view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
LOC128092252_chr15_50643802_50691717 | 50682173 | C | CAAAAAAA others(2): Show |
intron_variant | MODIFIER | HG00423.hp1 HG00544.hp2 HG00639.hp2 others(62): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0011 others(59): Show |
65 | 388 | 0.1675 | 9 | c.187 others(26): Show |
LOC128092252 | ENSG00000288645.1 | transcript | ENST00000676296.1 | protein_coding | 1/3 | chr15 | TogoVar | |||||||
LOC128462377_chr16_89312046_89423292 | 89334144 | T | TTAAAAAA others(2): Show |
intron_variant | MODIFIER | HG01243.hp1 HG03453.hp2 NA20129.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0023 others(1): Show |
4 | 366 | 0.0109 | 9 | c.10- others(26): Show |
LOC128462377 | ENSG00000288715.2 | transcript | ENST00000711617.1 | protein_coding | 1/1 | chr16 | TogoVar | |||||||
LOC128462377_chr16_89312046_89423292 | 89337429 | C | CTTTTTTT others(2): Show |
intron_variant | MODIFIER | HG00280.hp1 HG00280.hp2 HG00323.hp2 others(28): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0007 a0001c0001t0001g0038 a0001c0001t0001g0096 others(28): Show |
31 | 366 | 0.0847 | 9 | c.10- others(26): Show |
LOC128462377 | ENSG00000288715.2 | transcript | ENST00000711617.1 | protein_coding | 1/1 | chr16 | TogoVar | |||||||
LOC128462377_chr16_89312046_89423292 | 89349134 | T | TAAAAAAA others(2): Show |
intron_variant | MODIFIER | HG00639.hp1 HG01081.hp1 HG01168.hp1 others(46): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0010 a0001c0001t0001g0013 a0001c0001t0001g0014 others(46): Show |
49 | 366 | 0.1339 | 9 | c.10- others(26): Show |
LOC128462377 | ENSG00000288715.2 | transcript | ENST00000711617.1 | protein_coding | 1/1 | chr16 | TogoVar | |||||||
LOC128462377_chr16_89312046_89423292 | 89388293 | A | ATTTTTTT others(2): Show |
intron_variant | MODIFIER | HG00140.hp2 HG00423.hp2 HG00597.hp1 others(48): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0006 a0001c0001t0001g0014 a0001c0001t0001g0017 others(48): Show |
51 | 366 | 0.1393 | 9 | c.9+2 others(24): Show |
LOC128462377 | ENSG00000288715.2 | transcript | ENST00000711617.1 | protein_coding | 1/1 | chr16 | TogoVar | |||||||
LOC128706665_chr20_10408708_10439222 | 10427080 | A | ACACACAC others(2): Show |
intron_variant | MODIFIER | HG02896.hp2 NA18988.hp1 NA18988.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0037 a0001c0001t0001g0251 a0001c0001t0002g0308 |
4 | 408 | 0.0098 | 9 | c.-21 others(26): Show |
LOC128706665 | ENSG00000285723.2 | transcript | ENST00000649912.2 | protein_coding | 1/2 | chr20 | TogoVar | |||||||
LOC128706666_chr20_10408708_10439222 | 10427080 | A | ACACACAC others(2): Show |
intron_variant | MODIFIER | HG02896.hp2 NA18988.hp1 NA18988.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0037 a0001c0001t0001g0251 a0001c0001t0002g0308 |
4 | 408 | 0.0098 | 9 | c.-27 others(28): Show |
LOC128706666 | ENSG00000285508.2 | transcript | ENST00000713549.1 | protein_coding | 1/2 | chr20 | TogoVar | |||||||
LOC400499_chr16_11367015_11532247 | 11369967 | A | ATATGTGT others(2): Show |
