regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
LRRC28_chr15_99246481_99395729 | 99293593 | C | CAAAAAAA | intron_variant | MODIFIER | HG01109.hp2 HG01515.hp1 HG02015.hp2 others(9): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(5): Show | a0001c0001t0001g0089a0001c0001t0001g0127a0001c0001t0001g0151others(9): Show | 12 | 332 | 0.0361 | 7 | c.385 others(24): Show |
LRRC28 | ENSG00000168904.15 | transcript | ENST00000301981.8 | protein_coding | 5/9 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
LRRC36_chr16_67321815_67390204 | 67340891 | A | AGAATATG | intron_variant | MODIFIER | HG01361.hp1 HG03041.hp1 NA19240.hp1 |
a0002 | a0002c0004 | a0002c0004t0002 | a0002c0004t0002g0030a0002c0004t0002g0031a0002c0004t0002g0032 | 3 | 194 | 0.0155 | 7 | c.71- others(22): Show |
LRRC36 | ENSG00000159708.18 | transcript | ENST00000329956.11 | protein_coding | 1/13 | chr16 | TogoVar | ||||||
LRRC37A2_chr17_46507468_46560646 | 46534197 | G | GTTTTTGT | intron_variant | MODIFIER | HG01074.hp1 HG01167.hp1 HG01433.hp2 others(5): Show |
a0007a0008 | a0007c0008a0007c0014a0008c0007 | a0007c0008t0003a0007c0014t0003a0008c0007t0003 | a0007c0008t0003g0103a0007c0008t0003g0104a0007c0008t0003g0105others(5): Show | 8 | 109 | 0.0734 | 7 | c.290 others(26): Show |
LRRC37A2 | ENSG00000238083.10 | transcript | ENST00000576629.6 | protein_coding | 5/13 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |||||
LRRC37A2_chr17_46507468_46560646 | 46537077 | A | ATTTTTTT | intron_variant | MODIFIER | HG01175.hp2 HG02132.hp1 NA18967.hp1 others(1): Show |
a0002a0006 | a0002c0003a0006c0006 | a0002c0003t0002a0006c0006t0002 | a0002c0003t0002g0068a0002c0003t0002g0085a0002c0003t0002g0087others(1): Show | 4 | 109 | 0.0367 | 7 | c.290 others(26): Show |
LRRC37A2 | ENSG00000238083.10 | transcript | ENST00000576629.6 | protein_coding | 5/13 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |||||
LRRC37A2_chr17_46507468_46560646 | 46539768 | C | CAAAAAAA | intron_variant | MODIFIER | HG00639.hp1 HG01515.hp2 HG01975.hp1 others(4): Show |
a0003a0007a0026others(3): Show | a0003c0002a0007c0008a0026c0018others(3): Show | a0003c0002t0001a0007c0008t0003a0026c0018t0001others(3): Show | a0003c0002t0001g0032a0007c0008t0003g0103a0007c0008t0003g0104others(4): Show | 7 | 109 | 0.0642 | 7 | c.290 others(24): Show |
LRRC37A2 | ENSG00000238083.10 | transcript | ENST00000576629.6 | protein_coding | 5/13 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |||||
LRRC37A3_chr17_64849130_64924478 | 64866629 | T | TATATATA | intron_variant | MODIFIER | HG00544.hp1 HG01175.hp1 HG01346.hp1 others(1): Show |
a0001a0005a0020 | a0001c0001a0005c0005a0020c0015 | a0001c0001t0001a0005c0005t0003a0020c0015t0001 | a0001c0001t0001g0037a0001c0001t0001g0116a0005c0005t0003g0007others(1): Show | 4 | 138 | 0.0290 | 7 | c.305 others(26): Show |
LRRC37A3 | ENSG00000176809.11 | transcript | ENST00000584306.6 | protein_coding | 10/14 | chr17 | TogoVar | ||||||
LRRC37A3_chr17_64849130_64924478 | 64899419 | C | CAAAAAAA | intron_variant | MODIFIER | HG00639.hp2 HG01884.hp1 HG02818.hp2 others(9): Show |
a0002 | a0002c0002 | a0002c0002t0002 | a0002c0002t0002g0098a0002c0002t0002g0099a0002c0002t0002g0100others(9): Show | 12 | 138 | 0.0870 | 7 | c.-49 others(24): Show |
LRRC37A3 | ENSG00000176809.11 | transcript | ENST00000584306.6 | protein_coding | 2/14 | chr17 | TogoVar | ||||||
