view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ICA1_chr7_8108184_8267167 | 8152669 | C | CATTATCT others(440): Show |
intron_variant | MODIFIER | HG00673.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0272 | 1 | 274 | 0.0037 | 447 | c.804 others(464): Show |
ICA1 | ENSG00000003147.19 | transcript | ENST00000402384.8 | protein_coding | 8/13 | chr7 | TogoVar | |||||||
IFNAR1_chr21_33319970_33364864 | 33322606 | T | TACATGGA others(440): Show |
upstream_gene_variant | MODIFIER | NA19085.hp1 | a0002 | a0002c0002 | a0002c0002t0002 | a0002c0002t0002g0001 | 1 | 323 | 0.0031 | 447 | c.-24 others(458): Show |
IFNAR1 | ENSG00000142166.15 | transcript | ENST00000270139.8 | protein_coding | 2363 | chr21 | TogoVar | |||||||
INO80_chr15_40973880_41121280 | 41031547 | G | GAAGGGAG others(440): Show |
intron_variant | MODIFIER | HG00544.hp1 NA18983.hp2 |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0128 a0001c0001t0002g0154 |
2 | 282 | 0.0071 | 447 | c.290 others(466): Show |
INO80 | ENSG00000128908.19 | transcript | ENST00000648947.1 | protein_coding | 24/35 | chr15 | TogoVar | |||||||
JMJD1C_chr10_63162225_63470977 | 63234660 | T | TGGTGGTT others(440): Show |
intron_variant | MODIFIER | NA18977.hp2 | a0011 | a0011c0014 | a0011c0014t0001 | a0011c0014t0001g0205 | 1 | 310 | 0.0032 | 447 | c.448 others(466): Show |
JMJD1C | ENSG00000171988.20 | transcript | ENST00000399262.7 | protein_coding | 3/25 | chr10 | TogoVar | |||||||
LMF1_chr16_848634_975984 | 857636 | G | GAGTGGTG others(440): Show |
intron_variant | MODIFIER | NA19009.hp2 | a0001 | a0001c0003 | a0001c0003t0001 | a0001c0003t0001g0180 | 1 | 294 | 0.0034 | 447 | c.153 others(466): Show |
LMF1 | ENSG00000103227.19 | transcript | ENST00000262301.16 | protein_coding | 10/10 | chr16 | TogoVar | |||||||
LMF1_chr16_848634_975984 | 857705 | G | GAGTGGTG others(440): Show |
intron_variant | MODIFIER | NA19002.hp2 | a0001 | a0001c0067 | a0001c0067t0001 | a0001c0067t0001g0056 | 1 | 294 | 0.0034 | 447 | c.153 others(466): Show |
LMF1 | ENSG00000103227.19 | transcript | ENST00000262301.16 | protein_coding | 10/10 | chr16 | TogoVar | |||||||
LMF1_chr16_848634_975984 | 857706 | C | CAGTGGTG others(440): Show |
intron_variant | MODIFIER | HG03486.hp1 | a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0073 | 1 | 294 | 0.0034 | 447 | c.153 others(466): Show |
LMF1 | ENSG00000103227.19 | transcript | ENST00000262301.16 | protein_coding | 10/10 | chr16 | TogoVar | |||||||
LMF1_chr16_848634_975984 | 922943 | T | TGCGTGTT others(440): Show |
intron_variant | MODIFIER | HG00741.hp2 HG01258.hp2 HG01978.hp1 others(3): Show |
a0001 | a0001c0010a0001c0033 | a0001c0010t0001a0001c0033t0001 | a0001c0010t0001g0115 a0001c0010t0001g0271 a0001c0010t0001g0272 others(3): Show |
6 | 294 | 0.0204 | 447 | c.514 others(466): Show |
LMF1 | ENSG00000103227.19 | transcript | ENST00000262301.16 | protein_coding | 3/10 | chr16 | TogoVar | |||||||
LOC128125818_chr4_6059977_6075162 | 6067579 | G | GCACTCAA others(440): Show |
intron_variant | MODIFIER | NA19065.hp2 | a0001 | a0001c0001 | a0001c0001t0000 | a0001c0001t0000g0187 | 1 | 462 | 0.0022 | 447 | c.106 others(464): Show |
