Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
SSBP3_chr1_54220432_54411394	54302318	A A	ATTTTT ATTTTT	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02559.hp1 HG02723.hp1 others(7): Show HG02451.hp1 HG02559.hp1 HG02723.hp1 HG02965.hp1 HG02970.hp1 HG02976.hp2 HG03041.hp2 HG03139.hp1 HG03471.hp1 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0004 a0001c0005 a0001c0001 a0001c0004 a0001c0005	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 a0001c0001t0024 a0001c0004t0002 a0001c0005t0025	a0001c0001t0001g0138 a0001c0001t0002g0094 a0001c0001t0004g0045 others(7): Show a0001c0001t0001g0138 a0001c0001t0002g0094 a0001c0001t0004g0045 a0001c0001t0005g0034 a0001c0001t0005g0040 a0001c0001t0005g0077 a0001c0001t0024g0050 a0001c0001t0024g0140 a0001c0004t0002g0078 a0001c0005t0025g0129	10	133	0.0752	5	c.277 others(24): Show c.277-20796_277-20792dupAAAAA	SSBP3	ENSG00000157216.17	transcript	ENST00000610401.6	protein_coding	4/17			chr1	TogoVar
SSBP3_chr1_54220432_54411394	54316669	T T	TAAAAA TAAAAA	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02257.hp2 HG02572.hp2 others(10): Show HG01884.hp2 HG02257.hp2 HG02572.hp2 HG02615.hp1 HG02647.hp1 HG02723.hp1 HG02723.hp2 HG02895.hp2 HG02897.hp1 HG03139.hp2 HG03239.hp1 HG03486.hp1 HG03516.hp2	a0001 a0001	a0001c0001 a0001c0004 a0001c0009 a0001c0001 a0001c0004 a0001c0009	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0001t0013 a0001c0001t0016 a0001c0001t0022 a0001c0004t0020 a0001c0009t0001	a0001c0001t0001g0061 a0001c0001t0001g0088 a0001c0001t0001g0125 others(10): Show a0001c0001t0001g0061 a0001c0001t0001g0088 a0001c0001t0001g0125 a0001c0001t0002g0046 a0001c0001t0005g0019 a0001c0001t0005g0034 a0001c0001t0005g0076 a0001c0001t0013g0031 a0001c0001t0016g0063 a0001c0001t0016g0109 a0001c0001t0022g0279 a0001c0004t0020g0092 a0001c0009t0001g0124	13	242	0.0537	5	c.277 others(24): Show c.277-35143_277-35142insTTTTT	SSBP3	ENSG00000157216.17	transcript	ENST00000610401.6	protein_coding	4/17			chr1	TogoVar
SSBP3_chr1_54220432_54411394	54327587	T T	TCTCTC TCTCTC	intron_variant intron_variant	MODIFIER	HG03654.hp2 HG03710.hp2 HG03942.hp2 others(1): Show HG03654.hp2 HG03710.hp2 HG03942.hp2 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0005 a0001c0001t0009 others(1): Show a0001c0001t0003 a0001c0001t0005 a0001c0001t0009 a0001c0001t0012	a0001c0001t0003g0229 a0001c0001t0005g0065 a0001c0001t0009g0175 others(1): Show a0001c0001t0003g0229 a0001c0001t0005g0065 a0001c0001t0009g0175 a0001c0001t0012g0004	4	278	0.0144	5	c.277 others(24): Show c.277-46061_277-46060insGAGAG	SSBP3	ENSG00000157216.17	transcript	ENST00000610401.6	protein_coding	4/17			chr1	TogoVar
SSB_chr2_169793871_169817064	169800534	C C	CAAAAA CAAAAA	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00140.hp1 HG00423.hp1 others(136): Show HG00099.hp1 HG00140.hp1 HG00423.hp1 HG00423.hp2 HG00544.hp1 HG00558.hp1 HG00558.hp2 HG00609.hp2 HG00642.hp1 HG00673.hp1 HG00673.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG01069.hp2 HG01070.hp1 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01106.hp1 HG01123.hp1 HG01167.hp1 HG01167.hp2 HG01169.hp1 HG01175.hp1 HG01192.hp2 HG01243.hp2 HG01261.hp2 HG01361.hp2 HG01496.hp1 HG01515.hp2 HG01516.hp1 HG01517.hp1 HG01517.hp2 HG01943.hp2 HG01975.hp1 HG01978.hp1 HG02015.hp2 HG02027.hp2 HG02074.hp1 HG02080.hp1 HG02083.hp2 HG02129.hp1 HG02132.hp2 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02293.hp1 HG02451.hp1 HG02559.hp1 HG02630.hp2 HG02647.hp1 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02735.hp2 HG02809.hp1 HG03195.hp1 HG03490.hp2 HG03491.hp1 HG03492.hp1 HG03669.hp1 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03831.hp1 HG03834.hp2 HG03942.hp1 HG04115.hp1 HG04184.hp2 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 NA18612.hp1 NA18612.hp2 NA18747.hp2 NA18939.hp2 NA18940.hp2 NA18941.hp1 NA18942.hp2 NA18945.hp1 NA18945.hp2 NA18947.hp1 NA18947.hp2 NA18948.hp2 NA18949.hp2 NA18950.hp1 NA18951.hp1 NA18952.hp1 NA18953.hp1 NA18953.hp2 NA18960.hp2 NA18964.hp2 NA18966.hp1 NA18968.hp1 NA18971.hp1 NA18973.hp1 NA18975.hp1 NA18976.hp2 NA18978.hp1 NA18979.hp2 NA18980.hp1 NA18980.hp2 NA18982.hp1 NA18983.hp2 NA18986.hp1 NA18986.hp2 NA18987.hp1 NA18989.hp1 NA18992.hp1 NA18993.hp1 NA18993.hp2 NA18994.hp1 NA18994.hp2 NA18995.hp2 NA18999.hp1 NA19000.hp1 NA19003.hp1 NA19004.hp1 NA19007.hp2 NA19009.hp1 NA19011.hp1 NA19055.hp2 NA19056.hp1 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp2 NA19068.hp1 NA19068.hp2 NA19074.hp1 NA19083.hp2 NA19085.hp1 NA19087.hp2 NA19090.hp1 NA20752.hp2 NA20805.hp1 NA20805.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0006 a0001c0001t0001 a0001c0001t0006	a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 others(42): Show a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0006 a0001c0001t0001g0014 a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0027 a0001c0001t0001g0028 a0001c0001t0001g0045 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0051 a0001c0001t0001g0077 a0001c0001t0001g0127 a0001c0001t0001g0137 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0140 a0001c0001t0001g0141 a0001c0001t0001g0151 a0001c0001t0001g0152 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0001g0155 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0162 a0001c0001t0001g0163 a0001c0001t0001g0164 a0001c0001t0001g0165 a0001c0001t0001g0166 a0001c0001t0001g0167 a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0175 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0178 a0001c0001t0006g0003	139	147	0.9456	5	c.-9- others(18): Show c.-9-403_-9-399dupAAAAA	SSB	ENSG00000138385.16	transcript	ENST00000260956.9	protein_coding	1/11		INFO_REALIGN_3_PRIME	chr2	TogoVar
SSB_chr2_169793871_169817064	169807737	C C	CTTTTT CTTTTT	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00408.hp1 HG00423.hp1 others(55): Show HG00140.hp1 HG00408.hp1 HG00423.hp1 HG00423.hp2 HG00544.hp1 HG00673.hp2 HG00735.hp2 HG00738.hp1 HG01069.hp2 HG01070.hp1 HG01081.hp2 HG01123.hp1 HG01978.hp2 HG02015.hp2 HG02027.hp2 HG02074.hp1 HG02080.hp1 HG02083.hp2 HG02165.hp2 HG02273.hp2 HG02293.hp2 HG02451.hp1 HG02559.hp1 HG02602.hp1 HG02602.hp2 HG02683.hp1 HG02683.hp2 HG03490.hp2 HG03831.hp1 HG04115.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 NA18612.hp1 NA18940.hp2 NA18947.hp2 NA18950.hp1 NA18968.hp2 NA18978.hp1 NA18980.hp2 NA18986.hp1 NA18986.hp2 NA18992.hp2 NA18993.hp2 NA19000.hp1 NA19004.hp1 NA19007.hp2 NA19009.hp1 NA19056.hp1 NA19065.hp1 NA19068.hp2 NA19081.hp1 NA19083.hp2 NA19085.hp1 NA20752.hp2 NA20805.hp1 NA20805.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0006 a0001c0001t0001 a0001c0001t0006	a0001c0001t0001g0003 a0001c0001t0001g0006 a0001c0001t0001g0013 others(18): Show a0001c0001t0001g0003 a0001c0001t0001g0006 a0001c0001t0001g0013 a0001c0001t0001g0019 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0049 a0001c0001t0001g0076 a0001c0001t0001g0127 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0148 a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0162 a0001c0001t0001g0163 a0001c0001t0001g0168 a0001c0001t0001g0174 a0001c0001t0001g0175 a0001c0001t0001g0176 a0001c0001t0006g0003	58	239	0.2427	5	c.554 others(20): Show c.554+685_554+689dupTTTTT	SSB	ENSG00000138385.16	transcript	ENST00000260956.9	protein_coding	6/11		INFO_REALIGN_3_PRIME	chr2	TogoVar
