Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
BPI_chr20_38299156_38342505	38321837	T T	TACACAC TACACAC	intron_variant intron_variant	MODIFIER	HG00558.hp2 HG00733.hp1 HG00735.hp1 others(17): Show HG00558.hp2 HG00733.hp1 HG00735.hp1 HG01192.hp2 HG01515.hp1 HG01517.hp1 HG01934.hp1 HG02027.hp1 HG02074.hp1 HG02683.hp2 HG02698.hp1 HG03239.hp2 HG03490.hp1 HG03491.hp2 HG04204.hp1 NA18747.hp2 NA18941.hp1 NA18950.hp2 NA19002.hp1 NA19076.hp1	a0007 a0025 a0037 a0007 a0025 a0037	a0007c0007 a0025c0029 a0037c0053 a0007c0007 a0025c0029 a0037c0053	a0007c0007t0001 a0007c0007t0002 a0025c0029t0002 others(1): Show a0007c0007t0001 a0007c0007t0002 a0025c0029t0002 a0037c0053t0001	a0007c0007t0001g0035 a0007c0007t0001g0207 a0007c0007t0001g0208 others(13): Show a0007c0007t0001g0035 a0007c0007t0001g0207 a0007c0007t0001g0208 a0007c0007t0001g0210 a0007c0007t0001g0215 a0007c0007t0001g0290 a0007c0007t0002g0010 a0007c0007t0002g0026 a0007c0007t0002g0034 a0007c0007t0002g0205 a0007c0007t0002g0206 a0007c0007t0002g0212 a0007c0007t0002g0213 a0025c0029t0002g0010 a0025c0029t0002g0133 a0037c0053t0001g0209	20	426	0.0470	6	c.756 others(23): Show c.756+1577_756+1582dupCACACA	BPI	ENSG00000101425.14	transcript	ENST00000642449.2	protein_coding	7/14		INFO_REALIGN_3_PRIME	chr20	TogoVar
BPI_chr20_38299156_38342505	38339638	G G	GAAAAAA GAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00423.hp1 HG00438.hp2 HG00639.hp1 others(29): Show HG00423.hp1 HG00438.hp2 HG00639.hp1 HG00673.hp2 HG01993.hp2 HG02040.hp2 HG02818.hp2 HG03669.hp1 HG03710.hp2 HG03927.hp2 HG06807.hp2 NA18942.hp2 NA18945.hp2 NA18950.hp1 NA18951.hp1 NA18951.hp2 NA18955.hp1 NA18960.hp2 NA18962.hp2 NA18966.hp1 NA18969.hp2 NA18980.hp1 NA18984.hp1 NA18986.hp1 NA19005.hp1 NA19009.hp2 NA19011.hp1 NA19064.hp2 NA19067.hp2 NA19085.hp2 NA19087.hp2 NA20905.hp2	a0002 a0003 a0008 others(7): Show a0002 a0003 a0008 a0009 a0011 a0013 a0014 a0015 a0021 a0035	a0002c0002 a0003c0003 a0008c0008 others(8): Show a0002c0002 a0003c0003 a0008c0008 a0009c0009 a0009c0041 a0011c0013 a0013c0014 a0014c0016 a0015c0015 a0021c0036 a0035c0044	a0002c0002t0001 a0002c0002t0003 a0003c0003t0001 others(9): Show a0002c0002t0001 a0002c0002t0003 a0003c0003t0001 a0008c0008t0001 a0009c0009t0001 a0009c0041t0001 a0011c0013t0001 a0013c0014t0001 a0014c0016t0001 a0015c0015t0001 a0021c0036t0001 a0035c0044t0001	a0002c0002t0001g0170 a0002c0002t0003g0177 a0003c0003t0001g0005 others(25): Show a0002c0002t0001g0170 a0002c0002t0003g0177 a0003c0003t0001g0005 a0003c0003t0001g0011 a0003c0003t0001g0012 a0003c0003t0001g0042 a0003c0003t0001g0043 a0003c0003t0001g0220 a0003c0003t0001g0273 a0003c0003t0001g0274 a0003c0003t0001g0295 a0003c0003t0001g0344 a0008c0008t0001g0029 a0008c0008t0001g0148 a0008c0008t0001g0229 a0009c0009t0001g0023 a0009c0009t0001g0058 a0009c0009t0001g0059 a0009c0009t0001g0091 a0009c0009t0001g0235 a0009c0041t0001g0078 a0011c0013t0001g0187 a0013c0014t0001g0147 a0014c0016t0001g0276 a0015c0015t0001g0286 a0015c0015t0001g0306 a0021c0036t0001g0227 a0035c0044t0001g0285	32	426	0.0751	6	c.24 others(17): Show c.2454_*2455insAAAAAA	BPI	ENSG00000101425.14	transcript	ENST00000642449.2	protein_coding		2134		chr20	TogoVar
BPNT1_chr1_220052482_220094788	220057034	A A	AACACAC AACACAC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01891.hp2 NA18612.hp1 NA18951.hp1 others(2): Show HG01891.hp2 NA18612.hp1 NA18951.hp1 NA19005.hp1 NA19009.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0198 a0001c0001t0004g0247 a0001c0001t0004g0252 others(2): Show a0001c0001t0004g0198 a0001c0001t0004g0247 a0001c0001t0004g0252 a0001c0001t0004g0316 a0001c0001t0004g0317	5	424	0.0118	6	c.18 others(17): Show c.1809_*1810insGTGTGT	BPNT1	ENSG00000162813.18	transcript	ENST00000322067.12	protein_coding		447		chr1	TogoVar
BPNT1_chr1_220052482_220094788	220076701	T T	TTAATAA TTAATAA	intron_variant intron_variant	MODIFIER	HG00408.hp2 HG00423.hp2 HG00597.hp1 others(28): Show HG00408.hp2 HG00423.hp2 HG00597.hp1 HG00609.hp1 HG00621.hp1 HG01433.hp2 HG01891.hp2 HG01975.hp1 HG02015.hp1 HG02135.hp2 HG02165.hp2 HG02258.hp2 HG02622.hp1 HG02886.hp2 HG03654.hp2 NA18522.hp2 NA18612.hp1 NA18940.hp1 NA18951.hp1 NA18960.hp2 NA18965.hp1 NA18966.hp2 NA18980.hp2 NA18985.hp1 NA19002.hp2 NA19005.hp1 NA19009.hp1 NA19060.hp2 NA19075.hp2 NA19080.hp1 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0001 a0001c0001t0004	a0001c0001t0001g0201 a0001c0001t0001g0202 a0001c0001t0001g0203 others(26): Show a0001c0001t0001g0201 a0001c0001t0001g0202 a0001c0001t0001g0203 a0001c0001t0001g0241 a0001c0001t0001g0242 a0001c0001t0001g0244 a0001c0001t0001g0342 a0001c0001t0004g0004 a0001c0001t0004g0079 a0001c0001t0004g0198 a0001c0001t0004g0199 a0001c0001t0004g0245 a0001c0001t0004g0246 a0001c0001t0004g0247 a0001c0001t0004g0248 a0001c0001t0004g0249 a0001c0001t0004g0250 a0001c0001t0004g0252 a0001c0001t0004g0253 a0001c0001t0004g0254 a0001c0001t0004g0255 a0001c0001t0004g0256 a0001c0001t0004g0258 a0001c0001t0004g0315 a0001c0001t0004g0316 a0001c0001t0004g0317 a0001c0001t0004g0318 a0001c0001t0004g0319 a0001c0001t0004g0320	31	424	0.0731	6	c.121 others(23): Show c.121-2636_121-2631dupTTATTA	BPNT1	ENSG00000162813.18	transcript	ENST00000322067.12	protein_coding	2/8			chr1	TogoVar
BPNT1_chr1_220052482_220094788	220082063	A A	AATATAT AATATAT	intron_variant intron_variant	MODIFIER	HG01074.hp1 HG01123.hp1 HG03491.hp1 others(5): Show HG01074.hp1 HG01123.hp1 HG03491.hp1 HG03492.hp2 NA19067.hp2 NA19087.hp1 NA20300.hp2 NA20805.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0034 a0001c0001t0001g0037 a0001c0001t0001g0038 others(5): Show a0001c0001t0001g0034 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0046 a0001c0001t0001g0057	8	424	0.0189	6	c.-8- others(21): Show c.-8-2215_-8-2210dupATATAT	BPNT1	ENSG00000162813.18	transcript	ENST00000322067.12	protein_coding	1/8			chr1	TogoVar
BPNT1_chr1_220052482_220094788	220082085	T T	TATATAG TATATAG	intron_variant intron_variant	MODIFIER	HG01884.hp1 NA18954.hp2 NA18993.hp2 HG01884.hp1 NA18954.hp2 NA18993.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0005 a0001c0001t0001 a0001c0001t0005	a0001c0001t0001g0036 a0001c0001t0001g0197 a0001c0001t0005g0026 a0001c0001t0001g0036 a0001c0001t0001g0197 a0001c0001t0005g0026	3	424	0.0071	6	c.-8- others(21): Show c.-8-2232_-8-2231insCTATAT	BPNT1	ENSG00000162813.18	transcript	ENST00000322067.12	protein_coding	1/8			chr1	TogoVar
BPNT1_chr1_220052482_220094788	220088806	G G	GAAAAGA GAAAAGA	intron_variant intron_variant	MODIFIER	HG00558.hp2 HG03927.hp2 HG04184.hp2 others(5): Show HG00558.hp2 HG03927.hp2 HG04184.hp2 NA18942.hp1 NA18973.hp2 NA19012.hp2 NA19065.hp1 NA19084.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0010 a0001c0001t0001g0047 a0001c0001t0001g0048 others(4): Show a0001c0001t0001g0010 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0001t0001g0058 a0001c0001t0001g0059	8	424	0.0189	6	c.-9+ others(19): Show c.-9+879_-9+880insTCTTTT	BPNT1	ENSG00000162813.18	transcript	ENST00000322067.12	protein_coding	1/8			chr1	TogoVar
BPNT1_chr1_220052482_220094788	220090911	C C	CATATAT CATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00738.hp1 HG01081.hp2 HG01175.hp2 others(17): Show HG00738.hp1 HG01081.hp2 HG01175.hp2 HG01433.hp2 HG01891.hp1 HG01978.hp1 HG01981.hp1 HG02004.hp1 HG02258.hp2 HG02630.hp1 HG02735.hp1 HG02970.hp2 HG03041.hp2 HG03130.hp2 NA18950.hp1 NA18950.hp2 NA18974.hp2 NA18990.hp1 NA19009.hp2 NA19043.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0006 a0001c0001t0007 a0001c0001t0009 a0002c0003t0003	a0001c0001t0001g0156 a0001c0001t0001g0162 a0001c0001t0001g0164 others(17): Show a0001c0001t0001g0156 a0001c0001t0001g0162 a0001c0001t0001g0164 a0001c0001t0001g0218 a0001c0001t0001g0226 a0001c0001t0001g0242 a0001c0001t0001g0244 a0001c0001t0001g0299 a0001c0001t0002g0099 a0001c0001t0003g0012 a0001c0001t0003g0144 a0001c0001t0003g0154 a0001c0001t0003g0206 a0001c0001t0003g0238 a0001c0001t0006g0383 a0001c0001t0006g0385 a0001c0001t0007g0095 a0001c0001t0007g0220 a0001c0001t0009g0207 a0002c0003t0003g0224	20	424	0.0472	6	c.-12 others(17): Show c.-1235_-1234insATATAT	BPNT1	ENSG00000162813.18	transcript	ENST00000322067.12	protein_coding		1124		chr1	TogoVar
