Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
LCT_chr2_135782850_135842184	135795604	C C	CTAATAAT others(2): Show CTAATAATTA	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG01256.hp1 HG01928.hp2 others(21): Show HG00741.hp1 HG01256.hp1 HG01928.hp2 HG01943.hp1 HG01952.hp2 HG01975.hp2 HG02132.hp1 HG03490.hp2 HG03831.hp2 HG04115.hp2 NA18941.hp1 NA18945.hp1 NA18955.hp2 NA18967.hp2 NA18969.hp2 NA18972.hp1 NA18979.hp2 NA18982.hp1 NA19010.hp2 NA19063.hp1 NA19070.hp1 NA19077.hp2 NA19088.hp2 NA19091.hp1	a0002 a0003 a0002 a0003	a0002c0002 a0002c0009 a0003c0007 a0002c0002 a0002c0009 a0003c0007	a0002c0002t0001 a0002c0009t0001 a0003c0007t0001 a0002c0002t0001 a0002c0009t0001 a0003c0007t0001	a0002c0002t0001g0121 a0002c0002t0001g0126 a0002c0002t0001g0130 others(21): Show a0002c0002t0001g0121 a0002c0002t0001g0126 a0002c0002t0001g0130 a0002c0002t0001g0149 a0002c0002t0001g0153 a0002c0002t0001g0154 a0002c0002t0001g0156 a0002c0002t0001g0158 a0002c0002t0001g0159 a0002c0002t0001g0162 a0002c0002t0001g0172 a0002c0002t0001g0174 a0002c0002t0001g0178 a0002c0002t0001g0233 a0002c0002t0001g0234 a0002c0009t0001g0312 a0002c0009t0001g0313 a0002c0009t0001g0314 a0002c0009t0001g0315 a0002c0009t0001g0316 a0002c0009t0001g0317 a0002c0009t0001g0318 a0003c0007t0001g0097 a0003c0007t0001g0098	24	366	0.0656	9	c.497 others(26): Show c.4977-830_4977-829insTAATTATTA	LCT	ENSG00000115850.10	transcript	ENST00000264162.7	protein_coding	13/16			chr2	TogoVar
LDAF1_chr16_21153674_21185616	21167696	G G	GTTTTTTT others(2): Show GTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01081.hp1 HG01109.hp1 HG01256.hp2 others(9): Show HG01081.hp1 HG01109.hp1 HG01256.hp2 HG02132.hp2 HG02630.hp1 HG02723.hp2 HG03195.hp1 HG03486.hp1 HG03540.hp1 NA18967.hp2 NA19240.hp2 NA20129.hp1	a0001 a0003 a0004 others(1): Show a0001 a0003 a0004 a0006	a0001c0001 a0001c0006 a0003c0004 others(2): Show a0001c0001 a0001c0006 a0003c0004 a0004c0003 a0006c0011	a0001c0001t0001 a0001c0001t0003 a0001c0006t0011 others(3): Show a0001c0001t0001 a0001c0001t0003 a0001c0006t0011 a0003c0004t0004 a0004c0003t0001 a0006c0011t0009	a0001c0001t0001g0014 a0001c0001t0001g0054 a0001c0001t0003g0106 others(5): Show a0001c0001t0001g0014 a0001c0001t0001g0054 a0001c0001t0003g0106 a0001c0001t0003g0107 a0001c0006t0011g0081 a0003c0004t0004g0121 a0004c0003t0001g0040 a0006c0011t0009g0104	12	390	0.0308	9	c.97- others(24): Show c.97-2736_97-2728dupTTTTTTTTT	LDAF1	ENSG00000011638.11	transcript	ENST00000233047.9	protein_coding	2/4		INFO_REALIGN_3_PRIME	chr16	TogoVar
LDAH_chr2_20679031_20828101	20738253	A A	AAATAATA others(2): Show AAATAATAAT	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00639.hp2 HG00741.hp1 others(28): Show HG00099.hp2 HG00639.hp2 HG00741.hp1 HG01106.hp2 HG01192.hp1 HG01258.hp2 HG01358.hp1 HG01433.hp2 HG01516.hp2 HG01517.hp1 HG01884.hp1 HG02004.hp1 HG02257.hp2 HG02486.hp2 HG02622.hp2 HG02630.hp1 HG03139.hp1 HG03139.hp2 HG03209.hp1 HG03471.hp2 HG03486.hp2 HG03516.hp1 HG03516.hp2 HG03654.hp2 HG04199.hp1 HG06807.hp2 NA18968.hp1 NA19001.hp1 NA19066.hp2 NA19240.hp1 NA20300.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(4): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0002c0003t0001	a0001c0001t0001g0033 a0001c0001t0001g0121 a0001c0001t0001g0122 others(27): Show a0001c0001t0001g0033 a0001c0001t0001g0121 a0001c0001t0001g0122 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0150 a0001c0001t0001g0236 a0001c0001t0001g0244 a0001c0001t0001g0245 a0001c0001t0003g0204 a0001c0001t0003g0205 a0001c0001t0003g0212 a0001c0001t0003g0213 a0001c0001t0003g0218 a0001c0001t0004g0001 a0001c0001t0004g0011 a0001c0001t0004g0073 a0001c0001t0004g0074 a0001c0001t0004g0075 a0001c0001t0004g0080 a0001c0001t0004g0156 a0001c0001t0004g0188 a0001c0001t0005g0070 a0001c0001t0005g0225 a0001c0001t0005g0226 a0001c0001t0005g0227 a0001c0001t0005g0252 a0001c0001t0006g0242 a0001c0001t0007g0203 a0002c0003t0001g0237	31	258	0.1202	9	c.703 others(26): Show c.703+1709_703+1717dupATTATTATT	LDAH	ENSG00000118961.15	transcript	ENST00000237822.8	protein_coding	5/6			chr2	TogoVar
LDB2_chr4_16496541_16903645	16655896	C C	CTTTTTTT others(2): Show CTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG01071.hp1 HG01123.hp1 others(11): Show HG00741.hp1 HG01071.hp1 HG01123.hp1 HG02055.hp2 HG02083.hp2 HG02647.hp2 HG03139.hp2 HG03516.hp1 HG03516.hp2 HG03579.hp1 HG03831.hp1 HG04115.hp1 NA19240.hp1 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004	a0001c0001t0001g0005 a0001c0001t0001g0029 a0001c0001t0001g0036 others(11): Show a0001c0001t0001g0005 a0001c0001t0001g0029 a0001c0001t0001g0036 a0001c0001t0001g0048 a0001c0001t0001g0082 a0001c0001t0001g0102 a0001c0001t0001g0161 a0001c0001t0002g0043 a0001c0001t0002g0090 a0001c0001t0003g0003 a0001c0001t0003g0017 a0001c0001t0003g0037 a0001c0001t0003g0068 a0001c0001t0004g0062	14	162	0.0864	9	c.236 others(28): Show c.236-60030_236-60022dupAAAAAAAAA	LDB2	ENSG00000169744.13	transcript	ENST00000304523.10	protein_coding	2/7			chr4	TogoVar
LDB2_chr4_16496541_16903645	16791556	G G	GAAAAAAA others(2): Show GAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG01891.hp2 HG02965.hp1 others(3): Show HG01891.hp1 HG01891.hp2 HG02965.hp1 HG03139.hp1 HG03225.hp1 HG03486.hp2	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0001 a0001c0001t0003 a0001c0005t0001 a0001c0001t0001 a0001c0001t0003 a0001c0005t0001	a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0071 others(3): Show a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0071 a0001c0001t0001g0151 a0001c0001t0003g0138 a0001c0005t0001g0021	6	162	0.0370	9	c.133 others(28): Show c.133-32305_133-32297dupTTTTTTTTT	LDB2	ENSG00000169744.13	transcript	ENST00000304523.10	protein_coding	1/7			chr4	TogoVar
LDB2_chr4_16496541_16903645	16821746	C C	CAAAAAAA others(2): Show CAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG01192.hp1 HG01255.hp1 others(9): Show HG00741.hp2 HG01192.hp1 HG01255.hp1 HG01433.hp1 HG01934.hp1 HG01934.hp2 HG02602.hp2 HG04228.hp1 NA18983.hp1 NA18993.hp1 NA19070.hp2 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0009	a0001c0001t0001g0072 a0001c0001t0001g0076 a0001c0001t0001g0115 others(9): Show a0001c0001t0001g0072 a0001c0001t0001g0076 a0001c0001t0001g0115 a0001c0001t0001g0135 a0001c0001t0002g0040 a0001c0001t0002g0045 a0001c0001t0002g0089 a0001c0001t0002g0095 a0001c0001t0002g0109 a0001c0001t0003g0091 a0001c0001t0003g0133 a0001c0001t0009g0088	12	162	0.0741	9	c.133 others(28): Show c.133-62495_133-62487dupTTTTTTTTT	LDB2	ENSG00000169744.13	transcript	ENST00000304523.10	protein_coding	1/7			chr4	TogoVar
LDHAL6B_chr15_59201843_59213588	59209815	C C	CTTTTTTT others(2): Show CTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00423.hp2 HG01346.hp2 HG01943.hp2 others(9): Show HG00423.hp2 HG01346.hp2 HG01943.hp2 HG01952.hp2 HG01975.hp2 HG02056.hp1 HG02735.hp2 HG02738.hp1 HG02886.hp2 NA18968.hp2 NA19004.hp1 NA20752.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0003 a0001c0003t0003	a0001c0003t0003g0000 a0001c0003t0003g0000	12	448	0.0268	9	c.17 others(20): Show c.1729_*1730insTTTTTTTTT	LDHAL6B	ENSG00000171989.6	transcript	ENST00000307144.6	protein_coding		1228		chr15	TogoVar
LDHA_chr11_18389563_18413425	18401955	C C	CTCTCTCT others(2): Show CTCTCTCTTT	intron_variant intron_variant	MODIFIER	HG02818.hp1 HG02895.hp2 HG02965.hp2 others(5): Show HG02818.hp1 HG02895.hp2 HG02965.hp2 HG03209.hp2 HG03453.hp1 HG03540.hp2 NA18522.hp1 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0013 a0001c0001t0004g0196 a0001c0001t0004g0198 others(2): Show a0001c0001t0004g0013 a0001c0001t0004g0196 a0001c0001t0004g0198 a0001c0001t0004g0199 a0001c0001t0004g0209	8	390	0.0205	9	c.419 others(24): Show c.419-884_419-883insCTCTCTTTT	LDHA	ENSG00000134333.15	transcript	ENST00000422447.8	protein_coding	4/7		INFO_REALIGN_3_PRIME	chr11	TogoVar