LRRC3B_chr3_26617772_26715776 | 26646598 | T | TAAAAAAA | intron_variant | MODIFIER | HG00609.hp2 HG01071.hp1 HG01928.hp1 others(5): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0161a0001c0001t0001g0162a0001c0001t0001g0182others(5): Show | 8 | 370 | 0.0216 | 7 | c.-16 others(28): Show |
LRRC3B | ENSG00000179796.13 | transcript | ENST00000396641.7 | protein_coding | 1/1 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
LRRC3B_chr3_26617772_26715776 | 26685657 | C | CAACTATT | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(364): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(15): Show | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0003others(363): Show | 367 | 370 | 0.9919 | 7 | c.-16 others(28): Show |
LRRC3B | ENSG00000179796.13 | transcript | ENST00000396641.7 | protein_coding | 1/1 | chr3 | TogoVar | ||||||
LRRC3C_chr17_39922732_39949999 | 39945991 | T | TAAAAAAA | downstream_gene_variant | MODIFIER | HG00323.hp2 HG01081.hp1 HG01496.hp2 others(6): Show |
a0001a0003a0007 | a0001c0001a0003c0004a0007c0015 | a0001c0001t0001a0003c0004t0001a0007c0015t0001 | a0001c0001t0001g0001a0001c0001t0001g0007a0001c0001t0001g0016others(4): Show | 9 | 404 | 0.0223 | 7 | c.*12 others(18): Show |
LRRC3C | ENSG00000204913.7 | transcript | ENST00000377924.6 | protein_coding | 993 | chr17 | TogoVar | ||||||
LRRC40_chr1_70139805_70210579 | 70190677 | T | TAAAAAAA | intron_variant | MODIFIER | HG00621.hp1 HG00735.hp2 HG01106.hp2 others(35): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0001a0001c0001t0002a0001c0004t0001 | a0001c0001t0001g0006a0001c0001t0001g0011a0001c0001t0001g0021others(33): Show | 38 | 320 | 0.1188 | 7 | c.152 others(24): Show |
LRRC40 | ENSG00000066557.6 | transcript | ENST00000370952.4 | protein_coding | 1/14 | chr1 | TogoVar | ||||||
LRRC45_chr17_82018305_82036151 | 82032542 | C | CTTCCACG | downstream_gene_variant | MODIFIER | HG01943.hp2 HG03490.hp2 HG03492.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002a0001c0001t0001g0015 | 4 | 408 | 0.0098 | 7 | c.*17 others(18): Show |
LRRC45 | ENSG00000169683.8 | transcript | ENST00000306688.8 | protein_coding | 1392 | chr17 | TogoVar | ||||||
LRRC49_chr15_70887826_71058658 | 71055853 | T | TGTGTGTG | downstream_gene_variant | MODIFIER | HG00639.hp1 HG00741.hp2 HG01074.hp1 others(29): Show |
a0001a0004 | a0001c0001a0004c0006 | a0001c0001t0002a0004c0006t0008 | a0001c0001t0002g0088a0001c0001t0002g0125a0001c0001t0002g0144others(29): Show | 32 | 262 | 0.1221 | 7 | c.*62 others(18): Show |
LRRC49 | ENSG00000137821.12 | transcript | ENST00000260382.10 | protein_coding | 2196 | chr15 | TogoVar | ||||||
LRRC4C_chr11_40109209_41464652 | 40200784 | A | AAAAAAAG | intron_variant | MODIFIER | HG01074.hp1 HG01261.hp1 HG02055.hp1 others(11): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0002t0001others(1): Show | a0001c0001t0001g0005a0001c0001t0001g0014a0001c0001t0001g0027others(11): Show | 14 | 48 | 0.2917 | 7 | c.-96 others(26): Show |
LRRC4C | ENSG00000148948.8 | transcript | ENST00000528697.6 | protein_coding | 5/6 | chr11 | TogoVar | ||||||
LRRC4C_chr11_40109209_41464652 | 40633380 | T | TCTCTCTC | intron_variant | MODIFIER | HG01261.hp1 NA18989.hp1 |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0032a0001c0001t0002g0034 | 2 | 48 | 0.0417 | 7 | c.-27 others(28): Show |
