view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
RYR2_chr1_237037184_237838988 | 237534195 | T | TAAAAC | intron_variant | MODIFIER | HG01243.hp2 HG03098.hp1 |
a0001 | a0001c0002a0001c0011 | a0001c0002t0001a0001c0011t0044 | a0001c0002t0001g0070 a0001c0011t0044g0054 |
2 | 100 | 0.0200 | 5 | c.290 others(24): Show |
RYR2 | ENSG00000198626.18 | transcript | ENST00000366574.7 | protein_coding | 25/104 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
RYR2_chr1_237037184_237838988 | 237594897 | T | TGTTTG | intron_variant | MODIFIER | NA20300.hp2 NA21309.hp2 |
a0001a0002 | a0001c0011a0002c0031 | a0001c0011t0004a0002c0031t0025 | a0001c0011t0004g0064 a0002c0031t0025g0056 |
2 | 100 | 0.0200 | 5 | c.443 others(22): Show |
RYR2 | ENSG00000198626.18 | transcript | ENST00000366574.7 | protein_coding | 33/104 | chr1 | TogoVar | |||||||
RYR2_chr1_237037184_237838988 | 237620364 | T | TAAATC | intron_variant | MODIFIER | HG00280.hp1 HG00280.hp2 HG00408.hp1 others(72): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0002a0001c0003others(37): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0006others(65): Show | a0001c0001t0001g0012 a0001c0001t0001g0099 a0001c0001t0003g0089 others(72): Show |
75 | 100 | 0.7500 | 5 | c.591 others(24): Show |
RYR2 | ENSG00000198626.18 | transcript | ENST00000366574.7 | protein_coding | 38/104 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
RYR2_chr1_237037184_237838988 | 237801541 | C | CAAAAA | intron_variant | MODIFIER | HG03453.hp2 HG03516.hp2 HG03669.hp1 others(1): Show |
a0001 | a0001c0002a0001c0004a0001c0016others(1): Show | a0001c0002t0013a0001c0004t0002a0001c0016t0033others(1): Show | a0001c0002t0013g0017 a0001c0004t0002g0092 a0001c0016t0033g0024 others(1): Show |
4 | 100 | 0.0400 | 5 | c.140 others(24): Show |
RYR2 | ENSG00000198626.18 | transcript | ENST00000366574.7 | protein_coding | 97/104 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
RYR3_chr15_33305967_33871102 | 33336546 | G | GAAAGA | intron_variant | MODIFIER | HG01891.hp2 HG02071.hp2 HG02155.hp1 others(2): Show |
a0001a0002a0004others(1): Show | a0001c0002a0001c0003a0002c0051others(2): Show | a0001c0002t0001a0001c0003t0001a0002c0051t0007others(2): Show | a0001c0002t0001g0018 a0001c0003t0001g0032 a0002c0051t0007g0136 others(2): Show |
5 | 154 | 0.0325 | 5 | c.51+ others(22): Show |
RYR3 | ENSG00000198838.15 | transcript | ENST00000634891.2 | protein_coding | 1/103 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
RYR3_chr15_33305967_33871102 | 33337056 | C | CAAAAA | intron_variant | MODIFIER | HG01106.hp1 HG02559.hp1 HG03579.hp2 others(3): Show |
a0001a0007a0013others(3): Show | a0001c0001a0007c0072a0013c0124others(3): Show | a0001c0001t0005a0007c0072t0004a0013c0124t0003others(3): Show | a0001c0001t0005g0008 a0007c0072t0004g0045 a0013c0124t0003g0047 others(3): Show |
6 | 154 | 0.0390 | 5 | c.51+ others(22): Show |
RYR3 | ENSG00000198838.15 | transcript | ENST00000634891.2 | protein_coding | 1/103 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
RYR3_chr15_33305967_33871102 | 33368338 | C | CTTTTT | intron_variant | MODIFIER | HG02040.hp1 HG02717.hp2 HG02922.hp1 others(4): Show |
a0001a0002a0004others(3): Show | a0001c0001a0001c0058a0002c0088others(4): Show | a0001c0001t0002a0001c0058t0002a0002c0088t0002others(4): Show | a0001c0001t0002g0101 a0001c0058t0002g0073 a0002c0088t0002g0072 others(4): Show |
7 | 154 | 0.0455 | 5 | c.51+ others(22): Show |
