Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
ADSS1_chr14_104719229_104752310	104736881	G G	GATATAT GATATAT	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00423.hp2 HG00673.hp2 others(13): Show HG00099.hp2 HG00423.hp2 HG00673.hp2 HG01243.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG02922.hp2 NA18959.hp1 NA18974.hp2 NA18998.hp1 NA19010.hp2 NA19057.hp1 NA19086.hp1 NA19087.hp1 NA20752.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 a0001c0001t0001 a0001c0001t0002 a0001c0002t0001	a0001c0001t0001g0106 a0001c0001t0002g0006 a0001c0001t0002g0029 others(9): Show a0001c0001t0001g0106 a0001c0001t0002g0006 a0001c0001t0002g0029 a0001c0001t0002g0055 a0001c0001t0002g0080 a0001c0001t0002g0105 a0001c0001t0002g0121 a0001c0001t0002g0122 a0001c0001t0002g0267 a0001c0001t0002g0268 a0001c0001t0002g0286 a0001c0002t0001g0287	16	402	0.0398	6	c.296 others(23): Show c.296-1468_296-1463dupATATAT	ADSS1	ENSG00000185100.12	transcript	ENST00000330877.7	protein_coding	2/12		INFO_REALIGN_3_PRIME	chr14	TogoVar
ADSS2_chr1_244403494_244456909	244435168	C C	CAAAAAA CAAAAAA	intron_variant intron_variant	MODIFIER	HG03540.hp2 NA18977.hp1 NA18979.hp2 others(3): Show HG03540.hp2 NA18977.hp1 NA18979.hp2 NA19001.hp1 NA19005.hp1 NA19083.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004	a0001c0001t0002g0166 a0001c0001t0002g0183 a0001c0001t0002g0189 others(3): Show a0001c0001t0002g0166 a0001c0001t0002g0183 a0001c0001t0002g0189 a0001c0001t0003g0151 a0001c0001t0003g0152 a0001c0001t0004g0108	6	408	0.0147	6	c.355 others(23): Show c.355+1651_355+1656dupTTTTTT	ADSS2	ENSG00000035687.10	transcript	ENST00000366535.4	protein_coding	3/12			chr1	TogoVar
AEBP2_chr12_19434492_19527227	19497328	G G	GTTTTTT GTTTTTT	intron_variant intron_variant	MODIFIER	HG00609.hp2 HG01243.hp2 HG02027.hp2 others(16): Show HG00609.hp2 HG01243.hp2 HG02027.hp2 HG02055.hp1 HG02080.hp2 HG02486.hp1 HG02615.hp2 HG02809.hp2 HG03195.hp2 HG03492.hp1 HG03516.hp1 HG03710.hp2 NA18612.hp2 NA18963.hp1 NA18972.hp2 NA19007.hp2 NA19030.hp2 NA19079.hp2 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(7): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 a0001c0001t0011 a0001c0001t0017 a0001c0001t0021 a0001c0001t0025 a0001c0002t0001 a0001c0002t0002	a0001c0001t0001g0095 a0001c0001t0001g0121 a0001c0001t0001g0241 others(16): Show a0001c0001t0001g0095 a0001c0001t0001g0121 a0001c0001t0001g0241 a0001c0001t0001g0253 a0001c0001t0002g0206 a0001c0001t0004g0268 a0001c0001t0004g0271 a0001c0001t0004g0294 a0001c0001t0004g0296 a0001c0001t0004g0300 a0001c0001t0004g0302 a0001c0001t0005g0140 a0001c0001t0011g0301 a0001c0001t0017g0043 a0001c0001t0017g0044 a0001c0001t0021g0269 a0001c0001t0025g0288 a0001c0002t0001g0086 a0001c0002t0002g0144	19	404	0.0470	6	c.117 others(25): Show c.1175-2750_1175-2745dupTTTTTT	AEBP2	ENSG00000139154.16	transcript	ENST00000266508.14	protein_coding	4/7		INFO_REALIGN_3_PRIME	chr12	TogoVar
AEBP2_chr12_19434492_19527227	19501797	G G	GTTTGTT GTTTGTT	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG01106.hp2 HG02027.hp2 others(15): Show HG00558.hp1 HG01106.hp2 HG02027.hp2 HG02738.hp2 HG03654.hp1 HG04199.hp1 NA18948.hp2 NA18956.hp1 NA18959.hp2 NA18963.hp1 NA18972.hp2 NA18973.hp1 NA18992.hp2 NA19005.hp2 NA19007.hp2 NA19064.hp2 NA19079.hp2 NA19086.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0011 a0001c0001t0021 a0001c0001t0004 a0001c0001t0011 a0001c0001t0021	a0001c0001t0004g0004 a0001c0001t0004g0268 a0001c0001t0004g0271 others(15): Show a0001c0001t0004g0004 a0001c0001t0004g0268 a0001c0001t0004g0271 a0001c0001t0004g0274 a0001c0001t0004g0277 a0001c0001t0004g0278 a0001c0001t0004g0284 a0001c0001t0004g0285 a0001c0001t0004g0287 a0001c0001t0004g0289 a0001c0001t0004g0291 a0001c0001t0004g0292 a0001c0001t0004g0296 a0001c0001t0004g0298 a0001c0001t0004g0300 a0001c0001t0011g0295 a0001c0001t0021g0269 a0001c0001t0021g0270	18	404	0.0446	6	c.129 others(25): Show c.1299+1579_1299+1580insGTTTTT	AEBP2	ENSG00000139154.16	transcript	ENST00000266508.14	protein_coding	5/7		INFO_REALIGN_3_PRIME	chr12	TogoVar
AEBP2_chr12_19434492_19527227	19501797	G G	GTTTTTT GTTTTTT	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG00438.hp1 HG00639.hp1 others(36): Show HG00323.hp2 HG00438.hp1 HG00639.hp1 HG01069.hp2 HG01071.hp1 HG01099.hp1 HG01109.hp2 HG01175.hp1 HG01261.hp1 HG01496.hp1 HG01515.hp2 HG02300.hp2 HG02630.hp1 HG02896.hp1 HG03017.hp2 HG03239.hp1 HG03453.hp1 HG03490.hp2 HG03492.hp2 HG03654.hp2 HG03710.hp1 HG03942.hp1 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04228.hp2 NA18906.hp1 NA18944.hp2 NA18965.hp1 NA18967.hp2 NA18974.hp2 NA18979.hp1 NA18988.hp1 NA19005.hp1 NA20300.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0004 a0001c0001t0006 others(7): Show a0001c0001t0003 a0001c0001t0004 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0014 a0001c0001t0028 a0001c0001t0030 a0001c0001t0039 a0001c0001t0048	a0001c0001t0003g0311 a0001c0001t0003g0321 a0001c0001t0003g0323 others(36): Show a0001c0001t0003g0311 a0001c0001t0003g0321 a0001c0001t0003g0323 a0001c0001t0003g0350 a0001c0001t0003g0368 a0001c0001t0003g0375 a0001c0001t0003g0378 a0001c0001t0003g0379 a0001c0001t0003g0380 a0001c0001t0003g0390 a0001c0001t0004g0317 a0001c0001t0004g0318 a0001c0001t0006g0005 a0001c0001t0006g0008 a0001c0001t0006g0010 a0001c0001t0006g0012 a0001c0001t0006g0013 a0001c0001t0006g0015 a0001c0001t0006g0016 a0001c0001t0006g0017 a0001c0001t0006g0019 a0001c0001t0006g0021 a0001c0001t0006g0024 a0001c0001t0006g0026 a0001c0001t0006g0028 a0001c0001t0007g0389 a0001c0001t0007g0393 a0001c0001t0008g0325 a0001c0001t0008g0327 a0001c0001t0008g0332 a0001c0001t0008g0372 a0001c0001t0008g0382 a0001c0001t0014g0020 a0001c0001t0014g0025 a0001c0001t0014g0027 a0001c0001t0028g0308 a0001c0001t0030g0349 a0001c0001t0039g0023 a0001c0001t0048g0377	39	404	0.0965	6	c.129 others(25): Show c.1299+1591_1299+1596dupTTTTTT	AEBP2	ENSG00000139154.16	transcript	ENST00000266508.14	protein_coding	5/7		INFO_REALIGN_3_PRIME	chr12	TogoVar
AFAP1L1_chr5_149266859_149348637	149267303	A A	ACTCGTT ACTCGTT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18965.hp2 NA18973.hp2 NA18983.hp1 NA18965.hp2 NA18973.hp2 NA18983.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0004 a0001c0001t0002 a0001c0001t0004	a0001c0001t0002g0078 a0001c0001t0002g0079 a0001c0001t0004g0064 a0001c0001t0002g0078 a0001c0001t0002g0079 a0001c0001t0004g0064	3	286	0.0105	6	c.-46 others(17): Show c.-4666_-4665insCTCGTT	AFAP1L1	ENSG00000157510.14	transcript	ENST00000296721.9	protein_coding		4555		chr5	TogoVar