LRRC4C | ENSG00000148948.8 | transcript | ENST00000528697.6 | protein_coding | 3/6 | chr11 | TogoVar | ||||||
LRRC4C_chr11_40109209_41464652 | 40858014 | A | ACAGGGAC | intron_variant | MODIFIER | HG02055.hp2 NA18989.hp1 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0002a0001c0002t0002 | a0001c0001t0002g0034a0001c0002t0002g0008 | 2 | 48 | 0.0417 | 7 | c.-40 others(28): Show |
LRRC4C | ENSG00000148948.8 | transcript | ENST00000528697.6 | protein_coding | 2/6 | chr11 | TogoVar | ||||||
LRRC4C_chr11_40109209_41464652 | 40898353 | C | CAAAAAAA | intron_variant | MODIFIER | HG01074.hp1 HG01261.hp1 HG02622.hp2 others(8): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0002t0001others(1): Show | a0001c0001t0001g0003a0001c0001t0001g0037a0001c0001t0001g0038others(8): Show | 11 | 48 | 0.2292 | 7 | c.-40 others(28): Show |
LRRC4C | ENSG00000148948.8 | transcript | ENST00000528697.6 | protein_coding | 2/6 | chr11 | TogoVar | ||||||
LRRC4C_chr11_40109209_41464652 | 41059210 | G | GTTGTTTT | intron_variant | MODIFIER | HG02055.hp1 HG02572.hp1 HG02965.hp1 others(4): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0002t0001 | a0001c0001t0001g0004a0001c0001t0001g0038a0001c0001t0001g0040others(4): Show | 7 | 48 | 0.1458 | 7 | c.-49 others(30): Show |
LRRC4C | ENSG00000148948.8 | transcript | ENST00000528697.6 | protein_coding | 1/6 | chr11 | TogoVar | ||||||
LRRC4C_chr11_40109209_41464652 | 41163284 | G | GTTTTTTT | intron_variant | MODIFIER | HG01074.hp2 HG02280.hp2 HG02809.hp1 others(3): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0002t0001 | a0001c0001t0001g0006a0001c0001t0001g0031a0001c0001t0001g0037others(3): Show | 6 | 48 | 0.1250 | 7 | c.-49 others(30): Show |
LRRC4C | ENSG00000148948.8 | transcript | ENST00000528697.6 | protein_coding | 1/6 | chr11 | TogoVar | ||||||
LRRC4C_chr11_40109209_41464652 | 41389639 | C | CAAAAAAA | intron_variant | MODIFIER | HG01074.hp1 HG01261.hp2 HG02280.hp1 others(9): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0002t0001others(1): Show | a0001c0001t0001g0004a0001c0001t0001g0005a0001c0001t0001g0020others(9): Show | 12 | 48 | 0.2500 | 7 | c.-49 others(28): Show |
LRRC4C | ENSG00000148948.8 | transcript | ENST00000528697.6 | protein_coding | 1/6 | chr11 | TogoVar | ||||||
LRRC53_chr1_74464376_74517611 | 74486490 | G | GTGTTTTT | intron_variant | MODIFIER | HG02630.hp1 HG03540.hp2 HG03579.hp1 |
a0004a0009 | a0004c0003a0009c0010 | a0004c0003t0001a0009c0010t0003 | a0004c0003t0001g0210a0004c0003t0001g0222a0009c0010t0003g0032 | 3 | 342 | 0.0088 | 7 | c.-26 others(24): Show |
LRRC53 | ENSG00000162621.7 | transcript | ENST00000294635.5 | protein_coding | 1/4 | chr1 | TogoVar | ||||||
LRRC56_chr11_532527_559912 | 539384 | C | CTTTTTTT | intron_variant | MODIFIER | HG00099.hp2 HG00544.hp2 HG00609.hp2 others(47): Show |
a0001a0002a0003others(1): Show | a0001c0001a0002c0002a0002c0005others(2): Show | a0001c0001t0024a0001c0001t0035a0002c0002t0003others(5): Show | a0001c0001t0024g0090a0001c0001t0035g0108a0002c0002t0003g0086others(39): Show | 50 | 387 | 0.1292 | 7 | c.-15 others(24): Show |
LRRC56 | ENSG00000161328.11 | transcript | ENST00000270115.8 | protein_coding | 2/13 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | |||||