LOC128125818 | ENSG00000284684.1 | transcript | ENST00000636216.1 | protein_coding | 1/1 | chr4 | TogoVar | |||||||
MBD3L3_chr19_7051207_7063676 | 7061746 | T | TATAATAT others(440): Show |
upstream_gene_variant | MODIFIER | HG02922.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 | 1 | 288 | 0.0035 | 447 | c.-31 others(458): Show |
MBD3L3 | ENSG00000182315.10 | transcript | ENST00000333843.9 | protein_coding | 3071 | chr19 | TogoVar | |||||||
MYDGF_chr19_4652545_4675342 | 4663531 | C | CACAGCCT others(440): Show |
intron_variant | MODIFIER | HG02622.hp1 | a0002 | a0002c0002 | a0002c0002t0002 | a0002c0002t0002g0109 | 1 | 410 | 0.0024 | 447 | c.287 others(464): Show |
MYDGF | ENSG00000074842.8 | transcript | ENST00000262947.8 | protein_coding | 3/5 | chr19 | TogoVar | |||||||
NFILZ_chr19_8625633_8686151 | 8656420 | C | CTTCTCTC others(440): Show |
intron_variant | MODIFIER | HG01256.hp2 | a0002 | a0002c0002 | a0002c0002t0099 | a0002c0002t0099g0083 | 1 | 366 | 0.0027 | 447 | c.-16 others(468): Show |
NFILZ | ENSG00000268480.4 | transcript | ENST00000691075.1 | protein_coding | 3/5 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | ||||||
NHLRC4_chr16_562005_574495 | 571109 | C | CTGGCTAG others(440): Show |
downstream_gene_variant | MODIFIER | HG00673.hp2 HG01257.hp1 HG01496.hp1 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 | 9 | 424 | 0.0212 | 447 | c.*26 others(458): Show |
NHLRC4 | ENSG00000257108.2 | transcript | ENST00000424439.3 | protein_coding | 1615 | chr16 | TogoVar | |||||||
NHLRC4_chr16_562005_574495 | 571109 | C | CTGGCTAG others(440): Show |
downstream_gene_variant | MODIFIER | HG02717.hp1 HG02976.hp1 NA19079.hp2 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0006 | a0001c0001t0001g0001 a0001c0001t0006g0003 |
3 | 424 | 0.0071 | 447 | c.*26 others(458): Show |
NHLRC4 | ENSG00000257108.2 | transcript | ENST00000424439.3 | protein_coding | 1615 | chr16 | TogoVar | |||||||
NINL_chr20_25447697_25590531 | 25562188 | G | GCCCGGCC others(440): Show |
intron_variant | MODIFIER | HG03491.hp1 | a0002 | a0002c0002 | a0002c0002t0002 | a0002c0002t0002g0097 | 1 | 310 | 0.0032 | 447 | c.-12 others(466): Show |
NINL | ENSG00000101004.16 | transcript | ENST00000278886.11 | protein_coding | 1/23 | chr20 | TogoVar | |||||||
NINL_chr20_25447697_25590531 | 25562188 | G | GCCCGGCC others(440): Show |
intron_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00280.hp1 others(59): Show |
a0002a0012a0016others(2): Show | a0002c0002a0002c0023a0002c0027others(4): Show | a0002c0002t0002a0002c0002t0005a0002c0002t0008others(6): Show | a0002c0002t0002g0001 a0002c0002t0002g0002 a0002c0002t0002g0006 others(59): Show |
62 | 310 | 0.2000 | 447 | c.-12 others(466): Show |
NINL | ENSG00000101004.16 | transcript | ENST00000278886.11 | protein_coding | 1/23 | chr20 | TogoVar | |||||||
NINL_chr20_25447697_25590531 | 25562188 | G | GCCCGGCC others(440): Show |
intron_variant | MODIFIER | HG01123.hp1 | a0002 | a0002c0002 | a0002c0002t0005 | a0002c0002t0005g0071 | 1 | 310 | 0.0032 | 447 | c.-12 others(466): Show |
NINL | ENSG00000101004.16 | transcript | ENST00000278886.11 | protein_coding | 1/23 | chr20 | TogoVar | |||||||
NME4_chr16_392199_405754 | 397707 | T | TGTGGGGG others(440): Show |
