Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
PCDH15_chr10_53797771_54806231	54250077	C C	CTATTTTT others(2): Show CTATTTTTTT	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG01069.hp1 HG02109.hp1 others(5): Show HG00735.hp1 HG01069.hp1 HG02109.hp1 HG02145.hp1 HG02896.hp2 HG02965.hp2 HG03139.hp2 NA19240.hp1	a0001 a0003 a0007 others(3): Show a0001 a0003 a0007 a0016 a0020 a0037	a0001c0001 a0003c0003 a0007c0007 others(3): Show a0001c0001 a0003c0003 a0007c0007 a0016c0012 a0020c0027 a0037c0018	a0001c0001t0014 a0003c0003t0001 a0003c0003t0004 others(5): Show a0001c0001t0014 a0003c0003t0001 a0003c0003t0004 a0003c0003t0009 a0007c0007t0003 a0016c0012t0001 a0020c0027t0001 a0037c0018t0001	a0001c0001t0014g0067 a0003c0003t0001g0017 a0003c0003t0004g0088 others(5): Show a0001c0001t0014g0067 a0003c0003t0001g0017 a0003c0003t0004g0088 a0003c0003t0009g0018 a0007c0007t0003g0065 a0016c0012t0001g0008 a0020c0027t0001g0080 a0037c0018t0001g0004	8	102	0.0784	9	c.877 others(28): Show c.877-13147_877-13146insAAAAAAATA	PCDH15	ENSG00000150275.20	transcript	ENST00000644397.2	protein_coding	8/37			chr10	TogoVar
PCDH15_chr10_53797771_54806231	54301112	C C	CTTTGTCT others(2): Show CTTTGTCTTA	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG00738.hp1 HG01069.hp2 others(7): Show HG00642.hp2 HG00738.hp1 HG01069.hp2 HG01081.hp1 HG01167.hp2 HG01175.hp2 HG01261.hp1 HG02109.hp2 HG02965.hp1 homoSapiens_chm13v2.hp1	a0001 a0004 a0008 others(3): Show a0001 a0004 a0008 a0009 a0014 a0029	a0001c0001 a0004c0004 a0008c0010 others(3): Show a0001c0001 a0004c0004 a0008c0010 a0009c0008 a0014c0014 a0029c0035	a0001c0001t0001 a0001c0001t0002 a0004c0004t0005 others(4): Show a0001c0001t0001 a0001c0001t0002 a0004c0004t0005 a0008c0010t0001 a0009c0008t0001 a0014c0014t0001 a0029c0035t0005	a0001c0001t0001g0022 a0001c0001t0001g0039 a0001c0001t0002g0070 others(7): Show a0001c0001t0001g0022 a0001c0001t0001g0039 a0001c0001t0002g0070 a0004c0004t0005g0024 a0004c0004t0005g0025 a0004c0004t0005g0057 a0008c0010t0001g0068 a0009c0008t0001g0048 a0014c0014t0001g0012 a0029c0035t0005g0100	10	102	0.0980	9	c.876 others(28): Show c.876+16158_876+16159insTAAGACAAA	PCDH15	ENSG00000150275.20	transcript	ENST00000644397.2	protein_coding	8/37			chr10	TogoVar
PCDH15_chr10_53797771_54806231	54375896	T T	TATATATA others(2): Show TATATATATA	intron_variant intron_variant	MODIFIER	HG01069.hp1 HG01167.hp1 HG01069.hp1 HG01167.hp1	a0001 a0026 a0001 a0026	a0001c0001 a0026c0033 a0001c0001 a0026c0033	a0001c0001t0014 a0026c0033t0017 a0001c0001t0014 a0026c0033t0017	a0001c0001t0014g0067 a0026c0033t0017g0023 a0001c0001t0014g0067 a0026c0033t0017g0023	2	102	0.0196	9	c.318 others(26): Show c.318+2885_318+2886insTATATATAT	PCDH15	ENSG00000150275.20	transcript	ENST00000644397.2	protein_coding	4/37			chr10	TogoVar
