regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SLC16A2_chrX_74416493_74538916 | 74420673 | T | TGGCCCGG others(42): Show |
upstream_gene_variant | MODIFIER | HG03540.hp1 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0030 | 1 | 235 | 0.0043 | 49 | c.-96 others(58): Show |
SLC16A2 | ENSG00000147100.11 | transcript | ENST00000587091.6 | protein_coding | 819 | chrX | TogoVar | ||||||
SLC17A5_chr6_73588379_73658992 | 73601481 | T | TGGCCAGC others(42): Show |
intron_variant | MODIFIER | NA18906.hp1 | a0001 | a0001c0001 | a0001c0001t0009 | a0001c0001t0009g0009 | 1 | 324 | 0.0031 | 49 | c.126 others(68): Show |
SLC17A5 | ENSG00000119899.13 | transcript | ENST00000355773.6 | protein_coding | 9/10 | chr6 | TogoVar | ||||||
SLC18B1_chr6_132764370_132803637 | 132792288 | A | AAAGAAAG others(42): Show |
intron_variant | MODIFIER | HG01175.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0213 | 1 | 304 | 0.0033 | 49 | c.184 others(66): Show |
SLC18B1 | ENSG00000146409.12 | transcript | ENST00000275227.9 | protein_coding | 2/13 | chr6 | TogoVar | ||||||
SLC23A2_chr20_4847358_5006510 | 5005351 | A | ATTTTCCA others(42): Show |
upstream_gene_variant | MODIFIER | HG02886.hp2 | a0001 | a0001c0013 | a0001c0013t0018 | a0001c0013t0018g0045 | 1 | 204 | 0.0049 | 49 | c.-42 others(60): Show |
SLC23A2 | ENSG00000089057.15 | transcript | ENST00000338244.6 | protein_coding | 3842 | chr20 | TogoVar | ||||||
SLC24A4_chr14_92318165_92506481 | 92393055 | G | GCCATCTA others(42): Show |
intron_variant | MODIFIER | HG00408.hp1 HG00621.hp2 HG00733.hp2 others(24): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0003a0001c0001t0004a0001c0001t0012others(14): Show | a0001c0001t0003g0273a0001c0001t0004g0065a0001c0001t0004g0268others(24): Show | 27 | 282 | 0.0957 | 49 | c.242 others(68): Show |
SLC24A4 | ENSG00000140090.18 | transcript | ENST00000532405.6 | protein_coding | 2/16 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | |||||
SLC25A4_chr4_185138266_185155382 | 185141271 | T | TCTTTCTT others(42): Show |
upstream_gene_variant | MODIFIER | HG00609.hp2 NA19002.hp1 NA19080.hp2 |
a0001 | a0001c0001 | a0001c0001t0005a0001c0001t0009 | a0001c0001t0005g0008a0001c0001t0009g0004 | 3 | 444 | 0.0068 | 49 | c.-21 others(60): Show |
SLC25A4 | ENSG00000151729.11 | transcript | ENST00000281456.11 | protein_coding | 1994 | chr4 | TogoVar | ||||||
SLC25A6_chrX_1381152_1397113 | 1392970 | C | CCTCCCTC others(42): Show |
upstream_gene_variant | MODIFIER | HG02897.hp2 HG03540.hp1 NA18906.hp1 |
a0001a0009 | a0001c0002a0009c0016 | a0001c0002t0001a0009c0016t0001 | a0001c0002t0001g0007a0009c0016t0001g0030 | 3 | 196 | 0.0153 | 49 | c.-96 others(58): Show |
SLC25A6 | ENSG00000169100.14 | transcript | ENST00000381401.11 | protein_coding | 858 | chrX | TogoVar | ||||||
SLC2A14_chr12_7807514_7877915 | 7826858 | C | CTTCCTTC others(42): Show |
intron_variant | MODIFIER | NA18955.hp1 | a0001 | a0001c0003 | a0001c0003t0001 | a0001c0003t0001g0153 | 1 | 350 | 0.0029 | 49 | c.864 others(64): Show |
SLC2A14 | ENSG00000173262.12 | transcript | ENST00000431042.7 | protein_coding | 7/10 | chr12 | TogoVar | ||||||
SLC2A5_chr1_9030106_9074635 | 9053041 | T | TTATATAT others(42): Show |
intron_variant | MODIFIER | HG02004.hp2 | a0001 | a0001c0001 | a0001c0001t0005 | a0001c0001t0005g0031 | 1 | 336 | 0.0030 | 49 | c.293 others(66): Show |