BPNT1_chr1_220052482_220094788	220090949	T T	TACACAC TACACAC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00639.hp2 HG01074.hp1 HG01123.hp1 others(4): Show HG00639.hp2 HG01074.hp1 HG01123.hp1 HG01258.hp1 HG03654.hp1 NA19067.hp2 NA20805.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0034 a0001c0001t0001g0038 a0001c0001t0001g0040 others(4): Show a0001c0001t0001g0034 a0001c0001t0001g0038 a0001c0001t0001g0040 a0001c0001t0001g0043 a0001c0001t0001g0045 a0001c0001t0001g0056 a0001c0001t0001g0057	7	424	0.0165	6	c.-12 others(17): Show c.-1273_-1272insGTGTGT	BPNT1	ENSG00000162813.18	transcript	ENST00000322067.12	protein_coding		1162		chr1	TogoVar
BPNT1_chr1_220052482_220094788	220090949	T T	TATACAC TATACAC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02809.hp1 HG03540.hp1 HG03579.hp1 others(3): Show HG02809.hp1 HG03540.hp1 HG03579.hp1 NA18940.hp1 NA18965.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 a0001c0001t0001 a0001c0001t0004 a0001c0001t0005	a0001c0001t0001g0260 a0001c0001t0004g0200 a0001c0001t0004g0249 others(3): Show a0001c0001t0001g0260 a0001c0001t0004g0200 a0001c0001t0004g0249 a0001c0001t0004g0319 a0001c0001t0005g0007 a0001c0001t0005g0027	6	424	0.0142	6	c.-12 others(17): Show c.-1273_-1272insGTGTAT	BPNT1	ENSG00000162813.18	transcript	ENST00000322067.12	protein_coding		1162		chr1	TogoVar
BPNT1_chr1_220052482_220094788	220090949	T T	TATATAC TATATAC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02273.hp1 HG02970.hp1 HG03225.hp1 HG02273.hp1 HG02970.hp1 HG03225.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0021 a0001c0001t0001 a0001c0001t0002 a0001c0001t0021	a0001c0001t0001g0151 a0001c0001t0002g0279 a0001c0001t0021g0386 a0001c0001t0001g0151 a0001c0001t0002g0279 a0001c0001t0021g0386	3	424	0.0071	6	c.-12 others(17): Show c.-1273_-1272insGTATAT	BPNT1	ENSG00000162813.18	transcript	ENST00000322067.12	protein_coding		1162		chr1	TogoVar
BPNT2_chr8_56952931_56998867	56974385	T T	TTCAAAC TTCAAAC	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00408.hp1 HG00408.hp2 others(121): Show HG00323.hp1 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00438.hp1 HG00597.hp1 HG00609.hp2 HG00673.hp1 HG00741.hp2 HG01069.hp1 HG01070.hp1 HG01071.hp1 HG01074.hp1 HG01074.hp2 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01175.hp1 HG01255.hp2 HG01358.hp1 HG01433.hp2 HG01516.hp2 HG01975.hp2 HG01978.hp2 HG01981.hp1 HG02015.hp2 HG02056.hp1 HG02074.hp2 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp2 HG02132.hp2 HG02135.hp2 HG02145.hp2 HG02148.hp2 HG02155.hp2 HG02258.hp1 HG02293.hp1 HG02451.hp2 HG02523.hp1 HG02523.hp2 HG02615.hp1 HG02622.hp2 HG02698.hp1 HG02723.hp2 HG02735.hp2 HG02886.hp1 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03225.hp2 HG03239.hp2 HG03490.hp1 HG03654.hp2 HG03688.hp1 HG03710.hp2 HG03927.hp1 HG03942.hp1 HG04228.hp1 HG04228.hp2 NA18747.hp1 NA18747.hp2 NA18939.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18945.hp1 NA18945.hp2 NA18946.hp1 NA18947.hp2 NA18948.hp2 NA18949.hp1 NA18949.hp2 NA18950.hp1 NA18953.hp1 NA18955.hp1 NA18955.hp2 NA18956.hp2 NA18957.hp1 NA18959.hp2 NA18960.hp2 NA18962.hp1 NA18964.hp1 NA18965.hp2 NA18967.hp2 NA18969.hp2 NA18970.hp1 NA18972.hp2 NA18975.hp2 NA18977.hp1 NA18979.hp2 NA18980.hp2 NA18982.hp2 NA18984.hp2 NA18985.hp2 NA18986.hp2 NA18988.hp1 NA18991.hp2 NA18992.hp2 NA18997.hp1 NA19001.hp2 NA19002.hp1 NA19003.hp1 NA19004.hp1 NA19005.hp1 NA19006.hp1 NA19009.hp1 NA19012.hp1 NA19030.hp2 NA19055.hp2 NA19056.hp1 NA19056.hp2 NA19063.hp1 NA19068.hp1 NA19080.hp1 NA19081.hp2 NA19082.hp1 NA19083.hp2 NA19086.hp2 NA19088.hp2 NA20129.hp2 NA20905.hp1	a0001 a0003 a0004 others(1): Show a0001 a0003 a0004 a0005	a0001c0001 a0003c0006 a0004c0005 others(1): Show a0001c0001 a0003c0006 a0004c0005 a0005c0004	a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 others(11): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0013 a0001c0001t0016 a0001c0001t0019 a0001c0001t0029 a0001c0001t0030 a0001c0001t0034 a0001c0001t0035 a0001c0001t0036 a0003c0006t0003 a0004c0005t0002 a0005c0004t0013	a0001c0001t0002g0003 a0001c0001t0002g0013 a0001c0001t0002g0014 others(82): Show a0001c0001t0002g0003 a0001c0001t0002g0013 a0001c0001t0002g0014 a0001c0001t0002g0039 a0001c0001t0002g0040 a0001c0001t0002g0191 a0001c0001t0002g0192 a0001c0001t0002g0193 a0001c0001t0002g0194 a0001c0001t0002g0196 a0001c0001t0002g0200 a0001c0001t0002g0201 a0001c0001t0002g0202 a0001c0001t0002g0203 a0001c0001t0002g0205 a0001c0001t0002g0206 a0001c0001t0002g0207 a0001c0001t0002g0208 a0001c0001t0002g0209 a0001c0001t0002g0210 a0001c0001t0002g0212 a0001c0001t0002g0213 a0001c0001t0002g0214 a0001c0001t0002g0215 a0001c0001t0002g0216 a0001c0001t0002g0217 a0001c0001t0002g0218 a0001c0001t0002g0219 a0001c0001t0002g0220 a0001c0001t0002g0221 a0001c0001t0002g0222 a0001c0001t0002g0223 a0001c0001t0002g0224 a0001c0001t0002g0225 a0001c0001t0002g0226 a0001c0001t0002g0227 a0001c0001t0002g0228 a0001c0001t0002g0229 a0001c0001t0002g0230 a0001c0001t0003g0001 a0001c0001t0003g0006 a0001c0001t0003g0009 a0001c0001t0003g0015 a0001c0001t0003g0041 a0001c0001t0003g0231 a0001c0001t0003g0232 a0001c0001t0003g0233 a0001c0001t0003g0234 a0001c0001t0003g0235 a0001c0001t0003g0236 a0001c0001t0003g0237 a0001c0001t0003g0238 a0001c0001t0003g0239 a0001c0001t0003g0240 a0001c0001t0003g0241 a0001c0001t0003g0242 a0001c0001t0003g0243 a0001c0001t0003g0244 a0001c0001t0003g0245 a0001c0001t0003g0246 a0001c0001t0003g0247 a0001c0001t0003g0248 a0001c0001t0003g0249 a0001c0001t0003g0250 a0001c0001t0003g0252 a0001c0001t0003g0253 a0001c0001t0003g0254 a0001c0001t0003g0255 a0001c0001t0003g0258 a0001c0001t0005g0016 a0001c0001t0005g0042 a0001c0001t0005g0256 a0001c0001t0013g0204 a0001c0001t0013g0211 a0001c0001t0016g0190 a0001c0001t0016g0198 a0001c0001t0019g0178 a0001c0001t0029g0179 a0001c0001t0030g0188 a0001c0001t0034g0195 a0001c0001t0035g0197 a0001c0001t0036g0257 a0003c0006t0003g0251 a0004c0005t0002g0199 a0005c0004t0013g0189	124	356	0.3483	6	c.646 others(23): Show c.646+3664_646+3665insGTTTGA	BPNT2	ENSG00000104331.9	transcript	ENST00000262644.9	protein_coding	3/4			chr8	TogoVar
BPNT2_chr8_56952931_56998867	56980819	T T	TACACAC TACACAC	intron_variant intron_variant	MODIFIER	HG01167.hp2 HG02257.hp2 HG02258.hp2 others(11): Show HG01167.hp2 HG02257.hp2 HG02258.hp2 HG02647.hp1 HG02896.hp1 HG02897.hp2 HG03195.hp1 HG03195.hp2 HG03490.hp2 HG03492.hp1 HG03540.hp1 HG03540.hp2 HG03834.hp1 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0009 a0001c0001t0001 a0001c0001t0009	a0001c0001t0001g0037 a0001c0001t0001g0077 a0001c0001t0001g0092 others(8): Show a0001c0001t0001g0037 a0001c0001t0001g0077 a0001c0001t0001g0092 a0001c0001t0001g0099 a0001c0001t0001g0100 a0001c0001t0001g0101 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0162 a0001c0001t0009g0017 a0001c0001t0009g0018	14	356	0.0393	6	c.388 others(21): Show c.388-628_388-623dupGTGTGT	BPNT2	ENSG00000104331.9	transcript	ENST00000262644.9	protein_coding	1/4			chr8	TogoVar