downstream_gene_variant | MODIFIER | HG00621.hp1 HG02056.hp1 HG03195.hp2 others(4): Show |
a0007a0031a0042others(4): Show | a0007c0004a0031c0016a0042c0086others(4): Show | a0007c0004t0004a0031c0016t0003a0042c0086t0009others(4): Show | a0007c0004t0004g0198 a0031c0016t0003g0092 a0042c0086t0009g0072 others(4): Show |
7 | 310 | 0.0226 | 9 | c.*27 others(20): Show |
LOC400499 | ENSG00000188897.10 | transcript | ENST00000696174.1 | protein_coding | 2047 | chr16 | TogoVar | |||||||
LOC400499_chr16_11367015_11532247 | 11387638 | A | ATTTTTTT others(2): Show |
intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00280.hp1 others(144): Show |
a0002a0005a0006others(118): Show | a0002c0001a0002c0059a0005c0126others(126): Show | a0002c0001t0003a0002c0059t0004a0005c0126t0003others(129): Show | a0002c0001t0003g0201 a0002c0001t0003g0202 a0002c0001t0003g0247 others(144): Show |
147 | 310 | 0.4742 | 9 | c.901 others(26): Show |
LOC400499 | ENSG00000188897.10 | transcript | ENST00000696174.1 | protein_coding | 60/66 | chr16 | TogoVar | |||||||
LOC400499_chr16_11367015_11532247 | 11419108 | G | GAGCTTGC others(2): Show |
intron_variant | MODIFIER | HG02723.hp2 HG03098.hp1 HG03579.hp2 |
a0129a0150a0174 | a0129c0053a0150c0046a0174c0069 | a0129c0053t0002a0150c0046t0006a0174c0069t0006 | a0129c0053t0002g0291 a0150c0046t0006g0235 a0174c0069t0006g0002 |
3 | 310 | 0.0097 | 9 | c.638 others(28): Show |
LOC400499 | ENSG00000188897.10 | transcript | ENST00000696174.1 | protein_coding | 42/66 | chr16 | TogoVar | |||||||
LOC400499_chr16_11367015_11532247 | 11443491 | A | AAAGAGAG others(2): Show |
intron_variant | MODIFIER | HG00099.hp1 HG00280.hp2 HG00738.hp2 others(30): Show |
a0024a0029a0030others(28): Show | a0024c0022a0029c0203a0030c0021others(28): Show | a0024c0022t0001a0029c0203t0001a0030c0021t0002others(28): Show | a0024c0022t0001g0056 a0024c0022t0001g0222 a0029c0203t0001g0232 others(30): Show |
33 | 310 | 0.1065 | 9 | c.483 others(28): Show |
LOC400499 | ENSG00000188897.10 | transcript | ENST00000696174.1 | protein_coding | 33/66 | chr16 | TogoVar | |||||||
LOC400499_chr16_11367015_11532247 | 11443491 | A | AGAGAGAG others(2): Show |
intron_variant | MODIFIER | HG01256.hp1 HG01943.hp2 HG03704.hp1 others(1): Show |
a0006a0080a0177others(1): Show | a0006c0005a0080c0215a0177c0160others(1): Show | a0006c0005t0003a0080c0215t0003a0177c0160t0004others(1): Show | a0006c0005t0003g0086 a0080c0215t0003g0108 a0177c0160t0004g0178 others(1): Show |
4 | 310 | 0.0129 | 9 | c.483 others(28): Show |
LOC400499 | ENSG00000188897.10 | transcript | ENST00000696174.1 | protein_coding | 33/66 | chr16 | TogoVar | |||||||
LOC400499_chr16_11367015_11532247 | 11500511 | A | AAATAATA others(2): Show |
intron_variant | MODIFIER | HG00741.hp1 HG01070.hp1 HG01071.hp2 others(31): Show |
a0015a0020a0023others(28): Show | a0015c0020a0020c0245a0023c0182others(29): Show | a0015c0020t0005a0020c0245t0002a0023c0182t0004others(29): Show | a0015c0020t0005g0229 a0015c0020t0005g0230 a0020c0245t0002g0081 others(31): Show |
34 | 310 | 0.1097 | 9 | c.124 others(26): Show |