SLC2A5 | ENSG00000142583.18 | transcript | ENST00000377424.9 | protein_coding | 3/11 | chr1 | TogoVar | ||||||
SLC2A5_chr1_9030106_9074635 | 9053050 | A | AATATATA others(42): Show |
intron_variant | MODIFIER | HG01243.hp1 HG03195.hp2 HG03471.hp1 |
a0001 | a0001c0001 | a0001c0001t0016 | a0001c0001t0016g0044a0001c0001t0016g0045a0001c0001t0016g0046 | 3 | 336 | 0.0089 | 49 | c.293 others(66): Show |
SLC2A5 | ENSG00000142583.18 | transcript | ENST00000377424.9 | protein_coding | 3/11 | chr1 | TogoVar | ||||||
SLC2A5_chr1_9030106_9074635 | 9053090 | A | ATATATAT others(42): Show |
intron_variant | MODIFIER | HG02896.hp2 HG02897.hp2 |
a0001 | a0001c0001 | a0001c0001t0004a0001c0001t0014 | a0001c0001t0004g0246a0001c0001t0014g0241 | 2 | 336 | 0.0060 | 49 | c.293 others(66): Show |
SLC2A5 | ENSG00000142583.18 | transcript | ENST00000377424.9 | protein_coding | 3/11 | chr1 | TogoVar | ||||||
SLC2A5_chr1_9030106_9074635 | 9053455 | A | ATATATAT others(42): Show |
intron_variant | MODIFIER | NA18955.hp1 NA19063.hp2 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0029 | a0001c0001t0001g0316a0001c0001t0029g0306 | 2 | 336 | 0.0060 | 49 | c.293 others(66): Show |
SLC2A5 | ENSG00000142583.18 | transcript | ENST00000377424.9 | protein_coding | 3/11 | chr1 | TogoVar | ||||||
SLC35F3_chr1_233899676_234329511 | 234108255 | A | ATTATTTA others(42): Show |
intron_variant | MODIFIER | HG02083.hp2 | a0001 | a0001c0002 | a0001c0002t0002 | a0001c0002t0002g0027 | 1 | 158 | 0.0063 | 49 | c.284 others(70): Show |
SLC35F3 | ENSG00000183780.13 | transcript | ENST00000366618.8 | protein_coding | 2/7 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
SLC37A3_chr7_140328752_140403530 | 140362568 | C | CGGCCAGC others(42): Show |
intron_variant | MODIFIER | HG00408.hp2 HG02818.hp1 HG04228.hp1 others(1): Show |
a0001a0002 | a0001c0015a0002c0007 | a0001c0015t0005a0002c0007t0001a0002c0007t0002 | a0001c0015t0005g0238a0002c0007t0001g0236a0002c0007t0001g0320others(1): Show | 4 | 346 | 0.0116 | 49 | c.375 others(66): Show |
SLC37A3 | ENSG00000157800.18 | transcript | ENST00000326232.14 | protein_coding | 5/14 | chr7 | TogoVar | ||||||
SLC38A9_chr5_55620848_55717324 | 55695922 | C | CGGGGCGG others(42): Show |
intron_variant | MODIFIER | HG01517.hp1 HG02922.hp1 HG03041.hp1 others(3): Show |
a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0255a0002c0002t0001g0256a0002c0002t0001g0257others(3): Show | 6 | 350 | 0.0171 | 49 | c.113 others(66): Show |
SLC38A9 | ENSG00000177058.12 | transcript | ENST00000396865.7 | protein_coding | 3/15 | chr5 | TogoVar | ||||||
SLC38A9_chr5_55620848_55717324 | 55695935 | C | CGGGCGGG others(42): Show |
intron_variant | MODIFIER | HG00140.hp2 HG00280.hp2 HG00323.hp1 others(126): Show |
a0002a0004a0005others(1): Show | a0002c0002a0002c0011a0002c0013others(3): Show | a0002c0002t0001a0002c0011t0001a0002c0013t0001others(3): Show | a0002c0002t0001g0210a0002c0002t0001g0211a0002c0002t0001g0212others(126): Show | 129 | 350 | 0.3686 | 49 | c.113 others(66): Show |
SLC38A9 | ENSG00000177058.12 | transcript | ENST00000396865.7 | protein_coding | 3/15 | chr5 | TogoVar | ||||||
SLC38A9_chr5_55620848_55717324 | 55696001 | G | GGGGCGGC others(42): Show |
