regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
CHMP6_chr17_80986841_81005133 | 81004180 | T | TGCCCA | downstream_gene_variant | MODIFIER | HG01891.hp1 HG02976.hp2 HG03486.hp1 |
a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0034a0001c0001t0003g0096 | 3 | 438 | 0.0069 | 5 | c.*50 others(16): Show |
CHMP6 | ENSG00000176108.9 | transcript | ENST00000325167.9 | protein_coding | 4048 | chr17 | TogoVar | ||||||
CHM_chrX_85856180_86052558 | 85856289 | T | TAAAAA | downstream_gene_variant | MODIFIER | HG02970.hp1 HG03453.hp2 |
a0001 | a0001c0001 | a0001c0001t0004a0001c0001t0016 | a0001c0001t0004g0211a0001c0001t0016g0212 | 2 | 245 | 0.0082 | 5 | c.*83 others(16): Show |
CHM | ENSG00000188419.14 | transcript | ENST00000357749.7 | protein_coding | 4890 | chrX | TogoVar | ||||||
CHM_chrX_85856180_86052558 | 85897086 | A | ATATAT | intron_variant | MODIFIER | HG01109.hp1 HG01884.hp1 HG01891.hp2 others(25): Show |
a0001a0002a0005others(1): Show | a0001c0001a0002c0005a0005c0009others(1): Show | a0001c0001t0004a0001c0001t0006a0001c0001t0007others(10): Show | a0001c0001t0004g0211a0001c0001t0004g0218a0001c0001t0004g0233others(25): Show | 28 | 245 | 0.1143 | 5 | c.141 others(24): Show |
CHM | ENSG00000188419.14 | transcript | ENST00000357749.7 | protein_coding | 11/14 | chrX | TogoVar | ||||||
CHM_chrX_85856180_86052558 | 85913313 | C | CAAAAA | intron_variant | MODIFIER | NA18906.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0044 | 1 | 245 | 0.0041 | 5 | c.116 others(24): Show |
CHM | ENSG00000188419.14 | transcript | ENST00000357749.7 | protein_coding | 8/14 | chrX | TogoVar | ||||||
CHM_chrX_85856180_86052558 | 85913332 | A | AAAAAG | intron_variant | MODIFIER | HG00280.hp1 HG01255.hp1 HG02630.hp2 others(3): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0001t0005a0001c0001t0008others(1): Show | a0001c0001t0001g0129a0001c0001t0001g0231a0001c0001t0001g0239others(3): Show | 6 | 245 | 0.0245 | 5 | c.116 others(24): Show |
CHM | ENSG00000188419.14 | transcript | ENST00000357749.7 | protein_coding | 8/14 | chrX | TogoVar | ||||||
CHM_chrX_85856180_86052558 | 85913332 | A | AGAAAG | intron_variant | MODIFIER | HG01993.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0242 | 1 | 245 | 0.0041 | 5 | c.116 others(24): Show |
CHM | ENSG00000188419.14 | transcript | ENST00000357749.7 | protein_coding | 8/14 | chrX | TogoVar | ||||||
CHM_chrX_85856180_86052558 | 85950336 | T | TGAATA | intron_variant | MODIFIER | HG00323.hp2 HG00597.hp1 HG00735.hp2 others(43): Show |
a0001a0008 | a0001c0001a0001c0002a0008c0011 | a0001c0001t0001a0001c0001t0004a0001c0001t0006others(5): Show | a0001c0001t0001g0213a0001c0001t0001g0214a0001c0001t0001g0215others(43): Show | 46 | 245 | 0.1878 | 5 | c.116 others(24): Show |
CHM | ENSG00000188419.14 | transcript | ENST00000357749.7 | protein_coding | 8/14 | chrX | TogoVar | ||||||
CHM_chrX_85856180_86052558 | 85973300 | C | CAAAAA | intron_variant | MODIFIER | HG00639.hp1 HG01257.hp2 HG01258.hp1 others(13): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0001t0004a0001c0001t0007others(2): Show | a0001c0001t0001g0040a0001c0001t0001g0091a0001c0001t0001g0094others(13): Show | 16 | 245 | 0.0653 | 5 | c.314 others(22): Show |
