view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
CHRDL1_chrX_110668856_110800817 | 110689905 | C | CTATATAT others(1): Show |
intron_variant | MODIFIER | HG03225.hp1 HG03486.hp1 |
a0003 | a0003c0004 | a0003c0004t0004a0003c0004t0048 | a0003c0004t0004g0079 a0003c0004t0048g0145 |
2 | 172 | 0.0116 | 8 | c.779 others(25): Show |
CHRDL1 | ENSG00000101938.15 | transcript | ENST00000372042.6 | protein_coding | 8/11 | chrX | TogoVar | |||||||
CHRDL1_chrX_110668856_110800817 | 110689915 | A | ATATATAT others(1): Show |
intron_variant | MODIFIER | HG02630.hp1 HG03579.hp1 NA18985.hp1 others(1): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0005a0001c0001t0026a0001c0002t0006others(1): Show | a0001c0001t0005g0068 a0001c0001t0026g0164 a0001c0002t0006g0041 others(1): Show |
4 | 172 | 0.0233 | 8 | c.779 others(25): Show |
CHRDL1 | ENSG00000101938.15 | transcript | ENST00000372042.6 | protein_coding | 8/11 | chrX | TogoVar | |||||||
CHRDL1_chrX_110668856_110800817 | 110689933 | A | ATATATAT others(1): Show |
intron_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00280.hp1 others(26): Show |
a0001a0003 | a0001c0002a0003c0004 | a0001c0002t0003a0001c0002t0004a0001c0002t0006others(4): Show | a0001c0002t0003g0001 a0001c0002t0003g0004 a0001c0002t0003g0029 others(25): Show |
29 | 172 | 0.1686 | 8 | c.779 others(25): Show |
CHRDL1 | ENSG00000101938.15 | transcript | ENST00000372042.6 | protein_coding | 8/11 | chrX | TogoVar | |||||||
CHRDL1_chrX_110668856_110800817 | 110705304 | T | TATATACA others(1): Show |
intron_variant | MODIFIER | HG01243.hp1 HG02055.hp1 HG02809.hp1 others(3): Show |
a0001 | a0001c0001a0001c0002a0001c0006 | a0001c0001t0019a0001c0002t0003a0001c0002t0006others(3): Show | a0001c0001t0019g0005 a0001c0002t0003g0018 a0001c0002t0006g0020 others(3): Show |
6 | 172 | 0.0349 | 8 | c.542 others(25): Show |
CHRDL1 | ENSG00000101938.15 | transcript | ENST00000372042.6 | protein_coding | 6/11 | chrX | TogoVar | |||||||
CHRDL1_chrX_110668856_110800817 | 110721714 | T | TATCCATC others(1): Show |
intron_variant | MODIFIER | HG00741.hp1 | a0001 | a0001c0001 | a0001c0001t0029 | a0001c0001t0029g0138 | 1 | 172 | 0.0058 | 8 | c.302 others(23): Show |
CHRDL1 | ENSG00000101938.15 | transcript | ENST00000372042.6 | protein_coding | 4/11 | chrX | TogoVar | |||||||
CHRDL1_chrX_110668856_110800817 | 110747407 | A | AACACACA others(1): Show |
intron_variant | MODIFIER | HG03516.hp2 | a0001 | a0001c0002 | a0001c0002t0008 | a0001c0002t0008g0014 | 1 | 172 | 0.0058 | 8 | c.301 others(27): Show |
CHRDL1 | ENSG00000101938.15 | transcript | ENST00000372042.6 | protein_coding | 4/11 | chrX | TogoVar | |||||||
CHRDL1_chrX_110668856_110800817 | 110763558 | T | TATATACA others(1): Show |
intron_variant | MODIFIER | NA19240.hp2 | a0001 | a0001c0002 | a0001c0002t0003 | a0001c0002t0003g0171 | 1 | 172 | 0.0058 | 8 | c.95- others(21): Show |
CHRDL1 | ENSG00000101938.15 | transcript | ENST00000372042.6 | protein_coding | 2/11 | chrX | TogoVar | |||||||
CHRDL2_chr11_74691429_74736426 | 74719381 | T | TACACACA others(1): Show |
intron_variant | MODIFIER | HG01175.hp1 HG01361.hp1 HG01516.hp1 others(8): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(2): Show | a0001c0001t0001a0001c0002t0001a0001c0003t0002others(2): Show | a0001c0001t0001g0176 a0001c0002t0001g0171 a0001c0002t0001g0172 others(8): Show |
11 | 392 | 0.0281 | 8 | c.83- others(21): Show |