intron_variant | MODIFIER | HG00140.hp2 HG00280.hp2 HG00323.hp1 others(120): Show |
a0002a0004a0005others(1): Show | a0002c0002a0002c0011a0002c0013others(3): Show | a0002c0002t0001a0002c0011t0001a0002c0013t0001others(3): Show | a0002c0002t0001g0210a0002c0002t0001g0211a0002c0002t0001g0212others(120): Show | 123 | 350 | 0.3514 | 49 | c.113 others(66): Show |
SLC38A9 | ENSG00000177058.12 | transcript | ENST00000396865.7 | protein_coding | 3/15 | chr5 | TogoVar | ||||||
SLC38A9_chr5_55620848_55717324 | 55696001 | G | GGGGCGGC others(42): Show |
intron_variant | MODIFIER | HG02135.hp2 NA19072.hp1 |
a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0329a0002c0002t0001g0330 | 2 | 350 | 0.0057 | 49 | c.113 others(66): Show |
SLC38A9 | ENSG00000177058.12 | transcript | ENST00000396865.7 | protein_coding | 3/15 | chr5 | TogoVar | ||||||
SLC41A3_chr3_126001357_126089124 | 126059263 | G | GAAAGAAA others(42): Show |
intron_variant | MODIFIER | HG02486.hp2 | a0003 | a0003c0004 | a0003c0004t0001 | a0003c0004t0001g0324 | 1 | 370 | 0.0027 | 49 | c.274 others(66): Show |
SLC41A3 | ENSG00000114544.17 | transcript | ENST00000360370.9 | protein_coding | 2/10 | chr3 | TogoVar | ||||||
SLC7A10_chr19_33203664_33230850 | 33215583 | A | ACCCCCAC others(42): Show |
intron_variant | MODIFIER | NA18956.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0038 | 1 | 410 | 0.0024 | 49 | c.356 others(64): Show |
SLC7A10 | ENSG00000130876.11 | transcript | ENST00000253188.8 | protein_coding | 2/10 | chr19 | TogoVar | ||||||
SLC9A2_chr2_102614553_102716355 | 102695791 | A | ATATATAT others(42): Show |
intron_variant | MODIFIER | HG00639.hp2 HG00738.hp2 HG01106.hp2 others(20): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0003a0001c0001t0010a0001c0003t0003 | a0001c0001t0003g0024a0001c0001t0003g0026a0001c0001t0003g0038others(20): Show | 23 | 344 | 0.0669 | 49 | c.158 others(66): Show |
SLC9A2 | ENSG00000115616.3 | transcript | ENST00000233969.3 | protein_coding | 7/11 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
SLCO4A1_chr20_62637503_62677293 | 62666118 | G | GCCCCCCC others(42): Show |
intron_variant | MODIFIER | HG03540.hp2 HG03704.hp2 |
a0001 | a0001c0001a0001c0007 | a0001c0001t0003a0001c0007t0002 | a0001c0001t0003g0356a0001c0007t0002g0044 | 2 | 432 | 0.0046 | 49 | c.127 others(66): Show |
SLCO4A1 | ENSG00000101187.16 | transcript | ENST00000217159.6 | protein_coding | 6/11 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | |||||
SLCO5A1_chr8_69662046_69839978 | 69772563 | A | AGAAAGAA others(42): Show |
intron_variant | MODIFIER | NA18959.hp1 | a0002 | a0002c0002 | a0002c0002t0002 | a0002c0002t0002g0056 | 1 | 280 | 0.0036 | 49 | c.908 others(68): Show |
SLCO5A1 | ENSG00000137571.11 | transcript | ENST00000260126.9 | protein_coding | 2/9 | chr8 | TogoVar | ||||||
SLPI_chr20_45247239_45259564 | 45258278 | A | AGATATAG others(42): Show |
upstream_gene_variant | MODIFIER | HG02976.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0015 | 1 | 398 | 0.0025 | 49 | c.-37 others(60): Show |
SLPI | ENSG00000124107.5 | transcript | ENST00000338380.2 | protein_coding | 3715 | chr20 | TogoVar | ||||||
SLURP2_chr8_142759338_142774828 | 142760427 | A | ACAATCCA others(42): Show |
downstream_gene_variant | MODIFIER | NA18948.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0019 | 1 | 446 | 0.0022 | 49 | c.*41 others(60): Show |