LDHC_chr11_18407318_18457063	18422996	A A	AAACAACA others(2): Show AAACAACAAC	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG00733.hp1 HG00735.hp1 others(41): Show HG00323.hp2 HG00733.hp1 HG00735.hp1 HG01070.hp2 HG01167.hp1 HG01358.hp2 HG01433.hp2 HG01981.hp1 HG02074.hp2 HG02257.hp1 HG02258.hp1 HG02486.hp2 HG02559.hp2 HG02622.hp1 HG02630.hp1 HG02818.hp1 HG02895.hp1 HG02895.hp2 HG02896.hp2 HG02897.hp2 HG02965.hp2 HG03041.hp1 HG03209.hp1 HG03453.hp2 HG03486.hp2 HG03540.hp2 HG03654.hp2 HG03688.hp1 HG03834.hp1 HG03942.hp1 HG04184.hp2 NA18522.hp1 NA18906.hp1 NA18946.hp1 NA18962.hp2 NA18968.hp1 NA18977.hp2 NA19043.hp1 NA19070.hp1 NA19075.hp2 NA19079.hp1 NA19240.hp1 NA20752.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0005 a0001 a0002 a0005	a0001c0001 a0002c0002 a0005c0004 a0001c0001 a0002c0002 a0005c0004	a0001c0001t0002 a0002c0002t0002 a0005c0004t0006 a0001c0001t0002 a0002c0002t0002 a0005c0004t0006	a0001c0001t0002g0006 a0001c0001t0002g0018 a0001c0001t0002g0019 others(38): Show a0001c0001t0002g0006 a0001c0001t0002g0018 a0001c0001t0002g0019 a0001c0001t0002g0020 a0001c0001t0002g0021 a0001c0001t0002g0022 a0001c0001t0002g0023 a0001c0001t0002g0027 a0001c0001t0002g0028 a0001c0001t0002g0029 a0001c0001t0002g0030 a0001c0001t0002g0031 a0001c0001t0002g0032 a0001c0001t0002g0033 a0001c0001t0002g0034 a0001c0001t0002g0035 a0001c0001t0002g0036 a0001c0001t0002g0038 a0001c0001t0002g0039 a0001c0001t0002g0040 a0001c0001t0002g0041 a0001c0001t0002g0042 a0001c0001t0002g0043 a0001c0001t0002g0044 a0001c0001t0002g0045 a0001c0001t0002g0046 a0001c0001t0002g0047 a0001c0001t0002g0048 a0001c0001t0002g0049 a0001c0001t0002g0050 a0001c0001t0002g0051 a0001c0001t0002g0052 a0002c0002t0002g0004 a0002c0002t0002g0016 a0002c0002t0002g0017 a0002c0002t0002g0024 a0002c0002t0002g0025 a0002c0002t0002g0026 a0002c0002t0002g0037 a0005c0004t0006g0012 a0005c0004t0006g0013	44	348	0.1264	9	c.245 others(26): Show c.245-6733_245-6732insCAACAACAA	LDHC	ENSG00000166796.12	transcript	ENST00000541669.6	protein_coding	3/7		INFO_REALIGN_3_PRIME	chr11	TogoVar
LDHC_chr11_18407318_18457063	18449428	T T	TAAAAAAA others(2): Show TAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG00735.hp2 HG02145.hp2 others(5): Show HG00642.hp2 HG00735.hp2 HG02145.hp2 NA18973.hp1 NA18991.hp1 NA18994.hp1 NA19086.hp2 NA19088.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0005 a0001c0001t0001 a0001c0001t0005	a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0187 others(5): Show a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0187 a0001c0001t0001g0214 a0001c0001t0001g0223 a0001c0001t0001g0228 a0001c0001t0001g0235 a0001c0001t0005g0270	8	348	0.0230	9	c.835 others(26): Show c.835-1510_835-1502dupAAAAAAAAA	LDHC	ENSG00000166796.12	transcript	ENST00000541669.6	protein_coding	7/7		INFO_REALIGN_3_PRIME	chr11	TogoVar
LDLRAD3_chr11_35939062_36237136	36011566	C C	CCTTTTAA others(2): Show CCTTTTAATA	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00558.hp1 others(186): Show HG00099.hp1 HG00099.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp2 HG00741.hp1 HG00741.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01109.hp1 HG01167.hp1 HG01167.hp2 HG01175.hp2 HG01192.hp1 HG01256.hp1 HG01256.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01361.hp1 HG01361.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01891.hp2 HG01934.hp1 HG01934.hp2 HG01952.hp1 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02056.hp2 HG02074.hp1 HG02074.hp2 HG02109.hp2 HG02129.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp1 HG02486.hp1 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02683.hp1 HG02683.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02809.hp1 HG02886.hp1 HG02895.hp1 HG02896.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp2 HG03139.hp2 HG03209.hp1 HG03225.hp1 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03486.hp2 HG03492.hp1 HG03492.hp2 HG03540.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18612.hp1 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18906.hp1 NA18943.hp1 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18949.hp1 NA18949.hp2 NA18951.hp1 NA18951.hp2 NA18952.hp1 NA18952.hp2 NA18957.hp1 NA18957.hp2 NA18965.hp1 NA18965.hp2 NA18970.hp1 NA18970.hp2 NA18975.hp1 NA18975.hp2 NA18979.hp1 NA18979.hp2 NA18981.hp1 NA18981.hp2 NA18999.hp1 NA18999.hp2 NA19002.hp1 NA19002.hp2 NA19012.hp1 NA19012.hp2 NA19056.hp1 NA19056.hp2 NA19066.hp1 NA19066.hp2 NA19068.hp1 NA19068.hp2 NA19079.hp1 NA19079.hp2 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19085.hp2 NA19087.hp1 NA19087.hp2 NA19088.hp1 NA19088.hp2 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(5): Show a0001 a0002 a0003 a0004 a0005 a0006 a0007 a0008	a0001c0001 a0001c0002 a0002c0003 others(8): Show a0001c0001 a0001c0002 a0002c0003 a0002c0004 a0002c0006 a0003c0005 a0004c0010 a0005c0009 a0006c0007 a0007c0012 a0008c0008	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(40): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 a0001c0001t0012 a0001c0001t0015 a0001c0001t0016 a0001c0001t0019 a0001c0001t0020 a0001c0001t0023 a0001c0001t0024 a0001c0001t0025 a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0001c0002t0004 a0001c0002t0005 a0001c0002t0006 a0001c0002t0007 a0001c0002t0008 a0001c0002t0009 a0001c0002t0011 a0001c0002t0013 a0001c0002t0017 a0001c0002t0018 a0001c0002t0022 a0002c0003t0001 a0002c0004t0001 a0002c0004t0004 a0002c0006t0001 a0003c0005t0004 a0004c0010t0001 a0005c0009t0006 a0006c0007t0001 a0007c0012t0002 a0008c0008t0001	a0001c0001t0001g0005 a0001c0001t0001g0020 a0001c0001t0001g0022 others(186): Show a0001c0001t0001g0005 a0001c0001t0001g0020 a0001c0001t0001g0022 a0001c0001t0001g0024 a0001c0001t0001g0027 a0001c0001t0001g0030 a0001c0001t0001g0031 a0001c0001t0001g0035 a0001c0001t0001g0037 a0001c0001t0001g0040 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0058 a0001c0001t0001g0060 a0001c0001t0001g0065 a0001c0001t0001g0073 a0001c0001t0001g0079 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0100 a0001c0001t0001g0103 a0001c0001t0001g0105 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0117 a0001c0001t0001g0118 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0123 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0001g0138 a0001c0001t0001g0140 a0001c0001t0001g0142 a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0150 a0001c0001t0001g0151 a0001c0001t0001g0154 a0001c0001t0001g0166 a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0172 a0001c0001t0001g0173 a0001c0001t0001g0174 a0001c0001t0001g0175 a0001c0001t0001g0207 a0001c0001t0001g0214 a0001c0001t0001g0222 a0001c0001t0002g0033 a0001c0001t0002g0062 a0001c0001t0002g0069 a0001c0001t0002g0078 a0001c0001t0002g0088 a0001c0001t0002g0104 a0001c0001t0002g0122 a0001c0001t0002g0124 a0001c0001t0002g0131 a0001c0001t0002g0132 a0001c0001t0002g0144 a0001c0001t0002g0171 a0001c0001t0002g0191 a0001c0001t0002g0195 a0001c0001t0002g0213 a0001c0001t0003g0023 a0001c0001t0003g0025 a0001c0001t0003g0029 a0001c0001t0003g0051 a0001c0001t0003g0052 a0001c0001t0003g0063 a0001c0001t0003g0066 a0001c0001t0003g0071 a0001c0001t0003g0075 a0001c0001t0003g0076 a0001c0001t0003g0082 