SSC4D_chr7_76384337_76414697	76402182	A A	ATTTTT ATTTTT	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00735.hp1 HG01123.hp1 others(11): Show HG00099.hp1 HG00735.hp1 HG01123.hp1 HG01358.hp2 HG01515.hp2 HG01993.hp2 HG03490.hp1 HG03704.hp2 HG03942.hp2 HG04184.hp2 HG04199.hp1 NA18974.hp1 NA19000.hp2 NA20752.hp2	a0001 a0006 a0001 a0006	a0001c0004 a0001c0005 a0006c0009 a0001c0004 a0001c0005 a0006c0009	a0001c0004t0003 a0001c0005t0001 a0006c0009t0003 a0001c0004t0003 a0001c0005t0001 a0006c0009t0003	a0001c0004t0003g0070 a0001c0004t0003g0071 a0001c0004t0003g0073 others(11): Show a0001c0004t0003g0070 a0001c0004t0003g0071 a0001c0004t0003g0073 a0001c0004t0003g0089 a0001c0004t0003g0090 a0001c0004t0003g0091 a0001c0004t0003g0093 a0001c0004t0003g0094 a0001c0004t0003g0100 a0001c0004t0003g0101 a0001c0004t0003g0106 a0001c0005t0001g0271 a0001c0005t0001g0293 a0006c0009t0003g0141	14	243	0.0576	5	c.134 others(22): Show c.134-1144_134-1140dupAAAAA	SSC4D	ENSG00000146700.9	transcript	ENST00000275560.4	protein_coding	2/10			chr7	TogoVar
SSC4D_chr7_76384337_76414697	76411013	A A	AAAAAG AAAAAG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp1 HG00140.hp2 HG00423.hp2 others(97): Show HG00099.hp1 HG00140.hp2 HG00423.hp2 HG00558.hp1 HG00673.hp1 HG00735.hp1 HG00738.hp1 HG01074.hp1 HG01081.hp1 HG01081.hp2 HG01099.hp2 HG01123.hp1 HG01123.hp2 HG01256.hp1 HG01258.hp1 HG01261.hp1 HG01261.hp2 HG01358.hp1 HG01358.hp2 HG01515.hp2 HG01928.hp1 HG01943.hp1 HG01975.hp2 HG01993.hp2 HG02015.hp1 HG02040.hp1 HG02056.hp1 HG02080.hp1 HG02148.hp2 HG02165.hp1 HG02258.hp1 HG02293.hp2 HG02300.hp1 HG02486.hp1 HG02523.hp2 HG02615.hp1 HG02622.hp1 HG02630.hp1 HG02809.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02897.hp2 HG03017.hp2 HG03130.hp2 HG03139.hp2 HG03195.hp2 HG03471.hp1 HG03490.hp1 HG03688.hp1 HG03704.hp1 HG03704.hp2 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03942.hp1 HG03942.hp2 HG04115.hp1 HG04184.hp1 HG04184.hp2 HG04199.hp2 HG06807.hp1 NA18612.hp1 NA18747.hp1 NA18906.hp1 NA18941.hp1 NA18942.hp1 NA18943.hp1 NA18944.hp1 NA18946.hp1 NA18950.hp1 NA18955.hp2 NA18956.hp1 NA18956.hp2 NA18960.hp2 NA18965.hp1 NA18969.hp2 NA18971.hp1 NA18974.hp1 NA18975.hp2 NA18980.hp1 NA18981.hp1 NA18982.hp2 NA18983.hp1 NA18985.hp2 NA18990.hp2 NA18991.hp1 NA18992.hp1 NA18997.hp1 NA19007.hp2 NA19054.hp1 NA19054.hp2 NA19060.hp2 NA19062.hp1 NA19064.hp1 NA19070.hp2 NA20752.hp1 NA20752.hp2 NA20905.hp1	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0004 a0006 a0007	a0001c0001 a0001c0004 a0001c0005 others(7): Show a0001c0001 a0001c0004 a0001c0005 a0002c0002 a0002c0014 a0003c0003 a0003c0013 a0004c0006 a0006c0009 a0007c0010	a0001c0001t0001 a0001c0004t0003 a0001c0005t0002 others(9): Show a0001c0001t0001 a0001c0004t0003 a0001c0005t0002 a0002c0002t0001 a0002c0002t0002 a0002c0002t0006 a0002c0014t0001 a0003c0003t0001 a0003c0013t0001 a0004c0006t0001 a0006c0009t0003 a0007c0010t0003	a0001c0001t0001g0003 a0001c0001t0001g0226 a0001c0004t0003g0070 others(73): Show a0001c0001t0001g0003 a0001c0001t0001g0226 a0001c0004t0003g0070 a0001c0004t0003g0071 a0001c0004t0003g0072 a0001c0004t0003g0073 a0001c0004t0003g0085 a0001c0004t0003g0087 a0001c0004t0003g0088 a0001c0004t0003g0089 a0001c0004t0003g0090 a0001c0004t0003g0091 a0001c0004t0003g0092 a0001c0004t0003g0093 a0001c0004t0003g0094 a0001c0004t0003g0098 a0001c0004t0003g0100 a0001c0004t0003g0101 a0001c0004t0003g0103 a0001c0004t0003g0104 a0001c0004t0003g0106 a0001c0004t0003g0107 a0001c0004t0003g0108 a0001c0005t0002g0131 a0002c0002t0001g0023 a0002c0002t0001g0128 a0002c0002t0002g0001 a0002c0002t0002g0004 a0002c0002t0002g0010 a0002c0002t0002g0020 a0002c0002t0002g0021 a0002c0002t0002g0022 a0002c0002t0002g0059 a0002c0002t0002g0062 a0002c0002t0002g0063 a0002c0002t0002g0064 a0002c0002t0002g0065 a0002c0002t0002g0067 a0002c0002t0002g0069 a0002c0002t0002g0074 a0002c0002t0002g0075 a0002c0002t0002g0076 a0002c0002t0002g0077 a0002c0002t0002g0113 a0002c0002t0002g0114 a0002c0002t0002g0115 a0002c0002t0002g0116 a0002c0002t0002g0117 a0002c0002t0002g0118 a0002c0002t0002g0119 a0002c0002t0002g0120 a0002c0002t0002g0121 a0002c0002t0002g0122 a0002c0002t0002g0124 a0002c0002t0002g0125 a0002c0002t0002g0126 a0002c0002t0002g0127 a0002c0002t0002g0130 a0002c0002t0002g0133 a0002c0002t0002g0139 a0002c0002t0002g0140 a0002c0002t0006g0066 a0002c0014t0001g0129 a0003c0003t0001g0024 a0003c0003t0001g0136 a0003c0003t0001g0138 a0003c0013t0001g0137 a0004c0006t0001g0060 a0004c0006t0001g0061 a0006c0009t0003g0095 a0006c0009t0003g0099 a0006c0009t0003g0109 a0006c0009t0003g0141 a0007c0010t0003g0097 a0007c0010t0003g0102 a0007c0010t0003g0105	100	300	0.3333	5	c.-16 others(16): Show c.-1671_-1667dupCTTTT	SSC4D	ENSG00000146700.9	transcript	ENST00000275560.4	protein_coding		1317		chr7	TogoVar
SSC4D_chr7_76384337_76414697	76412962	C C	CTTTTT CTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00140.hp2 HG01081.hp2 HG01123.hp1 others(22): Show HG00140.hp2 HG01081.hp2 HG01123.hp1 HG01255.hp1 HG01358.hp2 HG01515.hp1 HG01515.hp2 HG01517.hp1 HG01993.hp2 HG02135.hp2 HG02523.hp1 HG02809.hp1 HG02895.hp1 HG03490.hp1 HG03927.hp1 HG03942.hp2 HG04199.hp2 HG06807.hp1 NA18747.hp1 NA18906.hp1 NA18956.hp2 NA19054.hp1 NA19090.hp1 NA20752.hp2 NA20905.hp1	a0001 a0006 a0001 a0006	a0001c0001 a0001c0004 a0001c0005 others(1): Show a0001c0001 a0001c0004 a0001c0005 a0006c0009	a0001c0001t0001 a0001c0004t0003 a0001c0005t0001 others(1): Show a0001c0001t0001 a0001c0004t0003 a0001c0005t0001 a0006c0009t0003	a0001c0001t0001g0253 a0001c0001t0001g0254 a0001c0001t0001g0255 others(22): Show a0001c0001t0001g0253 a0001c0001t0001g0254 a0001c0001t0001g0255 a0001c0004t0003g0070 a0001c0004t0003g0072 a0001c0004t0003g0073 a0001c0004t0003g0085 a0001c0004t0003g0086 a0001c0004t0003g0087 a0001c0004t0003g0088 a0001c0004t0003g0089 a0001c0004t0003g0090 a0001c0004t0003g0093 a0001c0004t0003g0098 a0001c0004t0003g0101 a0001c0004t0003g0103 a0001c0004t0003g0104 a0001c0004t0003g0106 a0001c0004t0003g0107 a0001c0004t0003g0108 a0001c0005t0001g0279 a0006c0009t0003g0095 a0006c0009t0003g0096 a0006c0009t0003g0099 a0006c0009t0003g0109	25	257	0.0973	5	c.-36 others(16): Show c.-3616_-3615insAAAAA	SSC4D	ENSG00000146700.9	transcript	ENST00000275560.4	protein_coding		3266		chr7	TogoVar
SSC5D_chr19_55483436_55524099	55493987	C C	CGGGGG CGGGGG	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00438.hp1 HG00438.hp2 others(78): Show HG00280.hp1 HG00438.hp1 HG00438.hp2 HG00544.hp2 HG00597.hp2 HG00609.hp1 HG00621.hp2 HG00673.hp1 HG00735.hp1 HG00738.hp2 HG00741.hp1 HG01074.hp2 HG01099.hp2 HG01106.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp2 HG01175.hp2 HG01256.hp1 HG01257.hp1 HG01257.hp2 HG01433.hp2 HG01516.hp2 HG01884.hp2 HG01975.hp1 HG01978.hp1 HG01981.hp1 HG02056.hp1 HG02056.hp2 HG02074.hp2 HG02129.hp2 HG02135.hp1 HG02135.hp2 HG02155.hp1 HG02257.hp2 HG02258.hp1 HG02647.hp1 HG02683.hp1 HG02683.hp2 HG02735.hp2 HG02738.hp2 HG02976.hp1 HG03139.hp1 HG03209.hp1 HG03225.hp1 HG03491.hp1 HG03704.hp2 HG03710.hp1 HG03831.hp1 HG04184.hp1 HG04184.hp2 HG04204.hp1 NA18522.hp2 NA18944.hp1 NA18954.hp1 NA18956.hp1 NA18956.hp2 NA18964.hp1 NA18966.hp2 NA18968.hp1 NA18973.hp1 NA18975.hp1 NA18975.hp2 NA18979.hp2 NA18980.hp2 NA18983.hp2 NA18984.hp1 NA18990.hp2 NA18999.hp1 NA19007.hp1 NA19011.hp2 NA19030.hp1 NA19063.hp1 NA19065.hp1 NA19070.hp2 NA19079.hp1 NA19082.hp1 NA19082.hp2 NA19090.hp2 NA20300.hp2 NA20752.hp2	a0001 a0002 a0003 others(18): Show a0001 a0002 a0003 a0004 a0005 a0006 a0007 a0008 a0009 a0010 a0011 a0012 a0013 a0019 a0026 a0027 a0028 a0039 a0044 a0045 a0048	a0001c0001 a0001c0006 a0001c0010 others(38): Show a0001c0001 a0001c0006 a0001c0010 a0001c0013 a0001c0082 a0001c0084 a0001c0099 a0001c0102 a0002c0002 a0002c0003 a0002c0023 a0002c0046 a0002c0065 a0003c0007 a0003c0011 a0003c0016 a0003c0030 a0003c0083 a0004c0015 a0004c0050 a0005c0005 a0005c0018 a0005c0060 a0006c0008 a0006c0024 a0007c0009 a0008c0012 a0009c0014 a0010c0057 a0011c0019 a0011c0052 a0012c0021 a0013c0045 a0019c0047 a0026c0034 a0027c0035 a0028c0063 a0039c0095 a0044c0080 a0045c0081 a0048c0055	