intron_variant | MODIFIER | HG01981.hp2 | a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0263 | 1 | 356 | 0.0028 | 447 | c.91+ others(460): Show |
NME4 | ENSG00000103202.13 | transcript | ENST00000219479.7 | protein_coding | 1/4 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
NRDE2_chr14_90262860_90336941 | 90300885 | G | GGGGAGGG others(440): Show |
intron_variant | MODIFIER | HG03927.hp1 NA19076.hp2 |
a0002 | a0002c0002 | a0002c0002t0019a0002c0002t0047 | a0002c0002t0019g0030 a0002c0002t0047g0084 |
2 | 344 | 0.0058 | 447 | c.154 others(464): Show |
NRDE2 | ENSG00000119720.18 | transcript | ENST00000354366.8 | protein_coding | 7/13 | chr14 | TogoVar | |||||||
NXN_chr17_794310_984776 | 952751 | G | GGGGGGGC others(440): Show |
intron_variant | MODIFIER | HG02622.hp1 | a0001 | a0001c0001 | a0001c0001t0007 | a0001c0001t0007g0023 | 1 | 242 | 0.0041 | 447 | c.360 others(466): Show |
NXN | ENSG00000167693.17 | transcript | ENST00000336868.8 | protein_coding | 1/7 | chr17 | TogoVar | |||||||
ODF3_chr11_191761_205258 | 196141 | A | AGGGGGGC others(440): Show |
upstream_gene_variant | MODIFIER | HG01192.hp2 HG01891.hp1 HG02572.hp2 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0005 | 7 | 388 | 0.0180 | 447 | c.-91 others(456): Show |
ODF3 | ENSG00000177947.15 | transcript | ENST00000325113.9 | protein_coding | 619 | chr11 | TogoVar | |||||||
PALLD_chr4_168492052_168933441 | 168738636 | G | GGCCAGGC others(440): Show |
intron_variant | MODIFIER | HG03225.hp1 | a0001 | a0001c0001 | a0001c0001t0020 | a0001c0001t0020g0098 | 1 | 156 | 0.0064 | 447 | c.196 others(468): Show |
PALLD | ENSG00000129116.20 | transcript | ENST00000505667.6 | protein_coding | 10/21 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
PALLD_chr4_168492052_168933441 | 168738636 | G | GGCCAGGC others(440): Show |
intron_variant | MODIFIER | HG01074.hp1 HG01099.hp2 HG01346.hp1 others(12): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0002a0002c0003others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0008others(9): Show | a0001c0001t0001g0068 a0001c0001t0002g0089 a0001c0001t0002g0104 others(12): Show |
15 | 156 | 0.0962 | 447 | c.196 others(468): Show |
PALLD | ENSG00000129116.20 | transcript | ENST00000505667.6 | protein_coding | 10/21 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
PALLD_chr4_168492052_168933441 | 168738666 | G | GGTGATCC others(440): Show |
intron_variant | MODIFIER | HG01167.hp2 HG02602.hp2 HG03225.hp2 |
a0001a0002a0006 | a0001c0001a0002c0003a0006c0020 | a0001c0001t0003a0002c0003t0001a0006c0020t0001 | a0001c0001t0003g0016 a0002c0003t0001g0036 a0006c0020t0001g0024 |
3 | 156 | 0.0192 | 447 | c.196 others(468): Show |
PALLD | ENSG00000129116.20 | transcript | ENST00000505667.6 | protein_coding | 10/21 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
PALLD_chr4_168492052_168933441 | 168738666 | G | GGTGATCC others(440): Show |
intron_variant | MODIFIER | HG02523.hp1 | a0002 | a0002c0003 | a0002c0003t0002 | a0002c0003t0002g0142 | 1 | 156 | 0.0064 | 447 | c.196 others(468): Show |
PALLD | ENSG00000129116.20 | transcript | ENST00000505667.6 | protein_coding | 10/21 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