RYR3 | ENSG00000198838.15 | transcript | ENST00000634891.2 | protein_coding | 1/103 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
RYR3_chr15_33305967_33871102 | 33382319 | C | CTTTTT | intron_variant | MODIFIER | HG01070.hp1 HG01071.hp2 HG01255.hp2 others(22): Show |
a0001a0002a0003others(12): Show | a0001c0002a0001c0037a0001c0046others(21): Show | a0001c0002t0002a0001c0037t0003a0001c0046t0011others(21): Show | a0001c0002t0002g0102 a0001c0037t0003g0089 a0001c0046t0011g0065 others(22): Show |
25 | 154 | 0.1623 | 5 | c.51+ others(22): Show |
RYR3 | ENSG00000198838.15 | transcript | ENST00000634891.2 | protein_coding | 1/103 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
RYR3_chr15_33305967_33871102 | 33385710 | C | CTTTTT | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00408.hp1 others(54): Show |
a0001a0002a0003others(18): Show | a0001c0001a0001c0002a0001c0003others(49): Show | a0001c0001t0002a0001c0001t0010a0001c0002t0007others(51): Show | a0001c0001t0002g0030 a0001c0001t0010g0094 a0001c0002t0007g0146 others(54): Show |
57 | 154 | 0.3701 | 5 | c.51+ others(22): Show |
RYR3 | ENSG00000198838.15 | transcript | ENST00000634891.2 | protein_coding | 1/103 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
RYR3_chr15_33305967_33871102 | 33450087 | T | TAAAAA | intron_variant | MODIFIER | HG00323.hp1 HG00323.hp2 HG00558.hp2 others(10): Show |
a0001a0004a0006others(1): Show | a0001c0001a0001c0002a0001c0004others(6): Show | a0001c0001t0001a0001c0001t0002a0001c0002t0001others(10): Show | a0001c0001t0001g0140 a0001c0001t0002g0101 a0001c0002t0001g0018 others(10): Show |
13 | 154 | 0.0844 | 5 | c.52- others(22): Show |
RYR3 | ENSG00000198838.15 | transcript | ENST00000634891.2 | protein_coding | 1/103 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
RYR3_chr15_33305967_33871102 | 33460940 | C | CTTTTT | intron_variant | MODIFIER | HG01255.hp2 HG01884.hp1 HG01891.hp1 others(15): Show |
a0001a0002a0003others(6): Show | a0001c0010a0001c0037a0001c0083others(14): Show | a0001c0010t0001a0001c0037t0003a0001c0083t0001others(14): Show | a0001c0010t0001g0051 a0001c0010t0001g0142 a0001c0037t0003g0089 others(15): Show |
18 | 154 | 0.1169 | 5 | c.52- others(22): Show |
RYR3 | ENSG00000198838.15 | transcript | ENST00000634891.2 | protein_coding | 1/103 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
RYR3_chr15_33305967_33871102 | 33475050 | T | TTTTTG | intron_variant | MODIFIER | HG02622.hp2 HG02630.hp2 HG03195.hp2 |
a0003a0040 | a0003c0077a0003c0078a0040c0038 | a0003c0077t0003a0003c0078t0003a0040c0038t0008 | a0003c0077t0003g0012 a0003c0078t0003g0024 a0040c0038t0008g0016 |
3 | 154 | 0.0195 | 5 | c.171 others(22): Show |
RYR3 | ENSG00000198838.15 | transcript | ENST00000634891.2 | protein_coding | 2/103 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
RYR3_chr15_33305967_33871102 | 33477575 | T | TAAAAA | intron_variant | MODIFIER | HG01070.hp1 HG01071.hp2 HG01243.hp2 others(26): Show |
a0001a0002a0003others(13): Show | a0001c0037a0001c0047a0001c0058others(25): Show | a0001c0037t0003a0001c0047t0001a0001c0058t0002others(25): Show | a0001c0037t0003g0089 a0001c0047t0001g0135 a0001c0058t0002g0073 others(26): Show |
29 | 154 | 0.1883 | 5 | c.171 others(22): Show |
RYR3 | ENSG00000198838.15 | transcript | ENST00000634891.2 | protein_coding | 2/103 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