LOC400499 | ENSG00000188897.10 | transcript | ENST00000696174.1 | protein_coding | 10/66 | chr16 | TogoVar | |||||||
LOC400499_chr16_11367015_11532247 | 11503127 | T | TTGCCCAG others(2): Show |
intron_variant | MODIFIER | HG00408.hp1 HG00738.hp1 HG00741.hp2 others(31): Show |
a0013a0019a0026others(27): Show | a0013c0018a0019c0009a0026c0008others(27): Show | a0013c0018t0003a0019c0009t0002a0026c0008t0002others(27): Show | a0013c0018t0003g0088 a0013c0018t0003g0089 a0019c0009t0002g0052 others(31): Show |
34 | 310 | 0.1097 | 9 | c.976 others(24): Show |
LOC400499 | ENSG00000188897.10 | transcript | ENST00000696174.1 | protein_coding | 8/66 | chr16 | TogoVar | |||||||
LOC647264_chr13_63827361_63838053 | 63832049 | A | AAATAATA others(2): Show |
downstream_gene_variant | MODIFIER | HG01175.hp2 HG02280.hp1 HG03098.hp1 others(5): Show |
a0002 | a0002c0002 | a0002c0002t0003 | a0002c0002t0003g0000 | 8 | 442 | 0.0181 | 9 | c.*61 others(18): Show |
LOC647264 | ENSG00000285566.2 | transcript | ENST00000648713.2 | protein_coding | 311 | chr13 | TogoVar | |||||||
LONP1_chr19_5686834_5725146 | 5714310 | A | ATTTTTTT others(2): Show |
intron_variant | MODIFIER | HG01346.hp1 HG02027.hp2 NA18943.hp1 others(3): Show |
a0003a0012 | a0003c0003a0012c0014 | a0003c0003t0001a0012c0014t0001 | a0003c0003t0001g0341 a0003c0003t0001g0342 a0003c0003t0001g0343 others(3): Show |
6 | 386 | 0.0155 | 9 | c.430 others(22): Show |
LONP1 | ENSG00000196365.12 | transcript | ENST00000360614.8 | protein_coding | 1/17 | chr19 | TogoVar | |||||||
LONP2_chr16_48239300_48362349 | 48298670 | T | TGTGTGTG others(2): Show |
intron_variant | MODIFIER | HG02055.hp2 HG04204.hp1 |
a0001 | a0001c0001 | a0001c0001t0010a0001c0001t0020 | a0001c0001t0010g0021 a0001c0001t0020g0037 |
2 | 154 | 0.0130 | 9 | c.153 others(26): Show |
LONP2 | ENSG00000102910.14 | transcript | ENST00000285737.9 | protein_coding | 9/14 | chr16 | TogoVar | |||||||
LONRF3_chrX_118969618_119023355 | 118979300 | C | CTTTTTTT others(2): Show |
intron_variant | MODIFIER | HG02717.hp1 | a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0049 | 1 | 309 | 0.0032 | 9 | c.936 others(24): Show |
LONRF3 | ENSG00000175556.17 | transcript | ENST00000371628.8 | protein_coding | 2/10 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||||
LONRF3_chrX_118969618_119023355 | 118987445 | G | GTTTTTTT others(2): Show |
intron_variant | MODIFIER | HG02055.hp1 | a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0124 | 1 | 309 | 0.0032 | 9 | c.106 others(28): Show |
LONRF3 | ENSG00000175556.17 | transcript | ENST00000371628.8 | protein_coding | 3/10 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||||
LOXHD1_chr18_46472273_46662220 | 46550579 | C | CAAAAAAA others(2): Show |
intron_variant | MODIFIER | HG01071.hp1 HG01106.hp2 HG01175.hp1 others(12): Show |
a0001a0003a0006others(2): Show | a0001c0001a0001c0071a0003c0003others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0071t0001others(7): Show | a0001c0001t0001g0041 a0001c0001t0001g0090 a0001c0001t0001g0174 others(12): Show |
15 | 270 | 0.0556 | 9 | c.335 others(28): Show |