CHM | ENSG00000188419.14 | transcript | ENST00000357749.7 | protein_coding | 4/14 | chrX | TogoVar | ||||||
CHM_chrX_85856180_86052558 | 86026097 | A | ATTTTT | intron_variant | MODIFIER | HG04228.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0004 | 1 | 245 | 0.0041 | 5 | c.116 others(22): Show |
CHM | ENSG00000188419.14 | transcript | ENST00000357749.7 | protein_coding | 2/14 | chrX | TogoVar | ||||||
CHM_chrX_85856180_86052558 | 86026102 | C | CTTTTT | intron_variant | MODIFIER | HG03492.hp1 HG03688.hp1 HG03831.hp1 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0011a0001c0001t0001g0016a0001c0001t0001g0017others(4): Show | 7 | 245 | 0.0286 | 5 | c.116 others(22): Show |
CHM | ENSG00000188419.14 | transcript | ENST00000357749.7 | protein_coding | 2/14 | chrX | TogoVar | ||||||
CHM_chrX_85856180_86052558 | 86027275 | C | CAAAGG | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(167): Show |
a0001a0002a0003others(4): Show | a0001c0001a0001c0003a0001c0008others(6): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(23): Show | a0001c0001t0001g0044a0001c0001t0001g0081a0001c0001t0001g0082others(167): Show | 170 | 245 | 0.6939 | 5 | c.116 others(20): Show |
CHM | ENSG00000188419.14 | transcript | ENST00000357749.7 | protein_coding | 2/14 | chrX | TogoVar | ||||||
CHN1_chr2_174793809_175010381 | 174940016 | C | CTTTTA | intron_variant | MODIFIER | HG02559.hp2 HG03471.hp1 HG03516.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0257a0001c0001t0001g0258a0001c0001t0001g0259 | 3 | 276 | 0.0109 | 5 | c.114 others(22): Show |
CHN1 | ENSG00000128656.15 | transcript | ENST00000409900.9 | protein_coding | 3/12 | chr2 | TogoVar | ||||||
CHN1_chr2_174793809_175010381 | 174979880 | A | AAAAAC | intron_variant | MODIFIER | HG02559.hp2 HG03471.hp1 HG03516.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0257a0001c0001t0001g0258a0001c0001t0001g0259 | 3 | 276 | 0.0109 | 5 | c.19+ others(22): Show |
CHN1 | ENSG00000128656.15 | transcript | ENST00000409900.9 | protein_coding | 1/12 | chr2 | TogoVar | ||||||
CHN2_chr7_29189775_29519328 | 29280383 | C | CAATAA | intron_variant | MODIFIER | HG00280.hp1 HG00558.hp1 HG00558.hp2 others(43): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0005others(2): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(18): Show | a0001c0001t0001g0012a0001c0001t0001g0187a0001c0001t0001g0224others(43): Show | 46 | 232 | 0.1983 | 5 | c.50- others(22): Show |
CHN2 | ENSG00000106069.26 | transcript | ENST00000222792.11 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHN2_chr7_29189775_29519328 | 29351107 | C | CAAAAA | intron_variant | MODIFIER | HG00140.hp1 HG00323.hp2 HG00673.hp2 others(15): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(6): Show | a0001c0001t0001g0005a0001c0001t0001g0009a0001c0001t0001g0025others(15): Show | 18 | 232 | 0.0776 | 5 | c.50- others(20): Show |
CHN2 | ENSG00000106069.26 | transcript | ENST00000222792.11 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHN2_chr7_29189775_29519328 | 29473470 | G | GTTTTT | intron_variant | MODIFIER | HG00609.hp1 HG00639.hp1 HG00673.hp2 others(17): Show |