PAM16_chr16_4335251_4356321 | 4344665 | A | AGGGGATT others(440): Show |
intron_variant | MODIFIER | NA21309.hp1 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0189 | 1 | 367 | 0.0027 | 447 | c.4-1 others(460): Show |
PAM16 | ENSG00000217930.8 | transcript | ENST00000318059.8 | protein_coding | 1/4 | chr16 | TogoVar | |||||||
PAX1_chr20_21700664_21723481 | 21721646 | T | TATGTATT others(440): Show |
downstream_gene_variant | MODIFIER | HG00438.hp1 | a0001 | a0001c0001 | a0001c0001t0006 | a0001c0001t0006g0001 | 1 | 400 | 0.0025 | 447 | c.*70 others(458): Show |
PAX1 | ENSG00000125813.15 | transcript | ENST00000613128.5 | protein_coding | 3166 | chr20 | TogoVar | |||||||
PAX1_chr20_21700664_21723481 | 21721646 | T | TATGTATT others(440): Show |
downstream_gene_variant | MODIFIER | HG02155.hp1 NA18954.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 a0001c0001t0001g0005 |
2 | 400 | 0.0050 | 447 | c.*70 others(458): Show |
PAX1 | ENSG00000125813.15 | transcript | ENST00000613128.5 | protein_coding | 3166 | chr20 | TogoVar | |||||||
PAX1_chr20_21700664_21723481 | 21721646 | T | TATGTATT others(440): Show |
downstream_gene_variant | MODIFIER | HG03017.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0005 | 1 | 400 | 0.0025 | 447 | c.*70 others(458): Show |
PAX1 | ENSG00000125813.15 | transcript | ENST00000613128.5 | protein_coding | 3166 | chr20 | TogoVar | |||||||
PAX1_chr20_21700664_21723481 | 21721646 | T | TATGTATT others(440): Show |
downstream_gene_variant | MODIFIER | HG03831.hp2 NA18989.hp2 |
a0001 | a0001c0001 | a0001c0001t0005a0001c0001t0006 | a0001c0001t0005g0003 a0001c0001t0006g0001 |
2 | 400 | 0.0050 | 447 | c.*70 others(458): Show |
PAX1 | ENSG00000125813.15 | transcript | ENST00000613128.5 | protein_coding | 3166 | chr20 | TogoVar | |||||||
PAX1_chr20_21700664_21723481 | 21721649 | G | GTATTACA others(440): Show |
downstream_gene_variant | MODIFIER | HG00738.hp2 | a0001 | a0001c0001 | a0001c0001t0041 | a0001c0001t0041g0002 | 1 | 400 | 0.0025 | 447 | c.*70 others(458): Show |
PAX1 | ENSG00000125813.15 | transcript | ENST00000613128.5 | protein_coding | 3169 | chr20 | TogoVar | |||||||
PAX1_chr20_21700664_21723481 | 21721656 | A | ATATATGT others(440): Show |
downstream_gene_variant | MODIFIER | HG03239.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0012 | 1 | 400 | 0.0025 | 447 | c.*70 others(458): Show |
PAX1 | ENSG00000125813.15 | transcript | ENST00000613128.5 | protein_coding | 3176 | chr20 | TogoVar | |||||||
PAX1_chr20_21700664_21723481 | 21721656 | A | ATATATGT others(440): Show |
downstream_gene_variant | MODIFIER | HG00280.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0017 | 1 | 400 | 0.0025 | 447 | c.*70 others(458): Show |
PAX1 | ENSG00000125813.15 | transcript | ENST00000613128.5 | protein_coding | 3176 | chr20 | TogoVar | |||||||
PCDH11Y_chrY_4995296_5747224 | 5525214 | T | TGGGAGGA others(440): Show |
intron_variant | MODIFIER | HG02486.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0108 | 1 | 115 | 0.0087 | 447 | c.305 others(468): Show |
PCDH11Y | ENSG00000099715.15 | transcript | ENST00000698851.1 | protein_coding | 4/5 | INFO_REALIGN_3_PRIME | chrY | TogoVar | ||||||