AFAP1L1_chr5_149266859_149348637	149267303	A A	ACTCTTT ACTCTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00140.hp2 HG00438.hp1 HG00558.hp1 others(119): Show HG00140.hp2 HG00438.hp1 HG00558.hp1 HG00597.hp1 HG00621.hp2 HG00735.hp1 HG00738.hp2 HG00741.hp2 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp2 HG01099.hp2 HG01123.hp2 HG01168.hp2 HG01175.hp1 HG01192.hp2 HG01255.hp2 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01515.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp2 HG01934.hp1 HG01934.hp2 HG01981.hp1 HG02040.hp1 HG02055.hp1 HG02071.hp1 HG02071.hp2 HG02083.hp2 HG02129.hp1 HG02129.hp2 HG02257.hp1 HG02451.hp1 HG02559.hp1 HG02602.hp2 HG02615.hp2 HG02622.hp2 HG02647.hp2 HG02683.hp1 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02723.hp1 HG02818.hp1 HG02886.hp1 HG02922.hp1 HG02922.hp2 HG02976.hp1 HG02976.hp2 HG03041.hp1 HG03098.hp2 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp1 HG03453.hp1 HG03453.hp2 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03579.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG04115.hp1 HG04115.hp2 HG04199.hp1 NA18612.hp1 NA18612.hp2 NA18906.hp1 NA18944.hp1 NA18946.hp1 NA18952.hp1 NA18954.hp1 NA18955.hp2 NA18960.hp1 NA18960.hp2 NA18961.hp2 NA18963.hp2 NA18969.hp1 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18974.hp2 NA18981.hp2 NA18982.hp1 NA18983.hp2 NA18986.hp1 NA18987.hp1 NA18987.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19001.hp1 NA19001.hp2 NA19002.hp2 NA19003.hp1 NA19004.hp1 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19011.hp1 NA19043.hp1 NA19058.hp1 NA19063.hp1 NA19063.hp2 NA19068.hp2 NA19087.hp1 NA19087.hp2 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20805.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0004 a0005 a0006	a0001c0001 a0001c0003 a0001c0011 others(6): Show a0001c0001 a0001c0003 a0001c0011 a0002c0002 a0003c0005 a0003c0008 a0004c0004 a0005c0006 a0006c0007	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(25): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0008 a0001c0001t0011 a0001c0001t0012 a0001c0001t0014 a0001c0001t0015 a0001c0001t0016 a0001c0001t0018 a0001c0001t0019 a0001c0001t0021 a0001c0001t0024 a0001c0001t0025 a0001c0001t0026 a0001c0003t0002 a0001c0003t0004 a0001c0011t0002 a0002c0002t0003 a0003c0005t0002 a0003c0008t0002 a0004c0004t0001 a0004c0004t0022 a0005c0006t0001 a0006c0007t0010	a0001c0001t0001g0020 a0001c0001t0001g0043 a0001c0001t0001g0048 others(117): Show a0001c0001t0001g0020 a0001c0001t0001g0043 a0001c0001t0001g0048 a0001c0001t0001g0057 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0080 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0088 a0001c0001t0001g0089 a0001c0001t0001g0091 a0001c0001t0001g0094 a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0001g0099 a0001c0001t0001g0100 a0001c0001t0001g0101 a0001c0001t0001g0110 a0001c0001t0001g0112 a0001c0001t0001g0113 a0001c0001t0001g0115 a0001c0001t0001g0117 a0001c0001t0001g0118 a0001c0001t0001g0121 a0001c0001t0001g0122 a0001c0001t0001g0128 a0001c0001t0001g0130 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0136 a0001c0001t0001g0145 a0001c0001t0001g0154 a0001c0001t0001g0155 a0001c0001t0001g0173 a0001c0001t0001g0181 a0001c0001t0001g0184 a0001c0001t0001g0185 a0001c0001t0001g0187 a0001c0001t0001g0189 a0001c0001t0001g0209 a0001c0001t0001g0243 a0001c0001t0002g0042 a0001c0001t0002g0050 a0001c0001t0002g0065 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0102 a0001c0001t0002g0103 a0001c0001t0002g0106 a0001c0001t0002g0107 a0001c0001t0002g0108 a0001c0001t0002g0109 a0001c0001t0002g0114 a0001c0001t0002g0119 a0001c0001t0002g0120 a0001c0001t0002g0125 a0001c0001t0002g0127 a0001c0001t0002g0129 a0001c0001t0002g0132 a0001c0001t0002g0135 a0001c0001t0002g0149 a0001c0001t0002g0150 a0001c0001t0002g0166 a0001c0001t0002g0167 a0001c0001t0002g0169 a0001c0001t0002g0178 a0001c0001t0002g0179 a0001c0001t0002g0180 a0001c0001t0002g0183 a0001c0001t0003g0096 a0001c0001t0003g0123 a0001c0001t0003g0140 a0001c0001t0004g0077 a0001c0001t0004g0081 a0001c0001t0004g0090 a0001c0001t0004g0092 a0001c0001t0004g0105 a0001c0001t0004g0131 a0001c0001t0005g0003 a0001c0001t0005g0138 a0001c0001t0005g0182 a0001c0001t0005g0186 a0001c0001t0006g0168 a0001c0001t0006g0172 a0001c0001t0006g0190 a0001c0001t0008g0126 a0001c0001t0008g0153 a0001c0001t0011g0045 a0001c0001t0011g0046 a0001c0001t0011g0141 a0001c0001t0012g0188 a0001c0001t0014g0004 a0001c0001t0015g0116 a0001c0001t0016g0139 a0001c0001t0018g0165 a0001c0001t0019g0095 a0001c0001t0021g0170 a0001c0001t0024g0177 a0001c0001t0025g0124 a0001c0001t0026g0093 a0001c0003t0002g0215 a0001c0003t0004g0137 a0001c0011t0002g0104 a0002c0002t0003g0171 a0003c0005t0002g0268 a0003c0008t0002g0267 a0004c0004t0001g0191 a0004c0004t0022g0174 a0005c0006t0001g0156 a0005c0006t0001g0159 a0006c0007t0010g0152	122	286	0.4266	6	c.-46 others(17): Show c.-4666_-4665insCTCTTT	AFAP1L1	ENSG00000157510.14	transcript	ENST00000296721.9	protein_coding		4555		chr5	TogoVar
AFAP1L1_chr5_149266859_149348637	149271794	G G	GGCGGGC GGCGGGC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01243.hp1 HG02723.hp2 HG02809.hp2 others(1): Show HG01243.hp1 HG02723.hp2 HG02809.hp2 HG03225.hp2	a0001 a0002 a0006 others(1): Show a0001 a0002 a0006 a0009	a0001c0001 a0002c0002 a0006c0007 others(1): Show a0001c0001 a0002c0002 a0006c0007 a0009c0012	a0001c0001t0003 a0002c0002t0003 a0006c0007t0008 others(1): Show a0001c0001t0003 a0002c0002t0003 a0006c0007t0008 a0009c0012t0010	a0001c0001t0003g0062 a0002c0002t0003g0063 a0006c0007t0008g0060 others(1): Show a0001c0001t0003g0062 a0002c0002t0003g0063 a0006c0007t0008g0060 a0009c0012t0010g0061	4	286	0.0140	6	c.-17 others(15): Show c.-175_-174insGCGGGC	AFAP1L1	ENSG00000157510.14	transcript	ENST00000296721.9	protein_coding		64		chr5	TogoVar
AFAP1L1_chr5_149266859_149348637	149275442	T T	TTTCTTC TTTCTTC	intron_variant intron_variant	MODIFIER	HG01433.hp2 HG01496.hp2 HG01928.hp1 others(6): Show HG01433.hp2 HG01496.hp2 HG01928.hp1 HG01978.hp1 HG02004.hp1 HG02293.hp2 HG06807.hp1 NA18974.hp2 NA18994.hp2	a0001 a0007 a0001 a0007	a0001c0001 a0007c0010 a0001c0001 a0007c0010	a0001c0001t0001 a0007c0010t0002 a0001c0001t0001 a0007c0010t0002	a0001c0001t0001g0002 a0001c0001t0001g0142 a0001c0001t0001g0143 others(5): Show a0001c0001t0001g0002 a0001c0001t0001g0142 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0147 a0007c0010t0002g0148	9	286	0.0315	6	c.16+ others(21): Show c.16+3471_16+3476dupTTCTTC	AFAP1L1	ENSG00000157510.14	transcript	ENST00000296721.9	protein_coding	1/18		INFO_REALIGN_3_PRIME	chr5	TogoVar
AFAP1L2_chr10_114289824_114409502	114327147	T T	TTATATA TTATATA	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG02683.hp2 NA19043.hp2 HG00140.hp2 HG02683.hp2 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0004 a0001c0002t0003 a0001c0001t0001 a0001c0001t0004 a0001c0002t0003	a0001c0001t0001g0179 a0001c0001t0004g0016 a0001c0002t0003g0007 a0001c0001t0001g0179 a0001c0001t0004g0016 a0001c0002t0003g0007	3	262	0.0115	6	c.316 others(23): Show c.316-3892_316-3887dupTATATA	AFAP1L2	ENSG00000169129.16	transcript	ENST00000304129.9	protein_coding	4/18			chr10	TogoVar
AFAP1L2_chr10_114289824_114409502	114352479	T T	TAAAAAA TAAAAAA	intron_variant intron_variant	MODIFIER	HG01070.hp2 HG01168.hp1 HG01168.hp2 others(7): Show HG01070.hp2 HG01168.hp1 HG01168.hp2 HG02145.hp2 HG02451.hp1 HG02809.hp2 HG02965.hp1 NA18941.hp2 NA18957.hp1 NA19030.hp2	a0001 a0003 a0004 others(1): Show a0001 a0003 a0004 a0008	a0001c0001 a0001c0002 a0001c0003 others(3): Show a0001c0001 a0001c0002 a0001c0003 a0003c0007 a0004c0009 a0008c0033	a0001c0001t0001 a0001c0001t0004 a0001c0002t0002 others(4): Show a0001c0001t0001 a0001c0001t0004 a0001c0002t0002 a0001c0003t0002 a0003c0007t0006 a0004c0009t0009 a0008c0033t0003	a0001c0001t0001g0139 a0001c0001t0001g0172 a0001c0001t0001g0203 others(7): Show a0001c0001t0001g0139 a0001c0001t0001g0172 a0001c0001t0001g0203 a0001c0001t0004g0122 a0001c0001t0004g0230 a0001c0002t0002g0255 a0001c0003t0002g0042 a0003c0007t0006g0251 a0004c0009t0009g0009 a0008c0033t0003g0034	10	262	0.0382	6	c.17- others(23): Show c.17-11754_17-11749dupTTTTTT	AFAP1L2	ENSG00000169129.16	transcript	ENST00000304129.9	protein_coding	1/18			chr10	TogoVar