a0001 | a0001c0001a0001c0002a0001c0005 | a0001c0001t0001a0001c0001t0003a0001c0001t0007others(5): Show | a0001c0001t0001g0026a0001c0001t0001g0034a0001c0001t0001g0130others(17): Show | 20 | 232 | 0.0862 | 5 | c.577 others(22): Show |
CHN2 | ENSG00000106069.26 | transcript | ENST00000222792.11 | protein_coding | 6/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHN2_chr7_29189775_29519328 | 29473482 | T | TTTTTG | intron_variant | MODIFIER | HG01069.hp1 HG01069.hp2 HG01071.hp1 others(19): Show |
a0001a0003 | a0001c0001a0001c0002a0001c0005others(1): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(6): Show | a0001c0001t0001g0136a0001c0001t0001g0140a0001c0001t0001g0141others(19): Show | 22 | 232 | 0.0948 | 5 | c.577 others(22): Show |
CHN2 | ENSG00000106069.26 | transcript | ENST00000222792.11 | protein_coding | 6/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHN2_chr7_29189775_29519328 | 29499602 | C | CAATTA | intron_variant | MODIFIER | HG01891.hp2 HG02055.hp1 HG02818.hp1 others(6): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0006others(3): Show | a0001c0001t0001a0001c0002t0001a0001c0002t0002others(5): Show | a0001c0001t0001g0160a0001c0002t0001g0085a0001c0002t0002g0165others(6): Show | 9 | 232 | 0.0388 | 5 | c.740 others(20): Show |
CHN2 | ENSG00000106069.26 | transcript | ENST00000222792.11 | protein_coding | 8/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHORDC1_chr11_90195429_90228049 | 90200205 | G | GTTGTA | downstream_gene_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00140.hp2 others(252): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(10): Show | a0001c0001t0001g0004a0001c0001t0001g0011a0001c0001t0001g0021others(124): Show | 255 | 412 | 0.6189 | 5 | c.*21 others(16): Show |
CHORDC1 | ENSG00000110172.12 | transcript | ENST00000320585.11 | protein_coding | 223 | chr11 | TogoVar | ||||||
CHORDC1_chr11_90195429_90228049 | 90207761 | C | CAAAAA | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00323.hp2 others(54): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0003a0001c0001t0005others(1): Show | a0001c0001t0002g0017a0001c0001t0002g0103a0001c0001t0002g0104others(28): Show | 57 | 412 | 0.1384 | 5 | c.493 others(22): Show |
CHORDC1 | ENSG00000110172.12 | transcript | ENST00000320585.11 | protein_coding | 6/10 | chr11 | TogoVar | ||||||
CHP1_chr15_41226268_41286887 | 41277791 | G | GAAAAA | intron_variant | MODIFIER | HG01109.hp2 HG02615.hp1 HG02895.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0012a0001c0001t0034 | a0001c0001t0001g0025a0001c0001t0001g0290a0001c0001t0012g0163others(3): Show | 6 | 298 | 0.0201 | 5 | c.412 others(20): Show |
CHP1 | ENSG00000187446.12 | transcript | ENST00000334660.10 | protein_coding | 5/6 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
CHPT1_chr12_101692640_101734074 | 101692668 | T | TAATTC | upstream_gene_variant | MODIFIER | HG00099.hp2 HG00140.hp1 HG00323.hp2 others(168): Show |
a0001a0002a0004 | a0001c0001a0001c0003a0002c0002others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0003t0001others(4): Show | a0001c0001t0001g0011a0001c0001t0001g0032a0001c0001t0001g0033others(101): Show | 171 | 402 | 0.4254 | 5 | c.-51 others(16): Show |
CHPT1 | ENSG00000111666.11 | transcript | ENST00000229266.8 | protein_coding | 4971 | chr12 | TogoVar | ||||||