PCDH15_chr10_53797771_54806231	54380711	T T	TATATGCT others(2): Show TATATGCTCC	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG00735.hp2 HG01069.hp2 others(19): Show HG00642.hp2 HG00735.hp2 HG01069.hp2 HG01081.hp1 HG01167.hp2 HG01175.hp1 HG01175.hp2 HG01243.hp1 HG01261.hp1 HG01934.hp2 HG01981.hp2 HG02027.hp1 HG02109.hp2 HG02965.hp1 HG03041.hp1 HG03710.hp1 HG06807.hp1 NA18945.hp1 NA19088.hp1 NA20129.hp2 NA20905.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(9): Show a0001 a0002 a0003 a0004 a0005 a0006 a0007 a0008 a0009 a0014 a0029 a0031	a0001c0001 a0002c0002 a0003c0003 others(9): Show a0001c0001 a0002c0002 a0003c0003 a0004c0004 a0005c0005 a0006c0006 a0007c0007 a0008c0010 a0009c0008 a0014c0014 a0029c0035 a0031c0020	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(14): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0002c0002t0002 a0002c0002t0007 a0003c0003t0003 a0003c0003t0006 a0004c0004t0005 a0005c0005t0009 a0006c0006t0005 a0007c0007t0002 a0007c0007t0022 a0008c0010t0001 a0009c0008t0001 a0014c0014t0001 a0029c0035t0005 a0031c0020t0007	a0001c0001t0001g0022 a0001c0001t0001g0044 a0001c0001t0002g0070 others(19): Show a0001c0001t0001g0022 a0001c0001t0001g0044 a0001c0001t0002g0070 a0001c0001t0003g0015 a0002c0002t0002g0037 a0002c0002t0002g0063 a0002c0002t0007g0038 a0003c0003t0003g0056 a0003c0003t0003g0092 a0003c0003t0006g0051 a0004c0004t0005g0024 a0004c0004t0005g0025 a0004c0004t0005g0057 a0005c0005t0009g0085 a0006c0006t0005g0055 a0007c0007t0002g0011 a0007c0007t0022g0075 a0008c0010t0001g0068 a0009c0008t0001g0048 a0014c0014t0001g0012 a0029c0035t0005g0100 a0031c0020t0007g0083	22	102	0.2157	9	c.158 others(26): Show c.158-1770_158-1769insGGAGCATAT	PCDH15	ENSG00000150275.20	transcript	ENST00000644397.2	protein_coding	3/37			chr10	TogoVar
PCDH15_chr10_53797771_54806231	54462496	T T	TTTTCTTT others(2): Show TTTTCTTTTC	intron_variant intron_variant	MODIFIER	HG02486.hp1 HG02922.hp2 HG03139.hp1 HG02486.hp1 HG02922.hp2 HG03139.hp1	a0002 a0013 a0002 a0013	a0002c0002 a0002c0021 a0013c0015 a0002c0002 a0002c0021 a0013c0015	a0002c0002t0008 a0002c0021t0021 a0013c0015t0001 a0002c0002t0008 a0002c0021t0021 a0013c0015t0001	a0002c0002t0008g0019 a0002c0021t0021g0047 a0013c0015t0001g0029 a0002c0002t0008g0019 a0002c0021t0021g0047 a0013c0015t0001g0029	3	102	0.0294	9	c.157 others(28): Show c.157+65315_157+65316insGAAAAGAAA	PCDH15	ENSG00000150275.20	transcript	ENST00000644397.2	protein_coding	3/37			chr10	TogoVar
PCDH15_chr10_53797771_54806231	54630109	C C	CCATGCTC others(2): Show CCATGCTCAT	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG02109.hp1 HG02896.hp1 others(3): Show HG01243.hp1 HG02109.hp1 HG02896.hp1 HG03098.hp1 HG06807.hp2 NA18945.hp2	a0002 a0006 a0007 others(2): Show a0002 a0006 a0007 a0010 a0031	a0002c0002 a0006c0006 a0007c0007 others(2): Show a0002c0002 a0006c0006 a0007c0007 a0010c0009 a0031c0020	a0002c0002t0004 a0002c0002t0009 a0006c0006t0002 others(3): Show a0002c0002t0004 a0002c0002t0009 a0006c0006t0002 a0007c0007t0003 a0010c0009t0011 a0031c0020t0007	a0002c0002t0004g0077 a0002c0002t0009g0027 a0006c0006t0002g0050 others(3): Show a0002c0002t0004g0077 a0002c0002t0009g0027 a0006c0006t0002g0050 a0007c0007t0003g0065 a0010c0009t0011g0078 a0031c0020t0007g0083	6	102	0.0588	9	c.91+ others(26): Show c.91+34054_91+34062dupATGAGCATG	PCDH15	ENSG00000150275.20	transcript	ENST00000644397.2	protein_coding	2/37			chr10	TogoVar