CHRDL2 | ENSG00000054938.17 | transcript | ENST00000376332.8 | protein_coding | 1/10 | chr11 | TogoVar | |||||||
CHRDL2_chr11_74691429_74736426 | 74736207 | T | TTAAATAA others(1): Show |
upstream_gene_variant | MODIFIER | HG00099.hp2 HG01070.hp1 HG01106.hp1 others(10): Show |
a0001a0004 | a0001c0002a0001c0003a0001c0004others(2): Show | a0001c0002t0001a0001c0003t0001a0001c0004t0003others(3): Show | a0001c0002t0001g0070 a0001c0002t0001g0145 a0001c0003t0001g0077 others(9): Show |
13 | 392 | 0.0332 | 8 | c.-53 others(19): Show |
CHRDL2 | ENSG00000054938.17 | transcript | ENST00000376332.8 | protein_coding | 4782 | chr11 | TogoVar | |||||||
CHRD_chr3_184375054_184394829 | 184388237 | G | GTCCATCC others(1): Show |
intron_variant | MODIFIER | HG02280.hp1 HG02622.hp2 HG02886.hp2 others(10): Show |
a0001a0005a0007 | a0001c0001a0001c0011a0005c0006others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0011t0001others(2): Show | a0001c0001t0001g0048 a0001c0001t0001g0123 a0001c0001t0002g0090 others(5): Show |
13 | 428 | 0.0304 | 8 | c.255 others(25): Show |
CHRD | ENSG00000090539.16 | transcript | ENST00000204604.6 | protein_coding | 20/22 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
CHRD_chr3_184375054_184394829 | 184388387 | G | GCATCCAT others(1): Show |
intron_variant | MODIFIER | HG00642.hp2 HG00741.hp2 HG01081.hp2 others(56): Show |
a0001a0002a0004 | a0001c0001a0001c0003a0001c0008others(7): Show | a0001c0001t0001a0001c0003t0001a0001c0008t0001others(7): Show | a0001c0001t0001g0043 a0001c0003t0001g0175 a0001c0008t0001g0132 others(21): Show |
59 | 428 | 0.1379 | 8 | c.255 others(25): Show |
CHRD | ENSG00000090539.16 | transcript | ENST00000204604.6 | protein_coding | 20/22 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
CHRFAM7A_chr15_30355566_30398540 | 30393889 | G | GTGTGTGT others(1): Show |
upstream_gene_variant | MODIFIER | HG01069.hp1 HG02559.hp2 HG02895.hp1 others(5): Show |
a0005 | a0005c0005 | a0005c0005t0005a0005c0005t0027 | a0005c0005t0005g0037 a0005c0005t0005g0038 a0005c0005t0005g0039 others(5): Show |
8 | 133 | 0.0602 | 8 | c.-79 others(17): Show |
CHRFAM7A | ENSG00000166664.15 | transcript | ENST00000299847.7 | protein_coding | 350 | chr15 | TogoVar | |||||||
CHRM1_chr11_62903679_62926363 | 62924629 | G | GCGCTCTC others(1): Show |
upstream_gene_variant | MODIFIER | HG00423.hp1 HG00423.hp2 HG00673.hp2 others(8): Show |
a0001a0002 | a0001c0001a0002c0004 | a0001c0001t0001a0002c0004t0001 | a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0021 others(3): Show |
11 | 420 | 0.0262 | 8 | c.-34 others(19): Show |
CHRM1 | ENSG00000168539.4 | transcript | ENST00000306960.4 | protein_coding | 3267 | chr11 | TogoVar | |||||||
CHRM1_chr11_62903679_62926363 | 62924629 | G | GCTCTCTC others(1): Show |
upstream_gene_variant | MODIFIER | HG00438.hp1 HG01891.hp1 HG02074.hp1 others(11): Show |
a0001a0002 | a0001c0001a0001c0002a0002c0004 | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(2): Show | a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0010 others(10): Show |
14 | 420 | 0.0333 | 8 | c.-34 others(19): Show |
CHRM1 | ENSG00000168539.4 | transcript | ENST00000306960.4 | protein_coding | 3267 | chr11 | TogoVar | |||||||
CHRM1_chr11_62903679_62926363 | 62924668 | C | CTATATAT others(1): Show |
upstream_gene_variant | MODIFIER | HG01099.hp2 HG02622.hp2 NA19057.hp1 |
