Joint Open Genome and Omics Platform (JoGo)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	status	chr	external
CNTN5_chr11_99015949_100363885	100258626	C C	CCAACATT CCAACATT	intron_variant intron_variant	MODIFIER	HG00733.hp1 HG00735.hp2 HG00738.hp2 others(7): Show HG00733.hp1 HG00735.hp2 HG00738.hp2 HG01123.hp2 HG01496.hp2 HG01934.hp1 HG01934.hp2 NA18939.hp2 NA18957.hp1 NA19000.hp2	a0001 a0003 a0005 others(1): Show a0001 a0003 a0005 a0010	a0001c0001 a0003c0003 a0005c0004 others(1): Show a0001c0001 a0003c0003 a0005c0004 a0010c0007	a0001c0001t0001 a0001c0001t0009 a0001c0001t0011 others(4): Show a0001c0001t0001 a0001c0001t0009 a0001c0001t0011 a0001c0001t0012 a0003c0003t0002 a0005c0004t0002 a0010c0007t0023	a0001c0001t0001g0052 a0001c0001t0009g0063 a0001c0001t0011g0062 others(7): Show a0001c0001t0001g0052 a0001c0001t0009g0063 a0001c0001t0011g0062 a0001c0001t0012g0018 a0001c0001t0012g0030 a0003c0003t0002g0014 a0003c0003t0002g0015 a0005c0004t0002g0001 a0005c0004t0002g0041 a0010c0007t0023g0046	10	66	0.1515	7	c.216 others(26): Show c.2164+2724_2164+2730dupAACATTC	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	17/24	INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN6_chr3_1088024_1409217	1245221	T T	TATATAAC TATATAAC	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG01993.hp2 HG02027.hp1 others(3): Show HG01884.hp1 HG01993.hp2 HG02027.hp1 HG02970.hp2 HG03130.hp1 HG03927.hp2	a0001 a0001	a0001c0005 a0001c0008 a0001c0005 a0001c0008	a0001c0005t0001 a0001c0008t0001 a0001c0005t0001 a0001c0008t0001	a0001c0005t0001g0015 a0001c0005t0001g0088 a0001c0005t0001g0180 others(3): Show a0001c0005t0001g0015 a0001c0005t0001g0088 a0001c0005t0001g0180 a0001c0008t0001g0102 a0001c0008t0001g0197 a0001c0008t0001g0218	6	216	0.0278	7	c.358 others(26): Show c.358+17233_358+17234insACATATA	CNTN6	ENSG00000134115.13	transcript	ENST00000446702.7	protein_coding	4/22	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN6_chr3_1088024_1409217	1245223	T T	TATATAAC TATATAAC	intron_variant intron_variant	MODIFIER	HG01123.hp2 HG01496.hp1 HG01123.hp2 HG01496.hp1	a0001 a0001	a0001c0008 a0001c0008	a0001c0008t0001 a0001c0008t0001	a0001c0008t0001g0125 a0001c0008t0001g0169 a0001c0008t0001g0125 a0001c0008t0001g0169	2	176	0.0114	7	c.358 others(26): Show c.358+17235_358+17236insACATATA	CNTN6	ENSG00000134115.13	transcript	ENST00000446702.7	protein_coding	4/22	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN6_chr3_1088024_1409217	1245242	A A	ATATATAT ATATATAT	intron_variant intron_variant	MODIFIER	HG03209.hp1 NA19030.hp2 HG03209.hp1 NA19030.hp2	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0001 a0001c0006t0001	a0001c0006t0001g0112 a0001c0006t0001g0162 a0001c0006t0001g0112 a0001c0006t0001g0162	2	217	0.0092	7	c.358 others(26): Show c.358+17249_358+17250insTATATAT	CNTN6	ENSG00000134115.13	transcript	ENST00000446702.7	protein_coding	4/22		chr3	TogoVar
CNTN6_chr3_1088024_1409217	1245266	T T	TATATAAC TATATAAC	intron_variant intron_variant	MODIFIER	HG02809.hp2 HG03139.hp1 HG02809.hp2 HG03139.hp1	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0001 a0001c0005t0001	a0001c0005t0001g0005 a0001c0005t0001g0182 a0001c0005t0001g0005 a0001c0005t0001g0182	2	206	0.0097	7	c.358 others(26): Show c.358+17278_358+17279insACATATA	CNTN6	ENSG00000134115.13	transcript	ENST00000446702.7	protein_coding	4/22	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN6_chr3_1088024_1409217	1245301	T T	TATATAAC TATATAAC	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG01175.hp1 HG01255.hp2 others(21): Show HG00639.hp1 HG01175.hp1 HG01255.hp2 HG01256.hp1 HG02145.hp2 HG02148.hp1 HG02280.hp1 HG02280.hp2 HG02486.hp2 HG02622.hp1 HG02630.hp1 HG02723.hp2 HG02896.hp2 HG02976.hp2 HG03195.hp2 HG03209.hp1 HG03579.hp1 NA18906.hp1 NA18906.hp2 NA19030.hp2 NA19043.hp1 NA20300.hp1 NA20300.hp2 NA20752.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0001c0005 others(7): Show a0001c0001 a0001c0003 a0001c0005 a0001c0006 a0001c0007 a0001c0008 a0001c0012 a0001c0013 a0001c0020 a0002c0011	a0001c0001t0001 a0001c0001t0002 a0001c0003t0001 others(9): Show a0001c0001t0001 a0001c0001t0002 a0001c0003t0001 a0001c0005t0001 a0001c0006t0001 a0001c0006t0004 a0001c0007t0001 a0001c0008t0001 a0001c0012t0001 a0001c0013t0001 a0001c0020t0001 a0002c0011t0001	a0001c0001t0001g0013 a0001c0001t0001g0030 a0001c0001t0001g0079 others(21): Show a0001c0001t0001g0013 a0001c0001t0001g0030 a0001c0001t0001g0079 a0001c0001t0001g0096 a0001c0001t0001g0198 a0001c0001t0002g0044 a0001c0003t0001g0091 a0001c0003t0001g0105 a0001c0005t0001g0203 a0001c0005t0001g0208 a0001c0006t0001g0112 a0001c0006t0001g0154 a0001c0006t0001g0162 a0001c0006t0001g0187 a0001c0006t0001g0210 a0001c0006t0001g0229 a0001c0006t0004g0111 a0001c0007t0001g0012 a0001c0008t0001g0118 a0001c0008t0001g0211 a0001c0012t0001g0078 a0001c0013t0001g0199 a0001c0020t0001g0157 a0002c0011t0001g0007	24	223	0.1076	7	c.358 others(26): Show c.358+17313_358+17314insACATATA	CNTN6	ENSG00000134115.13	transcript	ENST00000446702.7	protein_coding	4/22	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN6_chr3_1088024_1409217	1265044	C C	CTTTTTTT CTTTTTTT	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG00733.hp2 HG00735.hp1 others(4): Show HG00639.hp2 HG00733.hp2 HG00735.hp1 HG00741.hp2 HG03453.hp2 HG03834.hp2 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(2): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0006	a0001c0001t0001 a0001c0002t0001 a0001c0002t0002 others(3): Show a0001c0001t0001 a0001c0002t0001 a0001c0002t0002 a0001c0003t0001 a0001c0004t0001 a0001c0006t0001	a0001c0001t0001g0049 a0001c0002t0001g0039 a0001c0002t0001g0047 others(4): Show a0001c0001t0001g0049 a0001c0002t0001g0039 a0001c0002t0001g0047 a0001c0002t0002g0021 a0001c0003t0001g0120 a0001c0004t0001g0136 a0001c0006t0001g0184	7	60	0.1167	7	c.359 others(26): Show c.359-13356_359-13350dupTTTTTTT	