BPNT2_chr8_56952931_56998867	56980819	T T	TATACAC TATACAC	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00423.hp1 NA19002.hp1 HG00408.hp1 HG00423.hp1 NA19002.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0200 a0001c0001t0002g0208 a0001c0001t0002g0213 a0001c0001t0002g0200 a0001c0001t0002g0208 a0001c0001t0002g0213	3	356	0.0084	6	c.388 others(21): Show c.388-623_388-622insGTGTAT	BPNT2	ENSG00000104331.9	transcript	ENST00000262644.9	protein_coding	1/4			chr8	TogoVar
BPTF_chr17_67820503_67989378	67917131	C C	CTTTTTT CTTTTTT	intron_variant intron_variant	MODIFIER	HG02015.hp1 HG02071.hp1 NA18950.hp1 others(3): Show HG02015.hp1 HG02071.hp1 NA18950.hp1 NA18966.hp2 NA18977.hp2 NA18993.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0185 a0002c0002t0002g0186 a0002c0002t0002g0187 others(3): Show a0002c0002t0002g0185 a0002c0002t0002g0186 a0002c0002t0002g0187 a0002c0002t0002g0191 a0002c0002t0002g0195 a0002c0002t0002g0271	6	274	0.0219	6	c.530 others(25): Show c.5304-1569_5304-1564dupTTTTTT	BPTF	ENSG00000171634.19	transcript	ENST00000306378.11	protein_coding	11/27		INFO_REALIGN_3_PRIME	chr17	TogoVar
BPTF_chr17_67820503_67989378	67919218	T T	TAATAAA TAATAAA	intron_variant intron_variant	MODIFIER	HG00438.hp1 NA18990.hp2 NA19012.hp2 HG00438.hp1 NA18990.hp2 NA19012.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0079 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0079	3	274	0.0110	6	c.542 others(23): Show c.5428+382_5428+383insTAAAAA	BPTF	ENSG00000171634.19	transcript	ENST00000306378.11	protein_coding	12/27		INFO_REALIGN_3_PRIME	chr17	TogoVar
BPTF_chr17_67820503_67989378	67950051	C C	CAAAAAA CAAAAAA	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG02717.hp1 HG02818.hp1 others(3): Show HG01891.hp1 HG02717.hp1 HG02818.hp1 HG02895.hp2 HG02896.hp2 HG03195.hp1	a0001 a0008 a0001 a0008	a0001c0005 a0008c0023 a0001c0005 a0008c0023	a0001c0005t0005 a0008c0023t0005 a0001c0005t0005 a0008c0023t0005	a0001c0005t0005g0099 a0001c0005t0005g0265 a0001c0005t0005g0266 others(3): Show a0001c0005t0005g0099 a0001c0005t0005g0265 a0001c0005t0005g0266 a0001c0005t0005g0268 a0001c0005t0005g0269 a0008c0023t0005g0264	6	274	0.0219	6	c.792 others(25): Show c.7926+1761_7926+1766dupAAAAAA	BPTF	ENSG00000171634.19	transcript	ENST00000306378.11	protein_coding	23/27		INFO_REALIGN_3_PRIME	chr17	TogoVar
BPTF_chr17_67820503_67989378	67976714	A A	AAATAAG AAATAAG	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG01361.hp2 HG01884.hp2 others(22): Show HG00438.hp2 HG01361.hp2 HG01884.hp2 HG02040.hp1 HG02055.hp1 HG02109.hp1 HG02109.hp2 HG02622.hp2 HG02965.hp2 NA18941.hp2 NA18950.hp1 NA18953.hp1 NA18954.hp2 NA18964.hp2 NA18972.hp1 NA18974.hp1 NA18977.hp2 NA18989.hp2 NA18990.hp1 NA19000.hp1 NA19030.hp1 NA19060.hp1 NA19067.hp2 NA19081.hp1 NA20752.hp2	a0001 a0002 a0004 others(2): Show a0001 a0002 a0004 a0005 a0006	a0001c0001 a0001c0003 a0002c0002 others(5): Show a0001c0001 a0001c0003 a0002c0002 a0002c0006 a0004c0007 a0004c0026 a0005c0008 a0006c0010	a0001c0001t0002 a0001c0003t0002 a0002c0002t0002 others(5): Show a0001c0001t0002 a0001c0003t0002 a0002c0002t0002 a0002c0006t0002 a0004c0007t0002 a0004c0026t0002 a0005c0008t0002 a0006c0010t0002	a0001c0001t0002g0056 a0001c0003t0002g0088 a0002c0002t0002g0015 others(22): Show a0001c0001t0002g0056 a0001c0003t0002g0088 a0002c0002t0002g0015 a0002c0002t0002g0183 a0002c0002t0002g0186 a0002c0002t0002g0188 a0002c0002t0002g0193 a0002c0002t0002g0195 a0002c0002t0002g0200 a0002c0002t0002g0243 a0002c0002t0002g0255 a0002c0002t0002g0256 a0002c0002t0002g0261 a0002c0002t0002g0272 a0002c0006t0002g0012 a0004c0007t0002g0073 a0004c0007t0002g0075 a0004c0007t0002g0078 a0004c0007t0002g0259 a0004c0026t0002g0072 a0005c0008t0002g0002 a0005c0008t0002g0101 a0005c0008t0002g0102 a0005c0008t0002g0103 a0006c0010t0002g0107	25	274	0.0912	6	c.872 others(23): Show c.8726+757_8726+758insATAAGA	BPTF	ENSG00000171634.19	transcript	ENST00000306378.11	protein_coding	27/27		INFO_REALIGN_3_PRIME	chr17	TogoVar
BPTF_chr17_67820503_67989378	67981866	A A	AACACAC AACACAC	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG00735.hp2 HG01069.hp1 others(51): Show HG00558.hp1 HG00735.hp2 HG01069.hp1 HG01070.hp1 HG01074.hp1 HG01099.hp1 HG01106.hp2 HG01169.hp1 HG01169.hp2 HG01361.hp2 HG01433.hp2 HG01884.hp2 HG01981.hp1 HG02015.hp2 HG02027.hp1 HG02148.hp2 HG02273.hp1 HG02735.hp1 HG02818.hp2 HG02965.hp2 HG03195.hp1 HG03209.hp1 HG03239.hp1 HG03490.hp1 HG03710.hp2 HG03831.hp2 HG04115.hp2 HG04184.hp2 HG04199.hp2 HG06807.hp1 NA18941.hp1 NA18941.hp2 NA18954.hp1 NA18954.hp2 NA18962.hp2 NA18966.hp2 NA18969.hp1 NA18971.hp1 NA18974.hp2 NA18980.hp1 NA18989.hp1 NA18998.hp2 NA19000.hp1 NA19011.hp1 NA19030.hp1 NA19043.hp1 NA19057.hp2 NA19065.hp2 NA19077.hp1 NA20129.hp2 NA20300.hp1 NA20752.hp1 NA20905.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0005 a0001 a0002 a0005	a0001c0001 a0001c0003 a0001c0005 others(8): Show a0001c0001 a0001c0003 a0001c0005 a0001c0020 a0001c0021 a0001c0024 a0001c0031 a0001c0032 a0002c0002 a0002c0006 a0005c0008	a0001c0001t0001 a0001c0001t0011 a0001c0003t0003 others(9): Show a0001c0001t0001 a0001c0001t0011 a0001c0003t0003 a0001c0005t0005 a0001c0020t0001 a0001c0021t0001 a0001c0024t0001 a0001c0031t0001 a0001c0032t0002 a0002c0002t0002 a0002c0006t0002 a0005c0008t0002	a0001c0001t0001g0041 a0001c0001t0001g0052 a0001c0001t0001g0060 others(51): Show a0001c0001t0001g0041 a0001c0001t0001g0052 a0001c0001t0001g0060 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0109 a0001c0001t0001g0111 a0001c0001t0001g0112 a0001c0001t0001g0113 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0117 a0001c0001t0001g0118 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0122 a0001c0001t0001g0124 a0001c0001t0001g0127 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0001g0138 a0001c0001t0001g0140 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0146 a0001c0001t0001g0153 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0159 a0001c0001t0001g0163 a0001c0001t0001g0164 a0001c0001t0011g0128 a0001c0003t0003g0094 a0001c0005t0005g0099 a0001c0020t0001g0258 a0001c0021t0001g0177 a0001c0024t0001g0139 a0001c0031t0001g0137 a0001c0032t0002g0007 a0002c0002t0002g0183 a0002c0002t0002g0187 a0002c0002t0002g0193 a0002c0002t0002g0210 a0002c0002t0002g0236 a0002c0002t0002g0272 a0002c0006t0002g0008 a0005c0008t0002g0002 a0005c0008t0002g0101 a0005c0008t0002g0102 a0005c0008t0002g0103	54	274	0.1971	6	c.872 others(23): Show c.8727-353_8727-348dupACACAC	BPTF	ENSG00000171634.19	transcript	ENST00000306378.11	protein_coding	27/27		INFO_REALIGN_3_PRIME	chr17	TogoVar
BPTF_chr17_67820503_67989378	67984630	C C	CTTTTTT CTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01169.hp1 HG01346.hp2 HG01361.hp1 others(7): Show HG01169.hp1 HG01346.hp2 HG01361.hp1 HG01433.hp1 HG02451.hp2 HG02698.hp2 HG03098.hp1 NA18522.hp2 NA19057.hp1 NA20805.hp1	a0001 a0002 a0012 a0001 a0002 a0012	a0001c0001 a0002c0002 a0012c0018 a0001c0001 a0002c0002 a0012c0018	a0001c0001t0001 a0002c0002t0002 a0012c0018t0002 a0001c0001t0001 a0002c0002t0002 a0012c0018t0002	a0001c0001t0001g0031 a0001c0001t0001g0048 a0001c0001t0001g0049 others(7): Show a0001c0001t0001g0031 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0001t0001g0051 a0002c0002t0002g0207 a0002c0002t0002g0209 a0002c0002t0002g0210 a0002c0002t0002g0250 a0012c0018t0002g0208	10	274	0.0365	6	c.23 others(17): Show c.2342_*2343insTTTTTT	BPTF	ENSG00000171634.19	transcript	ENST00000306378.11	protein_coding		253		chr17	TogoVar