LOXHD1 | ENSG00000167210.17 | transcript | ENST00000642948.1 | protein_coding | 21/40 | chr18 | TogoVar | |||||||
LOXL2_chr8_23291897_23409120 | 23354950 | T | TATATATA others(2): Show |
intron_variant | MODIFIER | HG01081.hp1 HG01943.hp1 HG01943.hp2 others(5): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0007others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0002t0001others(4): Show | a0001c0001t0001g0278 a0001c0001t0002g0039 a0001c0001t0002g0253 others(5): Show |
8 | 348 | 0.0230 | 9 | c.531 others(26): Show |
LOXL2 | ENSG00000134013.16 | transcript | ENST00000389131.8 | protein_coding | 3/13 | chr8 | TogoVar | |||||||
LPAR1_chr9_110868263_111043470 | 110922824 | A | ATATTATT others(2): Show |
intron_variant | MODIFIER | HG00438.hp2 HG00597.hp1 HG00609.hp1 others(70): Show |
a0001a0002a0004 | a0001c0001a0001c0002a0002c0004others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(13): Show | a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0007 others(70): Show |
73 | 302 | 0.2417 | 9 | c.793 others(28): Show |
LPAR1 | ENSG00000198121.15 | transcript | ENST00000683809.1 | protein_coding | 5/5 | chr9 | TogoVar | |||||||
LPAR3_chr1_84806602_84898206 | 84879316 | C | CTTTTTTT others(2): Show |
intron_variant | MODIFIER | HG00609.hp2 HG02056.hp2 HG02451.hp1 others(10): Show |
a0001a0005 | a0001c0001a0001c0005a0005c0007 | a0001c0001t0001a0001c0001t0002a0001c0001t0010others(8): Show | a0001c0001t0001g0242 a0001c0001t0001g0243 a0001c0001t0002g0164 others(10): Show |
13 | 382 | 0.0340 | 9 | c.-18 others(28): Show |
LPAR3 | ENSG00000171517.6 | transcript | ENST00000370611.4 | protein_coding | 1/2 | chr1 | TogoVar | |||||||
LPA_chr6_160526482_160669275 | 160584170 | T | TTTCTTCT others(2): Show |
intron_variant | MODIFIER | HG03486.hp2 NA18906.hp2 |
a0002a0005 | a0002c0012a0005c0005 | a0002c0012t0002a0005c0005t0002 | a0002c0012t0002g0013 a0005c0005t0002g0006 |
2 | 148 | 0.0135 | 9 | c.428 others(26): Show |
LPA | ENSG00000198670.13 | transcript | ENST00000316300.10 | protein_coding | 26/38 | chr6 | TogoVar | |||||||
LPA_chr6_160526482_160669275 | 160584237 | T | TTCTTCCT others(2): Show |
intron_variant | MODIFIER | HG01109.hp1 NA18948.hp1 NA19057.hp2 |
a0002a0006a0015 | a0002c0002a0006c0006a0015c0019 | a0002c0002t0003a0006c0006t0001a0015c0019t0003 | a0002c0002t0003g0147 a0006c0006t0001g0099 a0015c0019t0003g0133 |
3 | 148 | 0.0203 | 9 | c.428 others(26): Show |
LPA | ENSG00000198670.13 | transcript | ENST00000316300.10 | protein_coding | 26/38 | chr6 | TogoVar | |||||||
LPA_chr6_160526482_160669275 | 160584270 | C | CTCTTCCT others(2): Show |
intron_variant | MODIFIER | HG00280.hp2 HG00642.hp1 HG01952.hp2 others(3): Show |
a0002a0014a0018 | a0002c0002a0014c0028a0018c0034 | a0002c0002t0001a0002c0002t0003a0014c0028t0003others(1): Show | a0002c0002t0001g0103 a0002c0002t0003g0142 a0002c0002t0003g0144 others(3): Show |
6 | 148 | 0.0405 | 9 | c.428 others(26): Show |
LPA | ENSG00000198670.13 | transcript | ENST00000316300.10 | protein_coding | 26/38 | chr6 | TogoVar | |||||||