a0001c0001t0001 a0001c0006t0001 a0001c0010t0001 others(40): Show a0001c0001t0001 a0001c0006t0001 a0001c0010t0001 a0001c0013t0001 a0001c0082t0001 a0001c0084t0001 a0001c0099t0001 a0001c0102t0001 a0002c0002t0002 a0002c0002t0003 a0002c0003t0001 a0002c0003t0002 a0002c0023t0002 a0002c0046t0002 a0002c0065t0002 a0003c0007t0002 a0003c0011t0002 a0003c0016t0002 a0003c0030t0002 a0003c0083t0002 a0004c0015t0001 a0004c0050t0001 a0005c0005t0001 a0005c0018t0001 a0005c0060t0001 a0006c0008t0001 a0006c0024t0001 a0007c0009t0002 a0008c0012t0001 a0009c0014t0001 a0010c0057t0001 a0011c0019t0002 a0011c0052t0002 a0012c0021t0002 a0013c0045t0001 a0019c0047t0002 a0026c0034t0002 a0027c0035t0001 a0028c0063t0001 a0039c0095t0001 a0044c0080t0002 a0045c0081t0001 a0048c0055t0001	a0001c0001t0001g0011 a0001c0001t0001g0020 a0001c0001t0001g0032 others(78): Show a0001c0001t0001g0011 a0001c0001t0001g0020 a0001c0001t0001g0032 a0001c0001t0001g0054 a0001c0001t0001g0088 a0001c0001t0001g0095 a0001c0001t0001g0100 a0001c0001t0001g0117 a0001c0001t0001g0121 a0001c0001t0001g0131 a0001c0001t0001g0147 a0001c0001t0001g0253 a0001c0006t0001g0190 a0001c0006t0001g0235 a0001c0006t0001g0252 a0001c0006t0001g0408 a0001c0010t0001g0404 a0001c0010t0001g0406 a0001c0013t0001g0053 a0001c0013t0001g0135 a0001c0013t0001g0139 a0001c0082t0001g0225 a0001c0084t0001g0200 a0001c0099t0001g0278 a0001c0102t0001g0269 a0002c0002t0002g0092 a0002c0002t0002g0093 a0002c0002t0002g0254 a0002c0002t0002g0261 a0002c0002t0002g0306 a0002c0002t0002g0309 a0002c0002t0002g0312 a0002c0002t0003g0089 a0002c0002t0003g0214 a0002c0003t0001g0383 a0002c0003t0002g0030 a0002c0003t0002g0046 a0002c0003t0002g0123 a0002c0003t0002g0326 a0002c0023t0002g0061 a0002c0046t0002g0398 a0002c0065t0002g0118 a0003c0007t0002g0078 a0003c0007t0002g0113 a0003c0007t0002g0115 a0003c0007t0002g0122 a0003c0011t0002g0008 a0003c0016t0002g0107 a0003c0030t0002g0316 a0003c0030t0002g0318 a0003c0083t0002g0246 a0004c0015t0001g0043 a0004c0015t0001g0077 a0004c0050t0001g0120 a0005c0005t0001g0203 a0005c0005t0001g0205 a0005c0005t0001g0224 a0005c0005t0001g0378 a0005c0018t0001g0323 a0005c0060t0001g0324 a0006c0008t0001g0160 a0006c0024t0001g0099 a0007c0009t0002g0249 a0007c0009t0002g0307 a0007c0009t0002g0345 a0008c0012t0001g0174 a0009c0014t0001g0164 a0010c0057t0001g0134 a0011c0019t0002g0319 a0011c0019t0002g0395 a0011c0052t0002g0386 a0012c0021t0002g0199 a0013c0045t0001g0355 a0019c0047t0002g0351 a0026c0034t0002g0037 a0027c0035t0001g0103 a0028c0063t0001g0320 a0039c0095t0001g0217 a0044c0080t0002g0302 a0045c0081t0001g0275 a0048c0055t0001g0039	81	86	0.9419	5	c.121 others(20): Show c.1213+78_1213+82dupGGGGG	SSC5D	ENSG00000179954.16	transcript	ENST00000389623.11	protein_coding	7/13		INFO_REALIGN_3_PRIME	chr19	TogoVar
SSC5D_chr19_55483436_55524099	55506373	A A	ATTTTT ATTTTT	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG02717.hp2 HG02818.hp1 others(6): Show HG01891.hp1 HG02717.hp2 HG02818.hp1 HG02895.hp1 HG02897.hp2 HG03130.hp2 HG03139.hp1 HG03471.hp1 HG03540.hp2	a0002 a0015 a0025 a0002 a0015 a0025	a0002c0002 a0002c0003 a0015c0027 others(1): Show a0002c0002 a0002c0003 a0015c0027 a0025c0039	a0002c0002t0001 a0002c0003t0001 a0015c0027t0001 others(1): Show a0002c0002t0001 a0002c0003t0001 a0015c0027t0001 a0025c0039t0001	a0002c0002t0001g0210 a0002c0003t0001g0004 a0002c0003t0001g0274 others(5): Show a0002c0002t0001g0210 a0002c0003t0001g0004 a0002c0003t0001g0274 a0002c0003t0001g0383 a0015c0027t0001g0393 a0015c0027t0001g0394 a0025c0039t0001g0390 a0025c0039t0001g0391	9	18	0.5000	5	c.278 others(24): Show c.2785+5207_2785+5211dupTTTTT	SSC5D	ENSG00000179954.16	transcript	ENST00000389623.11	protein_coding	12/13		INFO_REALIGN_3_PRIME	chr19	TogoVar
SSC5D_chr19_55483436_55524099	55512365	C C	CAAAAA CAAAAA	intron_variant intron_variant	MODIFIER	HG00673.hp1 HG01081.hp1 HG01168.hp1 others(18): Show HG00673.hp1 HG01081.hp1 HG01168.hp1 HG01169.hp2 HG01243.hp2 HG01358.hp1 HG02080.hp1 HG02145.hp1 HG02451.hp2 HG02717.hp1 HG02896.hp2 HG02897.hp1 HG02970.hp2 HG03490.hp2 HG03492.hp1 NA18522.hp1 NA18979.hp2 NA18986.hp2 NA19005.hp2 NA19083.hp2 NA21309.hp2	a0002 a0003 a0007 others(4): Show a0002 a0003 a0007 a0008 a0010 a0014 a0018	a0002c0002 a0003c0007 a0003c0016 others(7): Show a0002c0002 a0003c0007 a0003c0016 a0003c0017 a0003c0040 a0007c0009 a0008c0012 a0010c0036 a0014c0022 a0018c0043	a0002c0002t0002 a0003c0007t0002 a0003c0016t0002 others(7): Show a0002c0002t0002 a0003c0007t0002 a0003c0016t0002 a0003c0017t0002 a0003c0040t0002 a0007c0009t0002 a0008c0012t0001 a0010c0036t0001 a0014c0022t0001 a0018c0043t0001	a0002c0002t0002g0092 a0002c0002t0002g0093 a0002c0002t0002g0169 others(18): Show a0002c0002t0002g0092 a0002c0002t0002g0093 a0002c0002t0002g0169 a0003c0007t0002g0036 a0003c0007t0002g0080 a0003c0007t0002g0113 a0003c0007t0002g0115 a0003c0016t0002g0262 a0003c0017t0002g0259 a0003c0017t0002g0303 a0003c0040t0002g0296 a0003c0040t0002g0297 a0007c0009t0002g0268 a0008c0012t0001g0175 a0010c0036t0001g0388 a0010c0036t0001g0389 a0014c0022t0001g0165 a0014c0022t0001g0166 a0014c0022t0001g0167 a0018c0043t0001g0350 a0018c0043t0001g0379	21	39	0.5385	5	c.278 others(22): Show c.2786-636_2786-632dupAAAAA	SSC5D	ENSG00000179954.16	transcript	ENST00000389623.11	protein_coding	12/13		INFO_REALIGN_3_PRIME	chr19	TogoVar
SSH1_chr12_108773191_108862583	108813744	A A	AAGGGG AAGGGG	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02965.hp1 HG03225.hp2 HG02257.hp2 HG02965.hp1 HG03225.hp2	a0001 a0001	a0001c0003 a0001c0008 a0001c0003 a0001c0008	a0001c0003t0001 a0001c0008t0036 a0001c0008t0037 a0001c0003t0001 a0001c0008t0036 a0001c0008t0037	a0001c0003t0001g0226 a0001c0008t0036g0308 a0001c0008t0037g0307 a0001c0003t0001g0226 a0001c0008t0036g0308 a0001c0008t0037g0307	3	330	0.0091	5	c.402 others(22): Show c.402-2421_402-2417dupCCCCT	SSH1	ENSG00000084112.15	transcript	ENST00000326495.10	protein_coding	5/14			chr12	TogoVar
SSH1_chr12_108773191_108862583	108859881	A A	AGGAGG AGGAGG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02165.hp2 HG02523.hp1 HG02717.hp1 others(3): Show HG02165.hp2 HG02523.hp1 HG02717.hp1 HG03927.hp2 NA18949.hp1 NA18949.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0007 a0001c0002t0001 a0001c0002t0048 others(1): Show a0001c0001t0007 a0001c0002t0001 a0001c0002t0048 a0001c0002t0052	a0001c0001t0007g0210 a0001c0002t0001g0079 a0001c0002t0001g0081 others(3): Show a0001c0001t0007g0210 a0001c0002t0001g0079 a0001c0002t0001g0081 a0001c0002t0001g0092 a0001c0002t0048g0096 a0001c0002t0052g0077	6	317	0.0189	5	c.-23 others(16): Show c.-2390_-2386dupCCTCC	SSH1	ENSG00000084112.15	transcript	ENST00000326495.10	protein_coding		2299		chr12	TogoVar
SSH1_chr12_108773191_108862583	108859906	A A	AGGAGG AGGAGG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02109.hp1 NA18954.hp2 NA18979.hp2 others(1): Show HG02109.hp1 NA18954.hp2 NA18979.hp2 NA19086.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0006 a0001c0001t0061 a0001c0001t0004 a0001c0001t0006 a0001c0001t0061	a0001c0001t0004g0162 a0001c0001t0004g0298 a0001c0001t0006g0008 others(1): Show a0001c0001t0004g0162 a0001c0001t0004g0298 a0001c0001t0006g0008 a0001c0001t0061g0195	4	325	0.0123	5	c.-24 others(16): Show c.-2415_-2411dupCCTCC	SSH1	ENSG00000084112.15	transcript	ENST00000326495.10	protein_coding		2324		chr12	TogoVar
SSH1_chr12_108773191_108862583	108859936	G G	GGGAGA GGGAGA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02129.hp2 HG02523.hp2 HG03017.hp1 others(3): Show HG02129.hp2 HG02523.hp2 HG03017.hp1 HG03239.hp2 HG03688.hp1 NA18941.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0013 a0001c0001 a0001c0002 a0001c0013	a0001c0001t0014 a0001c0001t0080 a0001c0002t0001 others(1): Show a0001c0001t0014 a0001c0001t0080 a0001c0002t0001 a0001c0013t0014	a0001c0001t0014g0219 a0001c0001t0014g0220 a0001c0001t0014g0221 others(3): Show a0001c0001t0014g0219 a0001c0001t0014g0220 a0001c0001t0014g0221 a0001c0001t0080g0223 a0001c0002t0001g0222 a0001c0013t0014g0023	6	324	0.0185	5	c.-24 others(16): Show c.-2441_-2440insTCTCC	SSH1	ENSG00000084112.15	transcript	ENST00000326495.10	protein_coding		2354		chr12	TogoVar