BRAF_chr7_140714337_140929929	140732170	C C	CAAAAAA CAAAAAA	intron_variant intron_variant	MODIFIER	HG00558.hp2 HG00673.hp2 NA18959.hp2 others(2): Show HG00558.hp2 HG00673.hp2 NA18959.hp2 NA19001.hp2 NA19068.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0004 a0001c0002t0001g0005 a0001c0002t0001g0040 others(2): Show a0001c0002t0001g0004 a0001c0002t0001g0005 a0001c0002t0001g0040 a0001c0002t0001g0047 a0001c0002t0001g0051	5	190	0.0263	6	c.240 others(25): Show c.2401+2441_2401+2446dupTTTTTT	BRAF	ENSG00000157764.14	transcript	ENST00000644969.2	protein_coding	19/19			chr7	TogoVar
BRAF_chr7_140714337_140929929	140772272	T T	TACAACA TACAACA	intron_variant intron_variant	MODIFIER	HG01074.hp1 HG01884.hp1 HG01891.hp2 others(19): Show HG01074.hp1 HG01884.hp1 HG01891.hp2 HG02109.hp2 HG02257.hp2 HG02615.hp2 HG02622.hp2 HG02895.hp1 HG02896.hp2 HG02897.hp2 HG03209.hp1 HG03225.hp2 HG03579.hp1 HG04199.hp2 NA18906.hp1 NA18963.hp2 NA18986.hp2 NA19068.hp2 NA19084.hp1 NA19240.hp1 NA19240.hp2 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0027 a0001c0001t0001 a0001c0001t0002 a0001c0001t0027	a0001c0001t0001g0093 a0001c0001t0001g0111 a0001c0001t0001g0116 others(19): Show a0001c0001t0001g0093 a0001c0001t0001g0111 a0001c0001t0001g0116 a0001c0001t0001g0117 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0123 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0144 a0001c0001t0002g0087 a0001c0001t0002g0094 a0001c0001t0002g0105 a0001c0001t0002g0108 a0001c0001t0002g0109 a0001c0001t0002g0154 a0001c0001t0002g0155 a0001c0001t0002g0156 a0001c0001t0002g0177 a0001c0001t0002g0178 a0001c0001t0027g0158	22	190	0.1158	6	c.181 others(25): Show c.1814+4634_1814+4639dupTGTTGT	BRAF	ENSG00000157764.14	transcript	ENST00000644969.2	protein_coding	14/19			chr7	TogoVar
BRAF_chr7_140714337_140929929	140884429	A A	ATGTGTG ATGTGTG	intron_variant intron_variant	MODIFIER	HG01168.hp1 HG03540.hp1 HG03688.hp1 others(4): Show HG01168.hp1 HG03540.hp1 HG03688.hp1 HG04199.hp1 NA18956.hp1 NA18959.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0005 a0001c0002t0001 a0001c0002t0023 others(1): Show a0001c0001t0005 a0001c0002t0001 a0001c0002t0023 a0001c0002t0028	a0001c0001t0005g0188 a0001c0002t0001g0037 a0001c0002t0001g0047 others(4): Show a0001c0001t0005g0188 a0001c0002t0001g0037 a0001c0002t0001g0047 a0001c0002t0001g0052 a0001c0002t0001g0060 a0001c0002t0023g0070 a0001c0002t0028g0061	7	190	0.0368	6	c.139 others(25): Show c.139-34223_139-34218dupCACACA	BRAF	ENSG00000157764.14	transcript	ENST00000644969.2	protein_coding	1/19			chr7	TogoVar
BRAF_chr7_140725665_140929929	140732170	C C	CAAAAAA CAAAAAA	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00558.hp2 HG00673.hp1 NA18959.hp1 others(2): Show HG00558.hp2 HG00673.hp1 NA18959.hp1 NA19001.hp2 NA19068.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0010 a0001c0002t0010	a0001c0002t0010g0004 a0001c0002t0010g0005 a0001c0002t0010g0041 others(2): Show a0001c0002t0010g0004 a0001c0002t0010g0005 a0001c0002t0010g0041 a0001c0002t0010g0048 a0001c0002t0010g0052	5	196	0.0255	6	c.24 others(17): Show c.2421_*2426dupTTTTTT	BRAF	ENSG00000157764.14	transcript	ENST00000646891.2	protein_coding	18/18	2426		chr7	TogoVar
BRAF_chr7_140725665_140929929	140772272	T T	TACAACA TACAACA	intron_variant intron_variant	MODIFIER	HG01074.hp2 HG01884.hp1 HG01891.hp1 others(19): Show HG01074.hp2 HG01884.hp1 HG01891.hp1 HG02109.hp1 HG02257.hp1 HG02615.hp1 HG02622.hp1 HG02895.hp2 HG02896.hp1 HG02897.hp1 HG03209.hp2 HG03225.hp1 HG03579.hp2 HG04199.hp2 NA18906.hp1 NA18963.hp1 NA18986.hp1 NA19068.hp1 NA19084.hp1 NA19240.hp1 NA19240.hp2 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0016 others(5): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0016 a0001c0001t0023 a0001c0001t0025 a0001c0001t0028 a0001c0001t0036 a0001c0001t0037	a0001c0001t0002g0090 a0001c0001t0002g0098 a0001c0001t0002g0109 others(19): Show a0001c0001t0002g0090 a0001c0001t0002g0098 a0001c0001t0002g0109 a0001c0001t0002g0112 a0001c0001t0002g0113 a0001c0001t0002g0160 a0001c0001t0002g0161 a0001c0001t0002g0163 a0001c0001t0002g0182 a0001c0001t0002g0183 a0001c0001t0003g0123 a0001c0001t0003g0124 a0001c0001t0003g0125 a0001c0001t0003g0127 a0001c0001t0003g0129 a0001c0001t0016g0120 a0001c0001t0016g0121 a0001c0001t0023g0128 a0001c0001t0025g0115 a0001c0001t0028g0149 a0001c0001t0036g0097 a0001c0001t0037g0159	22	196	0.1122	6	c.169 others(25): Show c.1694+4634_1694+4639dupTGTTGT	BRAF	ENSG00000157764.14	transcript	ENST00000646891.2	protein_coding	13/17			chr7	TogoVar
BRAF_chr7_140725665_140929929	140884429	A A	ATGTGTG ATGTGTG	intron_variant intron_variant	MODIFIER	HG01168.hp2 HG03540.hp2 HG03688.hp1 others(4): Show HG01168.hp2 HG03540.hp2 HG03688.hp1 HG04199.hp1 NA18956.hp1 NA18959.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0005 a0001c0002t0001 a0001c0002t0006 others(4): Show a0001c0001t0005 a0001c0002t0001 a0001c0002t0006 a0001c0002t0007 a0001c0002t0010 a0001c0002t0019 a0001c0002t0051	a0001c0001t0005g0193 a0001c0002t0001g0063 a0001c0002t0006g0064 others(4): Show a0001c0001t0005g0193 a0001c0002t0001g0063 a0001c0002t0006g0064 a0001c0002t0007g0073 a0001c0002t0010g0048 a0001c0002t0019g0054 a0001c0002t0051g0038	7	196	0.0357	6	c.139 others(25): Show c.139-34223_139-34218dupCACACA	BRAF	ENSG00000157764.14	transcript	ENST00000646891.2	protein_coding	1/17			chr7	TogoVar
BRAP_chr12_111637146_111690956	111651225	T T	TTAATAA TTAATAA	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00597.hp2 HG00738.hp1 others(70): Show HG00099.hp1 HG00597.hp2 HG00738.hp1 HG01081.hp2 HG01099.hp2 HG01175.hp1 HG01243.hp2 HG01361.hp1 HG02027.hp2 HG02040.hp1 HG02055.hp2 HG02056.hp1 HG02071.hp2 HG02129.hp2 HG02145.hp2 HG02165.hp1 HG02258.hp2 HG02486.hp1 HG02630.hp1 HG02683.hp2 HG02738.hp1 HG02886.hp1 HG02922.hp1 HG02922.hp2 HG03130.hp1 HG03139.hp2 HG03195.hp1 HG03453.hp1 HG03471.hp2 HG03490.hp1 HG03492.hp2 HG03516.hp1 HG03654.hp2 HG03927.hp1 HG04115.hp1 HG06807.hp2 NA18945.hp2 NA18946.hp1 NA18947.hp2 NA18949.hp1 NA18950.hp2 NA18959.hp1 NA18960.hp2 NA18964.hp2 NA18965.hp2 NA18967.hp1 NA18968.hp2 NA18969.hp1 NA18971.hp2 NA18978.hp2 NA18979.hp2 NA18980.hp1 NA18981.hp1 NA18982.hp1 NA18989.hp2 NA18994.hp1 NA19009.hp2 NA19012.hp1 NA19043.hp2 NA19057.hp1 NA19058.hp1 NA19062.hp1 NA19065.hp1 NA19066.hp1 NA19068.hp1 NA19070.hp1 NA19076.hp2 NA19077.hp1 NA19081.hp2 NA19082.hp2 NA19083.hp2 NA19084.hp2 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0008 a0001c0001 a0001c0008	a0001c0001t0001 a0001c0001t0009 a0001c0001t0010 others(1): Show a0001c0001t0001 a0001c0001t0009 a0001c0001t0010 a0001c0008t0001	a0001c0001t0001g0006 a0001c0001t0001g0009 a0001c0001t0001g0010 others(62): Show a0001c0001t0001g0006 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0022 a0001c0001t0001g0025 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0050 a0001c0001t0001g0051 a0001c0001t0001g0054 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0082 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0089 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0106 a0001c0001t0001g0183 a0001c0001t0001g0184 a0001c0001t0001g0186 a0001c0001t0001g0188 a0001c0001t0001g0193 a0001c0001t0001g0194 a0001c0001t0001g0222 a0001c0001t0001g0225 a0001c0001t0001g0264 a0001c0001t0009g0187 a0001c0001t0010g0316 a0001c0008t0001g0205	73	364	0.2006	6	c.131 others(25): Show c.1312-1189_1312-1184dupTTATTA	BRAP	ENSG00000089234.16	transcript	ENST00000419234.9	protein_coding	10/11			chr12	TogoVar