a0001a0002 | a0001c0001a0002c0004 | a0001c0001t0001a0002c0004t0001 | a0001c0001t0001g0001 a0001c0001t0001g0142 a0002c0004t0001g0101 |
3 | 420 | 0.0071 | 8 | c.-35 others(19): Show |
CHRM1 | ENSG00000168539.4 | transcript | ENST00000306960.4 | protein_coding | 3306 | chr11 | TogoVar | |||||||
CHRM2_chr7_136863652_137025213 | 136910800 | A | AGTGTGTG others(1): Show |
intron_variant | MODIFIER | HG00099.hp2 HG00733.hp2 HG00735.hp2 others(37): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(12): Show | a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0006 others(37): Show |
40 | 320 | 0.1250 | 8 | c.-12 others(29): Show |
CHRM2 | ENSG00000181072.12 | transcript | ENST00000680005.1 | protein_coding | 2/3 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
CHRM2_chr7_136863652_137025213 | 136921794 | C | CTTTCTTT others(1): Show |
intron_variant | MODIFIER | HG00639.hp1 HG01891.hp1 HG02895.hp2 others(12): Show |
a0001 | a0001c0001 | a0001c0001t0004a0001c0001t0011a0001c0001t0013others(4): Show | a0001c0001t0004g0256 a0001c0001t0011g0002 a0001c0001t0011g0209 others(11): Show |
15 | 320 | 0.0469 | 8 | c.-12 others(29): Show |
CHRM2 | ENSG00000181072.12 | transcript | ENST00000680005.1 | protein_coding | 2/3 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
CHRM2_chr7_136863652_137025213 | 136933031 | A | AAAATAAA others(1): Show |
intron_variant | MODIFIER | HG02809.hp1 HG02886.hp1 HG02886.hp2 others(7): Show |
a0001a0005 | a0001c0001a0005c0008 | a0001c0001t0001a0001c0001t0005a0001c0001t0011others(4): Show | a0001c0001t0001g0312 a0001c0001t0005g0042 a0001c0001t0011g0002 others(6): Show |
10 | 320 | 0.0313 | 8 | c.-12 others(29): Show |
CHRM2 | ENSG00000181072.12 | transcript | ENST00000680005.1 | protein_coding | 2/3 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
CHRM2_chr7_136863652_137025213 | 136933049 | C | CATAAATA others(1): Show |
intron_variant | MODIFIER | HG02818.hp2 HG02922.hp2 NA18522.hp2 |
a0001 | a0001c0001 | a0001c0001t0031a0001c0001t0078a0001c0001t0080 | a0001c0001t0031g0096 a0001c0001t0078g0095 a0001c0001t0080g0097 |
3 | 320 | 0.0094 | 8 | c.-12 others(29): Show |
CHRM2 | ENSG00000181072.12 | transcript | ENST00000680005.1 | protein_coding | 2/3 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
CHRM2_chr7_136863652_137025213 | 136968721 | A | AATATATA others(1): Show |
intron_variant | MODIFIER | HG01261.hp2 HG02965.hp1 HG03130.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0009a0001c0001t0024a0001c0001t0043 | a0001c0001t0009g0295 a0001c0001t0009g0298 a0001c0001t0024g0221 others(1): Show |
4 | 320 | 0.0125 | 8 | c.-12 others(29): Show |
CHRM2 | ENSG00000181072.12 | transcript | ENST00000680005.1 | protein_coding | 2/3 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
CHRM2_chr7_136863652_137025213 | 137000547 | A | AGAAGGAA others(1): Show |
intron_variant | MODIFIER | HG00558.hp2 HG00639.hp1 HG00673.hp1 others(44): Show |
a0001a0006 | a0001c0001a0006c0006 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(21): Show | a0001c0001t0001g0034 a0001c0001t0001g0193 a0001c0001t0001g0196 others(44): Show |
47 | 320 | 0.1469 | 8 | c.-47 others(25): Show |
CHRM2 | ENSG00000181072.12 | transcript | ENST00000680005.1 | protein_coding | 3/3 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
CHRM3_chr1_239381568_239920450 | 239383056 | C | CTCTCTCT others(1): Show |