RYR3_chr15_33305967_33871102 | 33537416 | G | GTAACT | intron_variant | MODIFIER | HG02717.hp2 HG03098.hp2 HG03130.hp2 others(3): Show |
a0001a0002a0005 | a0001c0014a0001c0047a0002c0080others(2): Show | a0001c0014t0002a0001c0047t0001a0002c0080t0002others(2): Show | a0001c0014t0002g0015 a0001c0014t0002g0049 a0001c0047t0001g0135 others(3): Show |
6 | 154 | 0.0390 | 5 | c.434 others(22): Show |
RYR3 | ENSG00000198838.15 | transcript | ENST00000634891.2 | protein_coding | 5/103 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
RYR3_chr15_33305967_33871102 | 33578767 | A | AAAAAG | intron_variant | MODIFIER | HG00323.hp1 HG00642.hp2 HG00735.hp1 others(62): Show |
a0001a0002a0003others(22): Show | a0001c0003a0001c0005a0001c0013others(50): Show | a0001c0003t0001a0001c0003t0002a0001c0003t0006others(57): Show | a0001c0003t0001g0006 a0001c0003t0001g0032 a0001c0003t0002g0036 others(62): Show |
65 | 154 | 0.4221 | 5 | c.126 others(24): Show |
RYR3 | ENSG00000198838.15 | transcript | ENST00000634891.2 | protein_coding | 12/103 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
RYR3_chr15_33305967_33871102 | 33598246 | C | CAAAAA | intron_variant | MODIFIER | HG00323.hp1 HG00408.hp1 HG00558.hp1 others(35): Show |
a0001a0002a0004others(15): Show | a0001c0001a0001c0002a0001c0003others(24): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(29): Show | a0001c0001t0001g0044 a0001c0001t0001g0096 a0001c0001t0002g0030 others(35): Show |
38 | 154 | 0.2468 | 5 | c.178 others(24): Show |
RYR3 | ENSG00000198838.15 | transcript | ENST00000634891.2 | protein_coding | 16/103 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
RYR3_chr15_33305967_33871102 | 33668063 | G | GAAAAA | intron_variant | MODIFIER | HG02109.hp2 HG02615.hp2 HG02738.hp2 others(4): Show |
a0001a0004a0005others(2): Show | a0001c0037a0001c0098a0001c0101others(4): Show | a0001c0037t0003a0001c0098t0001a0001c0101t0001others(4): Show | a0001c0037t0003g0089 a0001c0098t0001g0151 a0001c0101t0001g0128 others(4): Show |
7 | 154 | 0.0455 | 5 | c.562 others(24): Show |
RYR3 | ENSG00000198838.15 | transcript | ENST00000634891.2 | protein_coding | 36/103 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
RYR3_chr15_33305967_33871102 | 33741598 | A | AGTTTT | intron_variant | MODIFIER | HG00140.hp2 HG01884.hp1 |
a0002a0005 | a0002c0049a0005c0030 | a0002c0049t0003a0005c0030t0001 | a0002c0049t0003g0013 a0005c0030t0001g0007 |
2 | 154 | 0.0130 | 5 | c.782 others(22): Show |
RYR3 | ENSG00000198838.15 | transcript | ENST00000634891.2 | protein_coding | 51/103 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
RYR3_chr15_33305967_33871102 | 33765030 | C | CAAAAA | intron_variant | MODIFIER | HG00558.hp2 HG00642.hp1 HG01109.hp1 others(30): Show |
a0001a0002a0003others(14): Show | a0001c0001a0001c0005a0001c0010others(26): Show | a0001c0001t0001a0001c0001t0010a0001c0005t0001others(28): Show | a0001c0001t0001g0140 a0001c0001t0010g0094 a0001c0005t0001g0127 others(30): Show |
33 | 154 | 0.2143 | 5 | c.870 others(24): Show |
RYR3 | ENSG00000198838.15 | transcript | ENST00000634891.2 | protein_coding | 60/103 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
RYR3_chr15_33305967_33871102 | 33789659 | T | TATATA | intron_variant | MODIFIER | HG00323.hp2 HG02055.hp2 HG02109.hp2 others(4): Show |
a0001a0003a0004others(3): Show | a0001c0084a0003c0122a0004c0069others(4): Show | a0001c0084t0003a0003c0122t0008a0004c0069t0006others(4): Show | a0001c0084t0003g0054 a0003c0122t0008g0062 a0004c0069t0006g0009 others(4): Show |