CHRDL1_chrX_110668856_110800817 | 110674457 | C | CACACA | 3_prime_UTR_variant | MODIFIER | NA19063.hp1 | a0001 | a0001c0001 | a0001c0001t0034 | a0001c0001t0034g0096 | 1 | 172 | 0.0058 | 5 | c.*17 others(16): Show |
CHRDL1 | ENSG00000101938.15 | transcript | ENST00000372042.6 | protein_coding | 12/12 | 1773 | chrX | TogoVar | |||||
CHRDL1_chrX_110668856_110800817 | 110685886 | A | ATTTTT | intron_variant | MODIFIER | HG01243.hp1 HG02572.hp1 NA20300.hp2 |
a0001 | a0001c0002a0001c0006 | a0001c0002t0022a0001c0002t0023a0001c0006t0008 | a0001c0002t0022g0028a0001c0002t0023g0013a0001c0006t0008g0006 | 3 | 172 | 0.0174 | 5 | c.988 others(22): Show |
CHRDL1 | ENSG00000101938.15 | transcript | ENST00000372042.6 | protein_coding | 9/11 | chrX | TogoVar | ||||||
CHRDL1_chrX_110668856_110800817 | 110689656 | C | CTATAT | intron_variant | MODIFIER | HG02738.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0097 | 1 | 172 | 0.0058 | 5 | c.779 others(20): Show |
CHRDL1 | ENSG00000101938.15 | transcript | ENST00000372042.6 | protein_coding | 8/11 | chrX | TogoVar | ||||||
CHRDL1_chrX_110668856_110800817 | 110767598 | C | CAATAA | intron_variant | MODIFIER | HG02630.hp1 HG02895.hp1 HG02897.hp2 others(4): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0036a0001c0001t0046a0001c0002t0003others(1): Show | a0001c0001t0036g0003a0001c0001t0046g0170a0001c0002t0003g0035others(4): Show | 7 | 172 | 0.0407 | 5 | c.95- others(20): Show |
CHRDL1 | ENSG00000101938.15 | transcript | ENST00000372042.6 | protein_coding | 2/11 | chrX | TogoVar | ||||||
CHRDL1_chrX_110668856_110800817 | 110771144 | C | CAAAAA | intron_variant | MODIFIER | HG02258.hp1 HG02922.hp1 HG03486.hp2 |
a0001 | a0001c0002 | a0001c0002t0003a0001c0002t0006a0001c0002t0007 | a0001c0002t0003g0022a0001c0002t0006g0021a0001c0002t0007g0023 | 3 | 172 | 0.0174 | 5 | c.95- others(20): Show |
CHRDL1 | ENSG00000101938.15 | transcript | ENST00000372042.6 | protein_coding | 2/11 | chrX | TogoVar | ||||||
CHRDL2_chr11_74691429_74736426 | 74717112 | A | ACAAAC | intron_variant | MODIFIER | HG01433.hp1 NA18980.hp1 NA19000.hp2 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0196a0001c0001t0002g0293a0001c0001t0002g0304 | 3 | 392 | 0.0077 | 5 | c.195 others(22): Show |
CHRDL2 | ENSG00000054938.17 | transcript | ENST00000376332.8 | protein_coding | 2/10 | chr11 | TogoVar | ||||||
CHRD_chr3_184375054_184394829 | 184390191 | T | TCCCTC | downstream_gene_variant | MODIFIER | HG00639.hp2 HG00735.hp2 HG01069.hp1 others(18): Show |
a0001a0002a0004others(1): Show | a0001c0001a0002c0010a0002c0012others(2): Show | a0001c0001t0001a0002c0010t0001a0002c0012t0001others(2): Show | a0001c0001t0001g0006a0001c0001t0001g0015a0001c0001t0001g0109others(10): Show | 21 | 428 | 0.0491 | 5 | c.*76 others(14): Show |
CHRD | ENSG00000090539.16 | transcript | ENST00000204604.6 | protein_coding | 363 | chr3 | TogoVar | ||||||
CHRD_chr3_184375054_184394829 | 184393700 | A | AAAAAC | downstream_gene_variant | MODIFIER | HG01496.hp2 HG02109.hp1 HG02258.hp2 others(13): Show |
a0002a0003a0013 | a0002c0009a0003c0005a0013c0035 | a0002c0009t0001a0003c0005t0001a0013c0035t0001 | a0002c0009t0001g0024a0002c0009t0001g0150a0003c0005t0001g0033others(6): Show | 16 | 428 | 0.0374 | 5 | c.*42 others(16): Show |