LRRC57_chr15_42532829_42553793 | 42539477 | C | CAAAAAAA | 3_prime_UTR_variant | MODIFIER | HG00621.hp1 HG00621.hp2 HG00673.hp2 others(74): Show |
a0000a0001 | a0000c0004a0001c0001 | a0000c0004t0117a0001c0001t0004a0001c0001t0008others(33): Show | a0000c0004t0117g0046a0001c0001t0004g0004a0001c0001t0004g0019others(41): Show | 77 | 356 | 0.2163 | 7 | c.*45 others(18): Show |
LRRC57 | ENSG00000180979.10 | transcript | ENST00000397130.8 | protein_coding | 6/6 | 4605 | chr15 | TogoVar | |||||
LRRC58_chr3_120319509_120354354 | 120327247 | C | CTTTTTTT | 3_prime_UTR_variant | MODIFIER | HG00733.hp1 HG00738.hp2 HG01109.hp1 others(26): Show |
a0001a0002 | a0001c0001a0002c0010 | a0001c0001t0004a0001c0001t0017a0001c0001t0034others(2): Show | a0001c0001t0004g0005a0001c0001t0004g0016a0001c0001t0004g0030others(9): Show | 29 | 376 | 0.0771 | 7 | c.*39 others(18): Show |
LRRC58 | ENSG00000163428.4 | transcript | ENST00000295628.4 | protein_coding | 4/4 | 3952 | chr3 | TogoVar | |||||
LRRC58_chr3_120319509_120354354 | 120347379 | C | CTTTTTTT | intron_variant | MODIFIER | HG01884.hp2 HG02572.hp1 HG02723.hp1 others(3): Show |
a0001 | a0001c0002a0001c0004a0001c0006 | a0001c0002t0025a0001c0002t0038a0001c0004t0014others(1): Show | a0001c0002t0025g0084a0001c0002t0038g0083a0001c0004t0014g0018others(1): Show | 6 | 376 | 0.0160 | 7 | c.500 others(24): Show |
LRRC58 | ENSG00000163428.4 | transcript | ENST00000295628.4 | protein_coding | 1/3 | chr3 | TogoVar | ||||||
LRRC71_chr1_156915632_156938094 | 156936495 | A | ATATATAT | downstream_gene_variant | MODIFIER | HG01070.hp1 HG01081.hp1 HG01346.hp2 others(13): Show |
a0001a0002a0003others(1): Show | a0001c0001a0002c0002a0003c0004others(1): Show | a0001c0001t0001a0002c0002t0001a0003c0004t0001others(1): Show | a0001c0001t0001g0215a0001c0001t0001g0248a0001c0001t0001g0298others(12): Show | 16 | 402 | 0.0398 | 7 | c.*35 others(18): Show |
LRRC71 | ENSG00000160838.14 | transcript | ENST00000337428.8 | protein_coding | 3402 | chr1 | TogoVar | ||||||
LRRC71_chr1_156915632_156938094 | 156936497 | A | AAATATAT | downstream_gene_variant | MODIFIER | HG02129.hp1 HG02622.hp1 NA18975.hp1 others(3): Show |
a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0025a0002c0002t0001g0032a0002c0002t0001g0163others(3): Show | 6 | 402 | 0.0149 | 7 | c.*35 others(18): Show |
LRRC71 | ENSG00000160838.14 | transcript | ENST00000337428.8 | protein_coding | 3404 | chr1 | TogoVar | ||||||
LRRC71_chr1_156915632_156938094 | 156936497 | A | ATATATAT | downstream_gene_variant | MODIFIER | HG01099.hp1 HG01109.hp1 HG01175.hp1 others(11): Show |
a0001a0002a0003 | a0001c0001a0002c0002a0003c0004 | a0001c0001t0001a0002c0002t0001a0003c0004t0001 | a0001c0001t0001g0018a0001c0001t0001g0029a0001c0001t0001g0050others(10): Show | 14 | 402 | 0.0348 | 7 | c.*35 others(18): Show |
LRRC71 | ENSG00000160838.14 | transcript | ENST00000337428.8 | protein_coding | 3404 | chr1 | TogoVar | ||||||
LRRC75A_chr17_16436577_16497193 | 16452025 | C | CGCGCCTT | intron_variant | MODIFIER | HG01891.hp1 HG02486.hp1 HG02615.hp2 others(5): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0010a0001c0001t0011a0001c0001t0016others(1): Show | a0001c0001t0010g0035a0001c0001t0010g0289a0001c0001t0010g0299others(5): Show | 8 | 342 | 0.0234 | 7 | c.376 others(24): Show |
LRRC75A | ENSG00000181350.12 | transcript | ENST00000470794.2 | protein_coding | 2/3 | chr17 | TogoVar | ||||||