SLURP2 | ENSG00000283992.2 | transcript | ENST00000317543.12 | protein_coding | 3910 | chr8 | TogoVar | ||||||
SLURP2_chr8_142759338_142774828 | 142760574 | C | CCAATCCA others(42): Show |
downstream_gene_variant | MODIFIER | NA19003.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0003 | 1 | 446 | 0.0022 | 49 | c.*40 others(60): Show |
SLURP2 | ENSG00000283992.2 | transcript | ENST00000317543.12 | protein_coding | 3763 | chr8 | TogoVar | ||||||
SLURP2_chr8_142759338_142774828 | 142760619 | C | CCATACAA others(42): Show |
downstream_gene_variant | MODIFIER | HG00280.hp1 HG00408.hp2 HG00423.hp1 others(98): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003 | a0001c0001t0001g0002a0001c0001t0001g0008a0001c0001t0001g0019others(27): Show | 101 | 446 | 0.2265 | 49 | c.*39 others(60): Show |
SLURP2 | ENSG00000283992.2 | transcript | ENST00000317543.12 | protein_coding | 3718 | chr8 | TogoVar | ||||||
SLURP2_chr8_142759338_142774828 | 142760766 | C | CCATACAA others(42): Show |
downstream_gene_variant | MODIFIER | HG00140.hp2 HG00438.hp1 HG00738.hp1 others(27): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(1): Show | a0001c0001t0001g0001a0001c0001t0001g0004a0001c0001t0001g0008others(13): Show | 30 | 446 | 0.0673 | 49 | c.*38 others(60): Show |
SLURP2 | ENSG00000283992.2 | transcript | ENST00000317543.12 | protein_coding | 3571 | chr8 | TogoVar | ||||||
SLURP2_chr8_142759338_142774828 | 142760770 | A | ACAATCCA others(42): Show |
downstream_gene_variant | MODIFIER | HG02615.hp1 | a0001 | a0001c0001 | a0001c0001t0004 | a0001c0001t0004g0042 | 1 | 446 | 0.0022 | 49 | c.*38 others(60): Show |
SLURP2 | ENSG00000283992.2 | transcript | ENST00000317543.12 | protein_coding | 3567 | chr8 | TogoVar | ||||||
SLURP2_chr8_142759338_142774828 | 142760794 | A | AATTCAGT others(42): Show |
downstream_gene_variant | MODIFIER | NA19063.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0005 | 1 | 446 | 0.0022 | 49 | c.*38 others(60): Show |
SLURP2 | ENSG00000283992.2 | transcript | ENST00000317543.12 | protein_coding | 3543 | chr8 | TogoVar | ||||||
SLURP2_chr8_142759338_142774828 | 142760913 | C | CCATACAA others(42): Show |
downstream_gene_variant | MODIFIER | HG02109.hp2 HG02572.hp1 HG02970.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0004 | a0001c0001t0002g0098a0001c0001t0004g0027a0001c0001t0004g0097 | 5 | 446 | 0.0112 | 49 | c.*36 others(60): Show |
SLURP2 | ENSG00000283992.2 | transcript | ENST00000317543.12 | protein_coding | 3424 | chr8 | TogoVar | ||||||
SLURP2_chr8_142759338_142774828 | 142760913 | C | CCATACAA others(42): Show |
downstream_gene_variant | MODIFIER | HG00099.hp2 HG00140.hp1 HG00408.hp1 others(122): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(4): Show | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0004others(38): Show | 125 | 446 | 0.2803 | 49 | c.*36 others(60): Show |
SLURP2 | ENSG00000283992.2 | transcript | ENST00000317543.12 | protein_coding | 3424 | chr8 | TogoVar | ||||||
SLURP2_chr8_142759338_142774828 | 142761037 | G | GTAATTCA others(42): Show |
downstream_gene_variant | MODIFIER | HG00639.hp1 HG00733.hp2 HG01069.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0006a0001c0001t0001g0111 | 3 | 446 | 0.0067 | 49 | c.*35 others(60): Show |