BRAT1_chr7_2532810_2560524	2533376	A A	ATATTTT ATATTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01109.hp1 HG01167.hp2 HG01243.hp1 others(4): Show HG01109.hp1 HG01167.hp2 HG01243.hp1 HG02486.hp2 HG03491.hp2 HG04228.hp2 NA20129.hp1	a0001 a0006 a0008 a0001 a0006 a0008	a0001c0002 a0001c0010 a0001c0021 others(2): Show a0001c0002 a0001c0010 a0001c0021 a0006c0006 a0008c0016	a0001c0002t0001 a0001c0002t0003 a0001c0010t0004 others(3): Show a0001c0002t0001 a0001c0002t0003 a0001c0010t0004 a0001c0021t0004 a0006c0006t0001 a0008c0016t0001	a0001c0002t0001g0307 a0001c0002t0003g0009 a0001c0010t0004g0384 others(4): Show a0001c0002t0001g0307 a0001c0002t0003g0009 a0001c0010t0004g0384 a0001c0010t0004g0387 a0001c0021t0004g0385 a0006c0006t0001g0349 a0008c0016t0001g0311	7	424	0.0165	6	c.46 others(17): Show c.4692_*4693insAAAATA	BRAT1	ENSG00000106009.16	transcript	ENST00000340611.9	protein_coding		4433		chr7	TogoVar
BRAT1_chr7_2532810_2560524	2544200	G G	GTTTTTT GTTTTTT	intron_variant intron_variant	MODIFIER	HG00733.hp2 HG00738.hp1 HG00741.hp2 others(39): Show HG00733.hp2 HG00738.hp1 HG00741.hp2 HG01070.hp1 HG01167.hp1 HG01192.hp2 HG01346.hp1 HG01346.hp2 HG01891.hp1 HG01934.hp2 HG01975.hp1 HG01978.hp1 HG02055.hp2 HG02293.hp2 HG02300.hp2 HG02451.hp1 HG02486.hp1 HG02572.hp2 HG02630.hp1 HG02698.hp1 HG02717.hp1 HG02809.hp1 HG02818.hp2 HG02886.hp2 HG02970.hp2 HG02976.hp2 HG03041.hp2 HG03098.hp2 HG03195.hp2 HG03471.hp1 HG03471.hp2 HG03540.hp1 HG03579.hp2 HG03831.hp1 NA18747.hp1 NA18950.hp1 NA18981.hp1 NA18983.hp1 NA18985.hp2 NA19002.hp1 NA20129.hp1 NA20300.hp2	a0001 a0002 a0003 others(7): Show a0001 a0002 a0003 a0004 a0006 a0007 a0008 a0010 a0013 a0020	a0001c0001 a0001c0002 a0002c0004 others(9): Show a0001c0001 a0001c0002 a0002c0004 a0003c0005 a0004c0007 a0006c0006 a0007c0009 a0008c0016 a0008c0033 a0010c0018 a0013c0026 a0020c0019	a0001c0001t0001 a0001c0002t0001 a0001c0002t0003 others(10): Show a0001c0001t0001 a0001c0002t0001 a0001c0002t0003 a0002c0004t0001 a0003c0005t0002 a0004c0007t0001 a0006c0006t0001 a0007c0009t0003 a0008c0016t0001 a0008c0033t0001 a0010c0018t0003 a0013c0026t0001 a0020c0019t0002	a0001c0001t0001g0148 a0001c0001t0001g0150 a0001c0001t0001g0161 others(36): Show a0001c0001t0001g0148 a0001c0001t0001g0150 a0001c0001t0001g0161 a0001c0001t0001g0162 a0001c0002t0001g0070 a0001c0002t0001g0076 a0001c0002t0001g0082 a0001c0002t0001g0088 a0001c0002t0001g0106 a0001c0002t0001g0108 a0001c0002t0001g0112 a0001c0002t0001g0322 a0001c0002t0001g0323 a0001c0002t0001g0327 a0001c0002t0003g0075 a0001c0002t0003g0079 a0001c0002t0003g0095 a0001c0002t0003g0102 a0002c0004t0001g0363 a0003c0005t0002g0007 a0003c0005t0002g0038 a0003c0005t0002g0057 a0003c0005t0002g0058 a0003c0005t0002g0059 a0003c0005t0002g0060 a0003c0005t0002g0109 a0004c0007t0001g0310 a0006c0006t0001g0350 a0006c0006t0001g0376 a0006c0006t0001g0377 a0006c0006t0001g0378 a0007c0009t0003g0003 a0007c0009t0003g0093 a0007c0009t0003g0094 a0008c0016t0001g0311 a0008c0033t0001g0379 a0010c0018t0003g0097 a0013c0026t0001g0381 a0020c0019t0002g0054	42	424	0.0991	6	c.431 others(21): Show c.431-244_431-239dupAAAAAA	BRAT1	ENSG00000106009.16	transcript	ENST00000340611.9	protein_coding	4/13			chr7	TogoVar
BRAT1_chr7_2532810_2560524	2545363	C C	CAAAAAA CAAAAAA	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01243.hp1 HG01891.hp1 others(11): Show HG01109.hp1 HG01243.hp1 HG01891.hp1 HG02280.hp1 HG02486.hp1 HG02559.hp1 HG02717.hp2 HG02723.hp2 HG02895.hp1 HG02895.hp2 HG02897.hp2 HG03041.hp1 HG03195.hp2 NA19068.hp2	a0001 a0002 a0006 a0001 a0002 a0006	a0001c0002 a0002c0004 a0006c0006 a0001c0002 a0002c0004 a0006c0006	a0001c0002t0001 a0002c0004t0001 a0006c0006t0001 a0001c0002t0001 a0002c0004t0001 a0006c0006t0001	a0001c0002t0001g0024 a0001c0002t0001g0303 a0001c0002t0001g0304 others(10): Show a0001c0002t0001g0024 a0001c0002t0001g0303 a0001c0002t0001g0304 a0001c0002t0001g0307 a0001c0002t0001g0322 a0001c0002t0001g0324 a0001c0002t0001g0326 a0001c0002t0001g0336 a0001c0002t0001g0337 a0002c0004t0001g0319 a0006c0006t0001g0349 a0006c0006t0001g0350 a0006c0006t0001g0377	14	424	0.0330	6	c.283 others(21): Show c.283-313_283-308dupTTTTTT	BRAT1	ENSG00000106009.16	transcript	ENST00000340611.9	protein_coding	3/13			chr7	TogoVar
BRAT1_chr7_2532810_2560524	2552081	A A	AATATAT AATATAT	intron_variant intron_variant	MODIFIER	HG01069.hp1 HG02622.hp1 HG02976.hp1 others(1): Show HG01069.hp1 HG02622.hp1 HG02976.hp1 NA19003.hp1	a0001 a0006 a0001 a0006	a0001c0001 a0001c0002 a0006c0006 a0001c0001 a0001c0002 a0006c0006	a0001c0001t0001 a0001c0002t0001 a0006c0006t0001 a0001c0001t0001 a0001c0002t0001 a0006c0006t0001	a0001c0001t0001g0127 a0001c0001t0001g0271 a0001c0002t0001g0104 others(1): Show a0001c0001t0001g0127 a0001c0001t0001g0271 a0001c0002t0001g0104 a0006c0006t0001g0368	4	424	0.0094	6	c.127 others(23): Show c.127+2218_127+2223dupATATAT	BRAT1	ENSG00000106009.16	transcript	ENST00000340611.9	protein_coding	2/13			chr7	TogoVar
BRCA1_chr17_43039295_43130364	43052780	A A	AACACAC AACACAC	intron_variant intron_variant	MODIFIER	HG01169.hp2 HG01346.hp1 HG01433.hp2 others(4): Show HG01169.hp2 HG01346.hp1 HG01433.hp2 HG03098.hp1 HG03471.hp2 HG03669.hp2 NA21309.hp1	a0002 a0003 a0005 a0002 a0003 a0005	a0002c0002 a0002c0005 a0003c0003 others(1): Show a0002c0002 a0002c0005 a0003c0003 a0005c0006	a0002c0002t0003 a0002c0005t0003 a0003c0003t0002 others(2): Show a0002c0002t0003 a0002c0005t0003 a0003c0003t0002 a0003c0003t0011 a0005c0006t0003	a0002c0002t0003g0029 a0002c0002t0003g0031 a0002c0002t0003g0043 others(4): Show a0002c0002t0003g0029 a0002c0002t0003g0031 a0002c0002t0003g0043 a0002c0005t0003g0028 a0003c0003t0002g0157 a0003c0003t0011g0109 a0005c0006t0003g0070	7	276	0.0254	6	c.527 others(25): Show c.5278-1669_5278-1664dupGTGTGT	BRCA1	ENSG00000012048.25	transcript	ENST00000357654.9	protein_coding	19/22			chr17	TogoVar
BRCA1_chr17_43039295_43130364	43059469	C C	CACAACA CACAACA	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00639.hp2 HG01070.hp2 others(37): Show HG00280.hp1 HG00639.hp2 HG01070.hp2 HG01167.hp1 HG01433.hp1 HG01517.hp1 HG01952.hp2 HG01975.hp2 HG02004.hp1 HG02040.hp1 HG02056.hp2 HG02109.hp1 HG02280.hp2 HG02559.hp1 HG02622.hp2 HG02683.hp1 HG02698.hp1 HG02717.hp2 HG02735.hp2 HG02809.hp1 HG02922.hp2 HG03225.hp1 HG03239.hp2 HG03490.hp1 HG03492.hp1 HG03669.hp1 HG03688.hp2 HG03704.hp1 HG03831.hp2 HG06807.hp2 NA18960.hp2 NA18971.hp1 NA18983.hp1 NA18992.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19058.hp1 NA19064.hp2 NA19086.hp1	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0004 a0007 a0020	a0001c0001 a0002c0002 a0003c0003 others(3): Show a0001c0001 a0002c0002 a0003c0003 a0004c0004 a0007c0008 a0020c0013	a0001c0001t0001 a0002c0002t0002 a0003c0003t0002 others(4): Show a0001c0001t0001 a0002c0002t0002 a0003c0003t0002 a0003c0003t0004 a0004c0004t0001 a0007c0008t0001 a0020c0013t0014	a0001c0001t0001g0172 a0001c0001t0001g0176 a0001c0001t0001g0198 others(37): Show a0001c0001t0001g0172 a0001c0001t0001g0176 a0001c0001t0001g0198 a0001c0001t0001g0202 a0001c0001t0001g0203 a0001c0001t0001g0206 a0001c0001t0001g0207 a0001c0001t0001g0208 a0001c0001t0001g0210 a0001c0001t0001g0212 a0001c0001t0001g0215 a0001c0001t0001g0216 a0001c0001t0001g0218 a0001c0001t0001g0219 a0001c0001t0001g0220 a0001c0001t0001g0222 a0001c0001t0001g0224 a0001c0001t0001g0225 a0001c0001t0001g0237 a0001c0001t0001g0244 a0001c0001t0001g0246 a0001c0001t0001g0250 a0001c0001t0001g0255 a0001c0001t0001g0256 a0001c0001t0001g0264 a0002c0002t0002g0072 a0003c0003t0002g0113 a0003c0003t0002g0140 a0003c0003t0002g0141 a0003c0003t0002g0148 a0003c0003t0004g0117 a0003c0003t0004g0163 a0004c0004t0001g0204 a0004c0004t0001g0240 a0004c0004t0001g0241 a0004c0004t0001g0251 a0004c0004t0001g0252 a0004c0004t0001g0257 a0007c0008t0001g0266 a0020c0013t0014g0100	40	276	0.1449	6	c.519 others(25): Show c.5194-2340_5194-2335dupTGTTGT	BRCA1	ENSG00000012048.25	transcript	ENST00000357654.9	protein_coding	18/22			chr17	TogoVar
