t0003g0326 | 1 | 56 | 0.0179 | 46 | c.546 others(61): Show |
COL4A3 | ENSG00000169031.21 | transcript | ENST00000396578.8 | protein_coding | 9/51 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
COL4A3_chr2_227159624_227319792 | 227249230 | A | ATATATAT others(39): Show |
intron_variant | MODIFIER | NA18963.hp1 NA18998.hp1 |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0165 a0001c0001t0002g0250 |
2 | 57 | 0.0351 | 46 | c.546 others(61): Show |
COL4A3 | ENSG00000169031.21 | transcript | ENST00000396578.8 | protein_coding | 9/51 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
COL5A2_chr2_189026898_189184761 | 189094588 | G | GACACACA others(39): Show |
intron_variant | MODIFIER | HG02683.hp1 NA18941.hp2 NA18961.hp1 others(1): Show |
a0001a0006 | a0001c0001a0006c0011 | a0001c0001t0001a0006c0011t0001 | a0001c0001t0001g0087 a0001c0001t0001g0102 a0001c0001t0001g0111 others(1): Show |
4 | 23 | 0.1739 | 46 | c.457 others(63): Show |
COL5A2 | ENSG00000204262.14 | transcript | ENST00000374866.9 | protein_coding | 6/53 | chr2 | TogoVar | |||||||
COL5A2_chr2_189026898_189184761 | 189157133 | T | TATAGATA others(39): Show |
intron_variant | MODIFIER | HG00408.hp1 HG00423.hp2 HG00609.hp2 others(55): Show |
a0001a0002a0008others(1): Show | a0001c0001a0001c0002a0001c0004others(4): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0008others(13): Show | a0001c0001t0001g0044 a0001c0001t0001g0133 a0001c0001t0001g0155 others(55): Show |
58 | 184 | 0.3152 | 46 | c.97+ others(63): Show |
COL5A2 | ENSG00000204262.14 | transcript | ENST00000374866.9 | protein_coding | 1/53 | chr2 | TogoVar | |||||||
COL6A1_chr21_45976770_46010048 | 45987814 | G | GGGGTCCA others(39): Show |
intron_variant | MODIFIER | HG02258.hp1 HG02451.hp2 |
a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0041 a0002c0002t0001g0120 |
2 | 126 | 0.0159 | 46 | c.804 others(61): Show |
COL6A1 | ENSG00000142156.16 | transcript | ENST00000361866.8 | protein_coding | 8/34 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | ||||||
COL6A1_chr21_45976770_46010048 | 45987816 | G | GGTCCAGA others(39): Show |
intron_variant | MODIFIER | HG00642.hp2 HG02630.hp1 |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0002a0002c0002t0009 | a0001c0001t0002g0105 a0002c0002t0009g0084 |
2 | 88 | 0.0227 | 46 | c.804 others(61): Show |
COL6A1 | ENSG00000142156.16 | transcript | ENST00000361866.8 | protein_coding | 8/34 | chr21 | TogoVar | |||||||
COL6A1_chr21_45976770_46010048 | 45987978 | G | GGTCCAGA others(39): Show |
intron_variant | MODIFIER | HG01255.hp2 | a0002 | a0002c0002 | a0002c0002t0008 | a0002c0002t0008g0117 | 1 | 125 | 0.0080 | 46 | c.804 others(61): Show |
COL6A1 | ENSG00000142156.16 | transcript | ENST00000361866.8 | protein_coding | 8/34 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | ||||||
COL6A1_chr21_45976770_46010048 | 45988097 | C | CTCCAGAT others(39): Show |
intron_variant | MODIFIER | HG02809.hp2 | a0011 | a0011c0027 | a0011c0027t0005 | a0011c0027t0005g0076 | 1 | 88 | 0.0114 | 46 | c.804 others(61): Show |
COL6A1 | ENSG00000142156.16 | transcript | ENST00000361866.8 | protein_coding | 8/34 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | ||||||
COL6A1_chr21_45976770_46010048 | 45988350 | G | GGGGTCCA others(39): Show |
intron_variant | MODIFIER | HG02559.hp2 | a0001 | a0001c0018 | a0001c0018t0001 | a0001c0018t0001g0049 | 1 | 121 | 0.0083 | 46 | c.804 others(61): Show |
COL6A1 | ENSG00000142156.16 | transcript | ENST00000361866.8 | protein_coding | 8/34 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | ||||||
COL6A6_chr3_130512177_130682042 | 130636912 | T | TCCCCTCC others(39): Show |
intron_variant | MODIFIER | NA18982.hp2 NA19002.hp1 |
a0001a0002 | a0001c0001a0002c0049 | a0001c0001t0001a0002c0049t0003 | a0001c0001t0001g0188 a0002c0049t0003g0189 |
2 | 158 | 0.0127 | 46 | c.509 others(65): Show |
COL6A6 | ENSG00000206384.11 | transcript | ENST00000358511.11 | protein_coding | 28/36 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
COL9A2_chr1_40295489_40322286 | 40318314 | A | ATATATAT others(39): Show |
upstream_gene_variant | MODIFIER | HG00544.hp2 NA19090.hp1 |
a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0007 a0001c0002t0001g0013 |
2 | 130 | 0.0154 | 46 | c.-11 others(57): Show |
COL9A2 | ENSG00000049089.15 | transcript | ENST00000372748.8 | protein_coding | 1029 | chr1 | TogoVar | |||||||
COL9A2_chr1_40295489_40322286 | 40318314 | A | ATATATAT others(39): Show |
upstream_gene_variant | MODIFIER | HG02074.hp1 NA19090.hp2 |
a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0007 | 2 | 130 | 0.0154 | 46 | c.-11 others(57): Show |
COL9A2 | ENSG00000049089.15 | transcript | ENST00000372748.8 | protein_coding | 1029 | chr1 | TogoVar | |||||||
COL9A2_chr1_40295489_40322286 | 40318314 | A | ATATATAT others(39): Show |
upstream_gene_variant | MODIFIER | HG01261.hp2 | a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0082 | 1 | 129 | 0.0078 | 46 | c.-11 others(57): Show |
COL9A2 | ENSG00000049089.15 | transcript | ENST00000372748.8 | protein_coding | 1029 | chr1 | TogoVar | |||||||
COMMD9_chr11_36267292_36294424 | 36270137 | T | TAGAGAGA others(39): Show |
downstream_gene_variant | MODIFIER | HG01978.hp1 NA19064.hp2 |
a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0009 a0001c0001t0003g0019 |
2 | 41 | 0.0488 | 46 | c.*44 others(57): Show |
COMMD9 | ENSG00000110442.12 | transcript | ENST00000263401.10 | protein_coding | 2154 | chr11 | TogoVar |