a0001c0001t0003g0109 a0001c0001t0003g0111 a0001c0001t0003g0153 a0001c0001t0003g0177 a0001c0001t0003g0224 a0001c0001t0004g0016 a0001c0001t0004g0162 a0001c0001t0005g0181 a0001c0001t0006g0012 a0001c0001t0006g0014 a0001c0001t0006g0203 a0001c0001t0007g0045 a0001c0001t0008g0143 a0001c0001t0009g0007 a0001c0001t0009g0042 a0001c0001t0009g0043 a0001c0001t0010g0064 a0001c0001t0010g0106 a0001c0001t0010g0108 a0001c0001t0010g0178 a0001c0001t0011g0036 a0001c0001t0011g0211 a0001c0001t0012g0001 a0001c0001t0012g0008 a0001c0001t0015g0204 a0001c0001t0016g0034 a0001c0001t0019g0098 a0001c0001t0020g0010 a0001c0001t0023g0057 a0001c0001t0024g0141 a0001c0001t0025g0201 a0001c0002t0001g0017 a0001c0002t0001g0021 a0001c0002t0001g0028 a0001c0002t0001g0061 a0001c0002t0001g0067 a0001c0002t0001g0068 a0001c0002t0001g0083 a0001c0002t0001g0089 a0001c0002t0001g0090 a0001c0002t0001g0099 a0001c0002t0001g0113 a0001c0002t0001g0116 a0001c0002t0001g0130 a0001c0002t0001g0137 a0001c0002t0001g0139 a0001c0002t0001g0147 a0001c0002t0001g0152 a0001c0002t0001g0157 a0001c0002t0001g0158 a0001c0002t0001g0159 a0001c0002t0001g0160 a0001c0002t0001g0163 a0001c0002t0001g0165 a0001c0002t0001g0167 a0001c0002t0001g0176 a0001c0002t0001g0183 a0001c0002t0001g0186 a0001c0002t0001g0193 a0001c0002t0001g0196 a0001c0002t0001g0212 a0001c0002t0002g0006 a0001c0002t0002g0026 a0001c0002t0002g0050 a0001c0002t0002g0134 a0001c0002t0002g0217 a0001c0002t0003g0077 a0001c0002t0003g0080 a0001c0002t0003g0110 a0001c0002t0003g0128 a0001c0002t0003g0133 a0001c0002t0004g0019 a0001c0002t0004g0048 a0001c0002t0004g0155 a0001c0002t0004g0197 a0001c0002t0005g0070 a0001c0002t0005g0156 a0001c0002t0006g0049 a0001c0002t0006g0180 a0001c0002t0007g0084 a0001c0002t0008g0011 a0001c0002t0008g0039 a0001c0002t0009g0206 a0001c0002t0011g0216 a0001c0002t0013g0184 a0001c0002t0013g0185 a0001c0002t0017g0182 a0001c0002t0018g0129 a0001c0002t0022g0101 a0002c0003t0001g0003 a0002c0003t0001g0004 a0002c0003t0001g0228 a0002c0003t0001g0229 a0002c0004t0001g0226 a0002c0004t0001g0230 a0002c0004t0001g0232 a0002c0004t0004g0231 a0002c0006t0001g0227 a0003c0005t0004g0112 a0004c0010t0001g0041 a0005c0009t0006g0208 a0006c0007t0001g0223 a0007c0012t0002g0107 a0008c0008t0001g0032	189	236	0.8009	9	c.47- others(26): Show c.47-24535_47-24534insTTTAATACT	LDLRAD3	ENSG00000179241.13	transcript	ENST00000315571.6	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr11	TogoVar
LDLRAD3_chr11_35939062_36237136	36233102	T T	TGTTTGTT others(2): Show TGTTTGTTTG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp1 HG00597.hp2 HG00609.hp2 others(20): Show HG00099.hp1 HG00597.hp2 HG00609.hp2 HG00639.hp2 HG00642.hp1 HG01071.hp1 HG01175.hp2 HG01261.hp2 HG01346.hp1 HG02074.hp2 HG02165.hp2 HG03831.hp1 NA18612.hp1 NA18747.hp1 NA18951.hp1 NA18952.hp1 NA18957.hp1 NA18970.hp2 NA19056.hp2 NA19066.hp2 NA19084.hp2 NA19085.hp2 NA19087.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0003 a0001c0002t0003 a0001c0001t0003 a0001c0002t0003	a0001c0001t0003g0023 a0001c0001t0003g0025 a0001c0001t0003g0029 others(20): Show a0001c0001t0003g0023 a0001c0001t0003g0025 a0001c0001t0003g0029 a0001c0001t0003g0051 a0001c0001t0003g0052 a0001c0001t0003g0063 a0001c0001t0003g0066 a0001c0001t0003g0071 a0001c0001t0003g0075 a0001c0001t0003g0076 a0001c0001t0003g0082 a0001c0001t0003g0109 a0001c0001t0003g0111 a0001c0001t0003g0153 a0001c0001t0003g0177 a0001c0001t0003g0190 a0001c0001t0003g0194 a0001c0001t0003g0224 a0001c0002t0003g0077 a0001c0002t0003g0080 a0001c0002t0003g0110 a0001c0002t0003g0128 a0001c0002t0003g0133	23	236	0.0975	9	c.37 others(20): Show c.3705_*3706insGTTTGTTTG	LDLRAD3	ENSG00000179241.13	transcript	ENST00000315571.6	protein_coding		967		chr11	TogoVar
LDLRAD4_chr18_13213760_13657751	13226180	C C	CTTTTTTT others(2): Show CTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00140.hp2 HG00558.hp1 others(39): Show HG00099.hp2 HG00140.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp2 HG00609.hp1 HG01074.hp2 HG01169.hp2 HG01192.hp2 HG01243.hp1 HG01255.hp1 HG01515.hp1 HG01515.hp2 HG01516.hp1 HG02027.hp2 HG02074.hp2 HG02080.hp2 HG02257.hp1 HG02451.hp1 HG02602.hp1 HG02630.hp1 HG02630.hp2 HG02698.hp2 HG02886.hp2 HG02976.hp2 HG03471.hp1 HG03579.hp1 HG03831.hp1 HG03927.hp1 NA18942.hp1 NA18954.hp1 NA18954.hp2 NA18966.hp2 NA18971.hp2 NA18977.hp1 NA18980.hp1 NA18998.hp1 NA18998.hp2 NA19004.hp1 NA19060.hp1 NA19060.hp2 NA20752.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(18): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0007 a0001c0001t0011 a0001c0001t0013 a0001c0001t0020 a0001c0001t0022 a0001c0001t0024 a0001c0001t0032 a0001c0001t0034 a0001c0001t0035 a0001c0001t0042 a0001c0001t0047 a0001c0001t0049 a0001c0001t0050 a0001c0001t0055 a0001c0001t0062 a0001c0001t0064 a0001c0001t0066 a0001c0002t0014	a0001c0001t0001g0014 a0001c0001t0001g0065 a0001c0001t0001g0104 others(39): Show a0001c0001t0001g0014 a0001c0001t0001g0065 a0001c0001t0001g0104 a0001c0001t0001g0110 a0001c0001t0001g0116 a0001c0001t0001g0119 a0001c0001t0001g0140 a0001c0001t0001g0152 a0001c0001t0001g0167 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0101 a0001c0001t0002g0117 a0001c0001t0002g0139 a0001c0001t0002g0164 a0001c0001t0002g0165 a0001c0001t0002g0166 a0001c0001t0002g0170 a0001c0001t0003g0018 a0001c0001t0003g0024 a0001c0001t0003g0032 a0001c0001t0003g0100 a0001c0001t0003g0121 a0001c0001t0003g0137 a0001c0001t0007g0025 a0001c0001t0011g0017 a0001c0001t0013g0169 a0001c0001t0020g0178 a0001c0001t0022g0004 a0001c0001t0024g0161 a0001c0001t0032g0122 a0001c0001t0034g0102 a0001c0001t0035g0118 a0001c0001t0042g0120 a0001c0001t0047g0114 a0001c0001t0049g0067 a0001c0001t0050g0168 a0001c0001t0055g0016 a0001c0001t0062g0033 a0001c0001t0064g0003 a0001c0001t0066g0115 a0001c0002t0014g0123	42	178	0.2360	9	c.-46 others(28): Show c.-467+7205_-467+7213dupTTTTTTTTT	LDLRAD4	ENSG00000168675.19	transcript	ENST00000359446.11	protein_coding	1/6		INFO_REALIGN_3_PRIME	chr18	TogoVar
LDLRAD4_chr18_13213760_13657751	13443709	T T	TCTCCTCC others(2): Show TCTCCTCCTC	intron_variant intron_variant	MODIFIER	HG00558.hp2 HG00597.hp2 HG01192.hp1 others(14): Show HG00558.hp2 HG00597.hp2 HG01192.hp1 HG03704.hp1 NA18939.hp2 NA18945.hp2 NA18959.hp2 NA18964.hp1 NA18964.hp2 NA18977.hp2 NA18980.hp1 NA18984.hp1 NA18998.hp2 NA19004.hp2 NA19060.hp1 NA19060.hp2 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0013 a0001c0001t0016 a0001c0001t0038 a0001c0001t0041 a0001c0001t0065	a0001c0001t0001g0013 a0001c0001t0001g0089 a0001c0001t0001g0116 others(14): Show a0001c0001t0001g0013 a0001c0001t0001g0089 a0001c0001t0001g0116 a0001c0001t0001g0167 a0001c0001t0002g0008 a0001c0001t0002g0164 a0001c0001t0002g0165 a0001c0001t0002g0166 a0001c0001t0003g0002 a0001c0001t0003g0006 a0001c0001t0003g0094 a0001c0001t0013g0005 a0001c0001t0013g0169 a0001c0001t0016g0070 a0001c0001t0038g0012 a0001c0001t0041g0029 a0001c0001t0065g0113	17	178	0.0955	9	c.181 others(26): Show c.181+5333_181+5341dupTCCTCCTCC	LDLRAD4	ENSG00000168675.19	transcript	ENST00000359446.11	protein_coding	4/6		INFO_REALIGN_3_PRIME	chr18	TogoVar
LDLRAD4_chr18_13213760_13657751	13578827	C C	CTTTTTTT others(2): Show CTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00597.hp2 HG01516.hp2 HG02145.hp1 others(2): Show HG00597.hp2 HG01516.hp2 HG02145.hp1 HG02486.hp1 HG03486.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0005 a0001c0001t0013 others(2): Show a0001c0001t0002 a0001c0001t0005 a0001c0001t0013 a0001c0001t0017 a0001c0001t0033	a0001c0001t0002g0090 a0001c0001t0005g0135 a0001c0001t0013g0169 others(2): Show a0001c0001t0002g0090 a0001c0001t0005g0135 a0001c0001t0013g0169 a0001c0001t0017g0088 a0001c0001t0033g0082	5	178	0.0281	9	c.182 others(28): Show c.182-42270_182-42262dupTTTTTTTTT	LDLRAD4	ENSG00000168675.19	transcript	ENST00000359446.11	protein_coding	4/6		INFO_REALIGN_3_PRIME	chr18	TogoVar