BRCA1_chr17_43039295_43130364	43086109	T T	TACACAC TACACAC	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG00438.hp1 HG00544.hp1 others(61): Show HG00423.hp1 HG00438.hp1 HG00544.hp1 HG00558.hp2 HG00621.hp1 HG01069.hp1 HG01070.hp2 HG01099.hp2 HG01109.hp1 HG01123.hp1 HG01192.hp2 HG01258.hp2 HG01361.hp1 HG01433.hp1 HG01517.hp1 HG01884.hp1 HG01975.hp2 HG02015.hp2 HG02056.hp2 HG02074.hp1 HG02165.hp1 HG02257.hp2 HG02258.hp1 HG02273.hp1 HG02300.hp2 HG02602.hp2 HG02615.hp2 HG02622.hp2 HG02683.hp2 HG02698.hp1 HG02723.hp2 HG02735.hp2 HG02809.hp2 HG02922.hp1 HG02922.hp2 HG03130.hp2 HG03195.hp1 HG03209.hp1 HG03239.hp2 HG03471.hp1 HG03486.hp2 HG03492.hp2 HG03516.hp2 HG03831.hp2 HG04204.hp1 HG06807.hp1 NA18940.hp1 NA18947.hp2 NA18960.hp2 NA18962.hp2 NA18969.hp1 NA18971.hp1 NA18974.hp2 NA18981.hp1 NA18983.hp1 NA18992.hp1 NA19030.hp1 NA19056.hp2 NA19058.hp1 NA19079.hp2 NA19081.hp1 NA19240.hp2 NA20805.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0014 a0015 a0019	a0001c0001 a0001c0022 a0001c0024 others(7): Show a0001c0001 a0001c0022 a0001c0024 a0002c0002 a0003c0003 a0003c0010 a0003c0018 a0014c0023 a0015c0025 a0019c0027	a0001c0001t0001 a0001c0001t0002 a0001c0001t0013 others(12): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0013 a0001c0022t0001 a0001c0024t0001 a0002c0002t0003 a0003c0003t0002 a0003c0003t0003 a0003c0003t0004 a0003c0003t0006 a0003c0010t0002 a0003c0018t0004 a0014c0023t0001 a0015c0025t0001 a0019c0027t0001	a0001c0001t0001g0167 a0001c0001t0001g0171 a0001c0001t0001g0174 others(61): Show a0001c0001t0001g0167 a0001c0001t0001g0171 a0001c0001t0001g0174 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0180 a0001c0001t0001g0182 a0001c0001t0001g0184 a0001c0001t0001g0185 a0001c0001t0001g0187 a0001c0001t0001g0193 a0001c0001t0001g0194 a0001c0001t0001g0195 a0001c0001t0001g0198 a0001c0001t0001g0199 a0001c0001t0001g0201 a0001c0001t0001g0203 a0001c0001t0001g0206 a0001c0001t0001g0210 a0001c0001t0001g0211 a0001c0001t0001g0212 a0001c0001t0001g0215 a0001c0001t0001g0216 a0001c0001t0001g0219 a0001c0001t0001g0221 a0001c0001t0001g0222 a0001c0001t0001g0224 a0001c0001t0001g0225 a0001c0001t0001g0229 a0001c0001t0001g0232 a0001c0001t0001g0234 a0001c0001t0001g0237 a0001c0001t0001g0250 a0001c0001t0001g0259 a0001c0001t0001g0263 a0001c0001t0001g0267 a0001c0001t0002g0173 a0001c0001t0002g0209 a0001c0001t0002g0258 a0001c0001t0013g0205 a0001c0022t0001g0228 a0001c0024t0001g0231 a0002c0002t0003g0030 a0003c0003t0002g0133 a0003c0003t0002g0160 a0003c0003t0002g0276 a0003c0003t0003g0116 a0003c0003t0003g0122 a0003c0003t0004g0101 a0003c0003t0004g0117 a0003c0003t0004g0136 a0003c0003t0004g0138 a0003c0003t0004g0153 a0003c0003t0004g0154 a0003c0003t0004g0155 a0003c0003t0004g0156 a0003c0003t0004g0163 a0003c0003t0006g0115 a0003c0003t0006g0135 a0003c0010t0002g0164 a0003c0018t0004g0111 a0014c0023t0001g0170 a0015c0025t0001g0102 a0019c0027t0001g0269	64	276	0.2319	6	c.418 others(25): Show c.4186-3540_4186-3535dupGTGTGT	BRCA1	ENSG00000012048.25	transcript	ENST00000357654.9	protein_coding	11/22			chr17	TogoVar
BRCA1_chr17_43039295_43130364	43090737	T T	TGTGCGC TGTGCGC	intron_variant intron_variant	MODIFIER	HG02615.hp1 NA18522.hp1 NA20129.hp2 HG02615.hp1 NA18522.hp1 NA20129.hp2	a0006 a0006	a0006c0009 a0006c0026 a0006c0009 a0006c0026	a0006c0009t0005 a0006c0026t0005 a0006c0009t0005 a0006c0026t0005	a0006c0009t0005g0273 a0006c0009t0005g0274 a0006c0026t0005g0275 a0006c0009t0005g0273 a0006c0009t0005g0274 a0006c0026t0005g0275	3	276	0.0109	6	c.418 others(23): Show c.4185+201_4185+206dupGCGCAC	BRCA1	ENSG00000012048.25	transcript	ENST00000357654.9	protein_coding	11/22			chr17	TogoVar
BRCA1_chr17_43039295_43130364	43100655	A A	ATATGTT ATATGTT	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG02004.hp1 HG03490.hp1 others(6): Show HG00099.hp1 HG02004.hp1 HG03490.hp1 HG03492.hp1 HG03704.hp1 NA18951.hp2 NA18969.hp1 NA19004.hp2 NA19080.hp2	a0001 a0004 a0007 a0001 a0004 a0007	a0001c0001 a0004c0004 a0007c0008 a0001c0001 a0004c0004 a0007c0008	a0001c0001t0001 a0004c0004t0001 a0007c0008t0001 a0001c0001t0001 a0004c0004t0001 a0007c0008t0001	a0001c0001t0001g0211 a0001c0001t0001g0226 a0001c0001t0001g0227 others(6): Show a0001c0001t0001g0211 a0001c0001t0001g0226 a0001c0001t0001g0227 a0001c0001t0001g0236 a0004c0004t0001g0204 a0004c0004t0001g0238 a0004c0004t0001g0240 a0004c0004t0001g0241 a0007c0008t0001g0266	9	276	0.0326	6	c.442 others(21): Show c.442-776_442-775insAACATA	BRCA1	ENSG00000012048.25	transcript	ENST00000357654.9	protein_coding	6/22			chr17	TogoVar
BRCC3_chrX_155066508_155128077	155125212	A A	AATATAT AATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02886.hp1 HG02886.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0125 a0001c0001t0002g0125	1	254	0.0039	6	c.40 others(17): Show c.4008_*4009insATATAT	BRCC3	ENSG00000185515.16	transcript	ENST00000330045.12	protein_coding		2136		chrX	TogoVar
BRD1_chr22_49768283_49832873	49827360	A A	AGCCGCC AGCCGCC	intron_variant intron_variant	MODIFIER	HG00597.hp2 HG01256.hp2 HG01361.hp2 others(50): Show HG00597.hp2 HG01256.hp2 HG01361.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG02040.hp1 HG02040.hp2 HG02071.hp2 HG02145.hp1 HG02145.hp2 HG02257.hp1 HG02280.hp1 HG02300.hp1 HG02486.hp1 HG02572.hp1 HG02698.hp1 HG02735.hp2 HG02886.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG03098.hp2 HG03130.hp2 HG03139.hp1 HG03195.hp1 HG03225.hp2 HG03486.hp2 HG03540.hp1 HG03579.hp2 HG03654.hp2 HG03704.hp1 NA18522.hp1 NA18612.hp1 NA18950.hp1 NA18957.hp2 NA18965.hp1 NA18966.hp2 NA18967.hp2 NA18971.hp1 NA18974.hp2 NA19043.hp2 NA19055.hp2 NA19067.hp1 NA19088.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp2	a0001 a0004 a0006 a0001 a0004 a0006	a0001c0001 a0001c0002 a0001c0004 others(5): Show a0001c0001 a0001c0002 a0001c0004 a0001c0005 a0001c0008 a0001c0019 a0004c0013 a0006c0014	a0001c0001t0001 a0001c0001t0004 a0001c0002t0001 others(8): Show a0001c0001t0001 a0001c0001t0004 a0001c0002t0001 a0001c0002t0004 a0001c0002t0008 a0001c0004t0001 a0001c0005t0001 a0001c0008t0001 a0001c0019t0001 a0004c0013t0001 a0006c0014t0001	a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0022 others(47): Show a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0028 a0001c0001t0001g0042 a0001c0001t0004g0013 a0001c0002t0001g0003 a0001c0002t0001g0029 a0001c0002t0001g0030 a0001c0002t0001g0031 a0001c0002t0001g0032 a0001c0002t0001g0033 a0001c0002t0001g0034 a0001c0002t0001g0035 a0001c0002t0001g0036 a0001c0002t0001g0037 a0001c0002t0001g0038 a0001c0002t0001g0040 a0001c0002t0001g0041 a0001c0002t0001g0216 a0001c0002t0001g0217 a0001c0002t0001g0218 a0001c0002t0004g0014 a0001c0002t0004g0015 a0001c0002t0004g0016 a0001c0002t0008g0012 a0001c0004t0001g0195 a0001c0004t0001g0196 a0001c0004t0001g0197 a0001c0004t0001g0199 a0001c0004t0001g0200 a0001c0004t0001g0201 a0001c0004t0001g0202 a0001c0004t0001g0203 a0001c0005t0001g0009 a0001c0005t0001g0198 a0001c0005t0001g0204 a0001c0005t0001g0205 a0001c0005t0001g0206 a0001c0005t0001g0207 a0001c0005t0001g0210 a0001c0008t0001g0019 a0001c0019t0001g0039 a0004c0013t0001g0209 a0006c0014t0001g0208	53	258	0.2054	6	c.-15 others(21): Show c.-15+131_-15+136dupGGCGGC	BRD1	ENSG00000100425.19	transcript	ENST00000404760.6	protein_coding	1/12			chr22	TogoVar
BRD1_chr22_49768283_49832873	49827708	G G	GCGGGCT GCGGGCT	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00597.hp2 NA18612.hp1 NA18974.hp2 others(1): Show HG00597.hp2 NA18612.hp1 NA18974.hp2 NA19055.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0004 a0001c0002t0004 a0001c0001t0004 a0001c0002t0004	a0001c0001t0004g0013 a0001c0002t0004g0014 a0001c0002t0004g0015 others(1): Show a0001c0001t0004g0013 a0001c0002t0004g0014 a0001c0002t0004g0015 a0001c0002t0004g0016	4	258	0.0155	6	c.-23 others(15): Show c.-232_-227dupAGCCCG	BRD1	ENSG00000100425.19	transcript	ENST00000404760.6	protein_coding	1/13	3392		chr22	TogoVar