SSH1_chr12_108773191_108862583	108859946	A A	AGGAGG AGGAGG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02129.hp2 HG02523.hp2 HG03017.hp1 others(3): Show HG02129.hp2 HG02523.hp2 HG03017.hp1 HG03239.hp2 HG03688.hp1 NA18941.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0013 a0001c0001 a0001c0002 a0001c0013	a0001c0001t0014 a0001c0001t0080 a0001c0002t0001 others(1): Show a0001c0001t0014 a0001c0001t0080 a0001c0002t0001 a0001c0013t0014	a0001c0001t0014g0219 a0001c0001t0014g0220 a0001c0001t0014g0221 others(3): Show a0001c0001t0014g0219 a0001c0001t0014g0220 a0001c0001t0014g0221 a0001c0001t0080g0223 a0001c0002t0001g0222 a0001c0013t0014g0023	6	300	0.0200	5	c.-24 others(16): Show c.-2455_-2451dupCCTCC	SSH1	ENSG00000084112.15	transcript	ENST00000326495.10	protein_coding		2364		chr12	TogoVar
SSH1_chr12_108773191_108862583	108859986	A A	AGGAGG AGGAGG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00140.hp1 HG01074.hp2 HG01167.hp2 others(3): Show HG00140.hp1 HG01074.hp2 HG01167.hp2 HG01169.hp1 HG01517.hp2 NA18973.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0001t0062 a0001c0002t0003 others(1): Show a0001c0001t0002 a0001c0001t0062 a0001c0002t0003 a0001c0002t0076	a0001c0001t0002g0134 a0001c0001t0002g0137 a0001c0001t0062g0133 others(3): Show a0001c0001t0002g0134 a0001c0001t0002g0137 a0001c0001t0062g0133 a0001c0002t0003g0272 a0001c0002t0003g0273 a0001c0002t0076g0271	6	229	0.0262	5	c.-24 others(16): Show c.-2495_-2491dupCCTCC	SSH1	ENSG00000084112.15	transcript	ENST00000326495.10	protein_coding		2404		chr12	TogoVar
SSH2_chr17_29620938_29935228	29657574	G G	GTTTTT GTTTTT	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG00621.hp2 HG00639.hp2 others(21): Show HG00423.hp2 HG00621.hp2 HG00639.hp2 HG00733.hp1 HG01109.hp1 HG01952.hp2 HG02056.hp2 HG02074.hp2 HG02148.hp2 HG02257.hp2 HG02258.hp2 HG02280.hp2 HG02572.hp2 HG02647.hp1 HG02683.hp1 HG02738.hp2 HG03490.hp2 HG03516.hp2 HG03942.hp1 HG04228.hp2 NA18971.hp1 NA19000.hp2 NA19064.hp2 NA19066.hp2	a0001 a0008 a0001 a0008	a0001c0001 a0008c0015 a0001c0001 a0008c0015	a0001c0001t0001 a0001c0001t0007 a0001c0001t0013 others(2): Show a0001c0001t0001 a0001c0001t0007 a0001c0001t0013 a0001c0001t0035 a0008c0015t0001	a0001c0001t0001g0004 a0001c0001t0001g0019 a0001c0001t0001g0023 others(21): Show a0001c0001t0001g0004 a0001c0001t0001g0019 a0001c0001t0001g0023 a0001c0001t0001g0028 a0001c0001t0001g0030 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0054 a0001c0001t0001g0057 a0001c0001t0001g0063 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0081 a0001c0001t0001g0215 a0001c0001t0007g0062 a0001c0001t0013g0085 a0001c0001t0013g0086 a0001c0001t0035g0232 a0008c0015t0001g0044	24	84	0.2857	5	c.103 others(24): Show c.1033-1972_1033-1968dupAAAAA	SSH2	ENSG00000141298.19	transcript	ENST00000540801.6	protein_coding	11/15			chr17	TogoVar
SSH2_chr17_29620938_29935228	29680551	C C	CAAAAA CAAAAA	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00323.hp2 HG01109.hp2 others(20): Show HG00280.hp2 HG00323.hp2 HG01109.hp2 HG01169.hp1 HG01255.hp1 HG01256.hp2 HG01346.hp2 HG01993.hp2 HG02055.hp2 HG02257.hp2 HG02622.hp2 HG02630.hp2 HG02735.hp1 HG03139.hp2 HG03540.hp1 HG03834.hp1 HG04204.hp2 NA18966.hp1 NA18998.hp2 NA19030.hp2 NA19043.hp1 NA19064.hp2 NA19084.hp1	a0001 a0009 a0001 a0009	a0001c0001 a0009c0017 a0001c0001 a0009c0017	a0001c0001t0001 a0001c0001t0003 a0001c0001t0025 others(1): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0025 a0009c0017t0001	a0001c0001t0001g0009 a0001c0001t0001g0021 a0001c0001t0001g0027 others(20): Show a0001c0001t0001g0009 a0001c0001t0001g0021 a0001c0001t0001g0027 a0001c0001t0001g0030 a0001c0001t0001g0032 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0046 a0001c0001t0001g0055 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0003g0088 a0001c0001t0003g0093 a0001c0001t0003g0094 a0001c0001t0003g0095 a0001c0001t0003g0097 a0001c0001t0003g0100 a0001c0001t0003g0115 a0001c0001t0003g0116 a0001c0001t0025g0056 a0009c0017t0001g0039	23	72	0.3194	5	c.480 others(22): Show c.480-2815_480-2811dupTTTTT	SSH2	ENSG00000141298.19	transcript	ENST00000540801.6	protein_coding	6/15			chr17	TogoVar
SSH2_chr17_29620938_29935228	29724528	C C	CAAAAA CAAAAA	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG00558.hp2 HG00621.hp1 others(19): Show HG00423.hp1 HG00558.hp2 HG00621.hp1 HG02074.hp1 HG02135.hp1 HG02523.hp2 HG02622.hp1 HG02630.hp1 HG02683.hp2 HG03195.hp2 HG03225.hp1 HG03471.hp2 HG03579.hp2 HG03942.hp2 NA18949.hp2 NA18952.hp1 NA18955.hp1 NA18966.hp2 NA19004.hp2 NA19043.hp2 NA19066.hp1 NA19084.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0007 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0007 a0001c0001t0019 a0001c0001t0030 a0001c0001t0033 a0002c0002t0002	a0001c0001t0001g0145 a0001c0001t0001g0171 a0001c0001t0002g0135 others(19): Show a0001c0001t0001g0145 a0001c0001t0001g0171 a0001c0001t0002g0135 a0001c0001t0002g0140 a0001c0001t0002g0141 a0001c0001t0002g0143 a0001c0001t0002g0146 a0001c0001t0002g0147 a0001c0001t0002g0149 a0001c0001t0002g0151 a0001c0001t0002g0160 a0001c0001t0002g0166 a0001c0001t0002g0174 a0001c0001t0002g0178 a0001c0001t0002g0226 a0001c0001t0002g0227 a0001c0001t0007g0161 a0001c0001t0007g0218 a0001c0001t0019g0165 a0001c0001t0030g0156 a0001c0001t0033g0170 a0002c0002t0002g0181	22	117	0.1880	5	c.189 others(24): Show c.189-21471_189-21467dupTTTTT	SSH2	ENSG00000141298.19	transcript	ENST00000540801.6	protein_coding	3/15			chr17	TogoVar
SSH2_chr17_29620938_29935228	29725347	C C	CAAAAA CAAAAA	intron_variant intron_variant	MODIFIER	HG01167.hp2 HG01884.hp1 HG02258.hp1 others(3): Show HG01167.hp2 HG01884.hp1 HG02258.hp1 HG02622.hp1 HG03130.hp2 HG03491.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0004c0005 a0001c0001 a0004c0005	a0001c0001t0002 a0001c0001t0011 a0004c0005t0002 a0001c0001t0002 a0001c0001t0011 a0004c0005t0002	a0001c0001t0002g0117 a0001c0001t0002g0174 a0001c0001t0002g0228 others(3): Show a0001c0001t0002g0117 a0001c0001t0002g0174 a0001c0001t0002g0228 a0001c0001t0002g0230 a0001c0001t0011g0136 a0004c0005t0002g0188	6	19	0.3158	5	c.189 others(24): Show c.189-22290_189-22286dupTTTTT	SSH2	ENSG00000141298.19	transcript	ENST00000540801.6	protein_coding	3/15			chr17	TogoVar
SSH2_chr17_29620938_29935228	29736786	C C	CAAAAA CAAAAA	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG01256.hp1 HG01496.hp2 others(14): Show HG01243.hp2 HG01256.hp1 HG01496.hp2 HG01517.hp2 HG01891.hp1 HG02148.hp1 HG02523.hp2 HG02698.hp2 HG02738.hp1 HG03041.hp2 HG03486.hp1 HG03669.hp2 HG04199.hp1 HG04204.hp1 NA18998.hp1 NA19007.hp1 NA20752.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0002c0002 a0003c0004 a0001c0001 a0002c0002 a0003c0004	a0001c0001t0001 a0001c0001t0004 a0002c0002t0002 others(5): Show a0001c0001t0001 a0001c0001t0004 a0002c0002t0002 a0002c0002t0005 a0002c0002t0009 a0002c0002t0012 a0002c0002t0024 a0003c0004t0004	a0001c0001t0001g0171 a0001c0001t0004g0124 a0001c0001t0004g0125 others(14): Show a0001c0001t0001g0171 a0001c0001t0004g0124 a0001c0001t0004g0125 a0002c0002t0002g0177 a0002c0002t0002g0191 a0002c0002t0002g0192 a0002c0002t0002g0193 a0002c0002t0002g0199 a0002c0002t0002g0213 a0002c0002t0002g0220 a0002c0002t0005g0203 a0002c0002t0005g0205 a0002c0002t0009g0209 a0002c0002t0012g0153 a0002c0002t0024g0189 a0003c0004t0004g0121 a0003c0004t0004g0122	17	94	0.1809	5	c.189 others(24): Show c.189-33729_189-33725dupTTTTT	SSH2	ENSG00000141298.19	transcript	ENST00000540801.6	protein_coding	3/15			chr17	TogoVar