7 | 154 | 0.0455 | 5 | c.983 others(24): Show |
RYR3 | ENSG00000198838.15 | transcript | ENST00000634891.2 | protein_coding | 67/103 | chr15 | TogoVar | |||||||
RYR3_chr15_33305967_33871102 | 33822645 | C | CTTTCA | intron_variant | MODIFIER | HG01070.hp1 HG01071.hp2 HG02717.hp1 |
a0012a0034 | a0012c0011a0034c0105 | a0012c0011t0009a0034c0105t0002 | a0012c0011t0009g0066 a0012c0011t0009g0067 a0034c0105t0002g0134 |
3 | 154 | 0.0195 | 5 | c.109 others(24): Show |
RYR3 | ENSG00000198838.15 | transcript | ENST00000634891.2 | protein_coding | 80/103 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
RYR3_chr15_33305967_33871102 | 33863431 | G | GAAGGA | intron_variant | MODIFIER | HG02965.hp2 NA18522.hp2 |
a0001a0038 | a0001c0083a0038c0020 | a0001c0083t0001a0038c0020t0001 | a0001c0083t0001g0143 a0038c0020t0001g0074 |
2 | 154 | 0.0130 | 5 | c.144 others(24): Show |
RYR3 | ENSG00000198838.15 | transcript | ENST00000634891.2 | protein_coding | 102/103 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
S100A12_chr1_153368711_153380621 | 153369737 | C | CTCCCT | downstream_gene_variant | MODIFIER | HG01433.hp2 HG02109.hp1 HG02109.hp2 others(13): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0001 a0001c0001t0002g0004 |
16 | 366 | 0.0437 | 5 | c.*40 others(16): Show |
S100A12 | ENSG00000163221.9 | transcript | ENST00000368737.5 | protein_coding | 3973 | chr1 | TogoVar | |||||||
S100A6_chr1_153529599_153540991 | 153539448 | A | ATATAT | upstream_gene_variant | MODIFIER | HG01993.hp1 NA19083.hp1 NA19083.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 a0001c0001t0001g0002 |
3 | 380 | 0.0079 | 5 | c.-35 others(16): Show |
S100A6 | ENSG00000197956.10 | transcript | ENST00000368719.9 | protein_coding | 3458 | chr1 | TogoVar | |||||||
S100G_chrX_16645158_16659670 | 16647255 | C | CTTTTT | upstream_gene_variant | MODIFIER | HG01069.hp1 HG03098.hp1 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0004 | a0001c0001t0001g0007 a0001c0001t0004g0019 |
2 | 348 | 0.0058 | 5 | c.-29 others(16): Show |
S100G | ENSG00000169906.5 | transcript | ENST00000380200.3 | protein_coding | 2902 | chrX | TogoVar | |||||||
S100G_chrX_16645158_16659670 | 16648432 | T | TTGAAA | upstream_gene_variant | MODIFIER | NA20905.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 | 1 | 348 | 0.0029 | 5 | c.-17 others(16): Show |
S100G | ENSG00000169906.5 | transcript | ENST00000380200.3 | protein_coding | 1725 | chrX | TogoVar | |||||||
S100Z_chr5_76845014_76926650 | 76888367 | A | ATTTTT | intron_variant | MODIFIER | HG01167.hp2 HG02809.hp1 HG02818.hp1 others(8): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(3): Show | a0001c0001t0001g0086 a0001c0001t0003g0065 a0001c0001t0005g0055 others(8): Show |
11 | 348 | 0.0316 | 5 | c.*2+ others(22): Show |
S100Z | ENSG00000171643.14 | transcript | ENST00000317593.9 | protein_coding | 4/4 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
S1PR3_chr9_88986468_89010155 | 88990394 | A | AGAATC | upstream_gene_variant | MODIFIER | HG00099.hp2 HG00280.hp1 HG00323.hp1 others(208): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0002a0001c0010others(5): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(29): Show | a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0005 others(84): Show |
211 | 402 | 0.5249 | 5 | c.-14 others(16): Show |
S1PR3 | ENSG00000213694.7 | transcript | ENST00000358157.3 | protein_coding | 1073 | chr9 | TogoVar | |||||||