upstream_gene_variant | MODIFIER | HG00140.hp1 HG00438.hp1 HG00438.hp2 others(31): Show |
a0001a0003 | a0001c0001a0003c0004 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(19): Show | a0001c0001t0001g0052 a0001c0001t0001g0058 a0001c0001t0002g0048 others(31): Show |
34 | 116 | 0.2931 | 8 | c.-46 others(19): Show |
CHRM3 | ENSG00000133019.12 | transcript | ENST00000676153.1 | protein_coding | 3511 | chr1 | TogoVar | |||||||
CHRM3_chr1_239381568_239920450 | 239383367 | T | TTTTCTTT others(1): Show |
upstream_gene_variant | MODIFIER | HG02615.hp1 HG06807.hp2 NA18906.hp2 |
a0001 | a0001c0001 | a0001c0001t0009a0001c0001t0013a0001c0001t0014 | a0001c0001t0009g0111 a0001c0001t0013g0085 a0001c0001t0014g0095 |
3 | 116 | 0.0259 | 8 | c.-43 others(19): Show |
CHRM3 | ENSG00000133019.12 | transcript | ENST00000676153.1 | protein_coding | 3200 | chr1 | TogoVar | |||||||
CHRM3_chr1_239381568_239920450 | 239385815 | C | CTCTTTCT others(1): Show |
upstream_gene_variant | MODIFIER | HG02922.hp1 HG03041.hp1 |
a0001 | a0001c0001 | a0001c0001t0040a0001c0001t0054 | a0001c0001t0040g0102 a0001c0001t0054g0096 |
2 | 116 | 0.0172 | 8 | c.-19 others(19): Show |
CHRM3 | ENSG00000133019.12 | transcript | ENST00000676153.1 | protein_coding | 752 | chr1 | TogoVar | |||||||
CHRM3_chr1_239381568_239920450 | 239403976 | G | GGAGAGAG others(1): Show |
intron_variant | MODIFIER | HG00738.hp2 HG01433.hp2 HG01981.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0005a0001c0001t0015others(2): Show | a0001c0001t0001g0098 a0001c0001t0005g0053 a0001c0001t0015g0033 others(2): Show |
5 | 116 | 0.0431 | 8 | c.-52 others(29): Show |
CHRM3 | ENSG00000133019.12 | transcript | ENST00000676153.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
CHRM3_chr1_239381568_239920450 | 239404719 | A | AATATATA others(1): Show |
intron_variant | MODIFIER | HG00639.hp2 NA18955.hp2 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0017 | a0001c0001t0001g0010 a0001c0001t0017g0004 |
2 | 116 | 0.0172 | 8 | c.-52 others(29): Show |
CHRM3 | ENSG00000133019.12 | transcript | ENST00000676153.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
CHRM3_chr1_239381568_239920450 | 239479190 | C | CCACACAC others(1): Show |
intron_variant | MODIFIER | HG02922.hp2 HG03139.hp2 |
a0001 | a0001c0001 | a0001c0001t0006a0001c0001t0046 | a0001c0001t0006g0003 a0001c0001t0046g0100 |
2 | 116 | 0.0172 | 8 | c.-52 others(29): Show |
CHRM3 | ENSG00000133019.12 | transcript | ENST00000676153.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
CHRM3_chr1_239381568_239920450 | 239580689 | T | TTATATAT others(1): Show |
intron_variant | MODIFIER | HG00438.hp2 HG00609.hp1 HG02040.hp2 others(1): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0001c0001t0002a0002c0002t0002 | a0001c0001t0001g0002 a0001c0001t0001g0058 a0001c0001t0002g0059 others(1): Show |
4 | 116 | 0.0345 | 8 | c.-31 others(29): Show |
CHRM3 | ENSG00000133019.12 | transcript | ENST00000676153.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
CHRM3_chr1_239381568_239920450 | 239602127 | T | TATATATA others(1): Show |
intron_variant | MODIFIER | HG01106.hp1 HG02615.hp2 HG02922.hp2 others(3): Show |
a0001a0004 | a0001c0001a0004c0003 | a0001c0001t0004a0001c0001t0009a0001c0001t0019others(3): Show | a0001c0001t0004g0035 a0001c0001t0009g0045 a0001c0001t0019g0040 others(3): Show |
6 | 116 | 0.0517 | 8 | c.-31 others(29): Show |