LDLR_chr19_11084463_11138820	11092202	T T	TTTATTAT others(2): Show TTTATTATTA	intron_variant intron_variant	MODIFIER	HG01952.hp1 HG02559.hp1 HG02615.hp1 others(3): Show HG01952.hp1 HG02559.hp1 HG02615.hp1 HG03195.hp1 HG03453.hp1 NA19068.hp1	a0001 a0002 a0001 a0002	a0001c0004 a0001c0013 a0002c0005 a0001c0004 a0001c0013 a0002c0005	a0001c0004t0003 a0001c0004t0009 a0001c0013t0009 others(1): Show a0001c0004t0003 a0001c0004t0009 a0001c0013t0009 a0002c0005t0002	a0001c0004t0003g0063 a0001c0004t0009g0003 a0001c0004t0009g0011 others(2): Show a0001c0004t0003g0063 a0001c0004t0009g0003 a0001c0004t0009g0011 a0001c0013t0009g0339 a0002c0005t0002g0012	6	358	0.0168	9	c.67+ others(24): Show c.67+2611_67+2619dupATTATTATT	LDLR	ENSG00000130164.15	transcript	ENST00000558518.6	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr19	TogoVar
LDLR_chr19_11084463_11138820	11101470	C C	CTTTTTTT others(2): Show CTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG01109.hp1 HG01261.hp1 others(9): Show HG00642.hp1 HG01109.hp1 HG01261.hp1 HG01975.hp2 HG02083.hp2 HG02698.hp1 HG02738.hp1 HG02965.hp1 HG03540.hp1 HG03669.hp2 HG03704.hp1 NA18940.hp1	a0001 a0001	a0001c0002 a0001c0006 a0001c0009 others(3): Show a0001c0002 a0001c0006 a0001c0009 a0001c0010 a0001c0013 a0001c0027	a0001c0002t0006 a0001c0006t0006 a0001c0009t0001 others(6): Show a0001c0002t0006 a0001c0006t0006 a0001c0009t0001 a0001c0009t0017 a0001c0009t0040 a0001c0010t0005 a0001c0010t0010 a0001c0013t0004 a0001c0027t0008	a0001c0002t0006g0043 a0001c0006t0006g0331 a0001c0006t0006g0332 others(8): Show a0001c0002t0006g0043 a0001c0006t0006g0331 a0001c0006t0006g0332 a0001c0009t0001g0017 a0001c0009t0017g0004 a0001c0009t0017g0268 a0001c0009t0040g0027 a0001c0010t0005g0023 a0001c0010t0010g0024 a0001c0013t0004g0041 a0001c0027t0008g0348	12	358	0.0335	9	c.190 others(26): Show c.190+1133_190+1141dupTTTTTTTTT	LDLR	ENSG00000130164.15	transcript	ENST00000558518.6	protein_coding	2/17		INFO_REALIGN_3_PRIME	chr19	TogoVar
LDLR_chr19_11084463_11138820	11134033	A A	ATTTTTTT others(2): Show ATTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01074.hp2 HG01167.hp1 HG01257.hp2 others(12): Show HG01074.hp2 HG01167.hp1 HG01257.hp2 HG01496.hp1 HG01516.hp1 HG01981.hp2 HG02451.hp1 HG02970.hp1 HG03139.hp2 HG03579.hp1 HG03669.hp1 HG03834.hp1 HG03942.hp2 NA18906.hp2 NA20805.hp2	a0001 a0001	a0001c0007 a0001c0008 a0001c0018 a0001c0007 a0001c0008 a0001c0018	a0001c0007t0020 a0001c0008t0008 a0001c0008t0047 others(1): Show a0001c0007t0020 a0001c0008t0008 a0001c0008t0047 a0001c0018t0024	a0001c0007t0020g0318 a0001c0008t0008g0002 a0001c0008t0008g0013 others(10): Show a0001c0007t0020g0318 a0001c0008t0008g0002 a0001c0008t0008g0013 a0001c0008t0008g0029 a0001c0008t0008g0065 a0001c0008t0008g0174 a0001c0008t0008g0175 a0001c0008t0008g0183 a0001c0008t0008g0194 a0001c0008t0008g0214 a0001c0008t0008g0296 a0001c0008t0047g0190 a0001c0018t0024g0047	15	358	0.0419	9	c.27 others(20): Show c.2717_*2718insTTTTTTTTT	LDLR	ENSG00000130164.15	transcript	ENST00000558518.6	protein_coding		214		chr19	TogoVar
LEF1_chr4_108042548_108173932	108098502	A A	AAGGGGGG others(2): Show AAGGGGGGGC	intron_variant intron_variant	MODIFIER	HG01069.hp1 HG03490.hp1 HG03491.hp1 others(4): Show HG01069.hp1 HG03490.hp1 HG03491.hp1 HG03492.hp2 HG03654.hp2 HG04115.hp1 HG04199.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0004 a0001c0001t0002 a0001c0001t0004	a0001c0001t0002g0057 a0001c0001t0002g0079 a0001c0001t0002g0081 others(4): Show a0001c0001t0002g0057 a0001c0001t0002g0079 a0001c0001t0002g0081 a0001c0001t0002g0092 a0001c0001t0004g0028 a0001c0001t0004g0054 a0001c0001t0004g0055	7	264	0.0265	9	c.415 others(26): Show c.415-9254_415-9246dupGCCCCCCCT	LEF1	ENSG00000138795.10	transcript	ENST00000265165.6	protein_coding	3/11			chr4	TogoVar
LEKR1_chr3_156821353_157051129	157017948	C C	CAAAAAAA others(2): Show CAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG02572.hp1 HG02809.hp1 others(6): Show HG00423.hp2 HG02572.hp1 HG02809.hp1 HG02976.hp2 NA18974.hp1 NA18975.hp2 NA18988.hp2 NA19000.hp1 NA19007.hp2	a0001 a0001	a0001c0003 a0001c0010 a0001c0003 a0001c0010	a0001c0003t0001 a0001c0010t0001 a0001c0003t0001 a0001c0010t0001	a0001c0003t0001g0136 a0001c0003t0001g0151 a0001c0003t0001g0164 others(6): Show a0001c0003t0001g0136 a0001c0003t0001g0151 a0001c0003t0001g0164 a0001c0003t0001g0198 a0001c0003t0001g0202 a0001c0003t0001g0209 a0001c0003t0001g0211 a0001c0003t0001g0223 a0001c0010t0001g0195	9	244	0.0369	9	c.120 others(28): Show c.1203+6458_1203+6466dupAAAAAAAAA	LEKR1	ENSG00000197980.14	transcript	ENST00000356539.9	protein_coding	10/12		INFO_REALIGN_3_PRIME	chr3	TogoVar
LEO1_chr15_51933025_51976778	51945262	C C	CAAAAAAA others(2): Show CAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG02559.hp1 HG04204.hp1 others(3): Show HG02145.hp1 HG02559.hp1 HG04204.hp1 NA18979.hp2 NA19012.hp2 NA19064.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0099 a0001c0001t0001g0144 a0001c0002t0001g0288 others(3): Show a0001c0001t0001g0099 a0001c0001t0001g0144 a0001c0002t0001g0288 a0001c0002t0001g0296 a0001c0002t0001g0301 a0001c0002t0001g0305	6	388	0.0155	9	c.189 others(28): Show c.1896+2021_1896+2029dupTTTTTTTTT	LEO1	ENSG00000166477.13	transcript	ENST00000299601.10	protein_coding	11/11			chr15	TogoVar
LEPROTL1_chr8_30090408_30113524	30112401	A A	ATTTTTTT others(2): Show ATTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp1 HG00642.hp1 HG00735.hp2 others(20): Show HG00099.hp1 HG00642.hp1 HG00735.hp2 HG01099.hp2 HG01167.hp1 HG01516.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG02145.hp2 HG02738.hp2 HG03017.hp2 HG03831.hp1 HG03834.hp2 NA18944.hp2 NA18953.hp2 NA18973.hp1 NA18989.hp2 NA18999.hp1 NA19002.hp2 NA19011.hp1 NA19079.hp1 NA19079.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0001 a0001c0001t0002 a0001c0001t0003	a0001c0001t0001g0001 a0001c0001t0001g0023 a0001c0001t0001g0042 others(11): Show a0001c0001t0001g0001 a0001c0001t0001g0023 a0001c0001t0001g0042 a0001c0001t0001g0047 a0001c0001t0001g0128 a0001c0001t0001g0131 a0001c0001t0001g0133 a0001c0001t0001g0139 a0001c0001t0001g0140 a0001c0001t0001g0142 a0001c0001t0001g0192 a0001c0001t0002g0030 a0001c0001t0003g0006 a0001c0001t0003g0044	23	416	0.0553	9	c.65 others(20): Show c.6539_*6540insTTTTTTTTT	LEPROTL1	ENSG00000104660.19	transcript	ENST00000321250.13	protein_coding		3878		chr8	TogoVar
LEPR_chr1_65415668_65646559	65488137	C C	CTCCTTCC others(2): Show CTCCTTCCTT	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG03139.hp1 HG02258.hp1 HG03139.hp1	a0003 a0005 a0003 a0005	a0003c0011 a0005c0007 a0003c0011 a0005c0007	a0003c0011t0019 a0005c0007t0002 a0003c0011t0019 a0005c0007t0002	a0003c0011t0019g0180 a0005c0007t0002g0127 a0003c0011t0019g0180 a0005c0007t0002g0127	2	216	0.0093	9	c.-21 others(28): Show c.-21+62759_-21+62760insTCCTTCCTT	LEPR	ENSG00000116678.20	transcript	ENST00000349533.11	protein_coding	2/19			chr1	TogoVar