CNTN6	ENSG00000134115.13	transcript	ENST00000446702.7	protein_coding	4/22	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN6_chr3_1088024_1409217	1277346	C C	CTTTTCTT CTTTTCTT	intron_variant intron_variant	MODIFIER	HG00741.hp1 NA18612.hp2 NA18951.hp1 others(2): Show HG00741.hp1 NA18612.hp2 NA18951.hp1 NA18953.hp2 NA18969.hp2	a0001 a0001	a0001c0002 a0001c0004 a0001c0007 a0001c0002 a0001c0004 a0001c0007	a0001c0002t0001 a0001c0004t0001 a0001c0007t0001 a0001c0002t0001 a0001c0004t0001 a0001c0007t0001	a0001c0002t0001g0068 a0001c0004t0001g0026 a0001c0004t0001g0052 others(2): Show a0001c0002t0001g0068 a0001c0004t0001g0026 a0001c0004t0001g0052 a0001c0004t0001g0071 a0001c0007t0001g0063	5	6	0.8333	7	c.359 others(24): Show c.359-1063_359-1062insCTTTTTT	CNTN6	ENSG00000134115.13	transcript	ENST00000446702.7	protein_coding	4/22	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN6_chr3_1088024_1409217	1277346	C C	CTTTTTTT CTTTTTTT	intron_variant intron_variant	MODIFIER	HG02027.hp2 HG02040.hp1 HG02155.hp2 others(13): Show HG02027.hp2 HG02040.hp1 HG02155.hp2 HG02165.hp2 HG02258.hp2 HG02523.hp2 HG02602.hp2 HG03239.hp2 HG03471.hp1 NA18950.hp2 NA18961.hp1 NA18961.hp2 NA18969.hp1 NA19009.hp2 NA19065.hp1 NA19084.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(2): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005	a0001c0001t0001 a0001c0002t0001 a0001c0003t0001 others(2): Show a0001c0001t0001 a0001c0002t0001 a0001c0003t0001 a0001c0004t0001 a0001c0005t0001	a0001c0001t0001g0141 a0001c0001t0001g0171 a0001c0002t0001g0059 others(13): Show a0001c0001t0001g0141 a0001c0001t0001g0171 a0001c0002t0001g0059 a0001c0002t0001g0065 a0001c0002t0001g0107 a0001c0002t0001g0153 a0001c0003t0001g0011 a0001c0003t0001g0025 a0001c0003t0001g0027 a0001c0003t0001g0098 a0001c0003t0001g0124 a0001c0003t0001g0224 a0001c0003t0001g0226 a0001c0004t0001g0119 a0001c0005t0001g0160 a0001c0005t0001g0181	16	17	0.9412	7	c.359 others(24): Show c.359-1042_359-1036dupTTTTTTT	CNTN6	ENSG00000134115.13	transcript	ENST00000446702.7	protein_coding	4/22	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN6_chr3_1088024_1409217	1280459	A A	ATTTTTTT ATTTTTTT	intron_variant intron_variant	MODIFIER	HG02074.hp2 HG02148.hp2 HG02622.hp1 others(3): Show HG02074.hp2 HG02148.hp2 HG02622.hp1 HG02922.hp2 HG03927.hp1 NA19009.hp1	a0001 a0001	a0001c0002 a0001c0003 a0001c0005 others(1): Show a0001c0002 a0001c0003 a0001c0005 a0001c0020	a0001c0002t0001 a0001c0003t0001 a0001c0005t0001 others(1): Show a0001c0002t0001 a0001c0003t0001 a0001c0005t0001 a0001c0020t0001	a0001c0002t0001g0174 a0001c0002t0001g0176 a0001c0003t0001g0115 others(3): Show a0001c0002t0001g0174 a0001c0002t0001g0176 a0001c0003t0001g0115 a0001c0003t0001g0144 a0001c0005t0001g0196 a0001c0020t0001g0157	6	46	0.1304	7	c.454 others(24): Show c.454+1968_454+1974dupTTTTTTT	CNTN6	ENSG00000134115.13	transcript	ENST00000446702.7	protein_coding	5/22	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN6_chr3_1088024_1409217	1336896	G G	GGGAAAGT GGGAAAGT	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG01952.hp2 HG02486.hp2 others(11): Show HG01884.hp2 HG01952.hp2 HG02486.hp2 HG02559.hp1 HG02615.hp1 HG02615.hp2 HG02717.hp2 HG02723.hp2 HG02922.hp2 HG02976.hp1 HG03139.hp1 NA18522.hp1 NA19030.hp1 NA20129.hp2	a0001 a0002 a0001 a0002	a0001c0002 a0001c0005 a0001c0006 others(4): Show a0001c0002 a0001c0005 a0001c0006 a0001c0009 a0002c0011 a0002c0014 a0002c0017	a0001c0002t0004 a0001c0005t0001 a0001c0006t0001 others(4): Show a0001c0002t0004 a0001c0005t0001 a0001c0006t0001 a0001c0009t0001 a0002c0011t0001 a0002c0014t0001 a0002c0017t0001	a0001c0002t0004g0228 a0001c0005t0001g0182 a0001c0005t0001g0188 others(11): Show a0001c0002t0004g0228 a0001c0005t0001g0182 a0001c0005t0001g0188 a0001c0005t0001g0196 a0001c0005t0001g0203 a0001c0005t0001g0230 a0001c0006t0001g0183 a0001c0006t0001g0213 a0001c0006t0001g0223 a0001c0009t0001g0155 a0002c0011t0001g0007 a0002c0014t0001g0220 a0002c0014t0001g0232 a0002c0017t0001g0179	14	230	0.0609	7	c.136 others(26): Show c.1364+6973_1364+6979dupAGTGGAA	CNTN6	ENSG00000134115.13	transcript	ENST00000446702.7	protein_coding	11/22	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTNAP1_chr17_42677531_42704993	42686469	G G	GTTTTTTT GTTTTTTT	intron_variant intron_variant	MODIFIER	HG01167.hp1 HG01192.hp2 HG01952.hp1 others(21): Show HG01167.hp1 HG01192.hp2 HG01952.hp1 HG02074.hp2 HG02083.hp1 HG02273.hp1 HG02280.hp1 HG03139.hp2 HG03453.hp1 HG03654.hp2 HG03669.hp2 HG03834.hp1 HG03927.hp2 HG04184.hp2 NA18906.hp1 NA18956.hp2 NA18962.hp1 NA18968.hp1 NA18982.hp1 NA18984.hp2 NA18992.hp1 NA19010.hp1 NA19059.hp2 NA19088.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0005 a0001c0026 others(1): Show a0001c0001 a0001c0005 a0001c0026 a0002c0014	a0001c0001t0002 a0001c0005t0002 a0001c0026t0008 others(1): Show a0001c0001t0002 a0001c0005t0002 a0001c0026t0008 a0002c0014t0010	a0001c0001t0002g0006 a0001c0001t0002g0025 a0001c0001t0002g0038 others(13): Show a0001c0001t0002g0006 a0001c0001t0002g0025 a0001c0001t0002g0038 a0001c0001t0002g0111 a0001c0001t0002g0122 a0001c0001t0002g0148 a0001c0001t0002g0150 a0001c0001t0002g0151 a0001c0001t0002g0152 a0001c0001t0002g0153 a0001c0001t0002g0154 a0001c0001t0002g0155 a0001c0005t0002g0112 a0001c0005t0002g0119 a0001c0026t0008g0006 a0002c0014t0010g0149	24	204	0.1176	7	c.900 others(22): Show c.900+346_900+352dupTTTTTTT	CNTNAP1	ENSG00000108797.12	transcript	ENST00000264638.9	protein_coding	6/23	INFO_REALIGN_3_PRIME	chr17	TogoVar