SSH2_chr17_29620938_29935228	29738545	T T	TTTTTA TTTTTA	intron_variant intron_variant	MODIFIER	HG02615.hp1 HG02723.hp2 HG03225.hp2 others(1): Show HG02615.hp1 HG02723.hp2 HG03225.hp2 HG03471.hp1	a0001 a0014 a0001 a0014	a0001c0001 a0014c0016 a0001c0001 a0014c0016	a0001c0001t0015 a0001c0001t0020 a0014c0016t0017 a0001c0001t0015 a0001c0001t0020 a0014c0016t0017	a0001c0001t0015g0007 a0001c0001t0015g0008 a0001c0001t0020g0006 others(1): Show a0001c0001t0015g0007 a0001c0001t0015g0008 a0001c0001t0020g0006 a0014c0016t0017g0005	4	230	0.0174	5	c.189 others(24): Show c.189-35488_189-35484dupTAAAA	SSH2	ENSG00000141298.19	transcript	ENST00000540801.6	protein_coding	3/15			chr17	TogoVar
SSH2_chr17_29620938_29935228	29758045	T T	TCAAAA TCAAAA	intron_variant intron_variant	MODIFIER	HG03139.hp2 NA19043.hp1 HG03139.hp2 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0115 a0001c0001t0003g0116 a0001c0001t0003g0115 a0001c0001t0003g0116	2	230	0.0087	5	c.188 others(24): Show c.188+35844_188+35848dupTTTTG	SSH2	ENSG00000141298.19	transcript	ENST00000540801.6	protein_coding	3/15			chr17	TogoVar
SSH2_chr17_29620938_29935228	29779810	C C	CAAAAA CAAAAA	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG00733.hp1 HG01517.hp1 others(15): Show HG00639.hp1 HG00733.hp1 HG01517.hp1 HG02074.hp1 HG02258.hp1 HG02523.hp2 HG02683.hp2 HG03139.hp1 HG03225.hp1 HG03471.hp2 HG03516.hp1 HG03579.hp2 NA18952.hp1 NA18955.hp1 NA18966.hp2 NA19004.hp2 NA19007.hp1 NA19084.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0007 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0007 a0001c0001t0033 a0002c0002t0002 a0002c0002t0005	a0001c0001t0001g0145 a0001c0001t0001g0171 a0001c0001t0001g0215 others(15): Show a0001c0001t0001g0145 a0001c0001t0001g0171 a0001c0001t0001g0215 a0001c0001t0002g0146 a0001c0001t0002g0147 a0001c0001t0002g0149 a0001c0001t0002g0166 a0001c0001t0002g0173 a0001c0001t0002g0180 a0001c0001t0002g0227 a0001c0001t0002g0230 a0001c0001t0007g0161 a0001c0001t0007g0218 a0001c0001t0033g0170 a0002c0002t0002g0181 a0002c0002t0002g0213 a0002c0002t0002g0225 a0002c0002t0005g0206	18	101	0.1782	5	c.188 others(24): Show c.188+14079_188+14083dupTTTTT	SSH2	ENSG00000141298.19	transcript	ENST00000540801.6	protein_coding	3/15			chr17	TogoVar
SSH2_chr17_29620938_29935228	29784065	C C	CAAAAA CAAAAA	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00423.hp1 HG00558.hp2 others(34): Show HG00408.hp1 HG00423.hp1 HG00558.hp2 HG00621.hp1 HG01884.hp1 HG01891.hp1 HG01934.hp1 HG01978.hp1 HG02135.hp1 HG02258.hp1 HG02622.hp1 HG03017.hp1 HG03139.hp1 HG03225.hp1 HG03471.hp2 HG03490.hp1 HG03516.hp1 HG03579.hp2 HG03704.hp2 HG03942.hp2 HG04115.hp2 HG04204.hp1 HG04228.hp1 NA18522.hp2 NA18949.hp2 NA18955.hp1 NA18964.hp2 NA18986.hp1 NA18991.hp2 NA19000.hp1 NA19004.hp2 NA19007.hp1 NA19043.hp2 NA19064.hp1 NA19066.hp1 NA19240.hp2 NA20129.hp2	a0001 a0002 a0016 a0001 a0002 a0016	a0001c0001 a0001c0006 a0002c0002 others(1): Show a0001c0001 a0001c0006 a0002c0002 a0016c0014	a0001c0001t0002 a0001c0001t0007 a0001c0001t0030 others(4): Show a0001c0001t0002 a0001c0001t0007 a0001c0001t0030 a0001c0001t0033 a0001c0006t0016 a0002c0002t0002 a0016c0014t0008	a0001c0001t0002g0135 a0001c0001t0002g0139 a0001c0001t0002g0140 others(34): Show a0001c0001t0002g0135 a0001c0001t0002g0139 a0001c0001t0002g0140 a0001c0001t0002g0141 a0001c0001t0002g0143 a0001c0001t0002g0148 a0001c0001t0002g0150 a0001c0001t0002g0151 a0001c0001t0002g0155 a0001c0001t0002g0160 a0001c0001t0002g0162 a0001c0001t0002g0166 a0001c0001t0002g0174 a0001c0001t0002g0178 a0001c0001t0002g0179 a0001c0001t0002g0180 a0001c0001t0002g0182 a0001c0001t0002g0207 a0001c0001t0002g0223 a0001c0001t0002g0227 a0001c0001t0002g0228 a0001c0001t0002g0230 a0001c0001t0007g0218 a0001c0001t0030g0156 a0001c0001t0033g0170 a0001c0006t0016g0076 a0002c0002t0002g0175 a0002c0002t0002g0181 a0002c0002t0002g0192 a0002c0002t0002g0193 a0002c0002t0002g0196 a0002c0002t0002g0198 a0002c0002t0002g0200 a0002c0002t0002g0210 a0002c0002t0002g0213 a0002c0002t0002g0225 a0016c0014t0008g0172	37	105	0.3524	5	c.188 others(22): Show c.188+9824_188+9828dupTTTTT	SSH2	ENSG00000141298.19	transcript	ENST00000540801.6	protein_coding	3/15			chr17	TogoVar
SSH2_chr17_29620938_29935228	29895611	A A	AAAATG AAAATG	intron_variant intron_variant	MODIFIER	HG02615.hp1 HG02723.hp2 HG03225.hp2 others(1): Show HG02615.hp1 HG02723.hp2 HG03225.hp2 HG03471.hp1	a0001 a0014 a0001 a0014	a0001c0001 a0014c0016 a0001c0001 a0014c0016	a0001c0001t0015 a0001c0001t0020 a0014c0016t0017 a0001c0001t0015 a0001c0001t0020 a0014c0016t0017	a0001c0001t0015g0007 a0001c0001t0015g0008 a0001c0001t0020g0006 others(1): Show a0001c0001t0015g0007 a0001c0001t0015g0008 a0001c0001t0020g0006 a0014c0016t0017g0005	4	230	0.0174	5	c.63+ others(22): Show c.63+34326_63+34327insCATTT	SSH2	ENSG00000141298.19	transcript	ENST00000540801.6	protein_coding	1/15			chr17	TogoVar
SSPN_chr12_26190573_26239777	26201031	A A	ATATAT ATATAT	intron_variant intron_variant	MODIFIER	HG01167.hp1 HG01891.hp1 HG02027.hp2 others(1): Show HG01167.hp1 HG01891.hp1 HG02027.hp2 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0004 a0001c0001 a0001c0002 a0001c0004	a0001c0001t0013 a0001c0002t0005 a0001c0004t0004 a0001c0001t0013 a0001c0002t0005 a0001c0004t0004	a0001c0001t0013g0004 a0001c0002t0005g0128 a0001c0002t0005g0129 others(1): Show a0001c0001t0013g0004 a0001c0002t0005g0128 a0001c0002t0005g0129 a0001c0004t0004g0004	4	335	0.0119	5	c.279 others(22): Show c.279+5081_279+5085dupTATAT	SSPN	ENSG00000123096.12	transcript	ENST00000242729.7	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr12	TogoVar
SSPN_chr12_26190573_26239777	26201046	T T	TATATA TATATA	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00423.hp1 HG00639.hp1 others(36): Show HG00408.hp1 HG00423.hp1 HG00639.hp1 HG00639.hp2 HG00673.hp1 HG00733.hp2 HG01081.hp1 HG01081.hp2 HG01109.hp2 HG01243.hp2 HG01361.hp2 HG01981.hp1 HG01981.hp2 HG02074.hp1 HG02155.hp2 HG02300.hp1 HG02559.hp2 HG02615.hp1 HG03017.hp2 NA18747.hp2 NA18945.hp1 NA18948.hp1 NA18959.hp2 NA18963.hp1 NA18970.hp2 NA18972.hp2 NA18973.hp2 NA18975.hp2 NA18986.hp1 NA18986.hp2 NA18993.hp1 NA18994.hp2 NA18999.hp1 NA19004.hp1 NA19004.hp2 NA19009.hp2 NA19058.hp2 NA19072.hp1 NA19082.hp2	a0001 a0006 a0001 a0006	a0001c0001 a0001c0002 a0006c0008 a0001c0001 a0001c0002 a0006c0008	a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 others(11): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0007 a0001c0001t0011 a0001c0001t0019 a0001c0001t0024 a0001c0001t0026 a0001c0001t0042 a0001c0001t0044 a0001c0001t0052 a0001c0001t0056 a0001c0002t0005 a0006c0008t0008	a0001c0001t0002g0003 a0001c0001t0002g0019 a0001c0001t0002g0024 others(25): Show a0001c0001t0002g0003 a0001c0001t0002g0019 a0001c0001t0002g0024 a0001c0001t0002g0045 a0001c0001t0002g0059 a0001c0001t0002g0062 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0082 a0001c0001t0002g0170 a0001c0001t0003g0002 a0001c0001t0003g0005 a0001c0001t0003g0023 a0001c0001t0004g0027 a0001c0001t0007g0003 a0001c0001t0007g0057 a0001c0001t0011g0023 a0001c0001t0011g0055 a0001c0001t0019g0064 a0001c0001t0024g0085 a0001c0001t0026g0015 a0001c0001t0042g0002 a0001c0001t0044g0002 a0001c0001t0052g0071 a0001c0001t0056g0081 a0001c0002t0005g0018 a0001c0002t0005g0248 a0006c0008t0008g0155	39	249	0.1566	5	c.279 others(22): Show c.279+5095_279+5096insATATA	SSPN	ENSG00000123096.12	transcript	ENST00000242729.7	protein_coding	1/2			chr12	TogoVar