AFAP1L2_chr10_114289824_114409502	114355254	C C	CTTTTTT CTTTTTT	intron_variant intron_variant	MODIFIER	HG02145.hp2 NA18522.hp2 NA18906.hp2 others(1): Show HG02145.hp2 NA18522.hp2 NA18906.hp2 NA19030.hp2	a0001 a0004 a0008 others(1): Show a0001 a0004 a0008 a0011	a0001c0001 a0004c0013 a0008c0033 others(1): Show a0001c0001 a0004c0013 a0008c0033 a0011c0025	a0001c0001t0001 a0004c0013t0009 a0008c0033t0003 others(1): Show a0001c0001t0001 a0004c0013t0009 a0008c0033t0003 a0011c0025t0022	a0001c0001t0001g0203 a0004c0013t0009g0020 a0008c0033t0003g0034 others(1): Show a0001c0001t0001g0203 a0004c0013t0009g0020 a0008c0033t0003g0034 a0011c0025t0022g0234	4	262	0.0153	6	c.17- others(23): Show c.17-14524_17-14523insAAAAAA	AFAP1L2	ENSG00000169129.16	transcript	ENST00000304129.9	protein_coding	1/18			chr10	TogoVar
AFAP1_chr4_7753714_7944861	7807203	A A	AAAAAAC AAAAAAC	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG01070.hp1 HG01106.hp2 others(35): Show HG00140.hp2 HG01070.hp1 HG01106.hp2 HG01109.hp2 HG01168.hp1 HG01256.hp2 HG01257.hp1 HG01258.hp2 HG01496.hp2 HG01891.hp1 HG01891.hp2 HG01934.hp2 HG01952.hp2 HG01981.hp2 HG02004.hp2 HG02109.hp1 HG02148.hp2 HG02257.hp1 HG02273.hp1 HG02615.hp2 HG02630.hp1 HG02647.hp1 HG02818.hp2 HG02895.hp1 HG02922.hp2 HG02965.hp2 HG02976.hp1 HG03130.hp1 HG03195.hp1 HG03471.hp2 HG03579.hp2 HG03834.hp2 HG04115.hp2 NA18964.hp2 NA19240.hp2 NA20300.hp2 NA20805.hp1 NA20905.hp1	a0002 a0005 a0008 a0002 a0005 a0008	a0002c0005 a0002c0008 a0002c0035 others(4): Show a0002c0005 a0002c0008 a0002c0035 a0002c0039 a0002c0040 a0005c0018 a0008c0042	a0002c0005t0004 a0002c0005t0033 a0002c0005t0035 others(11): Show a0002c0005t0004 a0002c0005t0033 a0002c0005t0035 a0002c0005t0063 a0002c0005t0064 a0002c0008t0004 a0002c0008t0031 a0002c0008t0054 a0002c0008t0055 a0002c0035t0001 a0002c0039t0072 a0002c0040t0073 a0005c0018t0004 a0008c0042t0004	a0002c0005t0004g0012 a0002c0005t0004g0213 a0002c0005t0004g0216 others(35): Show a0002c0005t0004g0012 a0002c0005t0004g0213 a0002c0005t0004g0216 a0002c0005t0004g0217 a0002c0005t0004g0218 a0002c0005t0004g0219 a0002c0005t0004g0230 a0002c0005t0004g0244 a0002c0005t0004g0266 a0002c0005t0004g0275 a0002c0005t0004g0280 a0002c0005t0004g0285 a0002c0005t0004g0297 a0002c0005t0004g0298 a0002c0005t0004g0306 a0002c0005t0004g0307 a0002c0005t0004g0308 a0002c0005t0033g0010 a0002c0005t0033g0011 a0002c0005t0035g0317 a0002c0005t0035g0318 a0002c0005t0063g0015 a0002c0005t0064g0245 a0002c0008t0004g0146 a0002c0008t0004g0147 a0002c0008t0004g0149 a0002c0008t0004g0151 a0002c0008t0004g0152 a0002c0008t0031g0288 a0002c0008t0031g0289 a0002c0008t0054g0148 a0002c0008t0055g0133 a0002c0035t0001g0257 a0002c0039t0072g0314 a0002c0040t0073g0315 a0005c0018t0004g0214 a0005c0018t0004g0215 a0008c0042t0004g0231	38	318	0.1195	6	c.105 others(25): Show c.1054+2405_1054+2410dupGTTTTT	AFAP1	ENSG00000196526.11	transcript	ENST00000420658.6	protein_coding	9/17			chr4	TogoVar
AFAP1_chr4_7753714_7944861	7824424	T T	TACACAC TACACAC	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01884.hp1 HG02258.hp1 others(3): Show HG01109.hp1 HG01884.hp1 HG02258.hp1 HG03209.hp1 NA18522.hp2 NA20129.hp1	a0001 a0003 a0001 a0003	a0001c0003 a0001c0012 a0003c0027 a0001c0003 a0001c0012 a0003c0027	a0001c0003t0017 a0001c0012t0018 a0003c0027t0005 a0001c0003t0017 a0001c0012t0018 a0003c0027t0005	a0001c0003t0017g0206 a0001c0003t0017g0207 a0001c0012t0018g0199 others(3): Show a0001c0003t0017g0206 a0001c0003t0017g0207 a0001c0012t0018g0199 a0001c0012t0018g0201 a0001c0012t0018g0203 a0003c0027t0005g0138	6	318	0.0189	6	c.727 others(23): Show c.727-5259_727-5254dupGTGTGT	AFAP1	ENSG00000196526.11	transcript	ENST00000420658.6	protein_coding	6/17			chr4	TogoVar
AFAP1_chr4_7753714_7944861	7827569	C C	CAAAAAA CAAAAAA	intron_variant intron_variant	MODIFIER	HG01433.hp1 HG02071.hp1 HG02572.hp2 others(7): Show HG01433.hp1 HG02071.hp1 HG02572.hp2 HG03195.hp2 HG03471.hp1 HG03491.hp2 HG03492.hp1 NA18960.hp2 NA19005.hp1 NA19056.hp1	a0001 a0001	a0001c0002 a0001c0004 a0001c0022 others(1): Show a0001c0002 a0001c0004 a0001c0022 a0001c0031	a0001c0002t0034 a0001c0004t0007 a0001c0004t0008 others(2): Show a0001c0002t0034 a0001c0004t0007 a0001c0004t0008 a0001c0022t0024 a0001c0031t0071	a0001c0002t0034g0292 a0001c0004t0007g0302 a0001c0004t0008g0237 others(7): Show a0001c0002t0034g0292 a0001c0004t0007g0302 a0001c0004t0008g0237 a0001c0004t0008g0238 a0001c0004t0008g0247 a0001c0004t0008g0276 a0001c0004t0008g0293 a0001c0004t0008g0295 a0001c0022t0024g0135 a0001c0031t0071g0313	10	318	0.0315	6	c.727 others(23): Show c.727-8404_727-8399dupTTTTTT	AFAP1	ENSG00000196526.11	transcript	ENST00000420658.6	protein_coding	6/17			chr4	TogoVar
AFAP1_chr4_7753714_7944861	7834092	T T	TACACAC TACACAC	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG01070.hp2 HG01256.hp1 others(22): Show HG00639.hp2 HG01070.hp2 HG01256.hp1 HG01433.hp2 HG02071.hp1 HG02083.hp1 HG02109.hp2 HG02155.hp1 HG02572.hp1 HG02818.hp1 HG02965.hp1 HG02976.hp2 HG03139.hp2 HG03540.hp1 HG03927.hp2 HG04115.hp1 NA18906.hp1 NA18947.hp2 NA18960.hp2 NA18994.hp1 NA19005.hp1 NA19056.hp1 NA19068.hp1 NA19090.hp1 NA19240.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0001c0002 a0001c0003 others(3): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0016 a0003c0041	a0001c0001t0001 a0001c0001t0010 a0001c0001t0025 others(8): Show a0001c0001t0001 a0001c0001t0010 a0001c0001t0025 a0001c0001t0027 a0001c0001t0043 a0001c0002t0003 a0001c0002t0030 a0001c0003t0002 a0001c0004t0008 a0001c0016t0003 a0003c0041t0005	a0001c0001t0001g0168 a0001c0001t0001g0193 a0001c0001t0010g0061 others(22): Show a0001c0001t0001g0168 a0001c0001t0001g0193 a0001c0001t0010g0061 a0001c0001t0010g0062 a0001c0001t0010g0077 a0001c0001t0025g0019 a0001c0001t0025g0069 a0001c0001t0027g0071 a0001c0001t0027g0072 a0001c0001t0043g0070 a0001c0002t0003g0100 a0001c0002t0030g0013 a0001c0002t0030g0018 a0001c0003t0002g0173 a0001c0003t0002g0183 a0001c0003t0002g0196 a0001c0003t0002g0204 a0001c0003t0002g0208 a0001c0004t0008g0247 a0001c0004t0008g0276 a0001c0004t0008g0293 a0001c0004t0008g0295 a0001c0004t0008g0300 a0001c0016t0003g0233 a0003c0041t0005g0094	25	318	0.0786	6	c.726 others(23): Show c.726+4426_726+4431dupGTGTGT	AFAP1	ENSG00000196526.11	transcript	ENST00000420658.6	protein_coding	6/17			chr4	TogoVar