SLURP2 | ENSG00000283992.2 | transcript | ENST00000317543.12 | protein_coding | 3300 | chr8 | TogoVar | ||||||
SMAD2_chr18_47803957_47935659 | 47850669 | A | ATATATTA others(42): Show |
intron_variant | MODIFIER | HG02055.hp1 | a0001 | a0001c0001 | a0001c0001t0244 | a0001c0001t0244g0122 | 1 | 310 | 0.0032 | 49 | c.784 others(64): Show |
SMAD2 | ENSG00000175387.16 | transcript | ENST00000262160.11 | protein_coding | 7/10 | chr18 | TogoVar | ||||||
SMAD2_chr18_47803957_47935659 | 47850755 | A | ATATATTA others(42): Show |
intron_variant | MODIFIER | NA19002.hp1 | a0001 | a0001c0001 | a0001c0001t0235 | a0001c0001t0235g0173 | 1 | 310 | 0.0032 | 49 | c.784 others(64): Show |
SMAD2 | ENSG00000175387.16 | transcript | ENST00000262160.11 | protein_coding | 7/10 | chr18 | TogoVar | ||||||
SMIM21_chr18_75404476_75432703 | 75405525 | T | TGACAGGT others(42): Show |
downstream_gene_variant | MODIFIER | NA18977.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0004 | 1 | 432 | 0.0023 | 49 | c.*53 others(60): Show |
SMIM21 | ENSG00000206026.7 | transcript | ENST00000579022.5 | protein_coding | 3950 | chr18 | TogoVar | ||||||
SMKR1_chr7_129497531_129517918 | 129512549 | A | AGCCACAA others(42): Show |
3_prime_UTR_variant | MODIFIER | HG04115.hp2 | a0000 | a0000c0005 | a0000c0005t0005 | a0000c0005t0005g0067 | 1 | 422 | 0.0024 | 49 | c.*10 others(58): Show |
SMKR1 | ENSG00000240204.3 | transcript | ENST00000462322.3 | protein_coding | 2/2 | 109 | chr7 | TogoVar | |||||
SMOC2_chr6_168436184_168672992 | 168488746 | G | GATCACAC others(42): Show |
intron_variant | MODIFIER | HG00099.hp2 | a0001 | a0001c0001 | a0001c0001t0004 | a0001c0001t0004g0122 | 1 | 180 | 0.0056 | 49 | c.85- others(66): Show |
SMOC2 | ENSG00000112562.20 | transcript | ENST00000356284.7 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |||||
SMPD1_chr11_6385474_6399996 | 6387203 | C | CTGGGCGA others(42): Show |
upstream_gene_variant | MODIFIER | HG01123.hp2 HG02258.hp2 HG03579.hp2 others(4): Show |
a0002a0009 | a0002c0002a0009c0011 | a0002c0002t0001a0009c0011t0001 | a0002c0002t0001g0001a0002c0002t0001g0002a0002c0002t0001g0005others(2): Show | 7 | 388 | 0.0180 | 49 | c.-33 others(60): Show |
SMPD1 | ENSG00000166311.10 | transcript | ENST00000342245.9 | protein_coding | 3270 | chr11 | TogoVar | ||||||
SMUG1_chr12_54175366_54193985 | 54188303 | A | ATAATAAT others(42): Show |
intron_variant | MODIFIER | NA18951.hp1 NA19079.hp2 |
a0001 | a0001c0001 | a0001c0001t0005a0001c0001t0006 | a0001c0001t0005g0071a0001c0001t0006g0070 | 2 | 438 | 0.0046 | 49 | c.-10 others(66): Show |
SMUG1 | ENSG00000123415.16 | transcript | ENST00000682136.1 | protein_coding | 1/3 | chr12 | TogoVar | ||||||
SMURF1_chr7_99022440_99149108 | 99063257 | A | ATATATAA others(42): Show |
intron_variant | MODIFIER | NA21309.hp2 | a0001 | a0001c0001 | a0001c0001t0007 | a0001c0001t0007g0255 | 1 | 264 | 0.0038 | 49 | c.56- others(64): Show |
SMURF1 | ENSG00000198742.10 | transcript | ENST00000361368.7 | protein_coding | 1/17 | chr7 | TogoVar | ||||||
SNAPC4_chr9_136370571_136405170 | 136403374 | G | GGAGAAAG others(42): Show |
upstream_gene_variant | MODIFIER | HG02723.hp1 | a0001 | a0001c0045 | a0001c0045t0001 | a0001c0045t0001g0170 | 1 | 380 | 0.0026 | 49 | c.-32 others(60): Show |