CNTNAP2_chr7_146111801_148425998	146352750	G G	GTTTTTTT GTTTTTTT	intron_variant intron_variant	MODIFIER	HG02630.hp2 HG02922.hp2 HG02976.hp1 HG02630.hp2 HG02922.hp2 HG02976.hp1	a0001 a0001	a0001c0002 a0001c0004 a0001c0015 a0001c0002 a0001c0004 a0001c0015	a0001c0002t0002 a0001c0004t0005 a0001c0015t0001 a0001c0002t0002 a0001c0004t0005 a0001c0015t0001	a0001c0002t0002g0013 a0001c0004t0005g0004 a0001c0015t0001g0011 a0001c0002t0002g0013 a0001c0004t0005g0004 a0001c0015t0001g0011	3	12	0.2500	7	c.97+ others(26): Show c.97+235792_97+235798dupTTTTTTT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146417949	T T	TGCACAAG TGCACAAG	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG01891.hp1 HG01891.hp2 others(30): Show HG00735.hp2 HG01891.hp1 HG01891.hp2 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02630.hp1 HG02630.hp2 HG02717.hp1 HG02717.hp2 HG02886.hp1 HG02886.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp2 HG02976.hp1 HG02976.hp2 HG03098.hp1 HG03098.hp2 HG03139.hp1 HG03139.hp2 HG03225.hp1 HG03225.hp2 HG03540.hp1 NA18522.hp1 NA18522.hp2 NA19030.hp1 NA19030.hp2 NA20129.hp1 NA20129.hp2 NA21309.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0001 a0001c0002 a0001c0003 others(16): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0006 a0001c0008 a0001c0009 a0001c0010 a0001c0011 a0001c0012 a0001c0013 a0001c0015 a0001c0018 a0001c0019 a0002c0016 a0002c0017 a0003c0014 a0004c0020	a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 others(26): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 a0001c0001t0007 a0001c0002t0001 a0001c0002t0002 a0001c0002t0010 a0001c0003t0011 a0001c0003t0013 a0001c0003t0020 a0001c0003t0023 a0001c0004t0003 a0001c0004t0005 a0001c0005t0008 a0001c0005t0022 a0001c0006t0009 a0001c0008t0001 a0001c0009t0019 a0001c0010t0002 a0001c0011t0016 a0001c0012t0004 a0001c0013t0003 a0001c0015t0001 a0001c0018t0002 a0001c0019t0006 a0002c0016t0004 a0002c0017t0015 a0003c0014t0021 a0004c0020t0005	a0001c0001t0001g0003 a0001c0001t0001g0038 a0001c0001t0002g0006 others(30): Show a0001c0001t0001g0003 a0001c0001t0001g0038 a0001c0001t0002g0006 a0001c0001t0006g0009 a0001c0001t0007g0018 a0001c0001t0007g0020 a0001c0002t0001g0008 a0001c0002t0001g0021 a0001c0002t0002g0013 a0001c0002t0010g0002 a0001c0003t0011g0023 a0001c0003t0013g0010 a0001c0003t0020g0017 a0001c0003t0023g0030 a0001c0004t0003g0035 a0001c0004t0003g0036 a0001c0004t0005g0004 a0001c0005t0008g0005 a0001c0005t0022g0032 a0001c0006t0009g0028 a0001c0008t0001g0025 a0001c0009t0019g0027 a0001c0010t0002g0014 a0001c0011t0016g0019 a0001c0012t0004g0026 a0001c0013t0003g0039 a0001c0015t0001g0011 a0001c0018t0002g0012 a0001c0019t0006g0015 a0002c0016t0004g0024 a0002c0017t0015g0037 a0003c0014t0021g0022 a0004c0020t0005g0016	33	40	0.8250	7	c.97+ others(26): Show c.97+300976_97+300977insGCACAAG	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23		chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146456782	T T	TGTCTATA TGTCTATA	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02886.hp1 HG03225.hp2 others(1): Show HG02451.hp2 HG02886.hp1 HG03225.hp2 NA19030.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0001c0018 others(1): Show a0001c0001 a0001c0003 a0001c0018 a0002c0016	a0001c0001t0002 a0001c0003t0013 a0001c0018t0002 others(1): Show a0001c0001t0002 a0001c0003t0013 a0001c0018t0002 a0002c0016t0004	a0001c0001t0002g0006 a0001c0003t0013g0010 a0001c0018t0002g0012 others(1): Show a0001c0001t0002g0006 a0001c0003t0013g0010 a0001c0018t0002g0012 a0002c0016t0004g0024	4	40	0.1000	7	c.98- others(26): Show c.98-317488_98-317482dupGTCTATA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146535271	T T	TAATATAA TAATATAA	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG03098.hp2 HG02486.hp2 HG03098.hp2	a0001 a0001	a0001c0002 a0001c0003 a0001c0002 a0001c0003	a0001c0002t0001 a0001c0003t0011 a0001c0002t0001 a0001c0003t0011	a0001c0002t0001g0021 a0001c0003t0011g0023 a0001c0002t0001g0021 a0001c0003t0011g0023	2	37	0.0541	7	c.98- others(26): Show c.98-239000_98-238999insAATATAA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23		chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146633832	G G	GAAAAAAA GAAAAAAA	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG02717.hp1 HG02717.hp2 others(2): Show HG02486.hp2 HG02717.hp1 HG02717.hp2 HG03225.hp2 NA21309.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0001c0005 others(2): Show a0001c0001 a0001c0003 a0001c0005 a0001c0018 a0002c0017	a0001c0001t0018 a0001c0003t0011 a0001c0005t0008 others(2): Show a0001c0001t0018 a0001c0003t0011 a0001c0005t0008 a0001c0018t0002 a0002c0017t0015	a0001c0001t0018g0001 a0001c0003t0011g0023 a0001c0005t0008g0005 others(2): Show a0001c0001t0018g0001 a0001c0003t0011g0023 a0001c0005t0008g0005 a0001c0018t0002g0012 a0002c0017t0015g0037	5	9	0.5556	7	c.98- others(26): Show c.98-140421_98-140415dupAAAAAAA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146684639	C C	CAAAAAAA CAAAAAAA	intron_variant intron_variant	MODIFIER	HG02717.hp1 HG03239.hp1 HG03239.hp2 others(1): Show HG02717.hp1 HG03239.hp1 HG03239.hp2 NA21309.hp2	a0001 a0002 a0005 a0001 a0002 a0005	a0001c0001 a0001c0002 a0002c0017 others(1): Show a0001c0001 a0001c0002 a0002c0017 a0005c0007	a0001c0001t0018 a0001c0002t0002 a0002c0017t0015 others(1): Show a0001c0001t0018 a0001c0002t0002 a0002c0017t0015 a0005c0007t0017	a0001c0001t0018g0001 a0001c0002t0002g0040 a0002c0017t0015g0037 others(1): Show a0001c0001t0018g0001 a0001c0002t0002g0040 a0002c0017t0015g0037 a0005c0007t0017g0031	4	11	0.3636	7	c.98- others(24): Show c.98-89618_98-89612dupAAAAAAA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146717021	A A	AACTGGTT AACTGGTT	intron_variant intron_variant	MODIFIER	HG02630.hp1 HG02896.hp2 HG02897.hp2 others(1): Show HG02630.hp1 HG02896.hp2 HG02897.hp2 HG02922.hp2	a0001 a0001	a0001c0004 a0001c0012 a0001c0004 a0001c0012	a0001c0004t0003 a0001c0004t0005 a0001c0012t0004 a0001c0004t0003 a0001c0004t0005 a0001c0012t0004	a0001c0004t0003g0035 a0001c0004t0003g0036 a0001c0004t0005g0004 others(1): Show a0001c0004t0003g0035 a0001c0004t0003g0036 a0001c0004t0005g0004 a0001c0012t0004g0026	4	40	0.1000	7	c.98- others(24): Show c.98-57250_98-57249insACTGGTT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23		chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146748143	C C	CTTTTCTT CTTTTCTT	intron_variant intron_variant	MODIFIER	HG02896.hp1 HG03239.hp1 HG03540.hp1 HG02896.hp1 HG03239.hp1 HG03540.hp1	a0001 a0004 a0005 a0001 a0004 a0005	a0001c0002 a0004c0020 a0005c0007 a0001c0002 a0004c0020 a0005c0007	a0001c0002t0010 a0004c0020t0005 a0005c0007t0017 a0001c0002t0010 a0004c0020t0005 a0005c0007t0017	a0001c0002t0010g0002 a0004c0020t0005g0016 a0005c0007t0017g0031 a0001c0002t0010g0002 a0004c0020t0005g0016 a0005c0007t0017g0031	3	14	0.2143	7	c.98- others(24): Show c.98-26124_98-26123insCTTTTTT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146760409	C C	CTTTTTTT CTTTTTTT	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG02630.hp2 HG02896.hp1 HG01891.hp1 HG02630.hp2 HG02896.hp1	a0001 a0003 a0004 a0001 a0003 a0004	a0001c0002 a0003c0014 a0004c0020 a0001c0002 a0003c0014 a0004c0020	a0001c0002t0002 a0003c0014t0021 a0004c0020t0005 a0001c0002t0002 a0003c0014t0021 a0004c0020t0005	a0001c0002t0002g0013 a0003c0014t0021g0022 a0004c0020t0005g0016 a0001c0002t0002g0013 a0003c0014t0021g0022 a0004c0020t0005g0016	3	6	0.5000	7	c.98- others(24): Show c.98-13835_98-13829dupTTTTTTT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147025440	A A	AGGGGAGG AGGGGAGG	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG00735.hp2 HG02717.hp1 others(9): Show HG00735.hp1 HG00735.hp2 HG02717.hp1 HG02717.hp2 HG02897.hp1 HG02922.hp2 HG03139.hp1 HG03139.hp2 HG03225.hp1 NA18522.hp1 NA18522.hp2 NA21309.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0004 others(8): Show a0001c0001 a0001c0002 a0001c0004 a0001c0005 a0001c0006 a0001c0008 a0001c0009 a0001c0011 a0001c0013 a0001c0019 a0002c0017	a0001c0001t0007 a0001c0001t0018 a0001c0002t0001 others(9): Show a0001c0001t0007 a0001c0001t0018 a0001c0002t0001 a0001c0004t0005 a0001c0005t0008 a0001c0006t0014 a0001c0008t0001 a0001c0009t0019 a0001c0011t0016 a0001c0013t0003 a0001c0019t0006 a0002c0017t0015	a0001c0001t0007g0018 a0001c0001t0018g0001 a0001c0002t0001g0008 others(9): Show a0001c0001t0007g0018 a0001c0001t0018g0001 a0001c0002t0001g0008 a0001c0004t0005g0004 a0001c0005t0008g0005 a0001c0006t0014g0033 a0001c0008t0001g0025 a0001c0009t0019g0027 a0001c0011t0016g0019 a0001c0013t0003g0039 a0001c0019t0006g0015 a0002c0017t0015g0037	12	25	0.4800	7	c.403 others(26): Show c.403-18464_403-18458dupGGAGGGG	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	3/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147073222	A A	ATGTATTT ATGTATTT	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG02451.hp1 HG02630.hp1 others(8): Show HG00735.hp2 HG02451.hp1 HG02630.hp1 HG02886.hp1 HG02896.hp1 HG02922.hp1 HG03098.hp1 NA19030.hp2 NA20129.hp2 NA21309.hp1 NA21309.hp2	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0001c0002 a0001c0003 others(5): Show a0001c0001 a0001c0002 a0001c0003 a0001c0010 a0001c0012 a0001c0019 a0002c0016 a0004c0020	a0001c0001t0001 a0001c0001t0012 a0001c0001t0018 others(8): Show a0001c0001t0001 a0001c0001t0012 a0001c0001t0018 a0001c0002t0001 a0001c0003t0013 a0001c0003t0023 a0001c0010t0002 a0001c0012t0004 a0001c0019t0006 a0002c0016t0004 a0004c0020t0005	a0001c0001t0001g0003 a0001c0001t0012g0034 a0001c0001t0018g0001 others(8): Show a0001c0001t0001g0003 a0001c0001t0012g0034 a0001c0001t0018g0001 a0001c0002t0001g0007 a0001c0003t0013g0010 a0001c0003t0023g0030 a0001c0010t0002g0014 a0001c0012t0004g0026 a0001c0019t0006g0015 a0002c0016t0004g0024 a0004c0020t0005g0016	11	40	0.2750	7	c.550 others(26): Show c.550+29172_550+29173insTTTTGTA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	4/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147198232	C C	CTTTTTTT CTTTTTTT	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG02896.hp1 HG03139.hp1 HG02486.hp2 HG02896.hp1 HG03139.hp1	a0001 a0004 a0001 a0004	a0001c0003 a0001c0008 a0004c0020 a0001c0003 a0001c0008 a0004c0020	a0001c0003t0011 a0001c0008t0001 a0004c0020t0005 a0001c0003t0011 a0001c0008t0001 a0004c0020t0005	a0001c0003t0011g0023 a0001c0008t0001g0025 a0004c0020t0005g0016 a0001c0003t0011g0023 a0001c0008t0001g0025 a0004c0020t0005g0016	3	24	0.1250	7	c.134 others(28): Show c.1348+65738_1348+65744dupTTTTTTT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	8/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147242987	A A	ATTTTTTT ATTTTTTT	intron_variant intron_variant	MODIFIER	HG02630.hp2 HG02886.hp2 HG02922.hp2 others(3): Show HG02630.hp2 HG02886.hp2 HG02922.hp2 HG03239.hp2 NA18522.hp2 NA19030.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0004 others(2): Show a0001c0001 a0001c0002 a0001c0004 a0001c0005 a0002c0016	a0001c0001t0007 a0001c0002t0002 a0001c0004t0005 others(2): Show a0001c0001t0007 a0001c0002t0002 a0001c0004t0005 a0001c0005t0022 a0002c0016t0004	a0001c0001t0007g0018 a0001c0002t0002g0013 a0001c0002t0002g0040 others(3): Show a0001c0001t0007g0018 a0001c0002t0002g0013 a0001c0002t0002g0040 a0001c0004t0005g0004 a0001c0005t0022g0032 a0002c0016t0004g0024	6	7	0.8571	7	c.134 others(28): Show c.1349-57131_1349-57125dupTTTTTTT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	8/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147469506	A A	ATTTTTTT ATTTTTTT	intron_variant intron_variant	MODIFIER	HG02896.hp2 HG02897.hp2 HG03139.hp1 HG02896.hp2 HG02897.hp2 HG03139.hp1	a0001 a0001	a0001c0004 a0001c0008 a0001c0004 a0001c0008	a0001c0004t0003 a0001c0008t0001 a0001c0004t0003 a0001c0008t0001	a0001c0004t0003g0035 a0001c0004t0003g0036 a0001c0008t0001g0025 a0001c0004t0003g0035 a0001c0004t0003g0036 a0001c0008t0001g0025	3	24	0.1250	7	c.167 others(28): Show c.1671-16409_1671-16403dupTTTTTTT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	10/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147636424	C C	CTTTTTTG CTTTTTTG	intron_variant intron_variant	MODIFIER	HG02717.hp2 HG02886.hp2 NA19030.hp1 HG02717.hp2 HG02886.hp2 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0001 a0001c0005t0008 a0001c0005t0022 a0001c0001t0001 a0001c0005t0008 a0001c0005t0022	a0001c0001t0001g0038 a0001c0005t0008g0005 a0001c0005t0022g0032 a0001c0001t0001g0038 a0001c0005t0008g0005 a0001c0005t0022g0032	3	40	0.0750	7	c.189 others(26): Show c.1898-2676_1898-2675insGTTTTTT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	12/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147924143	C C	CTTTTTTT CTTTTTTT	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG02451.hp1 HG02451.hp2 others(23): Show HG01891.