AFAP1_chr4_7753714_7944861	7898808	A A	AGTGTGT AGTGTGT	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG00621.hp1 HG01081.hp1 others(51): Show HG00423.hp1 HG00621.hp1 HG01081.hp1 HG01109.hp1 HG01168.hp2 HG01516.hp2 HG01884.hp1 HG01891.hp2 HG01943.hp1 HG01993.hp2 HG02004.hp1 HG02080.hp2 HG02257.hp2 HG02258.hp1 HG02572.hp1 HG02615.hp1 HG02622.hp1 HG02922.hp1 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03139.hp1 HG03209.hp1 HG03688.hp2 HG03704.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 NA18522.hp2 NA18612.hp2 NA18944.hp1 NA18945.hp2 NA18954.hp1 NA18956.hp1 NA18963.hp1 NA18963.hp2 NA18971.hp2 NA18977.hp2 NA18982.hp1 NA18994.hp1 NA18999.hp1 NA19007.hp1 NA19011.hp2 NA19012.hp2 NA19043.hp1 NA19056.hp2 NA19065.hp2 NA19068.hp1 NA19079.hp1 NA19084.hp1 NA19085.hp2 NA19086.hp1 NA20300.hp2 NA20905.hp2	a0001 a0003 a0005 a0001 a0003 a0005	a0001c0001 a0001c0003 a0001c0004 others(8): Show a0001c0001 a0001c0003 a0001c0004 a0001c0009 a0001c0012 a0001c0014 a0001c0030 a0001c0044 a0001c0045 a0003c0028 a0005c0018	a0001c0001t0001 a0001c0001t0014 a0001c0003t0002 others(14): Show a0001c0001t0001 a0001c0001t0014 a0001c0003t0002 a0001c0003t0005 a0001c0003t0017 a0001c0003t0020 a0001c0003t0056 a0001c0004t0006 a0001c0004t0065 a0001c0009t0041 a0001c0012t0018 a0001c0014t0015 a0001c0030t0038 a0001c0044t0032 a0001c0045t0001 a0003c0028t0005 a0005c0018t0004	a0001c0001t0001g0155 a0001c0001t0014g0065 a0001c0003t0002g0021 others(51): Show a0001c0001t0001g0155 a0001c0001t0014g0065 a0001c0003t0002g0021 a0001c0003t0002g0023 a0001c0003t0002g0024 a0001c0003t0002g0026 a0001c0003t0002g0033 a0001c0003t0002g0034 a0001c0003t0002g0156 a0001c0003t0002g0158 a0001c0003t0002g0160 a0001c0003t0002g0162 a0001c0003t0002g0169 a0001c0003t0002g0171 a0001c0003t0002g0172 a0001c0003t0002g0174 a0001c0003t0002g0175 a0001c0003t0002g0176 a0001c0003t0002g0179 a0001c0003t0002g0183 a0001c0003t0002g0184 a0001c0003t0002g0196 a0001c0003t0002g0197 a0001c0003t0002g0204 a0001c0003t0002g0205 a0001c0003t0002g0208 a0001c0003t0002g0256 a0001c0003t0005g0161 a0001c0003t0005g0165 a0001c0003t0005g0170 a0001c0003t0005g0185 a0001c0003t0005g0186 a0001c0003t0005g0187 a0001c0003t0017g0206 a0001c0003t0017g0207 a0001c0003t0020g0180 a0001c0003t0020g0181 a0001c0003t0020g0182 a0001c0003t0056g0025 a0001c0004t0006g0260 a0001c0004t0006g0261 a0001c0004t0065g0200 a0001c0009t0041g0202 a0001c0012t0018g0199 a0001c0012t0018g0201 a0001c0012t0018g0203 a0001c0014t0015g0163 a0001c0014t0015g0194 a0001c0030t0038g0259 a0001c0044t0032g0227 a0001c0045t0001g0022 a0003c0028t0005g0188 a0005c0018t0004g0214 a0005c0018t0004g0215	54	318	0.1698	6	c.-2- others(23): Show c.-2-26734_-2-26729dupACACAC	AFAP1	ENSG00000196526.11	transcript	ENST00000420658.6	protein_coding	1/17			chr4	TogoVar
AFAP1_chr4_7753714_7944861	7921181	C C	CTTTTTT CTTTTTT	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG01934.hp1 HG02027.hp1 others(8): Show HG00423.hp2 HG01934.hp1 HG02027.hp1 HG02080.hp1 HG03453.hp2 NA18522.hp2 NA18944.hp1 NA18977.hp1 NA19063.hp2 NA19064.hp1 NA19066.hp1	a0001 a0001	a0001c0001 a0001c0009 a0001c0012 a0001c0001 a0001c0009 a0001c0012	a0001c0001t0001 a0001c0001t0014 a0001c0001t0046 others(2): Show a0001c0001t0001 a0001c0001t0014 a0001c0001t0046 a0001c0009t0042 a0001c0012t0018	a0001c0001t0001g0006 a0001c0001t0001g0045 a0001c0001t0001g0079 others(8): Show a0001c0001t0001g0006 a0001c0001t0001g0045 a0001c0001t0001g0079 a0001c0001t0001g0084 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0001g0155 a0001c0001t0014g0056 a0001c0001t0046g0080 a0001c0009t0042g0229 a0001c0012t0018g0199	11	318	0.0346	6	c.-3+ others(23): Show c.-3+18469_-3+18474dupAAAAAA	AFAP1	ENSG00000196526.11	transcript	ENST00000420658.6	protein_coding	1/17			chr4	TogoVar
AFAP1_chr4_7753714_7944861	7925853	A A	AAAAAAG AAAAAAG	intron_variant intron_variant	MODIFIER	HG00558.hp2 HG01934.hp1 HG01978.hp1 others(4): Show HG00558.hp2 HG01934.hp1 HG01978.hp1 HG02273.hp2 NA18950.hp1 NA19085.hp1 NA19090.hp2	a0001 a0001	a0001c0001 a0001c0011 a0001c0001 a0001c0011	a0001c0001t0001 a0001c0001t0023 a0001c0011t0016 a0001c0001t0001 a0001c0001t0023 a0001c0011t0016	a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0045 others(4): Show a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0045 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0023g0119 a0001c0011t0016g0046	7	318	0.0220	6	c.-3+ others(23): Show c.-3+13802_-3+13803insCTTTTT	AFAP1	ENSG00000196526.11	transcript	ENST00000420658.6	protein_coding	1/17			chr4	TogoVar
AFDN_chr6_167821911_167977023	167821960	T T	TACACAC TACACAC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00408.hp1 HG00438.hp1 HG00735.hp2 others(17): Show HG00408.hp1 HG00438.hp1 HG00735.hp2 HG01257.hp2 HG01258.hp2 HG01358.hp1 HG02027.hp1 HG02109.hp2 HG02300.hp1 HG02717.hp1 HG03098.hp1 HG03688.hp2 HG03710.hp1 NA18944.hp2 NA18972.hp1 NA18995.hp1 NA19004.hp2 NA19060.hp2 NA19066.hp1 NA19075.hp2	a0001 a0005 a0001 a0005	a0001c0001 a0001c0002 a0001c0003 others(3): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0005c0008	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(6): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0002t0001 a0001c0003t0001 a0001c0004t0001 a0001c0005t0001 a0001c0005t0015 a0005c0008t0002	a0001c0001t0001g0215 a0001c0001t0002g0033 a0001c0001t0002g0264 others(17): Show a0001c0001t0001g0215 a0001c0001t0002g0033 a0001c0001t0002g0264 a0001c0001t0002g0270 a0001c0001t0003g0217 a0001c0001t0003g0219 a0001c0002t0001g0165 a0001c0002t0001g0193 a0001c0003t0001g0029 a0001c0004t0001g0224 a0001c0005t0001g0042 a0001c0005t0001g0056 a0001c0005t0001g0063 a0001c0005t0001g0075 a0001c0005t0001g0081 a0001c0005t0001g0084 a0001c0005t0015g0074 a0005c0008t0002g0248 a0005c0008t0002g0252 a0005c0008t0002g0253	20	326	0.0614	6	c.-51 others(17): Show c.-5173_-5172insACACAC	AFDN	ENSG00000130396.22	transcript	ENST00000683244.1	protein_coding		4950		chr6	TogoVar
AFDN_chr6_167821911_167977023	167844177	A A	AGTGTGT AGTGTGT	intron_variant intron_variant	MODIFIER	HG02622.hp2 HG02976.hp2 HG03471.hp1 others(1): Show HG02622.hp2 HG02976.hp2 HG03471.hp1 NA19030.hp1	a0001 a0002 a0012 a0001 a0002 a0012	a0001c0006 a0002c0029 a0012c0023 a0001c0006 a0002c0029 a0012c0023	a0001c0006t0001 a0002c0029t0001 a0012c0023t0011 a0001c0006t0001 a0002c0029t0001 a0012c0023t0011	a0001c0006t0001g0314 a0001c0006t0001g0316 a0002c0029t0001g0323 others(1): Show a0001c0006t0001g0314 a0001c0006t0001g0316 a0002c0029t0001g0323 a0012c0023t0011g0272	4	326	0.0123	6	c.105 others(25): Show c.105+16977_105+16982dupGTGTGT	AFDN	ENSG00000130396.22	transcript	ENST00000683244.1	protein_coding	1/33		INFO_REALIGN_3_PRIME	chr6	TogoVar
AFDN_chr6_167821911_167977023	167891404	G G	GGTGTGT GGTGTGT	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00423.hp1 HG00558.hp2 others(21): Show HG00280.hp1 HG00423.hp1 HG00558.hp2 HG00735.hp1 HG01515.hp1 HG02080.hp1 HG02132.hp1 HG02523.hp1 HG02602.hp1 HG02965.hp1 HG03490.hp1 HG03834.hp1 HG03834.hp2 NA18941.hp1 NA18953.hp2 NA18964.hp1 NA18968.hp1 NA18979.hp2 NA18981.hp1 NA18982.hp1 NA18987.hp2 NA18995.hp1 NA19067.hp2 NA19085.hp1	a0001 a0001	a0001c0003 a0001c0005 a0001c0003 a0001c0005	a0001c0003t0001 a0001c0005t0001 a0001c0003t0001 a0001c0005t0001	a0001c0003t0001g0009 a0001c0003t0001g0012 a0001c0003t0001g0013 others(20): Show a0001c0003t0001g0009 a0001c0003t0001g0012 a0001c0003t0001g0013 a0001c0003t0001g0018 a0001c0003t0001g0019 a0001c0003t0001g0032 a0001c0003t0001g0044 a0001c0003t0001g0060 a0001c0003t0001g0068 a0001c0003t0001g0069 a0001c0003t0001g0070 a0001c0003t0001g0073 a0001c0003t0001g0076 a0001c0003t0001g0090 a0001c0003t0001g0097 a0001c0003t0001g0190 a0001c0003t0001g0205 a0001c0005t0001g0002 a0001c0005t0001g0048 a0001c0005t0001g0054 a0001c0005t0001g0065 a0001c0005t0001g0084 a0001c0005t0001g0085	24	326	0.0736	6	c.117 others(23): Show c.1177+378_1177+379insTGTGTG	AFDN	ENSG00000130396.22	transcript	ENST00000683244.1	protein_coding	8/33		INFO_REALIGN_3_PRIME	chr6	TogoVar