SAA1_chr11_18261264_18274967 | 18271957 | C | CAACTT | downstream_gene_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(329): Show |
a0001a0002a0003others(8): Show | a0001c0002a0001c0004a0001c0009others(13): Show | a0001c0002t0001a0001c0004t0001a0001c0004t0003others(15): Show | a0001c0002t0001g0001 a0001c0002t0001g0004 a0001c0002t0001g0011 others(65): Show |
332 | 442 | 0.7511 | 5 | c.*21 others(16): Show |
SAA1 | ENSG00000173432.13 | transcript | ENST00000356524.9 | protein_coding | 1991 | chr11 | TogoVar | |||||||
SAA2_chr11_18240240_18253668 | 18246050 | T | TGGAAA | splice_region_variant others(1): Show |
LOW | HG00621.hp2 HG00642.hp1 HG01099.hp2 others(40): Show |
a0001 | a0001c0001a0001c0007 | a0001c0001t0001a0001c0007t0001 | a0001c0001t0001g0005 a0001c0001t0001g0017 a0001c0001t0001g0026 others(9): Show |
43 | 474 | 0.0907 | 5 | c.92- others(14): Show |
SAA2 | ENSG00000134339.9 | transcript | ENST00000256733.9 | protein_coding | 2/3 | chr11 | TogoVar | |||||||
SAA4_chr11_18226355_18241802 | 18228270 | T | TAAATA | downstream_gene_variant | MODIFIER | HG02896.hp1 HG02970.hp1 HG03130.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0027 a0001c0001t0001g0066 a0001c0001t0001g0067 |
5 | 418 | 0.0120 | 5 | c.*32 others(16): Show |
SAA4 | ENSG00000148965.10 | transcript | ENST00000278222.7 | protein_coding | 3084 | chr11 | TogoVar | |||||||
SAAL1_chr11_18075292_18111082 | 18077001 | G | GAAAAA | downstream_gene_variant | MODIFIER | HG01891.hp1 HG02109.hp2 HG02300.hp1 others(12): Show |
a0002a0004 | a0002c0002a0004c0004 | a0002c0002t0001a0004c0004t0001 | a0002c0002t0001g0045 a0002c0002t0001g0055 a0004c0004t0001g0017 others(7): Show |
15 | 284 | 0.0528 | 5 | c.*33 others(16): Show |
SAAL1 | ENSG00000166788.10 | transcript | ENST00000524803.6 | protein_coding | 3290 | chr11 | TogoVar | |||||||
SAAL1_chr11_18075292_18111082 | 18091253 | A | ACTATT | intron_variant | MODIFIER | HG00099.hp2 HG00280.hp2 HG00323.hp1 others(130): Show |
a0001a0002a0003others(5): Show | a0001c0001a0001c0007a0001c0016others(8): Show | a0001c0001t0001a0001c0007t0001a0001c0016t0001others(8): Show | a0001c0001t0001g0005 a0001c0001t0001g0010 a0001c0001t0001g0011 others(60): Show |
133 | 284 | 0.4683 | 5 | c.414 others(20): Show |
SAAL1 | ENSG00000166788.10 | transcript | ENST00000524803.6 | protein_coding | 4/11 | chr11 | TogoVar | |||||||
SAC3D1_chr11_65036210_65049828 | 65043615 | C | CAAAAA | intron_variant | MODIFIER | HG00741.hp2 HG01071.hp2 HG01074.hp1 others(24): Show |
a0001a0007a0009 | a0001c0002a0007c0007a0009c0009 | a0001c0002t0001a0007c0007t0001a0009c0009t0001 | a0001c0002t0001g0004 a0001c0002t0001g0022 a0001c0002t0001g0046 others(3): Show |
27 | 352 | 0.0767 | 5 | c.575 others(20): Show |
SAC3D1 | ENSG00000168061.17 | transcript | ENST00000652489.1 | protein_coding | 1/1 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
SACM1L_chr3_45684396_45750409 | 45686663 | A | ATTTTT | upstream_gene_variant | MODIFIER | HG01081.hp2 HG01358.hp2 HG01891.hp1 others(3): Show |
a0001 | a0001c0003 | a0001c0003t0002 | a0001c0003t0002g0006 a0001c0003t0002g0012 a0001c0003t0002g0082 others(3): Show |
6 | 354 | 0.0170 | 5 | c.-28 others(16): Show |
SACM1L | ENSG00000211456.14 | transcript | ENST00000389061.10 | protein_coding | 2732 | chr3 | TogoVar | |||||||
SACM1L_chr3_45684396_45750409 | 45697269 | C | CTTTTT | intron_variant | MODIFIER | HG00438.hp2 HG00621.hp1 HG01081.hp2 others(35): Show |