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02630.hp1 HG02630.hp2 HG02717.hp1 HG02717.hp2 HG02886.hp2 HG02896.hp1 HG02922.hp1 HG02922.hp2 HG02976.hp1 HG02976.hp2 HG03098.hp1 HG03139.hp1 HG03139.hp2 HG03225.hp1 HG03225.hp2 HG03540.hp1 HG03540.hp2 NA18522.hp1 NA19030.hp2 NA20129.hp1 NA21309.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0001 a0001c0002 a0001c0003 others(14): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0006 a0001c0008 a0001c0009 a0001c0011 a0001c0012 a0001c0013 a0001c0015 a0001c0018 a0002c0016 a0002c0017 a0003c0014 a0004c0020	a0001c0001t0001 a0001c0001t0002 a0001c0001t0007 others(23): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0007 a0001c0001t0012 a0001c0001t0018 a0001c0002t0001 a0001c0002t0002 a0001c0002t0010 a0001c0003t0004 a0001c0003t0011 a0001c0003t0020 a0001c0004t0005 a0001c0005t0008 a0001c0005t0022 a0001c0006t0009 a0001c0008t0001 a0001c0009t0019 a0001c0011t0016 a0001c0012t0004 a0001c0013t0003 a0001c0015t0001 a0001c0018t0002 a0002c0016t0004 a0002c0017t0015 a0003c0014t0021 a0004c0020t0005	a0001c0001t0001g0003 a0001c0001t0002g0006 a0001c0001t0007g0020 others(23): Show a0001c0001t0001g0003 a0001c0001t0002g0006 a0001c0001t0007g0020 a0001c0001t0012g0034 a0001c0001t0018g0001 a0001c0002t0001g0007 a0001c0002t0002g0013 a0001c0002t0010g0002 a0001c0003t0004g0029 a0001c0003t0011g0023 a0001c0003t0020g0017 a0001c0004t0005g0004 a0001c0005t0008g0005 a0001c0005t0022g0032 a0001c0006t0009g0028 a0001c0008t0001g0025 a0001c0009t0019g0027 a0001c0011t0016g0019 a0001c0012t0004g0026 a0001c0013t0003g0039 a0001c0015t0001g0011 a0001c0018t0002g0012 a0002c0016t0004g0024 a0002c0017t0015g0037 a0003c0014t0021g0022 a0004c0020t0005g0016	26	27	0.9630	7	c.225 others(28): Show c.2255+20429_2255+20435dupTTTTTTT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	14/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	148296545	C C	CAAAAAAA CAAAAAAA	intron_variant intron_variant	MODIFIER	HG02630.hp1 HG03139.hp1 HG03139.hp2 others(2): Show HG02630.hp1 HG03139.hp1 HG03139.hp2 NA19030.hp1 NA19030.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0008 a0001c0011 others(2): Show a0001c0001 a0001c0008 a0001c0011 a0001c0012 a0002c0016	a0001c0001t0001 a0001c0008t0001 a0001c0011t0016 others(2): Show a0001c0001t0001 a0001c0008t0001 a0001c0011t0016 a0001c0012t0004 a0002c0016t0004	a0001c0001t0001g0038 a0001c0008t0001g0025 a0001c0011t0016g0019 others(2): Show a0001c0001t0001g0038 a0001c0008t0001g0025 a0001c0011t0016g0019 a0001c0012t0004g0026 a0002c0016t0004g0024	5	9	0.5556	7	c.347 others(28): Show c.3475+29436_3475+29442dupAAAAAAA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	21/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	148328976	G G	GAAAAAAA GAAAAAAA	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG02630.hp1 HG02886.hp1 others(5): Show HG00735.hp2 HG02630.hp1 HG02886.hp1 HG02886.hp2 HG02896.hp2 HG02897.hp2 HG03225.hp1 HG03225.hp2	a0001 a0001	a0001c0003 a0001c0004 a0001c0005 others(4): Show a0001c0003 a0001c0004 a0001c0005 a0001c0009 a0001c0012 a0001c0018 a0001c0019	a0001c0003t0013 a0001c0004t0003 a0001c0005t0022 others(4): Show a0001c0003t0013 a0001c0004t0003 a0001c0005t0022 a0001c0009t0019 a0001c0012t0004 a0001c0018t0002 a0001c0019t0006	a0001c0003t0013g0010 a0001c0004t0003g0035 a0001c0004t0003g0036 others(5): Show a0001c0003t0013g0010 a0001c0004t0003g0035 a0001c0004t0003g0036 a0001c0005t0022g0032 a0001c0009t0019g0027 a0001c0012t0004g0026 a0001c0018t0002g0012 a0001c0019t0006g0015	8	12	0.6667	7	c.347 others(28): Show c.3476-54655_3476-54649dupAAAAAAA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	21/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP4_chr16_76272401_76565757	76499703	G G	GCCGCCTT GCCGCCTT	intron_variant intron_variant	MODIFIER	NA18612.hp2 NA18962.hp2 NA19063.hp1 NA18612.hp2 NA18962.hp2 NA19063.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0004 a0001c0001t0001 a0002c0002t0004	a0001c0001t0001g0232 a0002c0002t0004g0252 a0002c0002t0004g0253 a0001c0001t0001g0232 a0002c0002t0004g0252 a0002c0002t0004g0253	3	272	0.0110	7	c.236 others(26): Show c.2365+1010_2365+1011insCGCCTTC	CNTNAP4	ENSG00000152910.19	transcript	ENST00000611870.5	protein_coding	15/23	INFO_REALIGN_3_PRIME	chr16	TogoVar
CNTNAP5_chr2_124020287_124926219	124188716	C C	CAAAAAAA CAAAAAAA	intron_variant intron_variant	MODIFIER	HG02723.hp2 HG03225.hp1 HG03471.hp1 others(2): Show HG02723.hp2 HG03225.hp1 HG03471.hp1 NA20129.hp2 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0001t0007 a0001c0002t0002 others(2): Show a0001c0001t0002 a0001c0001t0007 a0001c0002t0002 a0001c0002t0006 a0001c0002t0019	a0001c0001t0002g0022 a0001c0001t0007g0025 a0001c0002t0002g0030 others(2): Show a0001c0001t0002g0022 a0001c0001t0007g0025 a0001c0002t0002g0030 a0001c0002t0006g0009 a0001c0002t0019g0051	5	31	0.1613	7	c.83- others(24): Show c.83-32973_83-32967dupAAAAAAA	CNTNAP5	ENSG00000155052.15	transcript	ENST00000682447.1	protein_coding	1/23	INFO_REALIGN_3_PRIME	chr2	TogoVar