CHRM3 | ENSG00000133019.12 | transcript | ENST00000676153.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
CHRM3_chr1_239381568_239920450 | 239610190 | C | CAAAAAAA others(1): Show |
intron_variant | MODIFIER | HG02258.hp2 HG03041.hp2 HG03927.hp2 others(1): Show |
a0001 | a0001c0001a0001c0005 | a0001c0001t0006a0001c0001t0021a0001c0001t0030others(1): Show | a0001c0001t0006g0065 a0001c0001t0021g0019 a0001c0001t0030g0023 others(1): Show |
4 | 116 | 0.0345 | 8 | c.-31 others(29): Show |
CHRM3 | ENSG00000133019.12 | transcript | ENST00000676153.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
CHRM3_chr1_239381568_239920450 | 239662105 | A | ATGTGTGT others(1): Show |
intron_variant | MODIFIER | HG01106.hp2 HG02723.hp2 HG03139.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0019a0001c0001t0020others(1): Show | a0001c0001t0003g0039 a0001c0001t0019g0025 a0001c0001t0020g0021 others(1): Show |
4 | 116 | 0.0345 | 8 | c.-24 others(29): Show |
CHRM3 | ENSG00000133019.12 | transcript | ENST00000676153.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
CHRM3_chr1_239381568_239920450 | 239672599 | T | TACACACA others(1): Show |
intron_variant | MODIFIER | HG01243.hp1 HG03041.hp1 HG03195.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0026a0001c0001t0038others(2): Show | a0001c0001t0001g0105 a0001c0001t0026g0091 a0001c0001t0038g0032 others(2): Show |
5 | 116 | 0.0431 | 8 | c.-24 others(27): Show |
CHRM3 | ENSG00000133019.12 | transcript | ENST00000676153.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
CHRM3_chr1_239381568_239920450 | 239679027 | G | GGATAGAT others(1): Show |
intron_variant | MODIFIER | HG00738.hp2 HG01106.hp2 HG01981.hp1 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0005a0001c0001t0025others(6): Show | a0001c0001t0001g0056 a0001c0001t0005g0053 a0001c0001t0025g0097 others(6): Show |
9 | 116 | 0.0776 | 8 | c.-14 others(25): Show |
CHRM3 | ENSG00000133019.12 | transcript | ENST00000676153.1 | protein_coding | 5/6 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
CHRM3_chr1_239381568_239920450 | 239684748 | G | GAGAAAGA others(1): Show |
intron_variant | MODIFIER | HG02818.hp1 NA20129.hp1 |
a0001 | a0001c0001 | a0001c0001t0021a0001c0001t0060 | a0001c0001t0021g0093 a0001c0001t0060g0001 |
2 | 116 | 0.0172 | 8 | c.-14 others(27): Show |
CHRM3 | ENSG00000133019.12 | transcript | ENST00000676153.1 | protein_coding | 5/6 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
CHRM3_chr1_239381568_239920450 | 239706617 | T | TACACACA others(1): Show |
intron_variant | MODIFIER | HG02818.hp1 NA18906.hp2 |
a0001 | a0001c0001 | a0001c0001t0014a0001c0001t0060 | a0001c0001t0014g0095 a0001c0001t0060g0001 |
2 | 116 | 0.0172 | 8 | c.-14 others(29): Show |
CHRM3 | ENSG00000133019.12 | transcript | ENST00000676153.1 | protein_coding | 5/6 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
CHRM3_chr1_239381568_239920450 | 239806417 | T | TACACACA others(1): Show |
intron_variant | MODIFIER | HG00140.hp2 HG00738.hp2 HG01243.hp1 others(24): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(16): Show | a0001c0001t0001g0013 a0001c0001t0001g0054 a0001c0001t0001g0109 others(24): Show |
27 | 116 | 0.2328 | 8 | c.-14 others(29): Show |
CHRM3 | ENSG00000133019.12 | transcript | ENST00000676153.1 | protein_coding | 5/6 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
CHRM3_chr1_239381568_239920450 | 239813916 | C | CAAAAAAA others(1): Show |