LRRC7_chr1_69562922_70149364 | 69650539 | C | CAAAAAAA | intron_variant | MODIFIER | HG00621.hp1 HG01978.hp1 HG02257.hp2 others(5): Show |
a0001a0008 | a0001c0001a0008c0010 | a0001c0001t0002a0001c0001t0005a0001c0001t0013others(5): Show | a0001c0001t0002g0027a0001c0001t0005g0108a0001c0001t0013g0084others(5): Show | 8 | 108 | 0.0741 | 7 | c.3-2 others(22): Show |
LRRC7 | ENSG00000033122.21 | transcript | ENST00000651989.2 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
LRRC8D_chr1_89816032_89941611 | 89860783 | A | ATATATAT | intron_variant | MODIFIER | HG01515.hp2 HG03688.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0074a0001c0001t0001g0114 | 2 | 210 | 0.0095 | 7 | c.-3+ others(24): Show |
LRRC8D | ENSG00000171492.14 | transcript | ENST00000337338.9 | protein_coding | 2/2 | chr1 | TogoVar | ||||||
LRRC8D_chr1_89816032_89941611 | 89860785 | A | ATATATAT | intron_variant | MODIFIER | HG00140.hp1 HG01175.hp1 HG02300.hp2 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0005 | a0001c0001t0001g0063a0001c0001t0001g0113a0001c0001t0005g0012 | 3 | 210 | 0.0143 | 7 | c.-3+ others(24): Show |
LRRC8D | ENSG00000171492.14 | transcript | ENST00000337338.9 | protein_coding | 2/2 | chr1 | TogoVar | ||||||
LRRCC1_chr8_85102238_85151080 | 85125670 | C | CAAAAAAA | intron_variant | MODIFIER | HG00438.hp2 HG00597.hp2 HG01261.hp2 others(9): Show |
a0002a0009 | a0002c0002a0009c0009 | a0002c0002t0002a0009c0009t0002 | a0002c0002t0002g0008a0002c0002t0002g0040a0002c0002t0002g0181others(4): Show | 12 | 326 | 0.0368 | 7 | c.127 others(24): Show |
LRRCC1 | ENSG00000133739.16 | transcript | ENST00000360375.8 | protein_coding | 8/18 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | |||||
LRRD1_chr7_92139842_92184142 | 92167876 | C | CAAAAAAA | intron_variant | MODIFIER | HG00639.hp2 HG01243.hp2 HG02615.hp1 others(6): Show |
a0002 | a0002c0002a0002c0007 | a0002c0002t0001a0002c0007t0001 | a0002c0002t0001g0029a0002c0002t0001g0032a0002c0002t0001g0033others(6): Show | 9 | 360 | 0.0250 | 7 | c.-74 others(24): Show |
LRRD1 | ENSG00000240720.10 | transcript | ENST00000458448.6 | protein_coding | 1/5 | chr7 | TogoVar | ||||||
LRRFIP1_chr2_237622587_237786643 | 237688189 | G | GACCTGTC | intron_variant | MODIFIER | HG01099.hp1 HG01167.hp1 HG01169.hp2 others(16): Show |
a0001a0002 | a0001c0001a0001c0002a0002c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(7): Show | a0001c0001t0001g0003a0001c0001t0001g0006a0001c0001t0001g0008others(16): Show | 19 | 276 | 0.0688 | 7 | c.97- others(24): Show |
LRRFIP1 | ENSG00000124831.20 | transcript | ENST00000308482.14 | protein_coding | 1/23 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
LRRFIP1_chr2_237622587_237786643 | 237690953 | C | CTTTTCCT | intron_variant | MODIFIER | HG00544.hp2 HG00673.hp2 HG01358.hp1 others(32): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0005others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0007others(14): Show | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0003others(32): Show | 35 | 276 | 0.1268 | 7 | c.97- others(24): Show |
LRRFIP1 | ENSG00000124831.20 | transcript | ENST00000308482.14 | protein_coding | 1/23 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
LRRFIP2_chr3_37047626_37179582 | 37154013 | C | CAAAAAAA | intron_variant | MODIFIER | HG00099.hp1 HG00544.hp2 HG00639.hp2 others(79): Show |