LPCAT2_chr16_55504072_55591666 | 55509991 | C | CTTTTTTT others(2): Show |
intron_variant | MODIFIER | HG01433.hp1 HG02071.hp1 HG02071.hp2 others(15): Show |
a0001 | a0001c0002a0001c0003 | a0001c0002t0001a0001c0002t0004a0001c0002t0005others(5): Show | a0001c0002t0001g0252 a0001c0002t0001g0253 a0001c0002t0001g0254 others(15): Show |
18 | 314 | 0.0573 | 9 | c.171 others(24): Show |
LPCAT2 | ENSG00000087253.13 | transcript | ENST00000262134.10 | protein_coding | 1/13 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
LPCAT2_chr16_55504072_55591666 | 55580836 | A | ATTCTCAT others(2): Show |
intron_variant | MODIFIER | HG00140.hp1 HG00280.hp1 HG00408.hp2 others(168): Show |
a0001a0002a0003others(2): Show | a0001c0002a0001c0003a0002c0001others(4): Show | a0001c0002t0002a0001c0002t0003a0001c0002t0005others(54): Show | a0001c0002t0002g0008 a0001c0002t0002g0033 a0001c0002t0003g0025 others(155): Show |
171 | 314 | 0.5446 | 9 | c.145 others(28): Show |
LPCAT2 | ENSG00000087253.13 | transcript | ENST00000262134.10 | protein_coding | 13/13 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
LPCAT4_chr15_34353633_34372196 | 34364590 | A | ATTTTTTT others(2): Show |
intron_variant | MODIFIER | HG00099.hp2 HG00140.hp1 HG00280.hp2 others(114): Show |
a0001a0005a0008 | a0001c0001a0001c0002a0005c0011others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(3): Show | a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0033 others(26): Show |
117 | 450 | 0.2600 | 9 | c.479 others(24): Show |
LPCAT4 | ENSG00000176454.15 | transcript | ENST00000314891.11 | protein_coding | 3/13 | chr15 | TogoVar | |||||||
LPCAT4_chr15_34353633_34372196 | 34369608 | A | ATTTTTTT others(2): Show |
upstream_gene_variant | MODIFIER | HG00438.hp2 HG02004.hp1 HG02056.hp1 others(31): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0001t0002a0001c0003t0001 | a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0029 others(15): Show |
34 | 450 | 0.0756 | 9 | c.-25 others(20): Show |
LPCAT4 | ENSG00000176454.15 | transcript | ENST00000314891.11 | protein_coding | 2413 | chr15 | TogoVar | |||||||
LPGAT1_chr1_211738457_211835763 | 211744784 | T | TGGGAGAA others(2): Show |
3_prime_UTR_variant | MODIFIER | HG01109.hp2 HG01891.hp2 HG02109.hp2 others(11): Show |
a0001 | a0001c0001 | a0001c0001t0007a0001c0001t0024a0001c0001t0038 | a0001c0001t0007g0005 a0001c0001t0007g0222 a0001c0001t0007g0223 others(9): Show |
14 | 332 | 0.0422 | 9 | c.*51 others(20): Show |
LPGAT1 | ENSG00000123684.13 | transcript | ENST00000366997.9 | protein_coding | 8/8 | 5114 | chr1 | TogoVar | ||||||
LPGAT1_chr1_211738457_211835763 | 211774132 | C | CTTTTTTT others(2): Show |
intron_variant | MODIFIER | HG00621.hp2 HG01109.hp1 HG02027.hp1 others(21): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0003a0001c0001t0010others(5): Show | a0001c0001t0002g0031 a0001c0001t0002g0034 a0001c0001t0002g0041 others(21): Show |
24 | 332 | 0.0723 | 9 | c.854 others(26): Show |
LPGAT1 | ENSG00000123684.13 | transcript | ENST00000366997.9 | protein_coding | 6/7 | chr1 | TogoVar | |||||||