AFDN_chr6_167821911_167977023	167897642	C C	CTTTTTT CTTTTTT	intron_variant intron_variant	MODIFIER	HG00597.hp1 HG01891.hp1 HG01934.hp1 others(18): Show HG00597.hp1 HG01891.hp1 HG01934.hp1 HG01978.hp2 HG02074.hp1 HG02273.hp2 HG02622.hp1 HG03098.hp1 HG03225.hp2 HG03688.hp2 NA18946.hp1 NA18957.hp1 NA18979.hp1 NA18983.hp2 NA18985.hp2 NA18988.hp1 NA19004.hp2 NA19030.hp2 NA19074.hp1 NA19079.hp2 NA19084.hp2	a0001 a0002 a0011 a0001 a0002 a0011	a0001c0001 a0001c0012 a0002c0013 others(1): Show a0001c0001 a0001c0012 a0002c0013 a0011c0018	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0012t0003 a0002c0013t0002 a0011c0018t0002	a0001c0001t0001g0215 a0001c0001t0001g0216 a0001c0001t0002g0095 others(18): Show a0001c0001t0001g0215 a0001c0001t0001g0216 a0001c0001t0002g0095 a0001c0001t0002g0107 a0001c0001t0002g0220 a0001c0001t0002g0221 a0001c0001t0002g0230 a0001c0001t0002g0233 a0001c0001t0002g0237 a0001c0001t0002g0256 a0001c0001t0002g0257 a0001c0001t0002g0262 a0001c0001t0002g0264 a0001c0001t0002g0266 a0001c0001t0002g0268 a0001c0001t0002g0270 a0001c0001t0003g0218 a0001c0001t0004g0187 a0001c0012t0003g0279 a0002c0013t0002g0267 a0011c0018t0002g0239	21	326	0.0644	6	c.131 others(23): Show c.1318-543_1318-538dupTTTTTT	AFDN	ENSG00000130396.22	transcript	ENST00000683244.1	protein_coding	10/33		INFO_REALIGN_3_PRIME	chr6	TogoVar
AFDN_chr6_167821911_167977023	167950392	C C	CTGTGTG CTGTGTG	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG00597.hp1 HG00609.hp2 others(75): Show HG00438.hp2 HG00597.hp1 HG00609.hp2 HG00639.hp2 HG01069.hp1 HG01071.hp2 HG01109.hp1 HG01109.hp2 HG01168.hp1 HG01192.hp2 HG01257.hp2 HG01258.hp2 HG01261.hp1 HG01346.hp2 HG01358.hp1 HG01884.hp1 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG01978.hp2 HG01993.hp2 HG02004.hp2 HG02056.hp2 HG02071.hp2 HG02074.hp1 HG02080.hp2 HG02109.hp2 HG02145.hp2 HG02155.hp2 HG02273.hp2 HG02293.hp1 HG02300.hp1 HG02451.hp2 HG02572.hp2 HG02602.hp2 HG02615.hp2 HG02717.hp1 HG02809.hp2 HG02818.hp2 HG02970.hp2 HG03041.hp2 HG03098.hp1 HG03225.hp2 HG03471.hp2 HG03490.hp2 HG03491.hp2 HG03492.hp2 HG03654.hp2 HG03669.hp1 HG03688.hp2 HG03942.hp1 NA18939.hp2 NA18941.hp2 NA18943.hp2 NA18946.hp1 NA18954.hp2 NA18961.hp2 NA18968.hp2 NA18970.hp2 NA18971.hp1 NA18972.hp2 NA18975.hp1 NA18979.hp1 NA18981.hp2 NA18982.hp2 NA18983.hp2 NA18985.hp2 NA18987.hp1 NA18988.hp1 NA18992.hp2 NA19004.hp2 NA19009.hp1 NA19030.hp2 NA19064.hp2 NA19074.hp1 NA19084.hp2 NA20805.hp1 NA21309.hp1	a0001 a0002 a0005 others(2): Show a0001 a0002 a0005 a0008 a0011	a0001c0001 a0001c0007 a0001c0010 others(5): Show a0001c0001 a0001c0007 a0001c0010 a0002c0013 a0002c0017 a0005c0008 a0008c0020 a0011c0018	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(11): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0014 a0001c0001t0016 a0001c0007t0005 a0001c0010t0001 a0002c0013t0001 a0002c0013t0002 a0002c0017t0005 a0005c0008t0002 a0008c0020t0002 a0011c0018t0002	a0001c0001t0001g0001 a0001c0001t0001g0215 a0001c0001t0001g0216 others(74): Show a0001c0001t0001g0001 a0001c0001t0001g0215 a0001c0001t0001g0216 a0001c0001t0002g0004 a0001c0001t0002g0033 a0001c0001t0002g0040 a0001c0001t0002g0095 a0001c0001t0002g0107 a0001c0001t0002g0123 a0001c0001t0002g0179 a0001c0001t0002g0180 a0001c0001t0002g0181 a0001c0001t0002g0182 a0001c0001t0002g0183 a0001c0001t0002g0184 a0001c0001t0002g0188 a0001c0001t0002g0214 a0001c0001t0002g0222 a0001c0001t0002g0223 a0001c0001t0002g0226 a0001c0001t0002g0227 a0001c0001t0002g0228 a0001c0001t0002g0230 a0001c0001t0002g0232 a0001c0001t0002g0233 a0001c0001t0002g0234 a0001c0001t0002g0235 a0001c0001t0002g0236 a0001c0001t0002g0237 a0001c0001t0002g0238 a0001c0001t0002g0240 a0001c0001t0002g0241 a0001c0001t0002g0242 a0001c0001t0002g0243 a0001c0001t0002g0244 a0001c0001t0002g0245 a0001c0001t0002g0246 a0001c0001t0002g0247 a0001c0001t0002g0250 a0001c0001t0002g0251 a0001c0001t0002g0254 a0001c0001t0002g0255 a0001c0001t0002g0256 a0001c0001t0002g0257 a0001c0001t0002g0258 a0001c0001t0002g0261 a0001c0001t0002g0262 a0001c0001t0002g0264 a0001c0001t0002g0265 a0001c0001t0002g0266 a0001c0001t0002g0268 a0001c0001t0002g0269 a0001c0001t0002g0270 a0001c0001t0002g0308 a0001c0001t0003g0096 a0001c0001t0003g0198 a0001c0001t0003g0199 a0001c0001t0003g0217 a0001c0001t0003g0218 a0001c0001t0003g0219 a0001c0001t0004g0185 a0001c0001t0004g0186 a0001c0001t0004g0187 a0001c0001t0014g0094 a0001c0001t0016g0197 a0001c0007t0005g0273 a0001c0010t0001g0099 a0001c0010t0001g0101 a0001c0010t0001g0102 a0002c0013t0001g0034 a0002c0013t0002g0267 a0002c0017t0005g0285 a0005c0008t0002g0248 a0005c0008t0002g0252 a0005c0008t0002g0253 a0008c0020t0002g0259 a0011c0018t0002g0239	78	326	0.2393	6	c.383 others(23): Show c.3832-789_3832-788insGTGTGT	AFDN	ENSG00000130396.22	transcript	ENST00000683244.1	protein_coding	29/33		INFO_REALIGN_3_PRIME	chr6	TogoVar
AFDN_chr6_167821911_167977023	167964614	C C	CTGTGTG CTGTGTG	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG01168.hp2 HG01978.hp2 others(7): Show HG00741.hp1 HG01168.hp2 HG01978.hp2 HG02273.hp2 HG02293.hp1 HG03654.hp1 HG04199.hp1 HG04204.hp2 NA18939.hp1 NA19066.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0002t0001 a0001c0001t0002 a0001c0002t0001	a0001c0001t0002g0230 a0001c0001t0002g0241 a0001c0001t0002g0262 others(7): Show a0001c0001t0002g0230 a0001c0001t0002g0241 a0001c0001t0002g0262 a0001c0002t0001g0114 a0001c0002t0001g0141 a0001c0002t0001g0145 a0001c0002t0001g0146 a0001c0002t0001g0148 a0001c0002t0001g0153 a0001c0002t0001g0193	10	326	0.0307	6	c.496 others(25): Show c.4969-1101_4969-1096dupGTGTGT	AFDN	ENSG00000130396.22	transcript	ENST00000683244.1	protein_coding	31/33		INFO_REALIGN_3_PRIME	chr6	TogoVar
AFF1_chr4_86930011_87146039	86949521	A A	AATTATT AATTATT	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG00673.hp2 HG00738.hp1 others(20): Show HG00558.hp1 HG00673.hp2 HG00738.hp1 HG01069.hp2 HG01099.hp1 HG01167.hp2 HG01168.hp2 HG01169.hp2 HG01361.hp2 HG01516.hp2 HG02129.hp1 HG03195.hp1 NA18747.hp2 NA18968.hp2 NA18977.hp1 NA18998.hp1 NA19001.hp2 NA19009.hp2 NA19011.hp2 NA19058.hp2 NA19060.hp2 NA19081.hp1 NA19088.hp1	a0001 a0006 a0001 a0006	a0001c0001 a0006c0031 a0001c0001 a0006c0031	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(7): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0007 a0001c0001t0012 a0001c0001t0014 a0001c0001t0025 a0001c0001t0031 a0001c0001t0051 a0006c0031t0010	a0001c0001t0001g0119 a0001c0001t0001g0143 a0001c0001t0001g0144 others(20): Show a0001c0001t0001g0119 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0146 a0001c0001t0001g0163 a0001c0001t0001g0164 a0001c0001t0001g0168 a0001c0001t0001g0170 a0001c0001t0001g0292 a0001c0001t0002g0160 a0001c0001t0003g0002 a0001c0001t0003g0008 a0001c0001t0003g0009 a0001c0001t0003g0011 a0001c0001t0007g0004 a0001c0001t0007g0145 a0001c0001t0012g0128 a0001c0001t0014g0126 a0001c0001t0014g0137 a0001c0001t0025g0003 a0001c0001t0031g0129 a0001c0001t0051g0109 a0006c0031t0010g0162	23	294	0.0782	6	c.38+ others(19): Show c.38+963_38+968dupATTATT	AFF1	ENSG00000172493.23	transcript	ENST00000395146.9	protein_coding	2/20		INFO_REALIGN_3_PRIME	chr4	TogoVar