LEPR_chr1_65415668_65646559	65503475	G G	GAAAAATA others(2): Show GAAAAATAAT	intron_variant intron_variant	MODIFIER	HG01255.hp1 HG02622.hp2 HG02647.hp1 others(2): Show HG01255.hp1 HG02622.hp2 HG02647.hp1 HG02922.hp1 HG02976.hp2	a0003 a0006 a0010 a0003 a0006 a0010	a0003c0006 a0003c0014 a0006c0013 others(1): Show a0003c0006 a0003c0014 a0006c0013 a0010c0019	a0003c0006t0021 a0003c0014t0047 a0006c0013t0017 others(2): Show a0003c0006t0021 a0003c0014t0047 a0006c0013t0017 a0006c0013t0022 a0010c0019t0017	a0003c0006t0021g0079 a0003c0014t0047g0190 a0006c0013t0017g0208 others(2): Show a0003c0006t0021g0079 a0003c0014t0047g0190 a0006c0013t0017g0208 a0006c0013t0022g0096 a0010c0019t0017g0126	5	216	0.0232	9	c.-20 others(28): Show c.-20-62070_-20-62062dupAAAAATAAT	LEPR	ENSG00000116678.20	transcript	ENST00000349533.11	protein_coding	2/19		INFO_REALIGN_3_PRIME	chr1	TogoVar
LEP_chr7_128236278_128262629	128258439	C C	CAAAAAAA others(2): Show CAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00323.hp2 HG00438.hp2 HG00558.hp1 others(33): Show HG00323.hp2 HG00438.hp2 HG00558.hp1 HG01069.hp2 HG01071.hp1 HG01099.hp1 HG01106.hp1 HG01192.hp1 HG01496.hp2 HG01891.hp1 HG01943.hp1 HG01978.hp1 HG02040.hp1 HG02055.hp2 HG02615.hp1 HG02630.hp1 HG02630.hp2 HG02683.hp1 HG02723.hp1 HG02735.hp2 HG02818.hp1 HG02886.hp2 HG02896.hp1 HG02897.hp2 HG03225.hp1 HG03239.hp2 HG03453.hp1 HG03471.hp2 HG03490.hp1 HG03516.hp2 HG03579.hp1 HG03579.hp2 HG04228.hp2 NA18950.hp2 NA19030.hp2 NA20752.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0003 a0001c0001t0007 a0001c0001t0022 others(8): Show a0001c0001t0003 a0001c0001t0007 a0001c0001t0022 a0001c0001t0024 a0001c0001t0026 a0001c0001t0028 a0001c0001t0035 a0001c0001t0045 a0001c0001t0051 a0001c0001t0057 a0002c0003t0016	a0001c0001t0003g0001 a0001c0001t0003g0013 a0001c0001t0003g0019 others(20): Show a0001c0001t0003g0001 a0001c0001t0003g0013 a0001c0001t0003g0019 a0001c0001t0003g0026 a0001c0001t0003g0027 a0001c0001t0003g0036 a0001c0001t0003g0044 a0001c0001t0003g0045 a0001c0001t0003g0092 a0001c0001t0003g0118 a0001c0001t0003g0128 a0001c0001t0003g0133 a0001c0001t0007g0012 a0001c0001t0022g0039 a0001c0001t0024g0022 a0001c0001t0026g0121 a0001c0001t0028g0087 a0001c0001t0028g0089 a0001c0001t0035g0022 a0001c0001t0045g0129 a0001c0001t0051g0078 a0001c0001t0057g0120 a0002c0003t0016g0016	36	395	0.0911	9	c.36 others(20): Show c.3676_*3677insAAAAAAAAA	LEP	ENSG00000174697.5	transcript	ENST00000308868.5	protein_coding		811		chr7	TogoVar
LEUTX_chr19_39773854_39791291	39781043	T T	TTTCCTCC others(2): Show TTTCCTCCTC	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG02055.hp1 HG02257.hp1 others(25): Show HG01109.hp1 HG02055.hp1 HG02257.hp1 HG02451.hp2 HG02486.hp1 HG02615.hp1 HG02622.hp1 HG02622.hp2 HG02630.hp2 HG02647.hp1 HG02895.hp1 HG02895.hp2 HG02897.hp1 HG02965.hp1 HG03130.hp2 HG03209.hp1 HG03225.hp1 HG03471.hp2 HG03516.hp2 HG03579.hp1 HG06807.hp1 NA18522.hp1 NA18906.hp1 NA19043.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0010 a0001c0001t0002g0018 a0001c0001t0002g0019 others(8): Show a0001c0001t0002g0010 a0001c0001t0002g0018 a0001c0001t0002g0019 a0001c0001t0002g0026 a0001c0001t0002g0027 a0001c0001t0002g0028 a0001c0001t0002g0048 a0001c0001t0002g0049 a0001c0001t0002g0051 a0001c0001t0002g0105 a0001c0001t0002g0106	28	476	0.0588	9	c.7+2 others(22): Show c.7+2120_7+2128dupCTCCTCTTC	LEUTX	ENSG00000213921.8	transcript	ENST00000638280.2	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr19	TogoVar
LFNG_chr7_2514774_2533429	2533376	A A	ATATTTTT others(2): Show ATATTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00621.hp2 HG01258.hp2 HG02004.hp1 others(20): Show HG00621.hp2 HG01258.hp2 HG02004.hp1 HG02040.hp1 HG02132.hp2 HG02698.hp1 HG03195.hp2 HG03834.hp1 HG03927.hp2 NA18964.hp1 NA18966.hp1 NA18980.hp1 NA18981.hp1 NA18983.hp2 NA18984.hp1 NA18985.hp2 NA19009.hp2 NA19012.hp1 NA19059.hp2 NA19067.hp1 NA19079.hp1 NA19083.hp1 NA19087.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0001c0002 a0004c0008 a0001c0001 a0001c0002 a0004c0008	a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 a0001c0002t0011 a0004c0008t0001	a0001c0001t0001g0001 a0001c0001t0001g0063 a0001c0001t0002g0001 others(10): Show a0001c0001t0001g0001 a0001c0001t0001g0063 a0001c0001t0002g0001 a0001c0002t0001g0001 a0001c0002t0001g0007 a0001c0002t0001g0012 a0001c0002t0001g0019 a0001c0002t0001g0025 a0001c0002t0001g0040 a0001c0002t0001g0043 a0001c0002t0001g0100 a0001c0002t0011g0064 a0004c0008t0001g0001	23	414	0.0556	9	c.61 others(20): Show c.6164_*6165insTATTTTTTT	LFNG	ENSG00000106003.14	transcript	ENST00000222725.10	protein_coding		4948		chr7	TogoVar
LGALS13_chr19_39597524_39612474	39609022	C C	CAAAAAAA others(2): Show CAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02109.hp1 HG03195.hp1 HG03579.hp2 others(3): Show HG02109.hp1 HG03195.hp1 HG03579.hp2 HG03710.hp2 HG04115.hp2 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0007 a0001c0001t0001g0007	6	446	0.0135	9	c.16 others(20): Show c.1683_*1684insAAAAAAAAA	LGALS13	ENSG00000105198.12	transcript	ENST00000221797.5	protein_coding		1549		chr19	TogoVar
LGALS1_chr22_37670636_37684802	37671950	C C	CTTTTTTT others(2): Show CTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00408.hp1 HG00438.hp1 HG00597.hp1 others(77): Show HG00408.hp1 HG00438.hp1 HG00597.hp1 HG00609.hp1 HG00673.hp1 HG01109.hp1 HG01109.hp2 HG01257.hp1 HG01884.hp1 HG01884.hp2 HG01934.hp1 HG01952.hp2 HG02055.hp2 HG02074.hp1 HG02074.hp2 HG02129.hp2 HG02145.hp1 HG02280.hp2 HG02300.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp2 HG02647.hp1 HG02723.hp1 HG02723.hp2 HG02809.hp2 HG02818.hp2 HG02896.hp2 HG02897.hp1 HG02922.hp1 HG02965.hp1 HG03130.hp1 HG03130.hp2 HG03453.hp2 HG03486.hp1 HG03516.hp1 HG03704.hp2 HG03710.hp2 HG03831.hp1 HG04184.hp1 NA18747.hp2 NA18943.hp2 NA18947.hp1 NA18947.hp2 NA18948.hp2 NA18951.hp1 NA18952.hp1 NA18954.hp2 NA18957.hp1 NA18963.hp2 NA18964.hp1 NA18966.hp1 NA18969.hp2 NA18971.hp1 NA18971.hp2 NA18974.hp1 NA18978.hp2 NA18979.hp1 NA18979.hp2 NA18983.hp1 NA18988.hp1 NA18990.hp1 NA18995.hp1 NA18998.hp1 NA19004.hp2 NA19009.hp1 NA19010.hp2 NA19012.hp1 NA19057.hp1 NA19059.hp1 NA19060.hp1 NA19062.hp1 NA19063.hp1 NA19068.hp1 NA19084.hp1 NA19085.hp1 NA19089.hp2 NA19091.hp2 NA19240.hp1 NA21309.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0001 a0001c0001t0002 a0002c0003t0001 a0001c0001t0001 a0001c0001t0002 a0002c0003t0001	a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0008 others(16): Show a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0008 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0018 a0001c0001t0001g0020 a0001c0001t0001g0027 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0040 a0001c0001t0001g0054 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0061 a0001c0001t0002g0006 a0002c0003t0001g0059	80	420	0.1905	9	c.-37 others(20): Show c.-3753_-3752insTTTTTTTTT	LGALS1	ENSG00000100097.12	transcript	ENST00000215909.10	protein_coding		3685		chr22	TogoVar
LGALS2_chr22_37565248_37585087	37572769	A A	AAATAATA others(2): Show AAATAATAAT	intron_variant intron_variant	MODIFIER	HG00609.hp1 HG00609.hp2 HG01109.hp2 others(13): Show HG00609.hp1 HG00609.hp2 HG01109.hp2 HG01891.hp1 HG02056.hp1 HG02080.hp2 HG02647.hp1 HG03834.hp1 NA18612.hp2 NA18993.hp1 NA18993.hp2 NA18999.hp2 NA19001.hp2 NA19007.hp1 NA19054.hp2 NA19077.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0001 a0001c0001t0001 a0002c0002t0001	a0001c0001t0001g0098 a0001c0001t0001g0108 a0001c0001t0001g0110 others(11): Show a0001c0001t0001g0098 a0001c0001t0001g0108 a0001c0001t0001g0110 a0001c0001t0001g0112 a0001c0001t0001g0114 a0001c0001t0001g0116 a0001c0001t0001g0123 a0001c0001t0001g0125 a0001c0001t0001g0128 a0001c0001t0001g0136 a0001c0001t0001g0211 a0001c0001t0001g0216 a0002c0002t0001g0045 a0002c0002t0001g0053	16	460	0.0348	9	c.7-8 others(20): Show c.7-847_7-839dupATTATTATT	LGALS2	ENSG00000100079.7	transcript	ENST00000215886.6	protein_coding	1/3			chr22	TogoVar