LPIN1_chr2_11741632_11832409 | 11752433 | A | ATTTTTTT others(2): Show |
intron_variant | MODIFIER | HG00099.hp2 HG01361.hp1 HG01496.hp1 others(34): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0002a0001c0005others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(16): Show | a0001c0001t0001g0103 a0001c0001t0001g0259 a0001c0001t0001g0260 others(34): Show |
37 | 278 | 0.1331 | 9 | c.-10 others(26): Show |
LPIN1 | ENSG00000134324.12 | transcript | ENST00000674199.1 | protein_coding | 1/20 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
LPIN1_chr2_11741632_11832409 | 11753206 | G | GGGCTTTG others(2): Show |
intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00280.hp2 others(126): Show |
a0001a0002a0003others(3): Show | a0001c0001a0001c0002a0001c0003others(9): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(37): Show | a0001c0001t0001g0026 a0001c0001t0001g0103 a0001c0001t0001g0107 others(126): Show |
129 | 278 | 0.4640 | 9 | c.-10 others(26): Show |
LPIN1 | ENSG00000134324.12 | transcript | ENST00000674199.1 | protein_coding | 1/20 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
LPIN2_chr18_2911999_3018144 | 3000118 | A | AAGGAGGA others(2): Show |
intron_variant | MODIFIER | HG01169.hp1 HG02258.hp2 NA18906.hp2 |
a0001 | a0001c0001 | a0001c0001t0004a0001c0001t0085 | a0001c0001t0004g0184 a0001c0001t0004g0373 a0001c0001t0085g0159 |
3 | 380 | 0.0079 | 9 | c.-10 others(28): Show |
LPIN2 | ENSG00000101577.11 | transcript | ENST00000677752.1 | protein_coding | 1/19 | chr18 | TogoVar | |||||||
LPIN3_chr20_41335821_41365582 | 41337926 | T | TAAAAAAA others(2): Show |
upstream_gene_variant | MODIFIER | HG00323.hp1 HG00738.hp2 HG01346.hp2 others(8): Show |
a0001a0002a0004 | a0001c0001a0002c0003a0002c0010others(2): Show | a0001c0001t0010a0002c0003t0005a0002c0003t0017others(4): Show | a0001c0001t0010g0090 a0002c0003t0005g0007 a0002c0003t0005g0037 others(7): Show |
11 | 404 | 0.0272 | 9 | c.-30 others(20): Show |
LPIN3 | ENSG00000132793.12 | transcript | ENST00000373257.8 | protein_coding | 2894 | chr20 | TogoVar | |||||||
LPP_chr3_188149157_188895671 | 188269643 | T | TTTATATG others(2): Show |
intron_variant | MODIFIER | HG01167.hp2 HG01256.hp2 HG02622.hp2 others(2): Show |
a0001a0002 | a0001c0001a0001c0005a0002c0003 | a0001c0001t0008a0001c0001t0018a0001c0001t0051others(2): Show | a0001c0001t0008g0065 a0001c0001t0018g0072 a0001c0001t0051g0019 others(2): Show |
5 | 76 | 0.0658 | 9 | c.-67 others(28): Show |
LPP | ENSG00000145012.15 | transcript | ENST00000617246.5 | protein_coding | 2/11 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
LPP_chr3_188149157_188895671 | 188422913 | T | TGTGTGTG others(2): Show |
intron_variant | MODIFIER | HG01256.hp1 HG02622.hp1 HG03098.hp1 others(1): Show |
a0002 | a0002c0003a0002c0004 | a0002c0003t0009a0002c0004t0039a0002c0004t0067others(1): Show | a0002c0003t0009g0070 a0002c0004t0039g0053 a0002c0004t0067g0008 others(1): Show |
4 | 76 | 0.0526 | 9 | c.193 others(28): Show |
LPP | ENSG00000145012.15 | transcript | ENST00000617246.5 | protein_coding | 4/11 | chr3 | TogoVar | |||||||