CHRD | ENSG00000090539.16 | transcript | ENST00000204604.6 | protein_coding | 3872 | chr3 | TogoVar | ||||||
CHRFAM7A_chr15_30355566_30398540 | 30364222 | C | CATCTT | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(120): Show |
a0001a0002a0003others(5): Show | a0001c0001a0001c0007a0001c0018others(23): Show | a0001c0001t0001a0001c0001t0004a0001c0001t0011others(42): Show | a0001c0001t0001g0003a0001c0001t0001g0045a0001c0001t0001g0048others(117): Show | 123 | 133 | 0.9248 | 5 | c.721 others(22): Show |
CHRFAM7A | ENSG00000166664.15 | transcript | ENST00000299847.7 | protein_coding | 9/9 | chr15 | TogoVar | ||||||
CHRFAM7A_chr15_30355566_30398540 | 30365801 | C | CTTTTT | intron_variant | MODIFIER | HG00609.hp1 HG01256.hp1 HG01258.hp1 others(3): Show |
a0004 | a0004c0004 | a0004c0004t0003 | a0004c0004t0003g0002a0004c0004t0003g0030a0004c0004t0003g0031others(2): Show | 6 | 133 | 0.0451 | 5 | c.720 others(22): Show |
CHRFAM7A | ENSG00000166664.15 | transcript | ENST00000299847.7 | protein_coding | 9/9 | chr15 | TogoVar | ||||||
CHRM2_chr7_136863652_137025213 | 136867861 | T | TTCTGG | upstream_gene_variant | MODIFIER | HG01069.hp1 HG01071.hp2 HG01123.hp1 others(27): Show |
a0001 | a0001c0001a0001c0010 | a0001c0001t0002a0001c0001t0004a0001c0001t0007others(9): Show | a0001c0001t0002g0092a0001c0001t0004g0075a0001c0001t0004g0076others(27): Show | 30 | 320 | 0.0938 | 5 | c.-14 others(16): Show |
CHRM2 | ENSG00000181072.12 | transcript | ENST00000680005.1 | protein_coding | 790 | chr7 | TogoVar | ||||||
CHRM3_chr1_239381568_239920450 | 239408521 | C | CAAAAA | intron_variant | MODIFIER | HG02083.hp2 HG02735.hp2 HG03927.hp1 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0023a0001c0001t0028others(2): Show | a0001c0001t0001g0009a0001c0001t0023g0007a0001c0001t0028g0017others(2): Show | 5 | 116 | 0.0431 | 5 | c.-52 others(26): Show |
CHRM3 | ENSG00000133019.12 | transcript | ENST00000676153.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
CHRM3_chr1_239381568_239920450 | 239411720 | C | CAAAAA | intron_variant | MODIFIER | HG01261.hp1 HG01346.hp2 HG03239.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0008others(1): Show | a0001c0001t0001g0052a0001c0001t0003g0047a0001c0001t0008g0072others(1): Show | 4 | 116 | 0.0345 | 5 | c.-52 others(26): Show |
CHRM3 | ENSG00000133019.12 | transcript | ENST00000676153.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
CHRM3_chr1_239381568_239920450 | 239519741 | C | CTTTTT | intron_variant | MODIFIER | HG01981.hp2 HG02735.hp2 HG03195.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0015a0001c0001t0018a0001c0001t0038others(1): Show | a0001c0001t0015g0033a0001c0001t0018g0022a0001c0001t0038g0032others(1): Show | 4 | 116 | 0.0345 | 5 | c.-42 others(26): Show |
CHRM3 | ENSG00000133019.12 | transcript | ENST00000676153.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
CHRM3_chr1_239381568_239920450 | 239597858 | G | GTTTTT | intron_variant | MODIFIER | HG02615.hp2 HG02738.hp1 HG02818.hp1 others(5): Show |