SNAPC4 | ENSG00000165684.6 | transcript | ENST00000684778.1 | protein_coding | 3205 | chr9 | TogoVar | ||||||
SNAPC4_chr9_136370571_136405170 | 136403416 | C | CGGGGGGA others(42): Show |
upstream_gene_variant | MODIFIER | HG02602.hp1 | a0003 | a0003c0003 | a0003c0003t0002 | a0003c0003t0002g0220 | 1 | 380 | 0.0026 | 49 | c.-32 others(60): Show |
SNAPC4 | ENSG00000165684.6 | transcript | ENST00000684778.1 | protein_coding | 3247 | chr9 | TogoVar | ||||||
SNED1_chr2_240993618_241100568 | 241036053 | T | TGCGTCAC others(42): Show |
intron_variant | MODIFIER | NA18974.hp2 | a0005 | a0005c0007 | a0005c0007t0001 | a0005c0007t0001g0110 | 1 | 344 | 0.0029 | 49 | c.806 others(64): Show |
SNED1 | ENSG00000162804.15 | transcript | ENST00000310397.13 | protein_coding | 4/31 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
SNX18_chr5_54512759_54551586 | 54513684 | T | TTATATAT others(42): Show |
upstream_gene_variant | MODIFIER | HG02055.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0001 | 1 | 390 | 0.0026 | 49 | c.-42 others(60): Show |
SNX18 | ENSG00000178996.14 | transcript | ENST00000381410.5 | protein_coding | 4074 | chr5 | TogoVar | ||||||
SNX18_chr5_54512759_54551586 | 54513747 | T | TTATATAA others(42): Show |
upstream_gene_variant | MODIFIER | NA19078.hp1 | a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0063 | 1 | 390 | 0.0026 | 49 | c.-42 others(60): Show |
SNX18 | ENSG00000178996.14 | transcript | ENST00000381410.5 | protein_coding | 4011 | chr5 | TogoVar | ||||||
SNX30_chr9_112745760_112879987 | 112756797 | C | CGGCCGCA others(42): Show |
intron_variant | MODIFIER | NA18972.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0043 | 1 | 338 | 0.0030 | 49 | c.156 others(66): Show |
SNX30 | ENSG00000148158.17 | transcript | ENST00000374232.8 | protein_coding | 1/8 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | |||||
SNX6_chr14_34556093_34635148 | 34557557 | T | TTCTTCTT others(42): Show |
downstream_gene_variant | MODIFIER | HG01070.hp2 HG01071.hp2 HG01081.hp2 |
a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0269a0001c0001t0003g0297a0001c0001t0003g0302 | 3 | 322 | 0.0093 | 49 | c.*55 others(60): Show |
SNX6 | ENSG00000129515.20 | transcript | ENST00000362031.10 | protein_coding | 3535 | chr14 | TogoVar | ||||||
SNX8_chr7_2246770_2319441 | 2268694 | C | CCCGGCCA others(42): Show |
intron_variant | MODIFIER | HG00099.hp1 HG00280.hp2 HG00558.hp2 others(106): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0003a0002c0004others(3): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0005others(21): Show | a0001c0001t0002g0017a0001c0001t0002g0018a0001c0001t0002g0026others(104): Show | 109 | 370 | 0.2946 | 49 | c.621 others(64): Show |
SNX8 | ENSG00000106266.11 | transcript | ENST00000222990.8 | protein_coding | 5/10 | chr7 | TogoVar | ||||||
SNX8_chr7_2246770_2319441 | 2268697 | A | AGCCAGCC others(42): Show |
intron_variant | MODIFIER | HG00544.hp1 HG00639.hp2 HG00642.hp1 others(44): Show |
a0001a0002a0004 | a0001c0001a0001c0016a0002c0004others(1): Show | a0001c0001t0003a0001c0001t0011a0001c0001t0013others(9): Show | a0001c0001t0003g0038a0001c0001t0003g0066a0001c0001t0003g0067others(44): Show | 47 | 370 | 0.1270 | 49 | c.621 others(64): Show |
SNX8 | ENSG00000106266.11 | transcript | ENST00000222990.8 | protein_coding | 5/10 | chr7 | TogoVar |