AFF1_chr4_86930011_87146039	86949537	A A	ATTATTT ATTATTT	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00280.hp2 HG00738.hp2 others(23): Show HG00140.hp1 HG00280.hp2 HG00738.hp2 HG01071.hp2 HG01243.hp2 HG01993.hp2 HG02015.hp1 HG02083.hp2 HG02135.hp1 HG02148.hp1 HG03239.hp1 NA18612.hp2 NA18944.hp2 NA18951.hp2 NA18953.hp2 NA18959.hp1 NA18961.hp2 NA18970.hp2 NA18981.hp1 NA18985.hp1 NA18992.hp2 NA19056.hp1 NA19057.hp2 NA19066.hp1 NA20752.hp2 homoSapiens_chm13v2.hp1	a0001 a0009 a0001 a0009	a0001c0001 a0009c0024 a0001c0001 a0009c0024	a0001c0001t0001 a0001c0001t0004 a0001c0001t0012 others(6): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0012 a0001c0001t0031 a0001c0001t0035 a0001c0001t0047 a0001c0001t0048 a0001c0001t0059 a0009c0024t0001	a0001c0001t0001g0124 a0001c0001t0001g0132 a0001c0001t0001g0138 others(23): Show a0001c0001t0001g0124 a0001c0001t0001g0132 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0147 a0001c0001t0001g0149 a0001c0001t0001g0151 a0001c0001t0001g0152 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0166 a0001c0001t0001g0167 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0004g0155 a0001c0001t0012g0135 a0001c0001t0031g0131 a0001c0001t0035g0264 a0001c0001t0047g0148 a0001c0001t0048g0134 a0001c0001t0059g0130 a0009c0024t0001g0150	26	294	0.0884	6	c.38+ others(19): Show c.38+968_38+969insATTTTT	AFF1	ENSG00000172493.23	transcript	ENST00000395146.9	protein_coding	2/20		INFO_REALIGN_3_PRIME	chr4	TogoVar
AFF1_chr4_86930011_87146039	86951616	T T	TTTTTTC TTTTTTC	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02257.hp1 HG02258.hp1 others(18): Show HG01891.hp2 HG02257.hp1 HG02258.hp1 HG02451.hp2 HG02486.hp2 HG02572.hp2 HG02818.hp1 HG02895.hp1 HG02897.hp2 HG02922.hp2 HG02965.hp1 HG03139.hp1 HG03209.hp1 HG03486.hp1 HG03540.hp1 HG03579.hp1 HG06807.hp1 NA18522.hp1 NA18522.hp2 NA18906.hp2 NA21309.hp2	a0001 a0002 a0010 a0001 a0002 a0010	a0001c0001 a0001c0002 a0001c0004 others(3): Show a0001c0001 a0001c0002 a0001c0004 a0001c0017 a0002c0008 a0010c0015	a0001c0001t0003 a0001c0001t0011 a0001c0001t0017 others(7): Show a0001c0001t0003 a0001c0001t0011 a0001c0001t0017 a0001c0002t0005 a0001c0002t0044 a0001c0004t0023 a0001c0017t0005 a0002c0008t0021 a0002c0008t0042 a0010c0015t0055	a0001c0001t0003g0192 a0001c0001t0011g0094 a0001c0001t0011g0265 others(18): Show a0001c0001t0003g0192 a0001c0001t0011g0094 a0001c0001t0011g0265 a0001c0001t0011g0266 a0001c0001t0011g0267 a0001c0001t0017g0095 a0001c0001t0017g0096 a0001c0002t0005g0193 a0001c0002t0005g0194 a0001c0002t0005g0196 a0001c0002t0005g0197 a0001c0002t0005g0198 a0001c0002t0005g0199 a0001c0002t0005g0249 a0001c0002t0044g0195 a0001c0004t0023g0250 a0001c0017t0005g0097 a0002c0008t0021g0014 a0002c0008t0021g0016 a0002c0008t0042g0015 a0010c0015t0055g0012	21	294	0.0714	6	c.38+ others(21): Show c.38+3050_38+3051insCTTTTT	AFF1	ENSG00000172493.23	transcript	ENST00000395146.9	protein_coding	2/20		INFO_REALIGN_3_PRIME	chr4	TogoVar
AFF1_chr4_86930011_87146039	86985181	C C	CTATATA CTATATA	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02145.hp2 HG02922.hp2 others(1): Show HG02109.hp1 HG02145.hp2 HG02922.hp2 HG02976.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0007 a0001c0001 a0001c0002 a0001c0007	a0001c0001t0003 a0001c0002t0005 a0001c0007t0008 a0001c0001t0003 a0001c0002t0005 a0001c0007t0008	a0001c0001t0003g0239 a0001c0002t0005g0197 a0001c0007t0008g0210 others(1): Show a0001c0001t0003g0239 a0001c0002t0005g0197 a0001c0007t0008g0210 a0001c0007t0008g0237	4	294	0.0136	6	c.38+ others(23): Show c.38+36639_38+36644dupTATATA	AFF1	ENSG00000172493.23	transcript	ENST00000395146.9	protein_coding	2/20		INFO_REALIGN_3_PRIME	chr4	TogoVar
AFF1_chr4_86930011_87146039	86998098	C C	CAAAAAA CAAAAAA	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG01192.hp1 HG01256.hp2 others(12): Show HG00140.hp2 HG01192.hp1 HG01256.hp2 HG02040.hp1 HG02132.hp1 HG02559.hp1 HG02698.hp1 HG02738.hp1 NA18965.hp1 NA18971.hp1 NA18988.hp2 NA18998.hp2 NA18999.hp2 NA19055.hp2 NA19070.hp2	a0001 a0003 a0012 a0001 a0003 a0012	a0001c0001 a0001c0005 a0003c0012 others(1): Show a0001c0001 a0001c0005 a0003c0012 a0012c0021	a0001c0001t0004 a0001c0001t0009 a0001c0001t0029 others(4): Show a0001c0001t0004 a0001c0001t0009 a0001c0001t0029 a0001c0001t0030 a0001c0005t0041 a0003c0012t0004 a0012c0021t0030	a0001c0001t0004g0028 a0001c0001t0004g0123 a0001c0001t0004g0202 others(12): Show a0001c0001t0004g0028 a0001c0001t0004g0123 a0001c0001t0004g0202 a0001c0001t0004g0204 a0001c0001t0004g0212 a0001c0001t0004g0213 a0001c0001t0004g0238 a0001c0001t0009g0208 a0001c0001t0009g0230 a0001c0001t0009g0233 a0001c0001t0029g0236 a0001c0001t0030g0234 a0001c0005t0041g0175 a0003c0012t0004g0121 a0012c0021t0030g0231	15	294	0.0510	6	c.39- others(23): Show c.39-48044_39-48039dupAAAAAA	AFF1	ENSG00000172493.23	transcript	ENST00000395146.9	protein_coding	2/20		INFO_REALIGN_3_PRIME	chr4	TogoVar
AFF1_chr4_86930011_87146039	87000603	C C	CTGTGTG CTGTGTG	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00741.hp1 HG01069.hp1 others(9): Show HG00323.hp1 HG00741.hp1 HG01069.hp1 HG01071.hp1 HG01099.hp2 HG01496.hp2 HG01981.hp1 HG02738.hp2 HG03669.hp2 HG03834.hp1 HG03942.hp2 NA20905.hp2	a0001 a0015 a0001 a0015	a0001c0001 a0001c0010 a0015c0022 a0001c0001 a0001c0010 a0015c0022	a0001c0001t0002 a0001c0001t0006 a0001c0001t0007 others(3): Show a0001c0001t0002 a0001c0001t0006 a0001c0001t0007 a0001c0010t0006 a0001c0010t0054 a0015c0022t0006	a0001c0001t0002g0072 a0001c0001t0006g0073 a0001c0001t0006g0074 others(9): Show a0001c0001t0002g0072 a0001c0001t0006g0073 a0001c0001t0006g0074 a0001c0001t0006g0075 a0001c0001t0006g0076 a0001c0001t0006g0086 a0001c0001t0006g0106 a0001c0001t0006g0107 a0001c0001t0007g0081 a0001c0010t0006g0083 a0001c0010t0054g0084 a0015c0022t0006g0087	12	294	0.0408	6	c.39- others(23): Show c.39-45562_39-45561insGTGTGT	AFF1	ENSG00000172493.23	transcript	ENST00000395146.9	protein_coding	2/20		INFO_REALIGN_3_PRIME	chr4	TogoVar
AFF1_chr4_86930011_87146039	87000605	C C	CTGTGTG CTGTGTG	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00323.hp2 HG00738.hp1 others(18): Show HG00280.hp1 HG00323.hp2 HG00738.hp1 HG00741.hp2 HG01069.hp2 HG01099.hp1 HG01167.hp2 HG01168.hp2 HG01169.hp1 HG01361.hp1 HG01516.hp2 HG02080.hp1 HG02486.hp1 HG02647.hp2 HG02976.hp2 HG04204.hp1 NA18959.hp2 NA19001.hp1 NA19058.hp1 NA19077.hp2 NA19085.hp2	a0001 a0007 a0008 a0001 a0007 a0008	a0001c0001 a0001c0003 a0001c0028 others(2): Show a0001c0001 a0001c0003 a0001c0028 a0007c0029 a0008c0027	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(6): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0007 a0001c0001t0025 a0001c0003t0028 a0001c0028t0002 a0007c0029t0038 a0008c0027t0003	a0001c0001t0001g0090 a0001c0001t0002g0025 a0001c0001t0002g0036 others(18): Show a0001c0001t0001g0090 a0001c0001t0002g0025 a0001c0001t0002g0036 a0001c0001t0002g0037 a0001c0001t0002g0050 a0001c0001t0002g0052 a0001c0001t0002g0059 a0001c0001t0003g0002 a0001c0001t0003g0007 a0001c0001t0003g0008 a0001c0001t0003g0009 a0001c0001t0003g0011 a0001c0001t0003g0027 a0001c0001t0003g0032 a0001c0001t0003g0069 a0001c0001t0007g0004 a0001c0001t0025g0003 a0001c0003t0028g0286 a0001c0028t0002g0038 a0007c0029t0038g0001 a0008c0027t0003g0045	21	294	0.0714	6	c.39- others(23): Show c.39-45530_39-45525dupTGTGTG	AFF1	ENSG00000172493.23	transcript	ENST00000395146.9	protein_coding	2/20		INFO_REALIGN_3_PRIME	chr4	TogoVar