LPP_chr3_188149157_188895671 | 188485796 | C | CAAAAAAA others(2): Show |
intron_variant | MODIFIER | HG00639.hp1 HG01175.hp1 HG01978.hp1 others(2): Show |
a0001a0002 | a0001c0001a0001c0006a0002c0003others(1): Show | a0001c0001t0001a0001c0006t0034a0001c0006t0066others(2): Show | a0001c0001t0001g0056 a0001c0006t0034g0039 a0001c0006t0066g0021 others(2): Show |
5 | 76 | 0.0658 | 9 | c.306 others(26): Show |
LPP | ENSG00000145012.15 | transcript | ENST00000617246.5 | protein_coding | 5/11 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
LPP_chr3_188149157_188895671 | 188603023 | A | AAATAATA others(2): Show |
intron_variant | MODIFIER | HG01081.hp1 HG02886.hp1 |
a0001a0002 | a0001c0006a0002c0004 | a0001c0006t0032a0002c0004t0033 | a0001c0006t0032g0005 a0002c0004t0033g0062 |
2 | 76 | 0.0263 | 9 | c.430 others(26): Show |
LPP | ENSG00000145012.15 | transcript | ENST00000617246.5 | protein_coding | 6/11 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
LPP_chr3_188149157_188895671 | 188687775 | C | CTTTTTTT others(2): Show |
intron_variant | MODIFIER | HG02622.hp1 HG02922.hp1 HG02970.hp2 others(1): Show |
a0001a0002a0003 | a0001c0002a0002c0004a0003c0009others(1): Show | a0001c0002t0010a0002c0004t0039a0003c0009t0062others(1): Show | a0001c0002t0010g0025 a0002c0004t0039g0053 a0003c0009t0062g0017 others(1): Show |
4 | 76 | 0.0526 | 9 | c.111 others(30): Show |
LPP | ENSG00000145012.15 | transcript | ENST00000617246.5 | protein_coding | 7/11 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
LPP_chr3_188149157_188895671 | 188797115 | C | CCCTCCTC others(2): Show |
intron_variant | MODIFIER | HG01358.hp2 HG02970.hp1 HG03098.hp2 others(6): Show |
a0001a0002a0003others(2): Show | a0001c0006a0002c0003a0002c0004others(3): Show | a0001c0006t0064a0002c0003t0004a0002c0003t0052others(6): Show | a0001c0006t0064g0007 a0002c0003t0004g0044 a0002c0003t0052g0014 others(6): Show |
9 | 76 | 0.1184 | 9 | c.141 others(30): Show |
LPP | ENSG00000145012.15 | transcript | ENST00000617246.5 | protein_coding | 9/11 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
LPP_chr3_188149157_188895671 | 188797623 | A | ATTGAAAT others(2): Show |
intron_variant | MODIFIER | HG00438.hp2 HG01358.hp1 HG01361.hp1 others(5): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0005others(2): Show | a0001c0001t0005a0001c0001t0061a0001c0002t0050others(5): Show | a0001c0001t0005g0032 a0001c0001t0061g0023 a0001c0002t0050g0052 others(5): Show |
8 | 76 | 0.1053 | 9 | c.141 others(30): Show |
LPP | ENSG00000145012.15 | transcript | ENST00000617246.5 | protein_coding | 9/11 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
LPP_chr3_188149157_188895671 | 188828614 | C | CAAAAAAA others(2): Show |
intron_variant | MODIFIER | HG01167.hp2 HG01256.hp1 HG02074.hp1 others(6): Show |
a0001a0002a0005 | a0001c0001a0001c0002a0002c0003others(2): Show | a0001c0001t0018a0001c0001t0025a0001c0002t0001others(6): Show | a0001c0001t0018g0072 a0001c0001t0025g0068 a0001c0002t0001g0029 others(6): Show |
9 | 76 | 0.1184 | 9 | c.141 others(30): Show |