BRD1_chr22_49768283_49832873	49832717	A A	AACACAC AACACAC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01109.hp1 HG01256.hp1 HG01496.hp1 others(12): Show HG01109.hp1 HG01256.hp1 HG01496.hp1 HG02155.hp2 HG02300.hp2 HG02486.hp2 HG02602.hp1 HG02723.hp2 HG03041.hp1 HG03492.hp2 HG04199.hp2 NA18940.hp2 NA19009.hp1 NA20752.hp1 NA20752.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0010 others(2): Show a0001c0001 a0001c0002 a0001c0010 a0001c0018 a0002c0003	a0001c0001t0002 a0001c0002t0002 a0001c0010t0002 others(2): Show a0001c0001t0002 a0001c0002t0002 a0001c0010t0002 a0001c0018t0001 a0002c0003t0003	a0001c0001t0002g0005 a0001c0001t0002g0069 a0001c0001t0002g0073 others(12): Show a0001c0001t0002g0005 a0001c0001t0002g0069 a0001c0001t0002g0073 a0001c0001t0002g0077 a0001c0001t0002g0088 a0001c0001t0002g0095 a0001c0001t0002g0106 a0001c0001t0002g0126 a0001c0001t0002g0138 a0001c0002t0002g0157 a0001c0010t0002g0131 a0001c0018t0001g0049 a0002c0003t0003g0010 a0002c0003t0003g0222 a0002c0003t0003g0223	15	258	0.0581	6	c.-52 others(17): Show c.-5236_-5235insGTGTGT	BRD1	ENSG00000100425.19	transcript	ENST00000404760.6	protein_coding		4845		chr22	TogoVar
BRD2_chr6_32963594_32986501	32975307	T T	TGTGTGA TGTGTGA	intron_variant intron_variant	MODIFIER	HG01358.hp2 HG02451.hp1 HG03130.hp2 others(1): Show HG01358.hp2 HG02451.hp1 HG03130.hp2 HG03669.hp1	a0001 a0004 a0010 a0001 a0004 a0010	a0001c0006 a0004c0011 a0010c0017 a0001c0006 a0004c0011 a0010c0017	a0001c0006t0005 a0004c0011t0007 a0010c0017t0053 a0001c0006t0005 a0004c0011t0007 a0010c0017t0053	a0001c0006t0005g0113 a0004c0011t0007g0040 a0010c0017t0053g0061 a0001c0006t0005g0113 a0004c0011t0007g0040 a0010c0017t0053g0061	4	469	0.0085	6	c.334 others(19): Show c.334-74_334-73insTGAGTG	BRD2	ENSG00000204256.14	transcript	ENST00000374825.9	protein_coding	3/12		INFO_REALIGN_3_PRIME	chr6	TogoVar
BRD3_chr9_134025305_134073026	134060587	G G	GACACAC GACACAC	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00323.hp2 HG00738.hp2 others(27): Show HG00099.hp2 HG00323.hp2 HG00738.hp2 HG01074.hp2 HG01081.hp1 HG01099.hp2 HG01169.hp1 HG01261.hp1 HG01358.hp2 HG01433.hp1 HG01934.hp2 HG01975.hp2 HG02109.hp1 HG02257.hp1 HG02257.hp2 HG02451.hp1 HG02559.hp1 HG02572.hp2 HG02622.hp1 HG02922.hp2 HG03041.hp1 HG03471.hp2 HG03831.hp2 HG06807.hp1 NA18522.hp2 NA18747.hp1 NA18906.hp1 NA18906.hp2 NA19065.hp1 NA20805.hp2	a0001 a0005 a0001 a0005	a0001c0001 a0001c0002 a0001c0005 others(1): Show a0001c0001 a0001c0002 a0001c0005 a0005c0021	a0001c0001t0002 a0001c0002t0001 a0001c0002t0005 others(13): Show a0001c0001t0002 a0001c0002t0001 a0001c0002t0005 a0001c0002t0006 a0001c0002t0015 a0001c0002t0017 a0001c0002t0022 a0001c0002t0026 a0001c0002t0042 a0001c0002t0046 a0001c0002t0049 a0001c0002t0056 a0001c0002t0058 a0001c0005t0010 a0001c0005t0023 a0005c0021t0031	a0001c0001t0002g0023 a0001c0002t0001g0210 a0001c0002t0005g0007 others(23): Show a0001c0001t0002g0023 a0001c0002t0001g0210 a0001c0002t0005g0007 a0001c0002t0005g0016 a0001c0002t0005g0077 a0001c0002t0005g0078 a0001c0002t0005g0082 a0001c0002t0005g0085 a0001c0002t0005g0207 a0001c0002t0006g0211 a0001c0002t0015g0062 a0001c0002t0017g0079 a0001c0002t0017g0083 a0001c0002t0022g0205 a0001c0002t0022g0209 a0001c0002t0026g0080 a0001c0002t0042g0208 a0001c0002t0046g0081 a0001c0002t0049g0035 a0001c0002t0056g0032 a0001c0002t0058g0084 a0001c0005t0010g0202 a0001c0005t0010g0273 a0001c0005t0023g0203 a0001c0005t0023g0204 a0005c0021t0031g0206	30	334	0.0898	6	c.-11 others(25): Show c.-113-7003_-113-6998dupGTGTGT	BRD3	ENSG00000169925.17	transcript	ENST00000303407.12	protein_coding	1/11			chr9	TogoVar
BRD4_chr19_15230519_15337539	15332501	A A	AGCCGCC AGCCGCC	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00140.hp1 HG00639.hp2 HG01243.hp1 others(16): Show HG00140.hp1 HG00639.hp2 HG01243.hp1 HG02155.hp2 HG02165.hp1 HG02451.hp1 HG02559.hp1 HG02922.hp1 HG02922.hp2 HG02976.hp1 HG03130.hp1 HG03130.hp2 HG03225.hp1 HG03490.hp1 HG03492.hp1 HG03516.hp2 HG04204.hp2 NA19240.hp2 NA21309.hp1	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0001c0004 a0001c0030 others(2): Show a0001c0001 a0001c0004 a0001c0030 a0002c0003 a0004c0005	a0001c0001t0009 a0001c0001t0035 a0001c0001t0036 others(12): Show a0001c0001t0009 a0001c0001t0035 a0001c0001t0036 a0001c0001t0037 a0001c0001t0039 a0001c0001t0040 a0001c0001t0041 a0001c0004t0042 a0001c0004t0043 a0001c0004t0044 a0001c0030t0034 a0002c0003t0017 a0002c0003t0038 a0004c0005t0009 a0004c0005t0017	a0001c0001t0009g0008 a0001c0001t0009g0010 a0001c0001t0009g0014 others(16): Show a0001c0001t0009g0008 a0001c0001t0009g0010 a0001c0001t0009g0014 a0001c0001t0009g0022 a0001c0001t0035g0021 a0001c0001t0036g0015 a0001c0001t0037g0012 a0001c0001t0039g0018 a0001c0001t0040g0020 a0001c0001t0041g0017 a0001c0004t0042g0023 a0001c0004t0043g0026 a0001c0004t0044g0019 a0001c0030t0034g0024 a0002c0003t0017g0016 a0002c0003t0038g0013 a0004c0005t0009g0009 a0004c0005t0009g0011 a0004c0005t0017g0025	19	208	0.0914	6	c.-25 others(15): Show c.-252_-247dupGGCGGC	BRD4	ENSG00000141867.19	transcript	ENST00000679869.1	protein_coding	1/20	59403		chr19	TogoVar
BRD7_chr16_50310957_50373988	50341177	T T	TACACAC TACACAC	intron_variant intron_variant	MODIFIER	HG01361.hp1 HG02895.hp1 HG03710.hp2 others(3): Show HG01361.hp1 HG02895.hp1 HG03710.hp2 HG03942.hp1 NA18522.hp2 NA18998.hp1	a0001 a0003 a0010 a0001 a0003 a0010	a0001c0001 a0001c0002 a0003c0004 others(1): Show a0001c0001 a0001c0002 a0003c0004 a0010c0009	a0001c0001t0004 a0001c0001t0033 a0001c0002t0002 others(3): Show a0001c0001t0004 a0001c0001t0033 a0001c0002t0002 a0001c0002t0036 a0003c0004t0010 a0010c0009t0004	a0001c0001t0004g0215 a0001c0001t0033g0266 a0001c0002t0002g0299 others(3): Show a0001c0001t0004g0215 a0001c0001t0033g0266 a0001c0002t0002g0299 a0001c0002t0036g0310 a0003c0004t0010g0270 a0010c0009t0004g0217	6	402	0.0149	6	c.592 others(23): Show c.592-1097_592-1092dupGTGTGT	BRD7	ENSG00000166164.17	transcript	ENST00000394688.8	protein_coding	5/16			chr16	TogoVar
BRD7_chr16_50310957_50373988	50341928	T T	TCACACA TCACACA	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG01167.hp2 HG01169.hp1 others(45): Show HG00408.hp1 HG01167.hp2 HG01169.hp1 HG01256.hp2 HG01258.hp2 HG01358.hp1 HG01361.hp1 HG02074.hp1 HG02080.hp1 HG02083.hp1 HG02145.hp1 HG02280.hp1 HG02622.hp2 HG02735.hp1 HG02895.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp2 HG02970.hp1 HG02976.hp1 HG03209.hp2 HG03225.hp1 HG03540.hp1 HG03579.hp1 HG03942.hp2 HG04115.hp2 HG04184.hp1 NA18944.hp1 NA18957.hp1 NA18961.hp2 NA18966.hp2 NA18978.hp1 NA18979.hp2 NA18982.hp1 NA18985.hp2 NA18988.hp2 NA18997.hp2 NA18999.hp2 NA19003.hp2 NA19007.hp1 NA19030.hp2 NA19043.hp1 NA19059.hp1 NA19064.hp1 NA19070.hp1 NA19074.hp1 NA19078.hp2 NA19079.hp2	a0001 a0009 a0001 a0009	a0001c0001 a0001c0002 a0009c0010 a0001c0001 a0001c0002 a0009c0010	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(8): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0013 a0001c0001t0017 a0001c0001t0023 a0001c0002t0002 a0001c0002t0019 a0001c0002t0036 a0009c0010t0002	a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0114 others(40): Show a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0114 a0001c0001t0003g0158 a0001c0001t0004g0017 a0001c0001t0004g0151 a0001c0001t0004g0154 a0001c0001t0005g0089 a0001c0001t0005g0121 a0001c0001t0005g0141 a0001c0001t0013g0252 a0001c0001t0013g0254 a0001c0001t0017g0023 a0001c0001t0023g0273 a0001c0002t0002g0022 a0001c0002t0002g0024 a0001c0002t0002g0026 a0001c0002t0002g0281 a0001c0002t0002g0282 a0001c0002t0002g0284 a0001c0002t0002g0286 a0001c0002t0002g0287 a0001c0002t0002g0294 a0001c0002t0002g0295 a0001c0002t0002g0296 a0001c0002t0002g0297 a0001c0002t0002g0307 a0001c0002t0002g0308 a0001c0002t0002g0309 a0001c0002t0002g0321 a0001c0002t0002g0322 a0001c0002t0002g0325 a0001c0002t0002g0328 a0001c0002t0002g0329 a0001c0002t0002g0333 a0001c0002t0002g0346 a0001c0002t0002g0352 a0001c0002t0002g0361 a0001c0002t0019g0279 a0001c0002t0019g0291 a0001c0002t0019g0349 a0001c0002t0036g0310 a0009c0010t0002g0324	48	402	0.1194	6	c.592 others(23): Show c.592-1848_592-1843dupTGTGTG	BRD7	ENSG00000166164.17	transcript	ENST00000394688.8	protein_coding	5/16			chr16	TogoVar