AFF1_chr4_86930011_87146039	87022588	C C	CTGTGTG CTGTGTG	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00738.hp2 HG01168.hp1 others(3): Show HG00140.hp1 HG00738.hp2 HG01168.hp1 HG01169.hp2 HG02486.hp2 NA20752.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0012 a0001c0001t0017 a0001c0001t0001 a0001c0001t0012 a0001c0001t0017	a0001c0001t0001g0154 a0001c0001t0001g0156 a0001c0001t0001g0157 others(3): Show a0001c0001t0001g0154 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0012g0127 a0001c0001t0012g0128 a0001c0001t0017g0095	6	294	0.0204	6	c.39- others(23): Show c.39-23577_39-23576insGTGTGT	AFF1	ENSG00000172493.23	transcript	ENST00000395146.9	protein_coding	2/20		INFO_REALIGN_3_PRIME	chr4	TogoVar
AFF1_chr4_86930011_87146039	87022592	A A	ATATATC ATATATC	intron_variant intron_variant	MODIFIER	HG01433.hp2 HG02056.hp2 HG02630.hp1 others(4): Show HG01433.hp2 HG02056.hp2 HG02630.hp1 NA18951.hp2 NA18977.hp1 NA18994.hp2 NA19009.hp2	a0001 a0001	a0001c0001 a0001c0025 a0001c0001 a0001c0025	a0001c0001t0001 a0001c0001t0004 a0001c0025t0003 a0001c0001t0001 a0001c0001t0004 a0001c0025t0003	a0001c0001t0001g0046 a0001c0001t0001g0143 a0001c0001t0001g0164 others(4): Show a0001c0001t0001g0046 a0001c0001t0001g0143 a0001c0001t0001g0164 a0001c0001t0001g0167 a0001c0001t0001g0169 a0001c0001t0004g0159 a0001c0025t0003g0111	7	294	0.0238	6	c.39- others(23): Show c.39-23573_39-23572insATATCT	AFF1	ENSG00000172493.23	transcript	ENST00000395146.9	protein_coding	2/20		INFO_REALIGN_3_PRIME	chr4	TogoVar
AFF1_chr4_86930011_87146039	87122881	T T	TAAAAAA TAAAAAA	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG01361.hp2 HG01517.hp1 others(15): Show HG00280.hp2 HG01361.hp2 HG01517.hp1 HG01884.hp1 HG01978.hp1 HG02015.hp1 HG02056.hp2 HG02083.hp2 HG02257.hp2 HG02647.hp1 HG03041.hp1 HG03225.hp2 NA18981.hp1 NA19001.hp2 NA19058.hp2 NA19070.hp1 NA19083.hp2 homoSapiens_chm13v2.hp1	a0001 a0009 a0001 a0009	a0001c0001 a0001c0006 a0009c0024 a0001c0001 a0001c0006 a0009c0024	a0001c0001t0001 a0001c0001t0008 a0001c0001t0014 others(4): Show a0001c0001t0001 a0001c0001t0008 a0001c0001t0014 a0001c0001t0016 a0001c0001t0031 a0001c0006t0008 a0009c0024t0001	a0001c0001t0001g0034 a0001c0001t0001g0077 a0001c0001t0001g0125 others(15): Show a0001c0001t0001g0034 a0001c0001t0001g0077 a0001c0001t0001g0125 a0001c0001t0001g0133 a0001c0001t0001g0139 a0001c0001t0001g0142 a0001c0001t0001g0152 a0001c0001t0001g0163 a0001c0001t0001g0165 a0001c0001t0001g0169 a0001c0001t0001g0292 a0001c0001t0008g0115 a0001c0001t0014g0126 a0001c0001t0016g0099 a0001c0001t0016g0100 a0001c0001t0031g0131 a0001c0006t0008g0184 a0009c0024t0001g0150	18	294	0.0612	6	c.246 others(25): Show c.2467-2136_2467-2131dupAAAAAA	AFF1	ENSG00000172493.23	transcript	ENST00000395146.9	protein_coding	12/20		INFO_REALIGN_3_PRIME	chr4	TogoVar
AFF2_chrX_148495617_149005663	148500637	T T	TGCCGCC TGCCGCC	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00639.hp1 HG00738.hp1 HG01256.hp1 others(16): Show HG00639.hp1 HG00738.hp1 HG01256.hp1 HG02129.hp1 HG02258.hp1 HG02451.hp1 HG02622.hp1 NA18522.hp1 NA18948.hp1 NA18953.hp1 NA18959.hp1 NA18962.hp1 NA18966.hp1 NA19062.hp1 NA19091.hp1 NA19240.hp1 NA20129.hp1 NA20300.hp1 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(1): Show a0001c0001 a0001c0002 a0001c0003 a0001c0007	a0001c0001t0002 a0001c0001t0015 a0001c0001t0016 others(7): Show a0001c0001t0002 a0001c0001t0015 a0001c0001t0016 a0001c0001t0017 a0001c0001t0076 a0001c0001t0077 a0001c0002t0018 a0001c0002t0078 a0001c0003t0079 a0001c0007t0080	a0001c0001t0002g0020 a0001c0001t0002g0029 a0001c0001t0002g0054 others(16): Show a0001c0001t0002g0020 a0001c0001t0002g0029 a0001c0001t0002g0054 a0001c0001t0002g0062 a0001c0001t0002g0085 a0001c0001t0002g0166 a0001c0001t0015g0032 a0001c0001t0015g0060 a0001c0001t0016g0154 a0001c0001t0016g0155 a0001c0001t0017g0040 a0001c0001t0017g0145 a0001c0001t0076g0153 a0001c0001t0077g0095 a0001c0002t0018g0151 a0001c0002t0018g0156 a0001c0002t0078g0152 a0001c0003t0079g0161 a0001c0007t0080g0162	19	169	0.1124	6	c.-41 others(15): Show c.-419_-414dupCGCCGC	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/21	413	INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148521374	G G	GCACACA GCACACA	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00639.hp2 HG00673.hp1 others(26): Show HG00140.hp1 HG00639.hp2 HG00673.hp1 HG01099.hp1 HG01106.hp1 HG01255.hp1 HG01261.hp1 HG01978.hp1 HG02071.hp1 HG02257.hp1 HG02257.hp2 HG02572.hp1 HG02622.hp2 HG02809.hp2 HG02886.hp1 HG02886.hp2 HG02896.hp1 HG03098.hp1 HG03130.hp1 HG03654.hp1 HG03942.hp1 HG04228.hp1 HG06807.hp1 NA18953.hp1 NA18966.hp1 NA19056.hp1 NA20129.hp2 NA21309.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(2): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(26): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0001t0006 a0001c0001t0011 a0001c0001t0015 a0001c0001t0033 a0001c0001t0048 a0001c0001t0050 a0001c0001t0053 a0001c0001t0055 a0001c0001t0056 a0001c0001t0057 a0001c0001t0066 a0001c0001t0071 a0001c0001t0074 a0001c0001t0083 a0001c0001t0084 a0001c0001t0086 a0001c0001t0089 a0001c0002t0022 a0001c0002t0040 a0001c0002t0082 a0001c0002t0102 a0001c0002t0108 a0001c0003t0028 a0001c0004t0075 a0001c0004t0095 a0001c0005t0023	a0001c0001t0001g0082 a0001c0001t0002g0029 a0001c0001t0005g0009 others(26): Show a0001c0001t0001g0082 a0001c0001t0002g0029 a0001c0001t0005g0009 a0001c0001t0006g0120 a0001c0001t0011g0112 a0001c0001t0015g0032 a0001c0001t0033g0083 a0001c0001t0048g0013 a0001c0001t0050g0026 a0001c0001t0053g0027 a0001c0001t0055g0025 a0001c0001t0056g0023 a0001c0001t0057g0135 a0001c0001t0066g0015 a0001c0001t0071g0028 a0001c0001t0074g0033 a0001c0001t0083g0024 a0001c0001t0084g0030 a0001c0001t0086g0031 a0001c0001t0089g0110 a0001c0002t0022g0003 a0001c0002t0040g0111 a0001c0002t0082g0016 a0001c0002t0102g0094 a0001c0002t0108g0002 a0001c0003t0028g0005 a0001c0004t0075g0004 a0001c0004t0095g0113 a0001c0005t0023g0129	29	169	0.1716	6	c.47+ others(23): Show c.47+20262_47+20267dupACACAC	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20		INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148574943	G G	GGTGTGT GGTGTGT	intron_variant intron_variant	MODIFIER	HG02976.hp1 HG02976.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0032 a0001c0002t0032	a0001c0002t0032g0114 a0001c0002t0032g0114	1	169	0.0059	6	c.47+ others(23): Show c.47+73837_47+73842dupTGTGTG	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20		INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148581193	A A	ATATACG ATATACG	intron_variant intron_variant	MODIFIER	HG02280.hp2 HG02280.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0091 a0001c0002t0091	a0001c0002t0091g0136 a0001c0002t0091g0136	1	169	0.0059	6	c.48- others(23): Show c.48-70794_48-70789dupGTATAC	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20		INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148581283	T T	TACACAC TACACAC	intron_variant intron_variant	MODIFIER	HG02280.hp1 HG02896.hp2 NA19240.hp2 HG02280.hp1 HG02896.hp2 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0038 a0001c0002t0054 a0001c0003t0112 a0001c0001t0038 a0001c0002t0054 a0001c0003t0112	a0001c0001t0038g0102 a0001c0002t0054g0133 a0001c0003t0112g0130 a0001c0001t0038g0102 a0001c0002t0054g0133 a0001c0003t0112g0130	3	169	0.0178	6	c.48- others(23): Show c.48-70715_48-70714insCACACA	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20		INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148581303	C C	CACACGT CACACGT	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG01106.hp1 HG02735.hp1 others(6): Show HG00140.hp1 HG01106.hp1 HG02735.hp1 HG02738.hp1 HG02818.hp2 HG04199.hp1 HG04228.hp1 NA18962.hp1 NA18989.