LPP | ENSG00000145012.15 | transcript | ENST00000617246.5 | protein_coding | 9/11 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
LPP_chr3_188149157_188895671 | 188837382 | C | CATAATAA others(2): Show |
intron_variant | MODIFIER | HG01074.hp2 HG02738.hp2 HG02886.hp1 others(3): Show |
a0001a0002a0003 | a0001c0001a0001c0005a0001c0006others(2): Show | a0001c0001t0026a0001c0005t0031a0001c0006t0041others(3): Show | a0001c0001t0026g0069 a0001c0005t0031g0003 a0001c0006t0041g0002 others(3): Show |
6 | 76 | 0.0790 | 9 | c.141 others(30): Show |
LPP | ENSG00000145012.15 | transcript | ENST00000617246.5 | protein_coding | 9/11 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
LPP_chr3_188149157_188895671 | 188837382 | C | CATCATAA others(2): Show |
intron_variant | MODIFIER | HG01361.hp1 HG01978.hp2 NA20752.hp2 |
a0001 | a0001c0001 | a0001c0001t0005a0001c0001t0061 | a0001c0001t0005g0024 a0001c0001t0005g0032 a0001c0001t0061g0023 |
3 | 76 | 0.0395 | 9 | c.141 others(30): Show |
LPP | ENSG00000145012.15 | transcript | ENST00000617246.5 | protein_coding | 9/11 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
LRBA_chr4_150259435_151020284 | 150648158 | C | CAAAAAAA others(2): Show |
intron_variant | MODIFIER | HG02109.hp1 HG02559.hp2 HG02647.hp1 others(10): Show |
a0001a0014a0017 | a0001c0001a0001c0013a0001c0037others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(4): Show | a0001c0001t0001g0086 a0001c0001t0001g0152 a0001c0001t0002g0169 others(10): Show |
13 | 180 | 0.0722 | 9 | c.592 others(30): Show |
LRBA | ENSG00000198589.15 | transcript | ENST00000651943.2 | protein_coding | 37/56 | chr4 | TogoVar | |||||||
LRBA_chr4_150259435_151020284 | 150658505 | G | GTCTCCTC others(2): Show |
intron_variant | MODIFIER | HG01255.hp2 HG02451.hp1 HG03130.hp1 others(4): Show |
a0001a0002a0003 | a0001c0001a0001c0005a0001c0013others(2): Show | a0001c0001t0001a0001c0005t0001a0001c0013t0003others(2): Show | a0001c0001t0001g0021 a0001c0001t0001g0026 a0001c0001t0001g0076 others(4): Show |
7 | 180 | 0.0389 | 9 | c.592 others(30): Show |
LRBA | ENSG00000198589.15 | transcript | ENST00000651943.2 | protein_coding | 37/56 | chr4 | TogoVar | |||||||
LRBA_chr4_150259435_151020284 | 150685420 | A | ATATATTT others(2): Show |
intron_variant | MODIFIER | HG01517.hp1 HG02074.hp2 HG02132.hp1 others(4): Show |
a0001a0011 | a0001c0001a0001c0007a0011c0031 | a0001c0001t0002a0001c0001t0003a0001c0007t0003others(1): Show | a0001c0001t0002g0022 a0001c0001t0002g0040 a0001c0001t0002g0043 others(4): Show |
7 | 180 | 0.0389 | 9 | c.575 others(28): Show |
LRBA | ENSG00000198589.15 | transcript | ENST00000651943.2 | protein_coding | 36/56 | chr4 | TogoVar | |||||||
LRBA_chr4_150259435_151020284 | 150685421 | T | TATATATA others(2): Show |
intron_variant | MODIFIER | HG00735.hp1 HG02559.hp1 |
a0003a0013 | a0003c0042a0013c0039 | a0003c0042t0003a0013c0039t0001 | a0003c0042t0003g0179 a0013c0039t0001g0072 |
2 | 180 | 0.0111 | 9 | c.575 others(28): Show |
LRBA | ENSG00000198589.15 | transcript | ENST00000651943.2 | protein_coding | 36/56 | chr4 | TogoVar |