SSR1_chr6_7276143_7318199	7303138	T T	TAAAAA TAAAAA	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG00621.hp2 HG00642.hp1 others(16): Show HG00423.hp2 HG00621.hp2 HG00642.hp1 HG01109.hp2 HG02071.hp2 HG02080.hp2 HG02273.hp1 HG02300.hp2 HG02698.hp1 HG03491.hp2 HG03492.hp2 HG04184.hp1 HG06807.hp2 NA18956.hp1 NA18962.hp2 NA19000.hp1 NA19030.hp1 NA20300.hp2 NA20752.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0003 a0001c0001t0009 a0001c0001t0011 others(8): Show a0001c0001t0003 a0001c0001t0009 a0001c0001t0011 a0001c0001t0014 a0001c0001t0016 a0001c0001t0020 a0001c0001t0021 a0001c0001t0037 a0001c0001t0043 a0001c0001t0045 a0002c0002t0062	a0001c0001t0003g0064 a0001c0001t0003g0072 a0001c0001t0003g0105 others(16): Show a0001c0001t0003g0064 a0001c0001t0003g0072 a0001c0001t0003g0105 a0001c0001t0009g0240 a0001c0001t0009g0245 a0001c0001t0009g0247 a0001c0001t0009g0248 a0001c0001t0011g0068 a0001c0001t0014g0130 a0001c0001t0016g0071 a0001c0001t0016g0073 a0001c0001t0020g0079 a0001c0001t0021g0106 a0001c0001t0021g0107 a0001c0001t0021g0110 a0001c0001t0037g0246 a0001c0001t0043g0055 a0001c0001t0045g0074 a0002c0002t0062g0292	19	106	0.1792	5	c.280 others(20): Show c.280+407_280+411dupTTTTT	SSR1	ENSG00000124783.14	transcript	ENST00000244763.9	protein_coding	3/7			chr6	TogoVar
SSR2_chr1_156004048_156025951	156015535	A A	ATATAT ATATAT	intron_variant intron_variant	MODIFIER	NA18949.hp2 NA18982.hp2 NA19088.hp1 NA18949.hp2 NA18982.hp2 NA19088.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0008 a0001c0001t0001g0013 a0001c0001t0001g0076 a0001c0001t0001g0008 a0001c0001t0001g0013 a0001c0001t0001g0076	3	225	0.0133	5	c.255 others(20): Show c.255-467_255-466insATATA	SSR2	ENSG00000163479.14	transcript	ENST00000295702.9	protein_coding	3/5			chr1	TogoVar
SSR2_chr1_156004048_156025951	156017739	G G	GTTTTT GTTTTT	intron_variant intron_variant	MODIFIER	HG01934.hp1 HG02486.hp1 HG02630.hp2 others(3): Show HG01934.hp1 HG02486.hp1 HG02630.hp2 HG03654.hp1 HG04228.hp2 NA18985.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0026 a0001c0001t0001g0047 a0001c0001t0001g0071 others(2): Show a0001c0001t0001g0026 a0001c0001t0001g0047 a0001c0001t0001g0071 a0001c0001t0001g0073 a0001c0001t0001g0079	6	40	0.1500	5	c.254 others(20): Show c.254+526_254+530dupAAAAA	SSR2	ENSG00000163479.14	transcript	ENST00000295702.9	protein_coding	3/5			chr1	TogoVar
SSR3_chr3_156534553_156560117	156545733	G G	GACATT GACATT	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00280.hp1 HG00280.hp2 others(75): Show HG00099.hp2 HG00280.hp1 HG00280.hp2 HG00438.hp2 HG00597.hp1 HG00621.hp2 HG01109.hp1 HG01243.hp1 HG01433.hp2 HG01515.hp1 HG01516.hp1 HG01517.hp1 HG01891.hp1 HG01943.hp2 HG01952.hp1 HG01978.hp2 HG01993.hp1 HG02055.hp2 HG02074.hp1 HG02083.hp1 HG02109.hp2 HG02132.hp2 HG02135.hp2 HG02148.hp1 HG02165.hp2 HG02523.hp2 HG02602.hp1 HG02630.hp2 HG02698.hp2 HG02970.hp2 HG02976.hp1 HG03139.hp1 HG03486.hp2 HG03490.hp1 HG03491.hp1 HG03710.hp1 HG03831.hp1 HG03927.hp2 HG03942.hp2 HG04199.hp2 HG06807.hp1 NA18940.hp2 NA18941.hp2 NA18945.hp2 NA18948.hp1 NA18952.hp2 NA18959.hp2 NA18962.hp1 NA18965.hp1 NA18966.hp2 NA18967.hp1 NA18971.hp1 NA18973.hp2 NA18977.hp1 NA18978.hp1 NA18979.hp2 NA18980.hp1 NA18981.hp2 NA18984.hp2 NA18987.hp1 NA18989.hp2 NA18998.hp2 NA19001.hp1 NA19001.hp2 NA19006.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19054.hp1 NA19059.hp2 NA19060.hp2 NA19063.hp2 NA19064.hp2 NA19065.hp1 NA19067.hp1 NA19070.hp1 NA19074.hp2 NA20905.hp2	a0001 a0001	a0001c0002 a0001c0004 a0001c0002 a0001c0004	a0001c0002t0002 a0001c0002t0008 a0001c0002t0009 others(9): Show a0001c0002t0002 a0001c0002t0008 a0001c0002t0009 a0001c0002t0020 a0001c0002t0026 a0001c0002t0035 a0001c0002t0036 a0001c0002t0037 a0001c0002t0039 a0001c0004t0025 a0001c0004t0030 a0001c0004t0032	a0001c0002t0002g0002 a0001c0002t0002g0013 a0001c0002t0002g0048 others(19): Show a0001c0002t0002g0002 a0001c0002t0002g0013 a0001c0002t0002g0048 a0001c0002t0002g0114 a0001c0002t0002g0115 a0001c0002t0002g0122 a0001c0002t0008g0012 a0001c0002t0008g0113 a0001c0002t0008g0116 a0001c0002t0008g0119 a0001c0002t0008g0123 a0001c0002t0009g0009 a0001c0002t0009g0118 a0001c0002t0020g0026 a0001c0002t0026g0049 a0001c0002t0035g0120 a0001c0002t0036g0121 a0001c0002t0037g0117 a0001c0002t0039g0067 a0001c0004t0025g0037 a0001c0004t0030g0066 a0001c0004t0032g0124	78	398	0.1960	5	c.360 others(22): Show c.360-1299_360-1295dupAATGT	SSR3	ENSG00000114850.7	transcript	ENST00000265044.7	protein_coding	3/4			chr3	TogoVar
SSR3_chr3_156534553_156560117	156558718	A A	AAAAAC AAAAAC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00280.hp2 HG02486.hp1 HG02647.hp1 others(10): Show HG00280.hp2 HG02486.hp1 HG02647.hp1 HG02647.hp2 HG02717.hp2 HG02809.hp1 HG02922.hp2 HG02976.hp1 HG03453.hp1 HG03453.hp2 HG03831.hp1 NA19030.hp2 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0004 a0001c0001 a0001c0002 a0001c0004	a0001c0001t0012 a0001c0001t0034 a0001c0001t0043 others(4): Show a0001c0001t0012 a0001c0001t0034 a0001c0001t0043 a0001c0001t0045 a0001c0002t0008 a0001c0002t0039 a0001c0004t0032	a0001c0001t0012g0014 a0001c0001t0012g0051 a0001c0001t0034g0068 others(5): Show a0001c0001t0012g0014 a0001c0001t0012g0051 a0001c0001t0034g0068 a0001c0001t0043g0101 a0001c0001t0045g0072 a0001c0002t0008g0113 a0001c0002t0039g0067 a0001c0004t0032g0124	13	368	0.0353	5	c.-36 others(16): Show c.-3630_-3629insGTTTT	SSR3	ENSG00000114850.7	transcript	ENST00000265044.7	protein_coding		3602		chr3	TogoVar
SSTR2_chr17_73160010_73181633	73160283	C C	CTTTTT CTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp1 HG00733.hp1 HG00733.hp2 others(18): Show HG00099.hp1 HG00733.hp1 HG00733.hp2 HG01069.hp2 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01167.hp2 HG01169.hp2 HG01261.hp2 HG01952.hp2 HG02109.hp1 HG02148.hp2 HG02970.hp1 HG02976.hp2 HG03017.hp1 HG03098.hp2 HG03225.hp1 HG03471.hp2 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0015 a0001c0001t0016 others(12): Show a0001c0001t0011 a0001c0001t0015 a0001c0001t0016 a0001c0001t0054 a0001c0001t0055 a0001c0001t0056 a0001c0001t0057 a0001c0001t0058 a0001c0001t0059 a0001c0001t0060 a0001c0001t0136 a0001c0001t0139 a0001c0001t0140 a0001c0001t0141 a0001c0001t0142	a0001c0001t0011g0005 a0001c0001t0015g0005 a0001c0001t0016g0042 others(12): Show a0001c0001t0011g0005 a0001c0001t0015g0005 a0001c0001t0016g0042 a0001c0001t0054g0028 a0001c0001t0055g0031 a0001c0001t0056g0016 a0001c0001t0057g0016 a0001c0001t0058g0008 a0001c0001t0059g0008 a0001c0001t0060g0008 a0001c0001t0136g0028 a0001c0001t0139g0031 a0001c0001t0140g0030 a0001c0001t0141g0028 a0001c0001t0142g0008	21	119	0.1765	5	c.-50 others(16): Show c.-5098_-5097insTTTTT	SSTR2	ENSG00000180616.9	transcript	ENST00000357585.4	protein_coding		4726		chr17	TogoVar
SSTR2_chr17_73160010_73181633	73165295	G G	GTGTGT GTGTGT	splice_region_variant others(1): Show splice_region_variant intron_variant	LOW	HG00423.hp2 HG01175.hp2 HG01928.hp1 others(1): Show HG00423.hp2 HG01175.hp2 HG01928.hp1 NA18956.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0010 a0001c0001t0022 others(1): Show a0001c0001t0002 a0001c0001t0010 a0001c0001t0022 a0001c0001t0039	a0001c0001t0002g0131 a0001c0001t0010g0133 a0001c0001t0022g0132 others(1): Show a0001c0001t0002g0131 a0001c0001t0010g0133 a0001c0001t0022g0132 a0001c0001t0039g0134	4	263	0.0152	5	c.-93 others(16): Show c.-93+7_-93+8insTGTGT	SSTR2	ENSG00000180616.9	transcript	ENST00000357585.4	protein_coding	1/1			chr17	TogoVar