PIGQ_chr16_564968_589109 | 571109 | C | CTGGCTAG others(440): Show |
intron_variant | MODIFIER | HG00673.hp1 HG01243.hp1 HG01496.hp1 others(3): Show |
a0002 | a0002c0001a0002c0010 | a0002c0001t0001a0002c0010t0001 | a0002c0001t0001g0092 a0002c0001t0001g0099 a0002c0001t0001g0112 others(3): Show |
6 | 408 | 0.0147 | 447 | c.-10 others(464): Show |
PIGQ | ENSG00000007541.17 | transcript | ENST00000321878.10 | protein_coding | 1/10 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
PIGQ_chr16_564968_589109 | 571109 | C | CTGGCTAG others(440): Show |
intron_variant | MODIFIER | HG02717.hp2 NA18987.hp2 NA19079.hp2 |
a0002 | a0002c0001a0002c0007 | a0002c0001t0005a0002c0007t0001 | a0002c0001t0005g0102 a0002c0001t0005g0116 a0002c0007t0001g0101 |
3 | 408 | 0.0074 | 447 | c.-10 others(464): Show |
PIGQ | ENSG00000007541.17 | transcript | ENST00000321878.10 | protein_coding | 1/10 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
PKNOX2_chr11_125159751_125438389 | 125262894 | T | TCTTTTTT others(440): Show |
intron_variant | MODIFIER | HG02572.hp2 | a0001 | a0001c0001 | a0001c0001t0010 | a0001c0001t0010g0143 | 1 | 222 | 0.0045 | 447 | c.-13 others(468): Show |
PKNOX2 | ENSG00000165495.16 | transcript | ENST00000298282.14 | protein_coding | 2/12 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
PRKCA_chr17_66297613_66815743 | 66799112 | A | ATGGTGGT others(440): Show |
intron_variant | MODIFIER | HG03017.hp2 | a0001 | a0001c0001 | a0001c0001t0027 | a0001c0001t0027g0124 | 1 | 178 | 0.0056 | 447 | c.185 others(466): Show |
PRKCA | ENSG00000154229.12 | transcript | ENST00000413366.8 | protein_coding | 16/16 | chr17 | TogoVar | |||||||
PRKCZ_chr1_2045411_2190395 | 2123797 | G | GTCATGGT others(440): Show |
intron_variant | MODIFIER | HG00438.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0261 | 1 | 286 | 0.0035 | 447 | c.335 others(466): Show |
PRKCZ | ENSG00000067606.17 | transcript | ENST00000378567.8 | protein_coding | 4/17 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
PRPF31_chr19_54110754_54136713 | 54133778 | T | TCTCCACC others(440): Show |
downstream_gene_variant | MODIFIER | HG01071.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0037 | 1 | 227 | 0.0044 | 447 | c.*23 others(458): Show |
PRPF31 | ENSG00000105618.14 | transcript | ENST00000321030.9 | protein_coding | 2066 | chr19 | TogoVar | |||||||
RNF213_chr17_80255852_80403794 | 80274638 | T | TGAGTGGG others(440): Show |
intron_variant | MODIFIER | HG02895.hp2 HG03041.hp2 NA19043.hp1 |
a0005a0014a0090 | a0005c0105a0014c0020a0090c0114 | a0005c0105t0021a0014c0020t0014a0090c0114t0066 | a0005c0105t0021g0270 a0014c0020t0014g0257 a0090c0114t0066g0258 |
3 | 292 | 0.0103 | 447 | c.261 others(464): Show |
RNF213 | ENSG00000173821.20 | transcript | ENST00000582970.6 | protein_coding | 3/67 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
RPH3AL_chr17_207389_357807 | 242419 | C | CTACCTTC others(440): Show |
intron_variant | MODIFIER | NA18995.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0029 | 1 | 133 | 0.0075 | 447 | c.613 others(464): Show |
RPH3AL | ENSG00000181031.16 | transcript | ENST00000331302.12 | protein_coding | 7/9 | chr17 | TogoVar | |||||||