a0001a0003a0004others(1): Show | a0001c0001a0001c0002a0001c0012others(5): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(7): Show | a0001c0001t0001g0062a0001c0001t0002g0001a0001c0001t0002g0026others(78): Show | 82 | 268 | 0.3060 | 7 | c.-55 others(24): Show |
LRRFIP2 | ENSG00000093167.18 | transcript | ENST00000336686.9 | protein_coding | 1/27 | chr3 | TogoVar | ||||||
LRRIQ1_chr12_85031351_85250105 | 85198055 | T | TTATTATA | intron_variant | MODIFIER | HG02257.hp2 HG02486.hp2 HG02976.hp1 others(7): Show |
a0001a0008a0012 | a0001c0001a0001c0005a0008c0012others(1): Show | a0001c0001t0001a0001c0005t0001a0008c0012t0001others(1): Show | a0001c0001t0001g0004a0001c0001t0001g0013a0001c0005t0001g0118others(7): Show | 10 | 228 | 0.0439 | 7 | c.482 others(28): Show |
LRRIQ1 | ENSG00000133640.20 | transcript | ENST00000393217.7 | protein_coding | 24/26 | chr12 | TogoVar | ||||||
LRRIQ3_chr1_74021015_74203176 | 74154240 | C | CAAAAAAA | intron_variant | MODIFIER | HG01168.hp1 HG02165.hp1 HG03130.hp2 others(3): Show |
a0001a0002a0010 | a0001c0001a0002c0002a0010c0011 | a0001c0001t0001a0002c0002t0003a0010c0011t0001 | a0001c0001t0001g0208a0001c0001t0001g0237a0002c0002t0003g0121others(3): Show | 6 | 274 | 0.0219 | 7 | c.707 others(24): Show |
LRRIQ3 | ENSG00000162620.16 | transcript | ENST00000354431.9 | protein_coding | 4/7 | chr1 | TogoVar | ||||||
LRRIQ4_chr3_169807870_169842773 | 169830377 | G | GAAAAAAA | intron_variant | MODIFIER | HG00438.hp2 HG02071.hp1 HG02080.hp2 others(14): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0010a0001c0001t0001g0036a0001c0001t0001g0176others(13): Show | 17 | 386 | 0.0440 | 7 | c.119 others(22): Show |
LRRIQ4 | ENSG00000188306.7 | transcript | ENST00000340806.7 | protein_coding | 3/5 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
LRRK1_chr15_100914357_101083257 | 101063668 | T | TACAAAAC | intron_variant | MODIFIER | HG00280.hp2 HG00323.hp2 HG00609.hp1 others(97): Show |
a0001a0002a0012others(7): Show | a0001c0002a0001c0025a0001c0036others(22): Show | a0001c0002t0223a0001c0025t0221a0001c0025t0263others(79): Show | a0001c0002t0223g0085a0001c0025t0221g0108a0001c0025t0263g0137others(97): Show | 100 | 338 | 0.2959 | 7 | c.491 others(24): Show |
LRRK1 | ENSG00000154237.13 | transcript | ENST00000388948.8 | protein_coding | 31/33 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
LRRK1_chr15_100914357_101083257 | 101070510 | T | TGCCCCAG | 3_prime_UTR_variant | MODIFIER | HG01081.hp2 HG01099.hp2 HG01109.hp1 others(20): Show |
a0001a0002a0004others(2): Show | a0001c0006a0001c0007a0001c0010others(8): Show | a0001c0006t0259a0001c0007t0212a0001c0007t0216others(20): Show | a0001c0006t0259g0120a0001c0007t0212g0075a0001c0007t0216g0006others(20): Show | 23 | 338 | 0.0681 | 7 | c.*16 others(18): Show |
LRRK1 | ENSG00000154237.13 | transcript | ENST00000388948.8 | protein_coding | 34/34 | 1676 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||
LRRN2_chr1_204612170_204690738 | 204631256 | C | CAATCTAA | intron_variant | MODIFIER | HG01515.hp1 HG02735.hp1 NA19086.hp2 |
a0001 | a0001c0002 | a0001c0002t0002 | a0001c0002t0002g0096a0001c0002t0002g0116a0001c0002t0002g0142 | 3 | 328 | 0.0092 | 7 | c.-22 others(28): Show |