a0001a0004 | a0001c0001a0004c0003 | a0001c0001t0001a0001c0001t0004a0001c0001t0009others(5): Show | a0001c0001t0001g0098a0001c0001t0004g0035a0001c0001t0009g0045others(5): Show | 8 | 116 | 0.0690 | 5 | c.-31 others(26): Show |
CHRM3 | ENSG00000133019.12 | transcript | ENST00000676153.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
CHRM3_chr1_239381568_239920450 | 239690063 | A | AGAGAG | intron_variant | MODIFIER | HG00140.hp1 HG00438.hp2 HG00609.hp1 others(73): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0005a0002c0002others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(44): Show | a0001c0001t0001g0002a0001c0001t0001g0009a0001c0001t0001g0054others(73): Show | 76 | 116 | 0.6552 | 5 | c.-14 others(26): Show |
CHRM3 | ENSG00000133019.12 | transcript | ENST00000676153.1 | protein_coding | 5/6 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
CHRM3_chr1_239381568_239920450 | 239881282 | C | CAAAAA | intron_variant | MODIFIER | HG00140.hp2 HG00438.hp1 HG00639.hp2 others(20): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(12): Show | a0001c0001t0001g0009a0001c0001t0001g0010a0001c0001t0001g0052others(20): Show | 23 | 116 | 0.1983 | 5 | c.-19 others(24): Show |
CHRM3 | ENSG00000133019.12 | transcript | ENST00000676153.1 | protein_coding | 6/6 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
CHRM5_chr15_33963497_34072458 | 33966655 | A | AAGATG | upstream_gene_variant | MODIFIER | HG00140.hp1 HG00544.hp2 HG01070.hp2 others(90): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0002a0001c0009others(4): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0006others(21): Show | a0001c0001t0001g0286a0001c0001t0003g0007a0001c0001t0003g0008others(90): Show | 93 | 338 | 0.2752 | 5 | c.-29 others(16): Show |
CHRM5 | ENSG00000184984.10 | transcript | ENST00000383263.7 | protein_coding | 1841 | chr15 | TogoVar | ||||||
CHRM5_chr15_33963497_34072458 | 33966664 | T | TGAGAC | upstream_gene_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp2 others(239): Show |
a0001a0002a0005others(1): Show | a0001c0001a0001c0002a0001c0006others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(23): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0067others(235): Show | 242 | 338 | 0.7160 | 5 | c.-28 others(16): Show |
CHRM5 | ENSG00000184984.10 | transcript | ENST00000383263.7 | protein_coding | 1832 | chr15 | TogoVar | ||||||
CHRM5_chr15_33963497_34072458 | 33968099 | T | TAAAAA | upstream_gene_variant | MODIFIER | HG00323.hp2 HG00738.hp1 HG01070.hp1 others(22): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(5): Show | a0001c0001t0001g0067a0001c0001t0001g0069a0001c0001t0001g0071others(22): Show | 25 | 338 | 0.0740 | 5 | c.-14 others(16): Show |
CHRM5 | ENSG00000184984.10 | transcript | ENST00000383263.7 | protein_coding | 397 | chr15 | TogoVar | ||||||
CHRM5_chr15_33963497_34072458 | 34001715 | C | CAAGCT | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(322): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0002a0001c0006others(5): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(39): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0067others(318): Show | 325 | 338 | 0.9615 | 5 | c.-40 others(26): Show |
CHRM5 | ENSG00000184984.10 | transcript | ENST00000383263.7 | protein_coding | 1/2 | chr15 | TogoVar | ||||||