RTEL1_chr20_63653312_63701245 | 63693729 | A | ACCACCAC others(440): Show |
intron_variant | MODIFIER | HG00642.hp1 | a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0056 | 1 | 60 | 0.0167 | 447 | c.299 others(464): Show |
RTEL1 | ENSG00000258366.12 | transcript | ENST00000360203.11 | protein_coding | 30/34 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
RUNDC3B_chr7_87623398_87837296 | 87626684 | T | TTGTCATA others(440): Show |
upstream_gene_variant | MODIFIER | HG02630.hp1 | a0001 | a0001c0001 | a0001c0001t0060 | a0001c0001t0060g0015 | 1 | 202 | 0.0050 | 447 | c.-21 others(458): Show |
RUNDC3B | ENSG00000105784.16 | transcript | ENST00000394654.4 | protein_coding | 1713 | chr7 | TogoVar | |||||||
SCGB1C1_chr11_188078_199575 | 196141 | A | AGGGGGGC others(440): Show |
downstream_gene_variant | MODIFIER | HG01192.hp1 HG01891.hp1 HG02572.hp1 others(4): Show |
a0001 | a0001c0004 | a0001c0004t0001 | a0001c0004t0001g0001 a0001c0004t0001g0006 a0001c0004t0001g0019 |
7 | 354 | 0.0198 | 447 | c.*16 others(458): Show |
SCGB1C1 | ENSG00000188076.3 | transcript | ENST00000342878.3 | protein_coding | 1567 | chr11 | TogoVar | |||||||
SDHA_chr5_213320_262082 | 260234 | C | CCCGGCAG others(440): Show |
downstream_gene_variant | MODIFIER | HG03831.hp2 | a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0141 | 1 | 266 | 0.0038 | 447 | c.*38 others(458): Show |
SDHA | ENSG00000073578.18 | transcript | ENST00000264932.11 | protein_coding | 3153 | chr5 | TogoVar | |||||||
SGSM2_chr17_2332501_2386054 | 2355830 | G | GGTTGGGG others(440): Show |
intron_variant | MODIFIER | HG00099.hp1 HG00558.hp1 HG01099.hp2 others(45): Show |
a0001a0004a0005others(2): Show | a0001c0001a0001c0003a0001c0005others(5): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0009others(10): Show | a0001c0001t0001g0081 a0001c0001t0001g0122 a0001c0001t0001g0332 others(43): Show |
48 | 422 | 0.1137 | 447 | c.134 others(464): Show |
SGSM2 | ENSG00000141258.13 | transcript | ENST00000268989.8 | protein_coding | 2/23 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
SGSM2_chr17_2332501_2386054 | 2355830 | G | GGTTGGGG others(440): Show |
intron_variant | MODIFIER | HG02559.hp2 HG03139.hp2 |
a0002 | a0002c0012 | a0002c0012t0001 | a0002c0012t0001g0129 a0002c0012t0001g0372 |
2 | 422 | 0.0047 | 447 | c.134 others(464): Show |
SGSM2 | ENSG00000141258.13 | transcript | ENST00000268989.8 | protein_coding | 2/23 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
SGSM2_chr17_2332501_2386054 | 2355830 | G | GGTTGGGG others(440): Show |
intron_variant | MODIFIER | HG02602.hp2 | a0001 | a0001c0003 | a0001c0003t0001 | a0001c0003t0001g0294 | 1 | 422 | 0.0024 | 447 | c.134 others(464): Show |
SGSM2 | ENSG00000141258.13 | transcript | ENST00000268989.8 | protein_coding | 2/23 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
SLC66A2_chr18_79897420_79956653 | 79921459 | G | GGAACCGA others(440): Show |
intron_variant | MODIFIER | NA18747.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0045 | 1 | 352 | 0.0028 | 447 | c.392 others(464): Show |
SLC66A2 | ENSG00000122490.19 | transcript | ENST00000397778.7 | protein_coding | 4/5 | chr18 | TogoVar |