a0001a0002 | a0001c0002a0001c0003a0001c0007others(1): Show | a0001c0002t0002a0001c0003t0002a0001c0007t0002others(1): Show | a0001c0002t0002g0261 a0001c0002t0002g0262 a0001c0003t0002g0003 others(23): Show |
38 | 354 | 0.1073 | 5 | c.33- others(20): Show |
SACM1L | ENSG00000211456.14 | transcript | ENST00000389061.10 | protein_coding | 1/19 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
SACM1L_chr3_45684396_45750409 | 45724334 | T | TGTGTG | intron_variant | MODIFIER | HG01515.hp2 NA18980.hp1 NA18980.hp2 |
a0001a0002 | a0001c0002a0002c0001 | a0001c0002t0012a0002c0001t0001 | a0001c0002t0012g0118 a0002c0001t0001g0196 a0002c0001t0001g0247 |
3 | 354 | 0.0085 | 5 | c.921 others(20): Show |
SACM1L | ENSG00000211456.14 | transcript | ENST00000389061.10 | protein_coding | 11/19 | chr3 | TogoVar | |||||||
SACS_chr13_23323830_23438702 | 23429345 | A | ATTTTT | intron_variant | MODIFIER | HG01943.hp2 HG03491.hp1 HG03927.hp2 others(7): Show |
a0001a0002a0003others(1): Show | a0001c0002a0001c0003a0001c0004others(4): Show | a0001c0002t0002a0001c0003t0007a0001c0004t0002others(4): Show | a0001c0002t0002g0121 a0001c0002t0002g0123 a0001c0003t0007g0122 others(7): Show |
10 | 378 | 0.0265 | 5 | c.-50 others(24): Show |
SACS | ENSG00000151835.17 | transcript | ENST00000382292.9 | protein_coding | 1/9 | chr13 | TogoVar | |||||||
SAE1_chr19_47125835_47215636 | 47129821 | C | CTTTCT | upstream_gene_variant | MODIFIER | HG00438.hp1 HG00738.hp2 HG01257.hp2 others(14): Show |
a0001 | a0001c0001a0001c0012 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(1): Show | a0001c0001t0001g0010 a0001c0001t0001g0082 a0001c0001t0001g0128 others(14): Show |
17 | 380 | 0.0447 | 5 | c.-11 others(16): Show |
SAE1 | ENSG00000142230.13 | transcript | ENST00000270225.12 | protein_coding | 1013 | chr19 | TogoVar | |||||||
SAE1_chr19_47125835_47215636 | 47184798 | T | TTTTTG | intron_variant | MODIFIER | HG01361.hp1 HG02257.hp1 HG02717.hp2 others(5): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0123 a0001c0001t0001g0137 a0001c0001t0001g0148 others(5): Show |
8 | 380 | 0.0211 | 5 | c.734 others(24): Show |
SAE1 | ENSG00000142230.13 | transcript | ENST00000270225.12 | protein_coding | 6/8 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | ||||||
SAE1_chr19_47125835_47215636 | 47201360 | C | CTTTTT | intron_variant | MODIFIER | HG00408.hp2 HG00738.hp2 HG01081.hp2 others(18): Show |
a0001a0007 | a0001c0001a0007c0010 | a0001c0001t0001a0001c0001t0004a0007c0010t0001 | a0001c0001t0001g0002 a0001c0001t0001g0027 a0001c0001t0001g0047 others(18): Show |
21 | 380 | 0.0553 | 5 | c.879 others(22): Show |
SAE1 | ENSG00000142230.13 | transcript | ENST00000270225.12 | protein_coding | 7/8 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | ||||||
SAFB_chr19_5618083_5673478 | 5642651 | C | CTTTTT | intron_variant | MODIFIER | HG01346.hp1 HG01993.hp1 HG02027.hp2 others(5): Show |
a0001a0003 | a0001c0001a0001c0002a0003c0005 | a0001c0001t0001a0001c0002t0001a0003c0005t0001 | a0001c0001t0001g0042 a0001c0001t0001g0188 a0001c0002t0001g0016 others(5): Show |
8 | 282 | 0.0284 | 5 | c.546 others(20): Show |
SAFB | ENSG00000160633.13 | transcript | ENST00000588852.2 | protein_coding | 4/20 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | ||||||
SAFB_chr19_5618083_5673478 | 5645870 | T | TTTTTG | intron_variant | MODIFIER | HG00639.hp1 HG01952.hp2 HG01993.hp2 others(1): Show |