LGALS9_chr17_27626188_27654560	27650632	A A	AAACAACA others(2): Show AAACAACAAC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02622.hp1 HG02723.hp2 HG02886.hp2 others(1): Show HG02622.hp1 HG02723.hp2 HG02886.hp2 HG03225.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0045 a0001c0001t0001g0110 a0001c0001t0001g0129 a0001c0001t0001g0045 a0001c0001t0001g0110 a0001c0001t0001g0129	4	446	0.0090	9	c.16 others(20): Show c.1650_*1651insAACAACAAC	LGALS9	ENSG00000168961.17	transcript	ENST00000395473.7	protein_coding		1073		chr17	TogoVar
LGI3_chr8_22141830_22161806	22156845	G G	GGAGGCCC others(2): Show GGAGGCCCGA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00140.hp1 HG00280.hp1 HG01123.hp2 others(41): Show HG00140.hp1 HG00280.hp1 HG01123.hp2 HG01256.hp2 HG01258.hp1 HG01358.hp2 HG01928.hp2 HG01943.hp2 HG01978.hp1 HG01981.hp2 HG01993.hp1 HG02004.hp1 HG02027.hp2 HG02132.hp1 HG02145.hp2 HG02148.hp2 HG02293.hp2 HG02451.hp2 HG02486.hp2 HG02602.hp1 HG02622.hp2 HG02698.hp2 HG02723.hp1 HG02723.hp2 HG02809.hp2 HG02818.hp2 HG02886.hp1 HG02965.hp2 HG02970.hp2 HG02976.hp2 HG03098.hp1 HG03453.hp2 HG03490.hp1 HG03492.hp1 HG03654.hp2 HG03669.hp1 HG03704.hp1 HG03927.hp1 HG04184.hp2 HG04199.hp2 HG04204.hp1 NA18906.hp1 NA19043.hp2 NA21309.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0008 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0008 a0001c0001t0010 a0001c0001t0027 a0001c0001t0028 a0002c0002t0007	a0001c0001t0001g0006 a0001c0001t0002g0004 a0001c0001t0002g0013 others(17): Show a0001c0001t0001g0006 a0001c0001t0002g0004 a0001c0001t0002g0013 a0001c0001t0002g0025 a0001c0001t0002g0047 a0001c0001t0002g0131 a0001c0001t0002g0143 a0001c0001t0002g0144 a0001c0001t0002g0146 a0001c0001t0002g0148 a0001c0001t0008g0020 a0001c0001t0010g0044 a0001c0001t0010g0139 a0001c0001t0010g0140 a0001c0001t0010g0145 a0001c0001t0027g0133 a0001c0001t0028g0130 a0002c0002t0007g0040 a0002c0002t0007g0041 a0002c0002t0007g0042	44	408	0.1078	9	c.-30 others(18): Show c.-304_-303insTCGGGCCTC	LGI3	ENSG00000168481.9	transcript	ENST00000306317.7	protein_coding		40		chr8	TogoVar
LGMN_chr14_92698809_92753627	92708856	C C	CAAAAAAA others(2): Show CAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00621.hp1 HG00738.hp1 HG01099.hp1 others(21): Show HG00621.hp1 HG00738.hp1 HG01099.hp1 HG01358.hp2 HG01496.hp2 HG02615.hp1 HG02615.hp2 HG02723.hp1 HG02809.hp2 HG02922.hp1 HG03017.hp1 HG03471.hp1 HG03579.hp2 NA18948.hp2 NA18951.hp1 NA18960.hp2 NA18962.hp2 NA18964.hp1 NA18981.hp2 NA19057.hp1 NA19070.hp1 NA19080.hp2 NA19086.hp2 NA21309.hp1	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0001c0002 a0001c0014 others(4): Show a0001c0001 a0001c0002 a0001c0014 a0002c0003 a0002c0005 a0002c0015 a0004c0013	a0001c0001t0001 a0001c0002t0001 a0001c0014t0001 others(4): Show a0001c0001t0001 a0001c0002t0001 a0001c0014t0001 a0002c0003t0004 a0002c0005t0001 a0002c0015t0003 a0004c0013t0001	a0001c0001t0001g0140 a0001c0001t0001g0150 a0001c0001t0001g0206 others(21): Show a0001c0001t0001g0140 a0001c0001t0001g0150 a0001c0001t0001g0206 a0001c0001t0001g0238 a0001c0001t0001g0248 a0001c0001t0001g0264 a0001c0001t0001g0335 a0001c0001t0001g0339 a0001c0001t0001g0375 a0001c0001t0001g0389 a0001c0001t0001g0407 a0001c0001t0001g0411 a0001c0002t0001g0056 a0001c0002t0001g0092 a0001c0002t0001g0094 a0001c0002t0001g0180 a0001c0002t0001g0239 a0001c0014t0001g0026 a0001c0014t0001g0043 a0002c0003t0004g0144 a0002c0005t0001g0110 a0002c0015t0003g0033 a0004c0013t0001g0160 a0004c0013t0001g0386	24	420	0.0571	9	c.102 others(26): Show c.1020+807_1020+815dupTTTTTTTTT	LGMN	ENSG00000100600.15	transcript	ENST00000334869.9	protein_coding	11/13			chr14	TogoVar
LGMN_chr14_92698809_92753627	92719332	A A	ACCACCGC others(2): Show ACCACCGCCG	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00423.hp1 HG00438.hp2 others(14): Show HG00408.hp1 HG00423.hp1 HG00438.hp2 HG01081.hp1 HG02074.hp1 HG02132.hp2 HG02165.hp1 HG02273.hp2 HG03540.hp2 NA18942.hp2 NA18971.hp1 NA18973.hp2 NA18983.hp2 NA18989.hp2 NA19077.hp2 NA19085.hp2 NA20300.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0004 a0002c0005 others(1): Show a0001c0001 a0001c0004 a0002c0005 a0003c0007	a0001c0001t0001 a0001c0004t0001 a0002c0005t0001 others(1): Show a0001c0001t0001 a0001c0004t0001 a0002c0005t0001 a0003c0007t0001	a0001c0001t0001g0155 a0001c0004t0001g0017 a0001c0004t0001g0082 others(14): Show a0001c0001t0001g0155 a0001c0004t0001g0017 a0001c0004t0001g0082 a0001c0004t0001g0156 a0001c0004t0001g0170 a0001c0004t0001g0171 a0001c0004t0001g0216 a0001c0004t0001g0250 a0001c0004t0001g0288 a0001c0004t0001g0304 a0001c0004t0001g0342 a0001c0004t0001g0361 a0001c0004t0001g0383 a0002c0005t0001g0328 a0003c0007t0001g0176 a0003c0007t0001g0178 a0003c0007t0001g0179	17	420	0.0405	9	c.139 others(24): Show c.139-489_139-488insCGGCGGTGG	LGMN	ENSG00000100600.15	transcript	ENST00000334869.9	protein_coding	2/13			chr14	TogoVar
LGR4_chr11_27360961_27477790	27428636	C C	CTAGATAG others(2): Show CTAGATAGAT	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG01243.hp1 HG01257.hp1 others(1): Show HG01109.hp2 HG01243.hp1 HG01257.hp1 HG03471.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0004c0007 a0001c0001 a0004c0007	a0001c0001t0001 a0004c0007t0001 a0001c0001t0001 a0004c0007t0001	a0001c0001t0001g0114 a0001c0001t0001g0115 a0004c0007t0001g0096 others(1): Show a0001c0001t0001g0114 a0001c0001t0001g0115 a0004c0007t0001g0096 a0004c0007t0001g0116	4	244	0.0164	9	c.186 others(28): Show c.186-15777_186-15776insATCTATCTA	LGR4	ENSG00000205213.14	transcript	ENST00000379214.9	protein_coding	1/17			chr11	TogoVar
LGR5_chr12_71434798_71591310	71589579	A A	AAACCCAA others(2): Show AAACCCAAGT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00741.hp1 HG01175.hp1 HG01496.hp2 others(3): Show HG00741.hp1 HG01175.hp1 HG01496.hp2 HG02132.hp2 HG02135.hp2 NA20905.hp1	a0001 a0002 a0001 a0002	a0001c0016 a0002c0003 a0001c0016 a0002c0003	a0001c0016t0015 a0002c0003t0001 a0002c0003t0002 a0001c0016t0015 a0002c0003t0001 a0002c0003t0002	a0001c0016t0015g0056 a0002c0003t0001g0020 a0002c0003t0001g0125 others(3): Show a0001c0016t0015g0056 a0002c0003t0001g0020 a0002c0003t0001g0125 a0002c0003t0002g0082 a0002c0003t0002g0085 a0002c0003t0002g0093	6	200	0.0300	9	c.48 others(20): Show c.4845_*4846insAACCCAAGT	LGR5	ENSG00000139292.13	transcript	ENST00000266674.10	protein_coding		3270		chr12	TogoVar
LGR6_chr1_202188799_202324761	202215109	A A	AGTGAGGG others(2): Show AGTGAGGGTG	intron_variant intron_variant	MODIFIER	HG00673.hp1 HG00735.hp2 HG01099.hp2 others(20): Show HG00673.hp1 HG00735.hp2 HG01099.hp2 HG01243.hp1 HG01257.hp2 HG01891.hp1 HG01993.hp1 HG02074.hp1 HG02135.hp1 HG02148.hp1 HG02273.hp2 HG02293.hp2 HG02615.hp2 HG02809.hp2 HG02970.hp1 HG03239.hp2 HG03516.hp1 HG03516.hp2 HG03654.hp1 HG03688.hp1 NA18971.hp2 NA19043.hp1 NA19088.hp1	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0004 a0006 a0015	a0001c0001 a0002c0002 a0003c0004 others(4): Show a0001c0001 a0002c0002 a0003c0004 a0003c0026 a0004c0035 a0006c0009 a0015c0015	a0001c0001t0001 a0001c0001t0004 a0002c0002t0003 others(5): Show a0001c0001t0001 a0001c0001t0004 a0002c0002t0003 a0003c0004t0001 a0003c0026t0004 a0004c0035t0003 a0006c0009t0004 a0015c0015t0002	a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0005 others(20): Show a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0174 a0001c0001t0001g0249 a0001c0001t0001g0252 a0001c0001t0004g0095 a0002c0002t0003g0044 a0002c0002t0003g0091 a0003c0004t0001g0221 a0003c0004t0001g0222 a0003c0026t0004g0099 a0004c0035t0003g0096 a0006c0009t0004g0018 a0006c0009t0004g0019 a0015c0015t0002g0202	23	262	0.0878	9	c.213 others(28): Show c.213-10310_213-10302dupAGGGTGGTG	LGR6	ENSG00000133067.18	transcript	ENST00000367278.8	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr1	TogoVar