CNTNAP5_chr2_124020287_124926219	124349874	C C	CTTTTTTT CTTTTTTT	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02922.hp1 HG03225.hp1 others(2): Show HG02451.hp1 HG02922.hp1 HG03225.hp1 HG03453.hp2 NA19240.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0002 a0001c0002t0004 others(1): Show a0001c0002t0001 a0001c0002t0002 a0001c0002t0004 a0001c0002t0019	a0001c0002t0001g0046 a0001c0002t0002g0031 a0001c0002t0004g0044 others(2): Show a0001c0002t0001g0046 a0001c0002t0002g0031 a0001c0002t0004g0044 a0001c0002t0004g0047 a0001c0002t0019g0051	5	8	0.6250	7	c.382 others(26): Show c.382-67547_382-67541dupTTTTTTT	CNTNAP5	ENSG00000155052.15	transcript	ENST00000682447.1	protein_coding	3/23	INFO_REALIGN_3_PRIME	chr2	TogoVar
CNTNAP5_chr2_124020287_124926219	124379622	G G	GCAAGTTT GCAAGTTT	intron_variant intron_variant	MODIFIER	HG02293.hp1 HG02717.hp2 HG03486.hp2 HG02293.hp1 HG02717.hp2 HG03486.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0001t0018 a0001c0002t0008 a0001c0001t0002 a0001c0001t0018 a0001c0002t0008	a0001c0001t0002g0050 a0001c0001t0018g0021 a0001c0002t0008g0058 a0001c0001t0002g0050 a0001c0001t0018g0021 a0001c0002t0008g0058	3	62	0.0484	7	c.382 others(26): Show c.382-37820_382-37814dupCAAGTTT	CNTNAP5	ENSG00000155052.15	transcript	ENST00000682447.1	protein_coding	3/23	INFO_REALIGN_3_PRIME	chr2	TogoVar
CNTNAP5_chr2_124020287_124926219	124451051	A A	AAAAAAAT AAAAAAAT	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG01261.hp1 HG02698.hp2 others(1): Show HG00423.hp1 HG01261.hp1 HG02698.hp2 HG02897.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 a0001c0001t0001 a0001c0001t0002 a0001c0001t0006	a0001c0001t0001g0020 a0001c0001t0002g0019 a0001c0001t0002g0049 others(1): Show a0001c0001t0001g0020 a0001c0001t0002g0019 a0001c0001t0002g0049 a0001c0001t0006g0040	4	21	0.1905	7	c.918 others(24): Show c.918+4115_918+4116insAAAAATA	CNTNAP5	ENSG00000155052.15	transcript	ENST00000682447.1	protein_coding	6/23	INFO_REALIGN_3_PRIME	chr2	TogoVar
CNTNAP5_chr2_124020287_124926219	124565538	G G	GAATAACA GAATAACA	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG02886.hp1 HG02922.hp1 others(4): Show HG02145.hp1 HG02886.hp1 HG02922.hp1 HG03453.hp1 HG03471.hp1 NA19043.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0003 a0001c0002t0001 others(3): Show a0001c0001t0001 a0001c0001t0003 a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0001c0002t0011	a0001c0001t0001g0033 a0001c0001t0003g0006 a0001c0002t0001g0053 others(4): Show a0001c0001t0001g0033 a0001c0001t0003g0006 a0001c0002t0001g0053 a0001c0002t0002g0030 a0001c0002t0002g0031 a0001c0002t0003g0004 a0001c0002t0011g0029	7	62	0.1129	7	c.175 others(26): Show c.1756+2216_1756+2222dupAATAACA	CNTNAP5	ENSG00000155052.15	transcript	ENST00000682447.1	protein_coding	11/23	INFO_REALIGN_3_PRIME	chr2	TogoVar
CNTNAP5_chr2_124020287_124926219	124629936	C C	CAAAAAAA CAAAAAAA	intron_variant intron_variant	MODIFIER	HG01069.hp2 HG01070.hp1 HG02451.hp1 others(5): Show HG01069.hp2 HG01070.hp1 HG02451.hp1 HG03130.hp2 HG03225.hp2 HG03453.hp2 NA19043.hp2 NA19240.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0004 a0001c0001 a0001c0002 a0002c0004	a0001c0001t0002 a0001c0001t0004 a0001c0001t0015 others(4): Show a0001c0001t0002 a0001c0001t0004 a0001c0001t0015 a0001c0002t0001 a0001c0002t0004 a0001c0002t0016 a0002c0004t0001	a0001c0001t0002g0043 a0001c0001t0004g0052 a0001c0001t0015g0037 others(5): Show a0001c0001t0002g0043 a0001c0001t0004g0052 a0001c0001t0015g0037 a0001c0002t0001g0046 a0001c0002t0004g0044 a0001c0002t0004g0047 a0001c0002t0016g0055 a0002c0004t0001g0001	8	25	0.3200	7	c.187 others(28): Show c.1877-17809_1877-17803dupAAAAAAA	CNTNAP5	ENSG00000155052.15	transcript	ENST00000682447.1	protein_coding	12/23	INFO_REALIGN_3_PRIME	chr2	TogoVar
COA1_chr7_43634257_43734523	43644710	T T	TTAGATGA TTAGATGA	intron_variant intron_variant	MODIFIER	HG01433.hp1 HG02451.hp2 HG02818.hp1 HG01433.hp1 HG02451.hp2 HG02818.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0045 a0001c0001t0001g0048 a0001c0001t0001g0237 a0001c0001t0001g0045 a0001c0001t0001g0048 a0001c0001t0001g0237	3	288	0.0104	7	c.264 others(22): Show c.264+540_264+541insTCATCTA	COA1	ENSG00000106603.20	transcript	ENST00000223336.11	protein_coding	4/5		chr7	TogoVar
COA1_chr7_43634257_43734523	43691272	A A	AAGAAAAG AAGAAAAG	intron_variant intron_variant	MODIFIER	HG01070.hp1 HG01074.hp1 HG01255.hp1 others(23): Show HG01070.hp1 HG01074.hp1 HG01255.hp1 HG01934.hp1 HG01943.hp2 HG01975.hp2 HG01993.hp1 HG02027.hp1 HG02148.hp2 HG02602.hp2 HG02647.hp1 HG02895.hp1 HG03540.hp2 HG03927.hp2 NA18943.hp2 NA18955.hp2 NA18961.hp2 NA18964.hp2 NA18965.hp1 NA18970.hp1 NA18980.hp2 NA18999.hp2 NA19063.hp1 NA19065.hp2 NA19074.hp1 NA19085.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0127 a0001c0001t0001g0164 a0001c0001t0001g0168 others(23): Show a0001c0001t0001g0127 a0001c0001t0001g0164 a0001c0001t0001g0168 a0001c0001t0001g0172 a0001c0001t0001g0173 a0001c0001t0001g0184 a0001c0001t0001g0190 a0001c0001t0001g0195 a0001c0001t0001g0200 a0001c0001t0001g0203 a0001c0001t0001g0205 a0001c0001t0001g0206 a0001c0001t0001g0207 a0001c0001t0001g0210 a0001c0001t0001g0211 a0001c0001t0001g0212 a0001c0001t0001g0213 a0001c0001t0001g0215 a0001c0001t0001g0218 a0001c0001t0001g0220 a0001c0001t0001g0221 a0001c0001t0001g0223 a0001c0001t0001g0225 a0001c0001t0001g0227 a0001c0001t0001g0228 a0001c0001t0001g0229	26	377	0.0690	7	c.-39 others(26): Show c.-39+38156_-39+38157insCTTTTCT	COA1	ENSG00000106603.20	transcript	ENST00000223336.11	protein_coding	1/5		chr7	TogoVar