a0001a0002 | a0001c0001a0002c0013 | a0001c0001t0001a0002c0013t0001 | a0001c0001t0001g0221 a0001c0001t0001g0224 a0001c0001t0001g0225 others(1): Show |
4 | 282 | 0.0142 | 5 | c.609 others(20): Show |
SAFB | ENSG00000160633.13 | transcript | ENST00000588852.2 | protein_coding | 5/20 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | ||||||
SAGE1_chrX_135888716_135918062 | 135896523 | A | ATTTAT | intron_variant | MODIFIER | HG01167.hp1 HG02148.hp2 NA19089.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0018 a0001c0001t0001g0048 |
3 | 249 | 0.0121 | 5 | c.87+ others(18): Show |
SAGE1 | ENSG00000181433.12 | transcript | ENST00000370709.4 | protein_coding | 2/19 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||||
SAGSIN1_chr7_6324411_6353967 | 6352698 | C | CTTTTT | upstream_gene_variant | MODIFIER | HG00408.hp2 HG00597.hp2 HG00673.hp2 others(40): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(8): Show | a0001c0001t0001g0006 a0001c0001t0001g0134 a0001c0001t0001g0141 others(40): Show |
43 | 420 | 0.1024 | 5 | c.-39 others(16): Show |
SAGSIN1 | ENSG00000286075.3 | transcript | ENST00000578372.2 | protein_coding | 3732 | chr7 | TogoVar | |||||||
SAG_chr2_233302816_233352055 | 233310556 | C | CTGGAG | intron_variant | MODIFIER | HG01069.hp1 HG01257.hp1 HG01258.hp2 others(3): Show |
a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0001 a0002c0002t0001g0329 a0002c0002t0001g0330 |
6 | 368 | 0.0163 | 5 | c.75+ others(20): Show |
SAG | ENSG00000130561.17 | transcript | ENST00000409110.6 | protein_coding | 2/15 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SAG_chr2_233302816_233352055 | 233332663 | A | ATTTTT | intron_variant | MODIFIER | HG01175.hp1 HG02647.hp2 HG03516.hp1 others(3): Show |
a0001a0002a0015 | a0001c0001a0002c0002a0015c0017 | a0001c0001t0001a0002c0002t0001a0015c0017t0001 | a0001c0001t0001g0011 a0001c0001t0001g0012 a0002c0002t0001g0149 others(3): Show |
6 | 368 | 0.0163 | 5 | c.806 others(20): Show |
SAG | ENSG00000130561.17 | transcript | ENST00000409110.6 | protein_coding | 10/15 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SALL1_chr16_51130982_51156270 | 51139874 | T | TGCTGC | frameshift_variant | HIGH | NA18963.hp1 | a0023 | a0023c0036 | a0023c0036t0001 | a0023c0036t0001g0080 | 1 | 374 | 0.0027 | 5 | c.234 others(14): Show |
p.Gln others(5): Show |
SALL1 | ENSG00000103449.13 | transcript | ENST00000251020.9 | protein_coding | 2/3 | 2376/5134 | 2347/3975 | 783/1324 | chr16 | TogoVar | |||
SALL4_chr20_51777331_51807521 | 51792688 | C | CAAAAA | intron_variant | MODIFIER | HG00323.hp2 HG00639.hp2 HG00741.hp1 others(15): Show |
a0001a0003a0004others(1): Show | a0001c0003a0003c0004a0004c0009others(1): Show | a0001c0003t0048a0003c0004t0001a0003c0004t0010others(7): Show | a0001c0003t0048g0191 a0003c0004t0001g0090 a0003c0004t0010g0022 others(13): Show |
18 | 384 | 0.0469 | 5 | c.131 others(20): Show |
SALL4 | ENSG00000101115.13 | transcript | ENST00000217086.9 | protein_coding | 1/3 | chr20 | TogoVar | |||||||
SALL4_chr20_51777331_51807521 | 51798845 | A | AAAAAC | intron_variant | MODIFIER | HG02145.hp2 HG02630.hp1 HG02717.hp2 others(2): Show |
a0002a0004a0009 | a0002c0002a0004c0009a0009c0016 | a0002c0002t0001a0004c0009t0020a0004c0009t0033others(1): Show | a0002c0002t0001g0229 a0004c0009t0020g0021 a0004c0009t0033g0086 others(1): Show |
5 | 384 | 0.0130 | 5 | c.130 others(22): Show |
SALL4 | ENSG00000101115.13 | transcript | ENST00000217086.9 | protein_coding | 1/3 | chr20 | TogoVar |