intron_variant | MODIFIER | HG01981.hp1 HG02615.hp1 HG02735.hp1 others(10): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0004a0001c0001t0005others(9): Show | a0001c0001t0001g0013 a0001c0001t0004g0016 a0001c0001t0004g0030 others(10): Show |
13 | 116 | 0.1121 | 8 | c.-14 others(29): Show |
CHRM3 | ENSG00000133019.12 | transcript | ENST00000676153.1 | protein_coding | 5/6 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
CHRM3_chr1_239381568_239920450 | 239834148 | T | TCACACAC others(1): Show |
intron_variant | MODIFIER | HG00140.hp2 HG00738.hp1 HG00738.hp2 others(11): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(8): Show | a0001c0001t0001g0052 a0001c0001t0001g0058 a0001c0001t0001g0083 others(11): Show |
14 | 116 | 0.1207 | 8 | c.-20 others(25): Show |
CHRM3 | ENSG00000133019.12 | transcript | ENST00000676153.1 | protein_coding | 6/6 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
CHRM3_chr1_239381568_239920450 | 239852688 | T | TTGCCCAT others(1): Show |
intron_variant | MODIFIER | HG02723.hp2 HG02818.hp1 HG03195.hp1 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0009a0001c0001t0018others(3): Show | a0001c0001t0003g0039 a0001c0001t0009g0111 a0001c0001t0018g0022 others(3): Show |
6 | 116 | 0.0517 | 8 | c.-20 others(27): Show |
CHRM3 | ENSG00000133019.12 | transcript | ENST00000676153.1 | protein_coding | 6/6 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
CHRM3_chr1_239381568_239920450 | 239859819 | T | TTATATAT others(1): Show |
intron_variant | MODIFIER | HG01255.hp1 HG01261.hp2 HG01496.hp1 others(5): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0010others(5): Show | a0001c0001t0001g0105 a0001c0001t0003g0066 a0001c0001t0010g0031 others(5): Show |
8 | 116 | 0.0690 | 8 | c.-20 others(27): Show |
CHRM3 | ENSG00000133019.12 | transcript | ENST00000676153.1 | protein_coding | 6/6 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
CHRM3_chr1_239381568_239920450 | 239881282 | C | CAAAAAAA others(1): Show |
intron_variant | MODIFIER | HG02040.hp2 HG03540.hp2 NA18955.hp1 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0008a0001c0001t0033 | a0001c0001t0001g0002 a0001c0001t0001g0013 a0001c0001t0001g0105 others(2): Show |
5 | 116 | 0.0431 | 8 | c.-19 others(27): Show |
CHRM3 | ENSG00000133019.12 | transcript | ENST00000676153.1 | protein_coding | 6/6 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
CHRM5_chr15_33963497_34072458 | 33968099 | T | TAAAAAAA others(1): Show |
upstream_gene_variant | MODIFIER | HG00408.hp1 HG00408.hp2 HG00438.hp1 others(21): Show |
a0001a0006 | a0001c0001a0001c0002a0006c0007 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(5): Show | a0001c0001t0001g0003 a0001c0001t0001g0082 a0001c0001t0001g0120 others(21): Show |
24 | 338 | 0.0710 | 8 | c.-14 others(19): Show |
CHRM5 | ENSG00000184984.10 | transcript | ENST00000383263.7 | protein_coding | 397 | chr15 | TogoVar | |||||||
CHRM5_chr15_33963497_34072458 | 33983160 | A | ATATATGT others(1): Show |
intron_variant | MODIFIER | HG02258.hp1 HG03486.hp1 HG03710.hp2 |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0004a0001c0001t0036 | a0001c0001t0003g0023 a0001c0001t0004g0204 a0001c0001t0036g0203 |
3 | 338 | 0.0089 | 8 | c.-40 others(29): Show |
CHRM5 | ENSG00000184984.10 | transcript | ENST00000383263.7 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