SSU72L2_chr11_4236641_4247706	4238580	C C	CTAAAA CTAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01891.hp1 HG02559.hp2 HG02647.hp2 others(5): Show HG01891.hp1 HG02559.hp2 HG02647.hp2 HG02818.hp1 HG02886.hp1 HG02896.hp1 HG03098.hp2 NA19043.hp2	a0004 a0010 a0004 a0010	a0004c0006 a0010c0014 a0004c0006 a0010c0014	a0004c0006t0006 a0004c0006t0022 a0010c0014t0006 a0004c0006t0006 a0004c0006t0022 a0010c0014t0006	a0004c0006t0006g0000 a0004c0006t0022g0000 a0010c0014t0006g0000 a0004c0006t0006g0000 a0004c0006t0022g0000 a0010c0014t0006g0000	8	29	0.2759	5	c.34 others(16): Show c.3475_*3476insTTTTA	SSU72L2	ENSG00000284306.2	transcript	ENST00000640805.2	protein_coding		3060		chr11	TogoVar
SSU72L3_chr11_4324790_4335864	4331307	C C	CAAATA CAAATA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02080.hp2 HG02155.hp2 HG02486.hp2 others(4): Show HG02080.hp2 HG02155.hp2 HG02486.hp2 HG02615.hp2 NA18906.hp2 NA19007.hp2 NA20905.hp2	a0007 a0009 a0007 a0009	a0007c0007 a0009c0010 a0007c0007 a0009c0010	a0007c0007t0006 a0009c0010t0009 a0007c0007t0006 a0009c0010t0009	a0007c0007t0006g0000 a0009c0010t0009g0000 a0007c0007t0006g0000 a0009c0010t0009g0000	7	338	0.0207	5	c.85 others(14): Show c.858_*859insAAATA	SSU72L3	ENSG00000284546.2	transcript	ENST00000640302.2	protein_coding		444		chr11	TogoVar
SSU72L5_chr11_4228217_4239287	4238580	C C	CTAAAA CTAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01891.hp1 HG02559.hp2 HG02647.hp2 others(5): Show HG01891.hp1 HG02559.hp2 HG02647.hp2 HG02818.hp2 HG02886.hp2 HG02896.hp1 HG03098.hp1 NA19043.hp2	a0001 a0004 a0007 a0001 a0004 a0007	a0001c0008 a0004c0007 a0007c0010 a0001c0008 a0004c0007 a0007c0010	a0001c0008t0008 a0004c0007t0008 a0004c0007t0027 others(1): Show a0001c0008t0008 a0004c0007t0008 a0004c0007t0027 a0007c0010t0008	a0001c0008t0008g0000 a0004c0007t0008g0000 a0004c0007t0027g0000 others(1): Show a0001c0008t0008g0000 a0004c0007t0008g0000 a0004c0007t0027g0000 a0007c0010t0008g0000	8	28	0.2857	5	c.47 others(16): Show c.4708_*4709insTAAAA	SSU72L5	ENSG00000284018.2	transcript	ENST00000639584.2	protein_coding		4294		chr11	TogoVar
SSU72L6_chr7_124471317_124482664	124479034	A A	AAAAAG AAAAAG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02071.hp2 HG02074.hp1 HG02622.hp2 others(8): Show HG02071.hp2 HG02074.hp1 HG02622.hp2 HG02723.hp2 HG03654.hp2 HG04199.hp2 NA18953.hp2 NA19082.hp2 NA19084.hp2 NA19090.hp1 NA20905.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0000 a0002c0002t0001g0000	11	226	0.0487	5	c.20 others(16): Show c.2079_*2080insAAAAG	SSU72L6	ENSG00000230268.4	transcript	ENST00000473520.2	protein_coding		1371		chr7	TogoVar
SSU72_chr1_1536673_1579863	1558204	T T	TAAAAA TAAAAA	intron_variant intron_variant	MODIFIER	HG00408.hp2 HG00438.hp1 HG00544.hp1 others(73): Show HG00408.hp2 HG00438.hp1 HG00544.hp1 HG00558.hp2 HG00597.hp2 HG00621.hp2 HG00735.hp1 HG01069.hp1 HG01081.hp2 HG01099.hp1 HG01123.hp1 HG01167.hp2 HG01169.hp2 HG01358.hp2 HG01943.hp1 HG01952.hp1 HG01978.hp2 HG02015.hp2 HG02027.hp1 HG02083.hp1 HG02083.hp2 HG02132.hp2 HG02135.hp1 HG02148.hp2 HG02155.hp1 HG02165.hp1 HG02451.hp1 HG02451.hp2 HG02523.hp2 HG02602.hp2 HG02738.hp2 HG02922.hp2 HG02965.hp2 HG02976.hp1 HG02976.hp2 HG03098.hp2 HG03209.hp2 HG03239.hp2 HG03491.hp1 HG03516.hp2 HG03688.hp2 HG03831.hp2 HG04184.hp2 HG04204.hp1 NA18612.hp1 NA18906.hp1 NA18943.hp1 NA18946.hp1 NA18947.hp1 NA18954.hp2 NA18955.hp2 NA18962.hp2 NA18963.hp1 NA18964.hp1 NA18966.hp2 NA18967.hp2 NA18969.hp2 NA18970.hp1 NA18971.hp2 NA18975.hp1 NA18975.hp2 NA18983.hp1 NA18984.hp2 NA18999.hp1 NA19002.hp2 NA19005.hp2 NA19011.hp1 NA19063.hp1 NA19065.hp1 NA19066.hp1 NA19074.hp1 NA19079.hp1 NA19081.hp1 NA19085.hp2 NA19088.hp2 NA19091.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0003 a0001c0002t0006 a0001c0001t0001 a0001c0001t0003 a0001c0002t0006	a0001c0001t0001g0052 a0001c0001t0001g0089 a0001c0001t0001g0167 others(60): Show a0001c0001t0001g0052 a0001c0001t0001g0089 a0001c0001t0001g0167 a0001c0001t0001g0193 a0001c0001t0001g0196 a0001c0001t0001g0226 a0001c0001t0003g0002 a0001c0001t0003g0005 a0001c0001t0003g0006 a0001c0001t0003g0008 a0001c0001t0003g0018 a0001c0001t0003g0019 a0001c0001t0003g0030 a0001c0001t0003g0158 a0001c0001t0003g0159 a0001c0001t0003g0161 a0001c0001t0003g0162 a0001c0001t0003g0163 a0001c0001t0003g0164 a0001c0001t0003g0165 a0001c0001t0003g0166 a0001c0001t0003g0168 a0001c0001t0003g0169 a0001c0001t0003g0170 a0001c0001t0003g0171 a0001c0001t0003g0172 a0001c0001t0003g0173 a0001c0001t0003g0174 a0001c0001t0003g0175 a0001c0001t0003g0176 a0001c0001t0003g0178 a0001c0001t0003g0179 a0001c0001t0003g0180 a0001c0001t0003g0181 a0001c0001t0003g0182 a0001c0001t0003g0183 a0001c0001t0003g0184 a0001c0001t0003g0185 a0001c0001t0003g0186 a0001c0001t0003g0187 a0001c0001t0003g0188 a0001c0001t0003g0189 a0001c0001t0003g0190 a0001c0001t0003g0191 a0001c0001t0003g0194 a0001c0001t0003g0195 a0001c0001t0003g0197 a0001c0001t0003g0198 a0001c0001t0003g0199 a0001c0001t0003g0200 a0001c0001t0003g0211 a0001c0001t0003g0214 a0001c0001t0003g0215 a0001c0001t0003g0228 a0001c0001t0003g0230 a0001c0001t0003g0231 a0001c0001t0003g0239 a0001c0001t0003g0241 a0001c0001t0003g0242 a0001c0001t0003g0243 a0001c0001t0003g0244 a0001c0001t0003g0245 a0001c0002t0006g0192	76	154	0.4935	5	c.224 others(22): Show c.224+6564_224+6568dupTTTTT	SSU72	ENSG00000160075.12	transcript	ENST00000291386.4	protein_coding	2/4			chr1	TogoVar
SSU72_chr1_1536673_1579863	1573265	C C	CAAAAA CAAAAA	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG00642.hp1 HG01109.hp1 others(20): Show HG00423.hp2 HG00642.hp1 HG01109.hp1 HG01123.hp2 HG01192.hp1 HG01192.hp2 HG02559.hp2 HG02896.hp2 HG02897.hp2 HG02976.hp2 HG03209.hp1 HG03453.hp1 HG03471.hp2 HG03927.hp1 HG04115.hp2 HG04204.hp2 NA18906.hp2 NA18944.hp1 NA18956.hp2 NA18967.hp1 NA18984.hp2 NA18999.hp2 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0109 others(18): Show a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0111 a0001c0001t0001g0112 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0117 a0001c0001t0001g0129 a0001c0001t0001g0224 a0001c0001t0001g0225 a0001c0001t0001g0226 a0001c0001t0001g0227 a0001c0001t0001g0229 a0001c0001t0001g0233 a0001c0001t0001g0246 a0001c0001t0001g0247 a0001c0001t0003g0228	23	99	0.2323	5	c.80+ others(20): Show c.80+1208_80+1212dupTTTTT	SSU72	ENSG00000160075.12	transcript	ENST00000291386.4	protein_coding	1/4			chr1	TogoVar
SSX1_chrX_48250392_48272444	48256455	G G	GTTTTT GTTTTT	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG00544.hp2 HG01358.hp1 others(5): Show HG00323.hp2 HG00544.hp2 HG01358.hp1 HG01943.hp1 HG02074.hp1 NA19074.hp2 NA19075.hp1 NA19082.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0021 a0001c0002t0001g0048 a0001c0002t0001g0105 others(3): Show a0001c0002t0001g0021 a0001c0002t0001g0048 a0001c0002t0001g0105 a0001c0002t0001g0106 a0001c0002t0001g0112 a0001c0002t0001g0126	8	182	0.0440	5	c.-20 others(20): Show c.-20-746_-20-742dupTTTTT	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	1/7		INFO_REALIGN_3_PRIME	chrX	TogoVar