BRD7_chr16_50310957_50373988	50341928	T T	TCTCACA TCTCACA	intron_variant intron_variant	MODIFIER	HG00544.hp1 HG01167.hp1 HG01981.hp1 others(23): Show HG00544.hp1 HG01167.hp1 HG01981.hp1 HG02083.hp2 HG02129.hp2 HG02293.hp2 HG02630.hp2 HG02735.hp2 HG03669.hp2 NA18945.hp1 NA18962.hp1 NA18971.hp2 NA18973.hp1 NA18974.hp2 NA18979.hp1 NA18983.hp2 NA18985.hp1 NA18992.hp1 NA18997.hp1 NA18998.hp2 NA19000.hp1 NA19011.hp1 NA19079.hp1 NA19090.hp2 NA19091.hp1 NA20752.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0007 a0001c0001t0011 others(3): Show a0001c0001t0001 a0001c0001t0007 a0001c0001t0011 a0001c0001t0020 a0001c0001t0022 a0001c0001t0025	a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0012 others(20): Show a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0012 a0001c0001t0001g0030 a0001c0001t0001g0031 a0001c0001t0001g0038 a0001c0001t0001g0054 a0001c0001t0001g0067 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0100 a0001c0001t0001g0107 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0001g0137 a0001c0001t0001g0142 a0001c0001t0007g0064 a0001c0001t0011g0113 a0001c0001t0020g0035 a0001c0001t0022g0073 a0001c0001t0025g0075	26	402	0.0647	6	c.592 others(23): Show c.592-1843_592-1842insTGTGAG	BRD7	ENSG00000166164.17	transcript	ENST00000394688.8	protein_coding	5/16			chr16	TogoVar
BRD7_chr16_50310957_50373988	50363660	T T	TGTGCGC TGTGCGC	intron_variant intron_variant	MODIFIER	HG00544.hp1 HG02738.hp1 NA18974.hp2 others(2): Show HG00544.hp1 HG02738.hp1 NA18974.hp2 NA18995.hp2 NA18998.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0097 a0001c0001t0001g0132 a0001c0001t0001g0135 others(2): Show a0001c0001t0001g0097 a0001c0001t0001g0132 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0001g0137	5	402	0.0124	6	c.258 others(23): Show c.258+4429_258+4430insGCGCAC	BRD7	ENSG00000166164.17	transcript	ENST00000394688.8	protein_coding	2/16			chr16	TogoVar
BRD7_chr16_50310957_50373988	50363660	T T	TGTGTGC TGTGTGC	intron_variant intron_variant	MODIFIER	HG00408.hp2 HG01109.hp1 HG01167.hp1 others(59): Show HG00408.hp2 HG01109.hp1 HG01167.hp1 HG01361.hp2 HG01975.hp2 HG01981.hp1 HG02074.hp2 HG02080.hp2 HG02129.hp2 HG02148.hp2 HG02258.hp1 HG02451.hp1 HG02572.hp2 HG02723.hp2 HG02735.hp2 HG02965.hp1 HG02970.hp1 HG02976.hp1 HG02976.hp2 HG03041.hp2 HG03209.hp1 HG03490.hp1 HG03492.hp1 NA18747.hp1 NA18906.hp2 NA18939.hp2 NA18945.hp1 NA18945.hp2 NA18956.hp1 NA18957.hp2 NA18962.hp1 NA18971.hp2 NA18973.hp1 NA18975.hp2 NA18979.hp1 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18991.hp2 NA18992.hp1 NA18997.hp1 NA19001.hp2 NA19002.hp2 NA19003.hp1 NA19011.hp1 NA19043.hp2 NA19057.hp2 NA19060.hp2 NA19062.hp2 NA19063.hp1 NA19068.hp1 NA19070.hp2 NA19077.hp2 NA19079.hp1 NA19081.hp1 NA19082.hp2 NA19088.hp1 NA19091.hp1 NA19240.hp1 NA20300.hp2 NA20752.hp1 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0007 a0001c0001t0009 others(4): Show a0001c0001t0001 a0001c0001t0007 a0001c0001t0009 a0001c0001t0011 a0001c0001t0022 a0001c0001t0025 a0001c0001t0027	a0001c0001t0001g0001 a0001c0001t0001g0008 a0001c0001t0001g0009 others(47): Show a0001c0001t0001g0001 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0012 a0001c0001t0001g0014 a0001c0001t0001g0030 a0001c0001t0001g0031 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0063 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0134 a0001c0001t0001g0142 a0001c0001t0007g0013 a0001c0001t0007g0062 a0001c0001t0007g0064 a0001c0001t0007g0065 a0001c0001t0009g0011 a0001c0001t0011g0074 a0001c0001t0011g0076 a0001c0001t0022g0072 a0001c0001t0022g0073 a0001c0001t0025g0075 a0001c0001t0027g0051	62	402	0.1542	6	c.258 others(23): Show c.258+4429_258+4430insGCACAC	BRD7	ENSG00000166164.17	transcript	ENST00000394688.8	protein_coding	2/16			chr16	TogoVar
BRD8_chr5_138134770_138183630	138156825	T T	TACACAC TACACAC	intron_variant intron_variant	MODIFIER	HG00408.hp2 HG00558.hp1 HG00558.hp2 others(43): Show HG00408.hp2 HG00558.hp1 HG00558.hp2 HG00609.hp1 HG00609.hp2 HG01891.hp1 HG02015.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp2 HG02258.hp1 HG02258.hp2 HG02523.hp2 HG02818.hp1 HG02895.hp1 HG02922.hp1 HG03195.hp2 HG03225.hp2 HG03927.hp2 HG04228.hp1 NA18522.hp1 NA18906.hp2 NA18941.hp1 NA18955.hp1 NA18963.hp1 NA18963.hp2 NA18968.hp1 NA18970.hp2 NA18971.hp2 NA18974.hp2 NA18977.hp1 NA18987.hp2 NA18989.hp1 NA18992.hp2 NA18995.hp1 NA19001.hp1 NA19004.hp1 NA19005.hp2 NA19007.hp1 NA19058.hp2 NA19060.hp2 NA19063.hp2 NA19065.hp1 NA19075.hp2 NA19088.hp1 NA19090.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0001c0002 a0001c0006 others(1): Show a0001c0001 a0001c0002 a0001c0006 a0004c0005	a0001c0001t0001 a0001c0001t0003 a0001c0002t0001 others(2): Show a0001c0001t0001 a0001c0001t0003 a0001c0002t0001 a0001c0006t0001 a0004c0005t0001	a0001c0001t0001g0010 a0001c0001t0001g0132 a0001c0001t0001g0133 others(42): Show a0001c0001t0001g0010 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0136 a0001c0001t0001g0138 a0001c0001t0001g0212 a0001c0001t0001g0213 a0001c0001t0001g0214 a0001c0001t0001g0222 a0001c0001t0001g0234 a0001c0001t0001g0238 a0001c0001t0001g0242 a0001c0001t0001g0243 a0001c0001t0001g0244 a0001c0001t0001g0249 a0001c0001t0001g0254 a0001c0001t0001g0260 a0001c0001t0001g0261 a0001c0001t0001g0264 a0001c0001t0001g0282 a0001c0001t0001g0292 a0001c0001t0001g0299 a0001c0001t0001g0303 a0001c0001t0001g0305 a0001c0001t0001g0307 a0001c0001t0001g0308 a0001c0001t0001g0309 a0001c0001t0001g0316 a0001c0001t0001g0317 a0001c0001t0001g0320 a0001c0001t0001g0326 a0001c0001t0001g0327 a0001c0001t0001g0330 a0001c0001t0001g0335 a0001c0001t0001g0338 a0001c0001t0001g0339 a0001c0001t0001g0351 a0001c0001t0003g0318 a0001c0002t0001g0091 a0001c0002t0001g0142 a0001c0006t0001g0361 a0001c0006t0001g0362 a0001c0006t0001g0363 a0004c0005t0001g0122 a0004c0005t0001g0125	46	378	0.1217	6	c.257 others(25): Show c.2577+2724_2577+2729dupGTGTGT	BRD8	ENSG00000112983.18	transcript	ENST00000254900.10	protein_coding	20/26			chr5	TogoVar
BRD8_chr5_138134770_138183630	138174156	T T	TTGTGTG TTGTGTG	intron_variant intron_variant	MODIFIER	HG01071.hp2 HG02040.hp1 HG02451.hp1 others(8): Show HG01071.hp2 HG02040.hp1 HG02451.hp1 HG02622.hp1 HG02809.hp2 HG03017.hp1 HG03139.hp2 HG04115.hp2 NA18522.hp1 NA18995.hp1 NA19088.hp1	a0001 a0003 a0008 a0001 a0003 a0008	a0001c0001 a0003c0004 a0008c0015 a0001c0001 a0003c0004 a0008c0015	a0001c0001t0001 a0003c0004t0001 a0008c0015t0001 a0001c0001t0001 a0003c0004t0001 a0008c0015t0001	a0001c0001t0001g0135 a0001c0001t0001g0150 a0001c0001t0001g0259 others(8): Show a0001c0001t0001g0135 a0001c0001t0001g0150 a0001c0001t0001g0259 a0001c0001t0001g0260 a0001c0001t0001g0261 a0001c0001t0001g0262 a0001c0001t0001g0263 a0001c0001t0001g0264 a0001c0001t0001g0338 a0003c0004t0001g0166 a0008c0015t0001g0341	11	378	0.0291	6	c.117 others(23): Show c.117-2028_117-2023dupCACACA	BRD8	ENSG00000112983.18	transcript	ENST00000254900.10	protein_coding	2/26			chr5	TogoVar

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