LRRN2 | ENSG00000170382.12 | transcript | ENST00000367177.4 | protein_coding | 1/1 | chr1 | TogoVar | ||||||
LRRN2_chr1_204612170_204690738 | 204638402 | C | CTTTTTTT | intron_variant | MODIFIER | HG00323.hp2 HG00438.hp2 HG00621.hp2 others(28): Show |
a0001a0003 | a0001c0001a0001c0002a0003c0004 | a0001c0001t0001a0001c0002t0001a0001c0002t0002others(2): Show | a0001c0001t0001g0126a0001c0002t0001g0305a0001c0002t0001g0306others(28): Show | 31 | 328 | 0.0945 | 7 | c.-22 others(28): Show |
LRRN2 | ENSG00000170382.12 | transcript | ENST00000367177.4 | protein_coding | 1/1 | chr1 | TogoVar | ||||||
LRRN4_chr20_6035546_6059060 | 6048230 | C | CTGCTACA | intron_variant | MODIFIER | HG00558.hp1 HG00621.hp2 HG00639.hp2 others(46): Show |
a0001a0003a0010others(2): Show | a0001c0001a0001c0015a0003c0003others(4): Show | a0001c0001t0001a0001c0015t0009a0003c0003t0002others(4): Show | a0001c0001t0001g0109a0001c0015t0009g0036a0003c0003t0002g0004others(15): Show | 49 | 402 | 0.1219 | 7 | c.860 others(24): Show |
LRRN4 | ENSG00000125872.9 | transcript | ENST00000378858.5 | protein_coding | 3/4 | chr20 | TogoVar | ||||||
LRRTM3_chr10_66921036_67106551 | 66978546 | A | ATATATAT | intron_variant | MODIFIER | HG02615.hp2 HG02895.hp2 HG04115.hp2 |
a0001 | a0001c0001a0001c0003 | a0001c0001t0002a0001c0001t0006a0001c0003t0009 | a0001c0001t0002g0023a0001c0001t0006g0258a0001c0003t0009g0288 | 3 | 294 | 0.0102 | 7 | c.153 others(28): Show |
LRRTM3 | ENSG00000198739.11 | transcript | ENST00000361320.5 | protein_coding | 2/2 | chr10 | TogoVar | ||||||
LRRTM3_chr10_66921036_67106551 | 66996649 | C | CAAAAAAA | intron_variant | MODIFIER | HG01891.hp2 HG02071.hp1 HG02976.hp2 others(7): Show |
a0001a0002 | a0001c0001a0001c0003a0002c0002 | a0001c0001t0001a0001c0001t0002a0001c0003t0021others(1): Show | a0001c0001t0001g0015a0001c0001t0001g0098a0001c0001t0001g0125others(7): Show | 10 | 294 | 0.0340 | 7 | c.153 others(28): Show |
LRRTM3 | ENSG00000198739.11 | transcript | ENST00000361320.5 | protein_coding | 2/2 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | |||||
LRRTM3_chr10_66921036_67106551 | 67032756 | T | TGTAAAAC | intron_variant | MODIFIER | HG01433.hp1 HG02809.hp1 HG03130.hp1 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0025 | a0001c0001t0001g0124a0001c0001t0001g0125a0001c0001t0001g0132others(3): Show | 6 | 294 | 0.0204 | 7 | c.153 others(28): Show |
LRRTM3 | ENSG00000198739.11 | transcript | ENST00000361320.5 | protein_coding | 2/2 | chr10 | TogoVar | ||||||
LRRTM4_chr2_76742685_77527376 | 76746382 | C | CAAAAAAA | downstream_gene_variant | MODIFIER | HG01516.hp2 HG01891.hp1 HG02486.hp1 others(8): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(1): Show | a0001c0001t0001g0016a0001c0001t0001g0017a0001c0001t0001g0092others(8): Show | 11 | 128 | 0.0859 | 7 | c.*23 others(18): Show |
LRRTM4 | ENSG00000176204.14 | transcript | ENST00000409884.6 | protein_coding | 1302 | chr2 | TogoVar | ||||||
LRRTM4_chr2_76742685_77527376 | 76781072 | T | TGGGGTCA | intron_variant | MODIFIER | HG01192.hp2 HG01261.hp1 HG01884.hp2 others(17): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(2): Show | a0001c0001t0001g0014a0001c0001t0001g0020a0001c0001t0001g0030others(17): Show | 20 | 128 | 0.1563 | 7 | c.155 others(28): Show |
LRRTM4 | ENSG00000176204.14 | transcript | ENST00000409884.6 | protein_coding | 3/3 | chr2 | TogoVar |