COA8_chr14_103557960_103595896	103582737	C C	CTTTTTTT CTTTTTTT	intron_variant intron_variant	MODIFIER	HG01099.hp2 HG01167.hp2 HG01169.hp2 others(33): Show HG01099.hp2 HG01167.hp2 HG01169.hp2 HG01361.hp1 HG02055.hp1 HG02280.hp2 HG02486.hp2 HG02559.hp1 HG02572.hp2 HG02615.hp1 HG02615.hp2 HG02630.hp2 HG02647.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02809.hp1 HG02886.hp2 HG02965.hp2 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03139.hp1 HG03225.hp2 HG03486.hp2 HG03927.hp1 NA18906.hp1 NA19072.hp2 NA19074.hp1 NA19240.hp2 NA20300.hp1 NA20805.hp2 NA21309.hp1	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0004 a0005	a0001c0001 a0001c0010 a0002c0002 others(3): Show a0001c0001 a0001c0010 a0002c0002 a0003c0004 a0004c0005 a0005c0007	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(6): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0010t0001 a0002c0002t0001 a0003c0004t0001 a0004c0005t0001 a0004c0005t0005 a0005c0007t0003	a0001c0001t0001g0174 a0001c0001t0001g0179 a0001c0001t0001g0199 others(33): Show a0001c0001t0001g0174 a0001c0001t0001g0179 a0001c0001t0001g0199 a0001c0001t0001g0203 a0001c0001t0001g0205 a0001c0001t0001g0207 a0001c0001t0001g0208 a0001c0001t0001g0253 a0001c0001t0001g0312 a0001c0001t0001g0315 a0001c0001t0001g0316 a0001c0001t0001g0317 a0001c0001t0001g0318 a0001c0001t0002g0202 a0001c0001t0003g0277 a0001c0010t0001g0177 a0002c0002t0001g0104 a0002c0002t0001g0105 a0002c0002t0001g0127 a0002c0002t0001g0132 a0002c0002t0001g0152 a0003c0004t0001g0097 a0004c0005t0001g0314 a0004c0005t0001g0319 a0004c0005t0001g0320 a0004c0005t0001g0321 a0004c0005t0001g0322 a0004c0005t0001g0323 a0004c0005t0001g0324 a0004c0005t0001g0326 a0004c0005t0001g0327 a0004c0005t0001g0328 a0004c0005t0005g0325 a0005c0007t0003g0189 a0005c0007t0003g0190 a0005c0007t0003g0191	36	169	0.2130	7	c.386 others(24): Show c.386-4527_386-4521dupTTTTTTT	COA8	ENSG00000256053.9	transcript	ENST00000409074.8	protein_coding	3/4	INFO_REALIGN_3_PRIME	chr14	TogoVar
COA8_chr14_103557960_103595896	103586200	C C	CTTTTTTT CTTTTTTT	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(44): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00323.hp1 HG00558.hp1 HG00621.hp2 HG00673.hp1 HG00738.hp1 HG01168.hp2 HG01169.hp1 HG01257.hp2 HG01261.hp2 HG01993.hp1 HG02004.hp2 HG02083.hp2 HG02523.hp1 HG02735.hp1 HG03017.hp2 HG03209.hp2 HG03491.hp1 HG03492.hp1 NA18612.hp2 NA18941.hp1 NA18954.hp1 NA18963.hp2 NA18968.hp1 NA18969.hp2 NA18980.hp2 NA18983.hp2 NA18985.hp1 NA18994.hp2 NA18997.hp2 NA18998.hp1 NA19002.hp1 NA19003.hp2 NA19010.hp1 NA19056.hp2 NA19057.hp1 NA19060.hp1 NA19064.hp1 NA19080.hp1 NA19080.hp2 NA19084.hp1 NA19084.hp2 NA19089.hp1 NA20300.hp2 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0006 a0001c0001 a0001c0003 a0001c0006	a0001c0001t0001 a0001c0003t0001 a0001c0006t0001 a0001c0001t0001 a0001c0003t0001 a0001c0006t0001	a0001c0001t0001g0283 a0001c0001t0001g0286 a0001c0001t0001g0306 others(32): Show a0001c0001t0001g0283 a0001c0001t0001g0286 a0001c0001t0001g0306 a0001c0003t0001g0002 a0001c0003t0001g0004 a0001c0003t0001g0010 a0001c0003t0001g0012 a0001c0003t0001g0032 a0001c0003t0001g0035 a0001c0003t0001g0036 a0001c0003t0001g0037 a0001c0003t0001g0038 a0001c0003t0001g0041 a0001c0003t0001g0042 a0001c0003t0001g0043 a0001c0003t0001g0047 a0001c0003t0001g0048 a0001c0003t0001g0052 a0001c0003t0001g0053 a0001c0003t0001g0061 a0001c0003t0001g0068 a0001c0003t0001g0069 a0001c0003t0001g0070 a0001c0003t0001g0071 a0001c0003t0001g0072 a0001c0003t0001g0074 a0001c0003t0001g0080 a0001c0003t0001g0082 a0001c0003t0001g0083 a0001c0003t0001g0085 a0001c0003t0001g0087 a0001c0003t0001g0090 a0001c0003t0001g0092 a0001c0006t0001g0076 a0001c0006t0001g0079	47	266	0.1767	7	c.386 others(24): Show c.386-1058_386-1052dupTTTTTTT	COA8	ENSG00000256053.9	transcript	ENST00000409074.8	protein_coding	3/4	INFO_REALIGN_3_PRIME	chr14	TogoVar
COBL_chr7_51011212_51321809	51018891	C C	CAAAAAAA CAAAAAAA	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00140.hp1 HG03540.hp1 others(6): Show HG00099.hp2 HG00140.hp1 HG03540.hp1 HG03831.hp2 NA18982.hp2 NA18995.hp1 NA18995.hp2 NA19007.hp2 NA19086.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0007	a0001c0009 a0001c0019 a0001c0047 others(5): Show a0001c0009 a0001c0019 a0001c0047 a0002c0002 a0002c0004 a0003c0001 a0003c0011 a0007c0021	a0001c0009t0001 a0001c0019t0001 a0001c0047t0001 others(5): Show a0001c0009t0001 a0001c0019t0001 a0001c0047t0001 a0002c0002t0001 a0002c0004t0001 a0003c0001t0001 a0003c0011t0001 a0007c0021t0001	a0001c0009t0001g0056 a0001c0019t0001g0032 a0001c0047t0001g0216 others(6): Show a0001c0009t0001g0056 a0001c0019t0001g0032 a0001c0047t0001g0216 a0002c0002t0001g0135 a0002c0004t0001g0118 a0003c0001t0001g0148 a0003c0001t0001g0201 a0003c0011t0001g0057 a0007c0021t0001g0126	9	153	0.0588	7	c.376 others(26): Show c.3769-1330_3769-1324dupTTTTTTT	COBL	ENSG00000106078.19	transcript	ENST00000265136.12	protein_coding	12/12		chr7	TogoVar
COBL_chr7_51011212_51321809	51206491	C C	CAAAAAAA CAAAAAAA	intron_variant intron_variant	MODIFIER	HG02257.hp1 HG02280.hp1 HG02630.hp2 others(6): Show HG02257.hp1 HG02280.hp1 HG02630.hp2 HG02723.hp1 HG02886.hp2 HG03098.hp2 HG03130.hp1 NA19043.hp1 NA20129.hp2	a0001 a0002 a0024 a0001 a0002 a0024	a0001c0005 a0001c0008 a0001c0010 others(4): Show a0001c0005 a0001c0008 a0001c0010 a0001c0027 a0001c0034 a0002c0004 a0024c0042	a0001c0005t0008 a0001c0008t0002 a0001c0010t0005 others(6): Show a0001c0005t0008 a0001c0008t0002 a0001c0010t0005 a0001c0010t0007 a0001c0010t0012 a0001c0027t0009 a0001c0034t0005 a0002c0004t0001 a0024c0042t0001	a0001c0005t0008g0166 a0001c0008t0002g0162 a0001c0010t0005g0163 others(6): Show a0001c0005t0008g0166 a0001c0008t0002g0162 a0001c0010t0005g0163 a0001c0010t0007g0012 a0001c0010t0012g0114 a0001c0027t0009g0164 a0001c0034t0005g0181 a0002c0004t0001g0011 a0024c0042t0001g0165	9	199	0.0452	7	c.246 others(26): Show c.246-12909_246-12903dupTTTTTTT	COBL	ENSG00000106078.19	transcript	ENST00000265136.12	protein_coding	2/12		chr7	TogoVar