SSX1_chrX_48250392_48272444	48258976	G G	GTGTTT GTGTTT	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00323.hp1 others(117): Show HG00099.hp1 HG00099.hp2 HG00323.hp1 HG00423.hp2 HG00558.hp2 HG00609.hp1 HG00621.hp1 HG00738.hp1 HG01070.hp1 HG01071.hp1 HG01074.hp1 HG01109.hp1 HG01123.hp1 HG01168.hp1 HG01169.hp2 HG01192.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp2 HG01346.hp2 HG01433.hp1 HG01516.hp1 HG01517.hp1 HG01884.hp2 HG01891.hp2 HG01952.hp1 HG01975.hp1 HG01978.hp1 HG01993.hp1 HG02004.hp2 HG02015.hp1 HG02056.hp1 HG02071.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02258.hp1 HG02451.hp1 HG02486.hp1 HG02559.hp1 HG02572.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02683.hp2 HG02698.hp1 HG02809.hp2 HG02886.hp2 HG02970.hp2 HG03209.hp1 HG03239.hp1 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03540.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03927.hp2 HG03942.hp1 HG06807.hp1 NA18906.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18954.hp2 NA18959.hp1 NA18960.hp1 NA18963.hp2 NA18965.hp1 NA18966.hp1 NA18968.hp2 NA18969.hp2 NA18975.hp2 NA18977.hp1 NA18979.hp2 NA18980.hp1 NA18987.hp1 NA18990.hp1 NA18992.hp1 NA18995.hp1 NA18997.hp1 NA18998.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19007.hp1 NA19009.hp1 NA19010.hp2 NA19030.hp2 NA19043.hp1 NA19054.hp2 NA19055.hp1 NA19063.hp1 NA19064.hp2 NA19065.hp2 NA19070.hp1 NA19072.hp1 NA19074.hp1 NA19076.hp1 NA19077.hp1 NA19078.hp1 NA19085.hp1 NA19086.hp1 NA19087.hp1 NA19089.hp1 NA19090.hp2 NA19091.hp1 NA19240.hp1 NA20129.hp1 NA20129.hp2 NA20752.hp1 NA20905.hp1	a0001 a0002 a0004 others(1): Show a0001 a0002 a0004 a0006	a0001c0001 a0002c0003 a0004c0004 others(1): Show a0001c0001 a0002c0003 a0004c0004 a0006c0008	a0001c0001t0002 a0001c0001t0005 a0001c0001t0007 others(7): Show a0001c0001t0002 a0001c0001t0005 a0001c0001t0007 a0001c0001t0010 a0001c0001t0011 a0001c0001t0012 a0002c0003t0004 a0002c0003t0008 a0004c0004t0002 a0006c0008t0004	a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0007 others(52): Show a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0007 a0001c0001t0002g0015 a0001c0001t0002g0017 a0001c0001t0002g0024 a0001c0001t0002g0025 a0001c0001t0002g0026 a0001c0001t0002g0037 a0001c0001t0002g0038 a0001c0001t0002g0043 a0001c0001t0002g0044 a0001c0001t0002g0045 a0001c0001t0002g0049 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0001t0002g0060 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0064 a0001c0001t0002g0065 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0069 a0001c0001t0002g0070 a0001c0001t0002g0071 a0001c0001t0002g0072 a0001c0001t0002g0073 a0001c0001t0002g0118 a0001c0001t0002g0129 a0001c0001t0005g0002 a0001c0001t0005g0007 a0001c0001t0005g0011 a0001c0001t0005g0059 a0001c0001t0005g0115 a0001c0001t0005g0116 a0001c0001t0007g0004 a0001c0001t0010g0117 a0001c0001t0011g0038 a0001c0001t0012g0068 a0002c0003t0004g0016 a0002c0003t0004g0022 a0002c0003t0004g0023 a0002c0003t0004g0042 a0002c0003t0004g0051 a0002c0003t0004g0052 a0002c0003t0004g0053 a0002c0003t0004g0054 a0002c0003t0008g0016 a0002c0003t0008g0055 a0004c0004t0002g0002 a0004c0004t0002g0017 a0006c0008t0004g0016	120	337	0.3561	5	c.280 others(20): Show c.280+356_280+360dupTGTTT	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	4/7		INFO_REALIGN_3_PRIME	chrX	TogoVar
SSX2IP_chr1_84638706_84695461	84676719	C C	CTTTTT CTTTTT	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00438.hp2 HG00639.hp2 others(64): Show HG00280.hp1 HG00438.hp2 HG00639.hp2 HG00733.hp1 HG01071.hp2 HG01074.hp1 HG01106.hp1 HG01168.hp1 HG01255.hp2 HG01358.hp2 HG01516.hp1 HG01517.hp1 HG01891.hp1 HG01934.hp1 HG01934.hp2 HG01943.hp2 HG01952.hp1 HG01975.hp2 HG01981.hp1 HG02004.hp1 HG02055.hp2 HG02109.hp2 HG02148.hp1 HG02148.hp2 HG02165.hp2 HG02280.hp1 HG02280.hp2 HG02300.hp1 HG02451.hp2 HG02572.hp2 HG02622.hp2 HG02630.hp1 HG02723.hp1 HG02723.hp2 HG02738.hp2 HG02809.hp1 HG02886.hp1 HG02922.hp1 HG02970.hp2 HG02976.hp2 HG03041.hp1 HG03139.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03453.hp2 HG03471.hp2 HG03486.hp2 HG03492.hp1 HG03654.hp2 HG04115.hp2 HG04199.hp1 HG04228.hp2 HG06807.hp2 NA18522.hp1 NA18747.hp2 NA18970.hp1 NA18975.hp1 NA18980.hp2 NA18981.hp1 NA18985.hp2 NA19000.hp1 NA19030.hp1 NA19030.hp2 NA19058.hp2 NA19082.hp1 NA21309.hp1	a0001 a0002 a0001 a0002	a0001c0002 a0001c0003 a0002c0001 a0001c0002 a0001c0003 a0002c0001	a0001c0002t0001 a0001c0002t0002 a0001c0002t0010 others(7): Show a0001c0002t0001 a0001c0002t0002 a0001c0002t0010 a0001c0003t0003 a0001c0003t0004 a0001c0003t0007 a0001c0003t0019 a0002c0001t0001 a0002c0001t0008 a0002c0001t0020	a0001c0002t0001g0178 a0001c0002t0002g0161 a0001c0002t0002g0162 others(46): Show a0001c0002t0001g0178 a0001c0002t0002g0161 a0001c0002t0002g0162 a0001c0002t0010g0016 a0001c0003t0003g0001 a0001c0003t0003g0004 a0001c0003t0003g0015 a0001c0003t0003g0129 a0001c0003t0003g0132 a0001c0003t0003g0134 a0001c0003t0003g0139 a0001c0003t0003g0141 a0001c0003t0003g0152 a0001c0003t0003g0155 a0001c0003t0003g0156 a0001c0003t0003g0157 a0001c0003t0003g0158 a0001c0003t0003g0159 a0001c0003t0003g0160 a0001c0003t0003g0163 a0001c0003t0003g0164 a0001c0003t0003g0169 a0001c0003t0003g0170 a0001c0003t0003g0171 a0001c0003t0003g0176 a0001c0003t0003g0177 a0001c0003t0004g0154 a0001c0003t0007g0135 a0001c0003t0007g0136 a0001c0003t0007g0137 a0001c0003t0019g0151 a0002c0001t0001g0014 a0002c0001t0001g0033 a0002c0001t0001g0053 a0002c0001t0001g0059 a0002c0001t0001g0060 a0002c0001t0001g0093 a0002c0001t0001g0099 a0002c0001t0001g0102 a0002c0001t0001g0103 a0002c0001t0001g0147 a0002c0001t0001g0148 a0002c0001t0001g0149 a0002c0001t0001g0150 a0002c0001t0001g0168 a0002c0001t0001g0174 a0002c0001t0001g0243 a0002c0001t0008g0153 a0002c0001t0020g0047	67	80	0.8375	5	c.-89 others(22): Show c.-89-5416_-89-5412dupAAAAA	SSX2IP	ENSG00000117155.17	transcript	ENST00000342203.8	protein_coding	1/13			chr1	TogoVar
SSX2_chrX_52691896_52712178	52697090	G G	GTGTGT GTGTGT	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02040.hp1 NA18906.hp2 HG02040.hp1 NA18906.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0004 a0001c0001 a0003c0004	a0001c0001t0008 a0003c0004t0008 a0001c0001t0008 a0003c0004t0008	a0001c0001t0008g0041 a0003c0004t0008g0015 a0001c0001t0008g0041 a0003c0004t0008g0015	2	97	0.0206	5	c.43 others(14): Show c.432_*433insACACA	SSX2	ENSG00000241476.9	transcript	ENST00000337502.6	protein_coding	8/8	897		chrX	TogoVar
SSX4B_chrX_48397082_48416960	48413935	A A	AGAAGG AGAAGG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00408.hp1 HG03041.hp2 HG04115.hp1 HG00408.hp1 HG03041.hp2 HG04115.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0019 a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0019	3	127	0.0236	5	c.-20 others(16): Show c.-2095_-2094insCCTTC	SSX4B	ENSG00000269791.6	transcript	ENST00000595235.6	protein_coding		1976		chrX	TogoVar
SSX4B_chrX_48397082_48416960	48414016	A A	AGGAAG AGGAAG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01891.hp1 HG02615.hp1 HG02922.hp1 others(1): Show HG01891.hp1 HG02615.hp1 HG02922.hp1 HG03688.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0019 a0001c0001t0001g0055 a0001c0001t0001g0056 others(1): Show a0001c0001t0001g0019 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0067	4	124	0.0323	5	c.-21 others(16): Show c.-2176_-2175insCTTCC	SSX4B	ENSG00000269791.6	transcript	ENST00000595235.6	protein_coding		2057		chrX	TogoVar
SSX4_chrX_48378539_48398347	48381415	T T	TTTCCC TTTCCC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01258.hp1 HG01884.hp1 HG01978.hp2 others(20): Show HG01258.hp1 HG01884.hp1 HG01978.hp2 HG01981.hp2 HG02040.hp1 HG02080.hp1 HG02083.hp1 HG02129.hp1 HG02132.hp1 HG02145.hp1 HG02165.hp1 HG02165.hp2 HG02486.hp2 HG02615.hp2 HG02630.hp1 HG02683.hp1 HG02735.hp1 HG02809.hp2 HG02922.hp1 HG03139.hp1 HG03225.hp1 NA18966.hp1 NA18999.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0008 others(7): Show a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0008 a0001c0001t0001g0010 a0001c0001t0001g0013 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0035 a0001c0001t0001g0037 a0001c0001t0001g0039	23	98	0.2347	5	c.-21 others(16): Show c.-2170_-2169insTTCCC	SSX4	ENSG00000268009.6	transcript	ENST00000595689.3	protein_coding		2123		chrX	TogoVar
SSX4_chrX_48378539_48398347	48381425	C C	CTTCCT CTTCCT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01069.hp1 NA19088.hp1 HG01069.hp1 NA19088.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0001 a0001c0001t0001g0005	2	102	0.0196	5	c.-21 others(16): Show c.-2160_-2159insTTCCT	SSX4	ENSG00000268009.6	transcript	ENST00000595689.3	protein_coding		2113		chrX	TogoVar

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