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0005 a0001c0001t0007 others(5): Show a0001c0001t0001 a0001c0001t0005 a0001c0001t0007 a0001c0001t0015 a0001c0001t0037 a0001c0001t0083 a0001c0001t0084 a0001c0001t0085	a0001c0001t0001g0076 a0001c0001t0001g0082 a0001c0001t0005g0001 others(6): Show a0001c0001t0001g0076 a0001c0001t0001g0082 a0001c0001t0005g0001 a0001c0001t0007g0089 a0001c0001t0015g0060 a0001c0001t0037g0037 a0001c0001t0083g0024 a0001c0001t0084g0030 a0001c0001t0085g0167	9	169	0.0533	6	c.48- others(23): Show c.48-70695_48-70694insCACGTA	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20		INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148581356	A A	ACACACG ACACACG	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG01934.hp1 HG02451.hp2 others(2): Show HG01884.hp2 HG01934.hp1 HG02451.hp2 HG03540.hp2 HG06807.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0010 a0001c0001t0098 a0001c0002t0031 others(1): Show a0001c0001t0010 a0001c0001t0098 a0001c0002t0031 a0001c0003t0028	a0001c0001t0010g0115 a0001c0001t0010g0116 a0001c0001t0098g0119 others(2): Show a0001c0001t0010g0115 a0001c0001t0010g0116 a0001c0001t0098g0119 a0001c0002t0031g0148 a0001c0003t0028g0005	5	169	0.0296	6	c.48- others(23): Show c.48-70643_48-70642insCACACG	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20			chrX	TogoVar
AFF2_chrX_148495617_149005663	148581358	A A	ATACACG ATACACG	intron_variant intron_variant	MODIFIER	HG01099.hp1 HG01255.hp1 HG02027.hp1 others(9): Show HG01099.hp1 HG01255.hp1 HG02027.hp1 HG02135.hp1 HG03041.hp2 NA18940.hp1 NA18970.hp1 NA18984.hp1 NA18995.hp1 NA19012.hp1 NA19079.hp1 NA19085.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0008 a0001c0001t0012 others(8): Show a0001c0001t0001 a0001c0001t0008 a0001c0001t0012 a0001c0001t0014 a0001c0001t0024 a0001c0001t0053 a0001c0001t0065 a0001c0001t0067 a0001c0001t0071 a0001c0001t0088 a0001c0002t0072	a0001c0001t0001g0039 a0001c0001t0001g0070 a0001c0001t0008g0051 others(9): Show a0001c0001t0001g0039 a0001c0001t0001g0070 a0001c0001t0008g0051 a0001c0001t0012g0168 a0001c0001t0014g0055 a0001c0001t0024g0093 a0001c0001t0053g0027 a0001c0001t0065g0056 a0001c0001t0067g0057 a0001c0001t0071g0028 a0001c0001t0088g0104 a0001c0002t0072g0018	12	169	0.0710	6	c.48- others(23): Show c.48-70639_48-70638insCACGTA	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20		INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148581358	A A	ATATACG ATATACG	intron_variant intron_variant	MODIFIER	HG03486.hp2 HG03486.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0105 a0001c0002t0105	a0001c0002t0105g0117 a0001c0002t0105g0117	1	169	0.0059	6	c.48- others(23): Show c.48-70633_48-70628dupATACGT	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20		INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148581415	T T	TATATAC TATATAC	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG02895.hp1 HG03041.hp1 others(2): Show HG02145.hp1 HG02895.hp1 HG03041.hp1 HG03486.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0022 a0001c0001t0046 a0001c0001t0106 others(2): Show a0001c0001t0022 a0001c0001t0046 a0001c0001t0106 a0001c0002t0094 a0001c0003t0109	a0001c0001t0022g0134 a0001c0001t0046g0165 a0001c0001t0106g0121 others(2): Show a0001c0001t0022g0134 a0001c0001t0046g0165 a0001c0001t0106g0121 a0001c0002t0094g0106 a0001c0003t0109g0122	5	169	0.0296	6	c.48- others(23): Show c.48-70583_48-70582insTATACA	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20		INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148581439	C C	CACACGT CACACGT	intron_variant intron_variant	MODIFIER	HG02896.hp1 HG02896.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0095 a0001c0004t0095	a0001c0004t0095g0113 a0001c0004t0095g0113	1	169	0.0059	6	c.48- others(23): Show c.48-70559_48-70558insCACGTA	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20		INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148581592	A A	ATACACG ATACACG	intron_variant intron_variant	MODIFIER	HG02129.hp1 HG02602.hp1 HG03017.hp1 others(2): Show HG02129.hp1 HG02602.hp1 HG03017.hp1 NA18977.hp1 NA19005.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0009 others(1): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0009 a0001c0001t0013	a0001c0001t0002g0054 a0001c0001t0003g0063 a0001c0001t0009g0142 others(2): Show a0001c0001t0002g0054 a0001c0001t0003g0063 a0001c0001t0009g0142 a0001c0001t0009g0143 a0001c0001t0013g0034	5	169	0.0296	6	c.48- others(23): Show c.48-70405_48-70404insCACGTA	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20		INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148581592	A A	ATATACG ATATACG	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00621.hp1 HG00673.hp1 others(15): Show HG00140.hp1 HG00621.hp1 HG00673.hp1 HG01106.hp1 HG02258.hp1 HG02630.hp2 HG02738.hp1 HG02818.hp1 HG02818.hp2 HG03130.hp1 HG04199.hp1 HG04228.hp1 NA18940.hp1 NA19063.hp1 NA19070.hp1 NA20129.hp2 NA20752.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0007 a0001c0001 a0001c0002 a0001c0007	a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 others(11): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 a0001c0001t0007 a0001c0001t0037 a0001c0001t0083 a0001c0001t0084 a0001c0001t0086 a0001c0001t0120 a0001c0002t0009 a0001c0002t0022 a0001c0002t0029 a0001c0002t0108 a0001c0007t0080	a0001c0001t0001g0070 a0001c0001t0001g0082 a0001c0001t0003g0042 others(15): Show a0001c0001t0001g0070 a0001c0001t0001g0082 a0001c0001t0003g0042 a0001c0001t0005g0001 a0001c0001t0005g0009 a0001c0001t0005g0021 a0001c0001t0005g0022 a0001c0001t0007g0089 a0001c0001t0037g0037 a0001c0001t0083g0024 a0001c0001t0084g0030 a0001c0001t0086g0031 a0001c0001t0120g0035 a0001c0002t0009g0126 a0001c0002t0022g0003 a0001c0002t0029g0149 a0001c0002t0108g0002 a0001c0007t0080g0162	18	169	0.1065	6	c.48- others(23): Show c.48-70399_48-70394dupATACGT	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20		INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148581594	A A	ATACGTC ATACGTC	intron_variant intron_variant	MODIFIER	HG01256.hp1 HG01256.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0166 a0001c0001t0002g0166	1	169	0.0059	6	c.48- others(23): Show c.48-70400_48-70399insCTACGT	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20		INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148581600	A A	ATACGTC ATACGTC	intron_variant intron_variant	MODIFIER	HG02040.hp1 HG02451.hp1 HG03486.hp2 others(2): Show HG02040.hp1 HG02451.hp1 HG03486.hp2 HG03540.hp1 HG06807.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0005 a0001c0001 a0001c0002 a0001c0005	a0001c0001t0049 a0001c0002t0078 a0001c0002t0101 others(2): Show a0001c0001t0049 a0001c0002t0078 a0001c0002t0101 a0001c0002t0105 a0001c0005t0023	a0001c0001t0049g0105 a0001c0002t0078g0152 a0001c0002t0101g0160 others(2): Show a0001c0001t0049g0105 a0001c0002t0078g0152 a0001c0002t0101g0160 a0001c0002t0105g0117 a0001c0005t0023g0125	5	169	0.0296	6	c.48- others(23): Show c.48-70394_48-70393insCTACGT	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20		INFO_REALIGN_3_PRIME	chrX	TogoVar

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