LHFPL1_chrX_112625648_112684938	112660789	T T	TTTGGATT others(2): Show TTTGGATTAG	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02622.hp1 HG02818.hp2 others(3): Show HG01884.hp2 HG02622.hp1 HG02818.hp2 HG02970.hp2 HG03195.hp2 HG03486.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0005 a0001c0002t0001 a0001c0002t0005	a0001c0002t0001g0026 a0001c0002t0001g0181 a0001c0002t0005g0027 others(1): Show a0001c0002t0001g0026 a0001c0002t0001g0181 a0001c0002t0005g0027 a0001c0002t0005g0180	6	245	0.0245	9	c.383 others(22): Show c.383-73_383-65dupCTAATCCAA	LHFPL1	ENSG00000182508.14	transcript	ENST00000371968.8	protein_coding	2/3			chrX	TogoVar
LHFPL2_chr5_78480230_78653772	78590201	G G	GAACAACA others(2): Show GAACAACAAC	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00280.hp1 HG00323.hp2 others(64): Show HG00099.hp1 HG00280.hp1 HG00323.hp2 HG00408.hp1 HG00438.hp2 HG00609.hp2 HG00639.hp1 HG00642.hp2 HG00735.hp2 HG00738.hp1 HG01070.hp1 HG01071.hp1 HG01074.hp2 HG01081.hp1 HG01099.hp2 HG01167.hp2 HG01168.hp1 HG01169.hp1 HG01175.hp1 HG01255.hp2 HG01258.hp1 HG01261.hp2 HG01358.hp1 HG01496.hp2 HG01516.hp2 HG01934.hp1 HG02004.hp1 HG02056.hp1 HG02071.hp1 HG02074.hp1 HG02083.hp1 HG02135.hp1 HG02145.hp1 HG02148.hp2 HG02258.hp1 HG02451.hp1 HG02486.hp1 HG02486.hp2 HG02572.hp1 HG02735.hp2 HG02897.hp1 HG03486.hp1 HG03491.hp2 HG03540.hp1 HG03654.hp1 HG06807.hp1 NA18941.hp1 NA18955.hp2 NA18957.hp1 NA18962.hp1 NA18977.hp1 NA18986.hp1 NA18993.hp1 NA18994.hp1 NA19002.hp2 NA19010.hp1 NA19011.hp1 NA19057.hp2 NA19058.hp2 NA19060.hp1 NA19064.hp1 NA19068.hp2 NA19070.hp2 NA19079.hp1 NA19088.hp2 NA19091.hp1 NA20805.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 others(10): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0010 a0001c0001t0012 a0001c0001t0013 a0001c0001t0025 a0001c0001t0028 a0001c0001t0034 a0001c0002t0002 a0001c0002t0003	a0001c0001t0001g0004 a0001c0001t0001g0010 a0001c0001t0001g0017 others(64): Show a0001c0001t0001g0004 a0001c0001t0001g0010 a0001c0001t0001g0017 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0040 a0001c0001t0001g0050 a0001c0001t0001g0051 a0001c0001t0001g0061 a0001c0001t0001g0067 a0001c0001t0001g0076 a0001c0001t0001g0078 a0001c0001t0001g0109 a0001c0001t0001g0117 a0001c0001t0001g0118 a0001c0001t0001g0119 a0001c0001t0001g0131 a0001c0001t0001g0141 a0001c0001t0001g0143 a0001c0001t0001g0147 a0001c0001t0001g0167 a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0215 a0001c0001t0001g0217 a0001c0001t0001g0237 a0001c0001t0004g0008 a0001c0001t0004g0009 a0001c0001t0004g0031 a0001c0001t0004g0034 a0001c0001t0004g0035 a0001c0001t0004g0036 a0001c0001t0004g0038 a0001c0001t0004g0052 a0001c0001t0004g0099 a0001c0001t0004g0207 a0001c0001t0004g0236 a0001c0001t0005g0059 a0001c0001t0005g0068 a0001c0001t0005g0069 a0001c0001t0005g0093 a0001c0001t0005g0115 a0001c0001t0005g0171 a0001c0001t0005g0179 a0001c0001t0005g0186 a0001c0001t0005g0238 a0001c0001t0005g0239 a0001c0001t0006g0220 a0001c0001t0007g0241 a0001c0001t0010g0033 a0001c0001t0010g0065 a0001c0001t0010g0066 a0001c0001t0010g0156 a0001c0001t0010g0192 a0001c0001t0010g0209 a0001c0001t0010g0216 a0001c0001t0012g0013 a0001c0001t0012g0014 a0001c0001t0013g0060 a0001c0001t0013g0125 a0001c0001t0025g0169 a0001c0001t0028g0235 a0001c0001t0034g0154 a0001c0002t0002g0006 a0001c0002t0002g0142 a0001c0002t0003g0144 a0001c0002t0003g0191	67	254	0.2638	9	c.-24 others(30): Show c.-244-25339_-244-25331dupGTTGTTGTT	LHFPL2	ENSG00000145685.14	transcript	ENST00000380345.7	protein_coding	2/4			chr5	TogoVar
LHFPL3_chr7_104323603_104913561	104357757	T T	TTCCTCCT others(2): Show TTCCTCCTCC	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG02056.hp1 HG03239.hp2 others(3): Show HG00558.hp1 HG02056.hp1 HG03239.hp2 NA18947.hp1 NA19063.hp2 NA19085.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004	a0001c0001t0002g0026 a0001c0001t0003g0025 a0001c0001t0003g0029 others(3): Show a0001c0001t0002g0026 a0001c0001t0003g0025 a0001c0001t0003g0029 a0001c0001t0004g0027 a0001c0001t0004g0028 a0001c0001t0004g0030	6	86	0.0698	9	c.445 others(28): Show c.445+28544_445+28552dupCCTCCTCCT	LHFPL3	ENSG00000187416.13	transcript	ENST00000424859.7	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr7	TogoVar
LHFPL3_chr7_104323603_104913561	104372997	C C	CAAAAAAA others(2): Show CAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00621.hp1 HG00621.hp2 HG01074.hp2 others(12): Show HG00621.hp1 HG00621.hp2 HG01074.hp2 HG01123.hp1 HG01192.hp1 HG01517.hp1 HG02056.hp2 HG02257.hp1 HG02451.hp2 HG02572.hp2 HG02965.hp1 NA18612.hp2 NA18972.hp1 NA18972.hp2 NA18986.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(7): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0002t0010 a0001c0003t0002	a0001c0001t0001g0038 a0001c0001t0001g0071 a0001c0001t0002g0034 others(12): Show a0001c0001t0001g0038 a0001c0001t0001g0071 a0001c0001t0002g0034 a0001c0001t0003g0024 a0001c0001t0004g0033 a0001c0001t0004g0079 a0001c0001t0005g0005 a0001c0001t0006g0006 a0001c0001t0006g0013 a0001c0001t0006g0014 a0001c0001t0007g0016 a0001c0001t0007g0066 a0001c0001t0008g0012 a0001c0002t0010g0017 a0001c0003t0002g0065	15	86	0.1744	9	c.445 others(28): Show c.445+43776_445+43784dupAAAAAAAAA	LHFPL3	ENSG00000187416.13	transcript	ENST00000424859.7	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr7	TogoVar
LHFPL3_chr7_104323603_104913561	104408864	C C	CTTTTTTT others(2): Show CTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01070.hp2 HG02280.hp1 HG02293.hp1 others(2): Show HG01070.hp2 HG02280.hp1 HG02293.hp1 HG03209.hp1 HG03239.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 others(2): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 a0001c0001t0007 a0001c0001t0009	a0001c0001t0001g0043 a0001c0001t0003g0003 a0001c0001t0005g0031 others(2): Show a0001c0001t0001g0043 a0001c0001t0003g0003 a0001c0001t0005g0031 a0001c0001t0007g0032 a0001c0001t0009g0076	5	86	0.0581	9	c.445 others(28): Show c.445+79650_445+79658dupTTTTTTTTT	LHFPL3	ENSG00000187416.13	transcript	ENST00000424859.7	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr7	TogoVar
LHFPL3_chr7_104323603_104913561	104422362	A A	AAACAACA others(2): Show AAACAACAAC	intron_variant intron_variant	MODIFIER	HG00621.hp2 HG00733.hp1 HG01123.hp1 others(11): Show HG00621.hp2 HG00733.hp1 HG01123.hp1 HG01884.hp1 HG02280.hp1 HG02451.hp2 HG02559.hp2 HG02809.hp2 HG02965.hp1 HG03831.hp2 NA18612.hp2 NA18972.hp2 NA19030.hp1 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(6): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0010 a0001c0002t0005 a0001c0002t0010	a0001c0001t0001g0043 a0001c0001t0001g0068 a0001c0001t0002g0034 others(11): Show a0001c0001t0001g0043 a0001c0001t0001g0068 a0001c0001t0002g0034 a0001c0001t0002g0051 a0001c0001t0002g0080 a0001c0001t0005g0005 a0001c0001t0006g0014 a0001c0001t0007g0004 a0001c0001t0007g0066 a0001c0001t0008g0012 a0001c0001t0010g0007 a0001c0001t0010g0015 a0001c0002t0005g0085 a0001c0002t0010g0017	14	86	0.1628	9	c.445 others(28): Show c.445+93150_445+93158dupCAACAACAA	LHFPL3	ENSG00000187416.13	transcript	ENST00000424859.7	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr7	TogoVar