CHRM5_chr15_33963497_34072458 | 34017484 | G | GTTTTT | intron_variant | MODIFIER | HG02027.hp2 HG02145.hp2 HG02572.hp1 others(4): Show |
a0001a0002 | a0001c0001a0002c0010 | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(3): Show | a0001c0001t0001g0262a0001c0001t0003g0294a0001c0001t0003g0296others(4): Show | 7 | 338 | 0.0207 | 5 | c.-40 others(26): Show |
CHRM5 | ENSG00000184984.10 | transcript | ENST00000383263.7 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
CHRM5_chr15_33963497_34072458 | 34031168 | A | ATTTTT | intron_variant | MODIFIER | HG01978.hp2 HG02129.hp2 HG02970.hp1 others(6): Show |
a0001a0007 | a0001c0001a0001c0002a0007c0011 | a0001c0001t0001a0001c0001t0004a0001c0001t0010others(3): Show | a0001c0001t0001g0081a0001c0001t0001g0127a0001c0001t0001g0167others(6): Show | 9 | 338 | 0.0266 | 5 | c.-40 others(26): Show |
CHRM5 | ENSG00000184984.10 | transcript | ENST00000383263.7 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
CHRM5_chr15_33963497_34072458 | 34053319 | A | ATATAT | intron_variant | MODIFIER | HG00408.hp2 HG02451.hp1 HG02886.hp1 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0013a0001c0001t0031 | a0001c0001t0002g0092a0001c0001t0002g0145a0001c0001t0002g0232others(6): Show | 9 | 338 | 0.0266 | 5 | c.-76 others(22): Show |
CHRM5 | ENSG00000184984.10 | transcript | ENST00000383263.7 | protein_coding | 2/2 | chr15 | TogoVar | ||||||
CHRNA10_chr11_3660587_3676384 | 3661490 | C | CTTTTT | downstream_gene_variant | MODIFIER | HG00735.hp2 HG04184.hp2 NA18944.hp2 others(3): Show |
a0001 | a0001c0001a0001c0008 | a0001c0001t0001a0001c0008t0001 | a0001c0001t0001g0002a0001c0001t0001g0004a0001c0001t0001g0005others(1): Show | 6 | 450 | 0.0133 | 5 | c.*46 others(16): Show |
CHRNA10 | ENSG00000129749.3 | transcript | ENST00000250699.2 | protein_coding | 4096 | chr11 | TogoVar | ||||||
CHRNA10_chr11_3660587_3676384 | 3663033 | A | ATCATC | downstream_gene_variant | MODIFIER | HG00438.hp1 HG00621.hp2 HG00642.hp2 others(24): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0003others(5): Show | 27 | 450 | 0.0600 | 5 | c.*30 others(16): Show |
CHRNA10 | ENSG00000129749.3 | transcript | ENST00000250699.2 | protein_coding | 2553 | chr11 | TogoVar | ||||||
CHRNA10_chr11_3660587_3676384 | 3663089 | A | ATCATC | downstream_gene_variant | MODIFIER | HG00099.hp2 HG00140.hp2 HG00423.hp1 others(116): Show |
a0001a0008a0009 | a0001c0001a0001c0009a0001c0020others(2): Show | a0001c0001t0001a0001c0009t0001a0001c0020t0001others(2): Show | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0003others(17): Show | 119 | 450 | 0.2644 | 5 | c.*30 others(16): Show |
CHRNA10 | ENSG00000129749.3 | transcript | ENST00000250699.2 | protein_coding | 2497 | chr11 | TogoVar | ||||||
CHRNA3_chr15_78590309_78625996 | 78616367 | C | CCGCCA | intron_variant | MODIFIER | HG00544.hp2 HG00558.hp1 HG02056.hp2 others(28): Show |
a0001a0008 | a0001c0003a0008c0018 | a0001c0003t0003a0001c0003t0023a0001c0003t0025others(1): Show | a0001c0003t0003g0052a0001c0003t0003g0243a0001c0003t0003g0244others(27): Show | 31 | 410 | 0.0756 | 5 | c.377 others(20): Show |
CHRNA3 | ENSG00000080644.16 | transcript | ENST00000326828.6 | protein_coding | 4/5 | chr15 | TogoVar |