CHRM5_chr15_33963497_34072458 | 33983170 | G | GTGTGTAT others(1): Show |
intron_variant | MODIFIER | HG00140.hp2 HG00438.hp1 HG00544.hp1 others(61): Show |
a0001a0002a0003 | a0001c0001a0002c0003a0003c0004 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(8): Show | a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0080 others(61): Show |
64 | 338 | 0.1894 | 8 | c.-40 others(29): Show |
CHRM5 | ENSG00000184984.10 | transcript | ENST00000383263.7 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
CHRM5_chr15_33963497_34072458 | 34014367 | T | TAAAAAAA others(1): Show |
intron_variant | MODIFIER | HG02717.hp1 HG02723.hp2 HG02886.hp2 others(4): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0002c0010others(1): Show | a0001c0001t0004a0001c0002t0005a0002c0010t0011others(1): Show | a0001c0001t0004g0204 a0001c0002t0005g0058 a0001c0002t0005g0059 others(4): Show |
7 | 338 | 0.0207 | 8 | c.-40 others(29): Show |
CHRM5 | ENSG00000184984.10 | transcript | ENST00000383263.7 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
CHRM5_chr15_33963497_34072458 | 34032023 | G | GCACACAC others(1): Show |
intron_variant | MODIFIER | HG00099.hp2 HG00140.hp1 HG00408.hp2 others(98): Show |
a0001a0005a0006 | a0001c0001a0001c0006a0005c0008others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(12): Show | a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0082 others(97): Show |
101 | 338 | 0.2988 | 8 | c.-40 others(29): Show |
CHRM5 | ENSG00000184984.10 | transcript | ENST00000383263.7 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
CHRM5_chr15_33963497_34072458 | 34058555 | A | AACACACA others(1): Show |
intron_variant | MODIFIER | HG00140.hp2 HG00408.hp1 HG00544.hp1 others(89): Show |
a0001a0006 | a0001c0001a0001c0006a0006c0007 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(14): Show | a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0080 others(88): Show |
92 | 338 | 0.2722 | 8 | c.-75 others(25): Show |
CHRM5 | ENSG00000184984.10 | transcript | ENST00000383263.7 | protein_coding | 2/2 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
CHRNA10_chr11_3660587_3676384 | 3663063 | C | CTCATCTC others(1): Show |
downstream_gene_variant | MODIFIER | HG01243.hp2 HG02615.hp2 HG02818.hp1 others(7): Show |
a0001 | a0001c0001a0001c0008 | a0001c0001t0001a0001c0008t0001 | a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0005 others(2): Show |
10 | 450 | 0.0222 | 8 | c.*30 others(19): Show |
CHRNA10 | ENSG00000129749.3 | transcript | ENST00000250699.2 | protein_coding | 2523 | chr11 | TogoVar | |||||||
CHRNA10_chr11_3660587_3676384 | 3663094 | C | CTCATCTC others(1): Show |
downstream_gene_variant | MODIFIER | HG00140.hp1 HG00639.hp1 HG01361.hp1 others(29): Show |
a0001 | a0001c0001a0001c0015 | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(1): Show | a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0006 others(7): Show |
32 | 450 | 0.0711 | 8 | c.*30 others(19): Show |
CHRNA10 | ENSG00000129749.3 | transcript | ENST00000250699.2 | protein_coding | 2492 | chr11 | TogoVar | |||||||
CHRNA1_chr2_174742592_174769472 | 174759929 | T | TACACACA others(1): Show |
intron_variant | MODIFIER | HG02895.hp1 HG02897.hp1 HG02976.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0013 a0001c0001t0001g0087 |
5 | 370 | 0.0135 | 8 | c.44- others(21): Show |
CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | TogoVar |