LHFPL3_chr7_104323603_104913561	104424983	T T	TAAAAAAA others(2): Show TAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01070.hp2 HG02293.hp1 HG03239.hp1 others(3): Show HG01070.hp2 HG02293.hp1 HG03239.hp1 NA18986.hp2 NA18994.hp1 NA19063.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0005 a0001c0001t0006 others(2): Show a0001c0001t0003 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008	a0001c0001t0003g0003 a0001c0001t0005g0031 a0001c0001t0006g0018 others(3): Show a0001c0001t0003g0003 a0001c0001t0005g0031 a0001c0001t0006g0018 a0001c0001t0007g0032 a0001c0001t0008g0021 a0001c0001t0008g0023	6	86	0.0698	9	c.445 others(28): Show c.445+95773_445+95781dupAAAAAAAAA	LHFPL3	ENSG00000187416.13	transcript	ENST00000424859.7	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr7	TogoVar
LHFPL3_chr7_104323603_104913561	104614653	C C	CTTCTCTC others(2): Show CTTCTCTCCT	intron_variant intron_variant	MODIFIER	HG00621.hp1 HG01258.hp2 NA19030.hp1 others(1): Show HG00621.hp1 HG01258.hp2 NA19030.hp1 NA19085.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0006 a0001c0001t0008 others(1): Show a0001c0001t0002 a0001c0001t0006 a0001c0001t0008 a0001c0001t0010	a0001c0001t0002g0061 a0001c0001t0006g0013 a0001c0001t0008g0022 others(1): Show a0001c0001t0002g0061 a0001c0001t0006g0013 a0001c0001t0008g0022 a0001c0001t0010g0015	4	86	0.0465	9	c.446 others(30): Show c.446-122021_446-122020insTCTCTCCTT	LHFPL3	ENSG00000187416.13	transcript	ENST00000424859.7	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr7	TogoVar
LHFPL3_chr7_104323603_104913561	104812803	C C	CAAAAAAA others(2): Show CAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00621.hp2 HG01255.hp1 others(1): Show HG00099.hp2 HG00621.hp2 HG01255.hp1 NA19085.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0004 a0001c0001t0002 a0001c0001t0004	a0001c0001t0002g0001 a0001c0001t0002g0034 a0001c0001t0002g0074 others(1): Show a0001c0001t0002g0001 a0001c0001t0002g0034 a0001c0001t0002g0074 a0001c0001t0004g0030	4	86	0.0465	9	c.682 others(28): Show c.682+75912_682+75920dupAAAAAAAAA	LHFPL3	ENSG00000187416.13	transcript	ENST00000424859.7	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr7	TogoVar
LHFPL3_chr7_104323603_104913561	104898006	C C	CTTTTTTT others(2): Show CTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01123.hp2 HG01255.hp1 HG01258.hp2 others(4): Show HG01123.hp2 HG01255.hp1 HG01258.hp2 HG02056.hp1 HG02300.hp1 HG02897.hp1 HG03516.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0001t0003 a0001c0002t0007 a0001c0001t0002 a0001c0001t0003 a0001c0002t0007	a0001c0001t0002g0001 a0001c0001t0002g0026 a0001c0001t0002g0037 others(4): Show a0001c0001t0002g0001 a0001c0001t0002g0026 a0001c0001t0002g0037 a0001c0001t0002g0059 a0001c0001t0002g0061 a0001c0001t0003g0070 a0001c0002t0007g0009	7	86	0.0814	9	c.683 others(26): Show c.683-8168_683-8160dupTTTTTTTTT	LHFPL3	ENSG00000187416.13	transcript	ENST00000424859.7	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr7	TogoVar
LHFPL5_chr6_35800352_35829070	35802880	T T	TAAAAAAA others(2): Show TAAAAAAAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00597.hp2 HG00621.hp2 HG00738.hp2 others(14): Show HG00597.hp2 HG00621.hp2 HG00738.hp2 HG01192.hp2 HG01358.hp2 HG01433.hp2 HG01952.hp1 HG01978.hp1 HG02055.hp2 HG02970.hp1 HG02970.hp2 HG03209.hp2 HG03486.hp1 HG03540.hp2 NA18948.hp1 NA18978.hp2 NA19063.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0010 others(5): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0010 a0001c0001t0012 a0001c0001t0013 a0001c0001t0020 a0001c0001t0044 a0001c0001t0055	a0001c0001t0001g0019 a0001c0001t0003g0214 a0001c0001t0003g0216 others(14): Show a0001c0001t0001g0019 a0001c0001t0003g0214 a0001c0001t0003g0216 a0001c0001t0003g0231 a0001c0001t0003g0232 a0001c0001t0003g0242 a0001c0001t0003g0247 a0001c0001t0003g0249 a0001c0001t0003g0282 a0001c0001t0010g0226 a0001c0001t0010g0364 a0001c0001t0012g0210 a0001c0001t0012g0221 a0001c0001t0013g0275 a0001c0001t0020g0025 a0001c0001t0044g0224 a0001c0001t0055g0265	17	386	0.0440	9	c.-27 others(20): Show c.-2791_-2790insAAAAAAAAA	LHFPL5	ENSG00000197753.11	transcript	ENST00000360215.3	protein_coding		2471		chr6	TogoVar
LHFPL6_chr13_39337892_39608193	39512601	C C	CAAAAAAA others(2): Show CAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG01981.hp1 HG02109.hp2 others(5): Show HG01243.hp2 HG01981.hp1 HG02109.hp2 HG02622.hp2 HG02818.hp2 HG02970.hp1 HG03225.hp2 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0001t0008 a0001c0001t0010 a0001c0002t0009	a0001c0001t0001g0219 a0001c0001t0002g0033 a0001c0001t0002g0227 others(5): Show a0001c0001t0001g0219 a0001c0001t0002g0033 a0001c0001t0002g0227 a0001c0001t0005g0036 a0001c0001t0008g0229 a0001c0001t0010g0031 a0001c0001t0010g0032 a0001c0002t0009g0013	8	242	0.0331	9	c.385 others(28): Show c.385+88222_385+88230dupTTTTTTTTT	LHFPL6	ENSG00000183722.9	transcript	ENST00000379589.4	protein_coding	2/3			chr13	TogoVar
LHFPL6_chr13_39337892_39608193	39542096	T T	TATAATAA others(2): Show TATAATAATA	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00140.hp2 HG00609.hp1 others(48): Show HG00140.hp1 HG00140.hp2 HG00609.hp1 HG00621.hp2 HG00639.hp1 HG00642.hp2 HG00735.hp1 HG01070.hp1 HG01081.hp2 HG01123.hp1 HG01167.hp1 HG01433.hp2 HG01975.hp2 HG02165.hp2 HG02451.hp1 HG02622.hp1 HG02683.hp2 HG02723.hp1 HG02895.hp2 HG02970.hp2 HG03098.hp1 HG03139.hp1 HG03516.hp2 HG03540.hp1 HG04115.hp1 HG04115.hp2 NA18949.hp2 NA18951.hp1 NA18953.hp1 NA18953.hp2 NA18964.hp2 NA18973.hp2 NA18975.hp2 NA18984.hp1 NA18989.hp2 NA18991.hp1 NA18993.hp1 NA18994.hp2 NA19010.hp1 NA19011.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19056.hp1 NA19070.hp2 NA19084.hp1 NA19084.hp2 NA19087.hp2 NA19088.hp1 NA19240.hp1 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(14): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0008 a0001c0001t0009 a0001c0001t0011 a0001c0001t0012 a0001c0001t0013 a0001c0001t0015 a0001c0001t0018 a0001c0001t0024 a0001c0001t0027 a0001c0001t0028 a0001c0003t0003	a0001c0001t0001g0107 a0001c0001t0001g0109 a0001c0001t0001g0138 others(48): Show a0001c0001t0001g0107 a0001c0001t0001g0109 a0001c0001t0001g0138 a0001c0001t0001g0142 a0001c0001t0001g0143 a0001c0001t0001g0146 a0001c0001t0001g0182 a0001c0001t0001g0218 a0001c0001t0001g0222 a0001c0001t0002g0062 a0001c0001t0002g0103 a0001c0001t0002g0135 a0001c0001t0002g0200 a0001c0001t0003g0041 a0001c0001t0003g0053 a0001c0001t0003g0132 a0001c0001t0003g0134 a0001c0001t0003g0157 a0001c0001t0003g0163 a0001c0001t0003g0176 a0001c0001t0003g0181 a0001c0001t0004g0092 a0001c0001t0004g0174 a0001c0001t0004g0183 a0001c0001t0004g0224 a0001c0001t0004g0225 a0001c0001t0005g0063 a0001c0001t0005g0064 a0001c0001t0005g0169 a0001c0001t0006g0125 a0001c0001t0006g0147 a0001c0001t0006g0168 a0001c0001t0008g0108 a0001c0001t0008g0122 a0001c0001t0008g0127 a0001c0001t0008g0204 a0001c0001t0008g0231 a0001c0001t0009g0055 a0001c0001t0009g0156 a0001c0001t0009g0159 a0001c0001t0011g0124 a0001c0001t0011g0223 a0001c0001t0012g0158 a0001c0001t0012g0161 a0001c0001t0013g0167 a0001c0001t0015g0173 a0001c0001t0018g0238 a0001c0001t0024g0150 a0001c0001t0027g0175 a0001c0001t0028g0153 a0001c0003t0003g0133	51	242	0.2107	9	c.385 others(28): Show c.385+58727_385+58735dupTATTATTAT	LHFPL6	ENSG00000183722.9	transcript	ENST00000379589.4	protein_coding	2/3			chr13	TogoVar

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