COG2_chr1_230637481_230698982	230653923	C C	CCTCATGA CCTCATGA	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00597.hp2 others(38): Show HG00099.hp1 HG00099.hp2 HG00597.hp2 HG00673.hp2 HG00733.hp2 HG01070.hp1 HG01071.hp2 HG01175.hp2 HG01256.hp1 HG01257.hp2 HG01361.hp2 HG01433.hp1 HG02027.hp2 HG02683.hp2 HG02717.hp2 HG02723.hp2 HG02738.hp1 HG03490.hp1 HG03491.hp2 HG03492.hp2 HG03942.hp2 NA18747.hp1 NA18948.hp1 NA18954.hp1 NA18959.hp2 NA18961.hp1 NA18964.hp2 NA18979.hp1 NA18981.hp1 NA18988.hp2 NA18989.hp1 NA19003.hp2 NA19043.hp2 NA19054.hp1 NA19065.hp2 NA19072.hp1 NA19079.hp1 NA19084.hp2 NA19091.hp1 NA19091.hp2 NA20129.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0008 a0002c0002 others(1): Show a0001c0001 a0001c0008 a0002c0002 a0002c0004	a0001c0001t0001 a0001c0008t0001 a0002c0002t0001 others(2): Show a0001c0001t0001 a0001c0008t0001 a0002c0002t0001 a0002c0002t0003 a0002c0004t0001	a0001c0001t0001g0100 a0001c0008t0001g0278 a0001c0008t0001g0279 others(27): Show a0001c0001t0001g0100 a0001c0008t0001g0278 a0001c0008t0001g0279 a0002c0002t0001g0004 a0002c0002t0001g0036 a0002c0002t0001g0037 a0002c0002t0001g0095 a0002c0002t0001g0096 a0002c0002t0001g0097 a0002c0002t0001g0098 a0002c0002t0001g0099 a0002c0002t0001g0101 a0002c0002t0001g0102 a0002c0002t0001g0103 a0002c0002t0001g0104 a0002c0002t0001g0105 a0002c0002t0001g0106 a0002c0002t0001g0107 a0002c0002t0001g0108 a0002c0002t0001g0109 a0002c0002t0001g0110 a0002c0002t0001g0112 a0002c0002t0001g0114 a0002c0002t0001g0248 a0002c0002t0001g0249 a0002c0002t0003g0111 a0002c0004t0001g0010 a0002c0004t0001g0011 a0002c0004t0001g0038 a0002c0004t0001g0113	41	404	0.1015	7	c.73- others(22): Show c.73-5539_73-5533dupTCATGAC	COG2	ENSG00000135775.14	transcript	ENST00000366669.9	protein_coding	1/17	INFO_REALIGN_3_PRIME	chr1	TogoVar
COG3_chr13_45459939_45541701	45486289	T T	TCGGGAGA TCGGGAGA	intron_variant intron_variant	MODIFIER	HG01257.hp1 HG01261.hp1 HG03669.hp1 others(2): Show HG01257.hp1 HG01261.hp1 HG03669.hp1 HG03942.hp2 HG04228.hp2	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0001 a0002c0004t0001	a0002c0004t0001g0011 a0002c0004t0001g0029 a0002c0004t0001g0030 others(2): Show a0002c0004t0001g0011 a0002c0004t0001g0029 a0002c0004t0001g0030 a0002c0004t0001g0031 a0002c0004t0001g0034	5	247	0.0202	7	c.844 others(22): Show c.844-156_844-150dupCGGGAGA	COG3	ENSG00000136152.15	transcript	ENST00000349995.10	protein_coding	7/22	INFO_REALIGN_3_PRIME	chr13	TogoVar
COG3_chr13_45459939_45541701	45489262	C C	CAAAAAAA CAAAAAAA	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG01192.hp1 HG02257.hp1 others(9): Show HG01109.hp2 HG01192.hp1 HG02257.hp1 HG02572.hp2 HG02896.hp2 HG03041.hp1 HG03225.hp1 HG03225.hp2 HG03453.hp1 HG03453.hp2 HG03486.hp1 HG03540.hp1	a0002 a0002	a0002c0003 a0002c0005 a0002c0007 a0002c0003 a0002c0005 a0002c0007	a0002c0003t0002 a0002c0005t0014 a0002c0007t0002 a0002c0003t0002 a0002c0005t0014 a0002c0007t0002	a0002c0003t0002g0202 a0002c0003t0002g0208 a0002c0003t0002g0209 others(9): Show a0002c0003t0002g0202 a0002c0003t0002g0208 a0002c0003t0002g0209 a0002c0003t0002g0210 a0002c0005t0014g0206 a0002c0007t0002g0223 a0002c0007t0002g0224 a0002c0007t0002g0225 a0002c0007t0002g0226 a0002c0007t0002g0227 a0002c0007t0002g0228 a0002c0007t0002g0232	12	15	0.8000	7	c.925 others(24): Show c.925-1641_925-1635dupAAAAAAA	COG3	ENSG00000136152.15	transcript	ENST00000349995.10	protein_coding	8/22	INFO_REALIGN_3_PRIME	chr13	TogoVar
COG3_chr13_45459939_45541701	45525634	G G	GTTTTTTT GTTTTTTT	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG01074.hp2 HG01934.hp2 others(5): Show HG00738.hp1 HG01074.hp2 HG01934.hp2 HG01943.hp1 HG02622.hp1 HG03041.hp2 HG03654.hp1 HG03831.hp1	a0001 a0002 a0001 a0002	a0001c0002 a0002c0003 a0001c0002 a0002c0003	a0001c0002t0001 a0001c0002t0007 a0002c0003t0002 a0001c0002t0001 a0001c0002t0007 a0002c0003t0002	a0001c0002t0001g0249 a0001c0002t0007g0304 a0002c0003t0002g0217 others(5): Show a0001c0002t0001g0249 a0001c0002t0007g0304 a0002c0003t0002g0217 a0002c0003t0002g0233 a0002c0003t0002g0234 a0002c0003t0002g0235 a0002c0003t0002g0236 a0002c0003t0002g0238	8	25	0.3200	7	c.223 others(24): Show c.2230+595_2230+601dupTTTTTTT	COG3	ENSG00000136152.15	transcript	ENST00000349995.10	protein_coding	20/22	INFO_REALIGN_3_PRIME	chr13	TogoVar
COG3_chr13_45459939_45541701	45526076	A A	ATTTTTTT ATTTTTTT	intron_variant intron_variant	MODIFIER	HG00408.hp2 HG00438.hp1 HG02630.hp2 others(5): Show HG00408.hp2 HG00438.hp1 HG02630.hp2 HG02717.hp1 HG02895.hp2 HG03942.hp1 NA18997.hp1 NA21309.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0006 a0001c0001 a0003c0006	a0001c0001t0001 a0003c0006t0004 a0003c0006t0015 a0001c0001t0001 a0003c0006t0004 a0003c0006t0015	a0001c0001t0001g0041 a0001c0001t0001g0059 a0001c0001t0001g0082 others(5): Show a0001c0001t0001g0041 a0001c0001t0001g0059 a0001c0001t0001g0082 a0001c0001t0001g0083 a0003c0006t0004g0196 a0003c0006t0004g0197 a0003c0006t0004g0201 a0003c0006t0015g0200	8	18	0.4444	7	c.223 others(26): Show c.2230+1049_2230+1055dupTTTTTTT	COG3	ENSG00000136152.15	transcript	ENST00000349995.10	protein_coding	20/22	INFO_REALIGN_3_PRIME	chr13	TogoVar
COG3_chr13_45459939_45541701	45529443	A A	ACTAGTGT ACTAGTGT	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02451.hp1 HG02970.hp2 HG02257.hp2 HG02451.hp1 HG02970.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0035 a0001c0002t0001g0036 a0001c0002t0001g0037 a0001c0002t0001g0035 a0001c0002t0001g0036 a0001c0002t0001g0037	3	340	0.0088	7	c.223 others(24): Show c.2231-345_2231-339dupAGTGTCT	COG3	ENSG00000136152.15	transcript	ENST00000349995.10	protein_coding	20/22	INFO_REALIGN_3_PRIME	chr13	TogoVar
COG4_chr16_70475571_70528554	70506593	C C	CAAAAAAA CAAAAAAA	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG02258.hp1 HG02486.hp1 others(4): Show HG00642.hp1 HG02258.hp1 HG02486.hp1 HG02559.hp2 HG02970.hp1 HG03516.hp2 HG03579.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0003t0001 a0001c0001t0001 a0001c0003t0001	a0001c0001t0001g0161 a0001c0003t0001g0126 a0001c0003t0001g0127 others(4): Show a0001c0001t0001g0161 a0001c0003t0001g0126 a0001c0003t0001g0127 a0001c0003t0001g0128 a0001c0003t0001g0135 a0001c0003t0001g0136 a0001c0003t0001g0320	7	106	0.0660	7	c.106 others(26): Show c.1061+1806_1061+1812dupTTTTTTT	COG4	ENSG00000103051.21	transcript	ENST00000323786.10	protein_coding	8/18		chr16	TogoVar

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