PCDH15_chr10_53816099_54806231	53828483	C C	CAGGCTGA others(2): Show CAGGCTGACT	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG03130.hp2 HG02486.hp2 HG03130.hp2	a0020 a0027 a0020 a0027	a0020c0037 a0027c0027 a0020c0037 a0027c0027	a0020c0037t0001 a0027c0027t0008 a0020c0037t0001 a0027c0027t0008	a0020c0037t0001g0091 a0027c0027t0008g0039 a0020c0037t0001g0091 a0027c0027t0008g0039	2	94	0.0213	9	c.421 others(24): Show c.4211+73_4211+81dupAGTCAGCCT	PCDH15	ENSG00000150275.20	transcript	ENST00000320301.11	protein_coding	31/32			chr10	TogoVar
PCDH15_chr10_53816099_54806231	53888702	T T	TATATATA others(2): Show TATATATATA	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG00741.hp1 HG02922.hp2 others(4): Show HG00642.hp2 HG00741.hp1 HG02922.hp2 HG02965.hp1 HG03492.hp1 HG04184.hp2 NA19240.hp1	a0003 a0004 a0005 others(3): Show a0003 a0004 a0005 a0013 a0014 a0023	a0003c0003 a0004c0004 a0005c0046 others(3): Show a0003c0003 a0004c0004 a0005c0046 a0013c0017 a0014c0012 a0023c0048	a0003c0003t0001 a0004c0004t0001 a0005c0046t0001 others(3): Show a0003c0003t0001 a0004c0004t0001 a0005c0046t0001 a0013c0017t0001 a0014c0012t0001 a0023c0048t0007	a0003c0003t0001g0017 a0003c0003t0001g0030 a0004c0004t0001g0037 others(4): Show a0003c0003t0001g0017 a0003c0003t0001g0030 a0004c0004t0001g0037 a0005c0046t0001g0065 a0013c0017t0001g0026 a0014c0012t0001g0008 a0023c0048t0007g0002	7	94	0.0745	9	c.350 others(30): Show c.3501+14540_3501+14541insTATATATAT	PCDH15	ENSG00000150275.20	transcript	ENST00000320301.11	protein_coding	26/32			chr10	TogoVar
PCDH15_chr10_53816099_54806231	53897959	C C	CTTTTTTT others(2): Show CTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01192.hp2 HG01884.hp2 HG02145.hp1 others(5): Show HG01192.hp2 HG01884.hp2 HG02145.hp1 HG02280.hp2 HG03041.hp2 HG03139.hp2 HG03540.hp2 NA18906.hp1	a0002 a0005 a0018 others(3): Show a0002 a0005 a0018 a0025 a0028 a0033	a0002c0002 a0002c0006 a0005c0036 others(4): Show a0002c0002 a0002c0006 a0005c0036 a0018c0034 a0025c0041 a0028c0031 a0033c0022	a0002c0002t0002 a0002c0002t0010 a0002c0006t0005 others(5): Show a0002c0002t0002 a0002c0002t0010 a0002c0006t0005 a0005c0036t0001 a0018c0034t0003 a0025c0041t0002 a0028c0031t0001 a0033c0022t0001	a0002c0002t0002g0038 a0002c0002t0010g0060 a0002c0006t0005g0074 others(5): Show a0002c0002t0002g0038 a0002c0002t0010g0060 a0002c0006t0005g0074 a0005c0036t0001g0077 a0018c0034t0003g0013 a0025c0041t0002g0057 a0028c0031t0001g0051 a0033c0022t0001g0004	8	94	0.0851	9	c.350 others(28): Show c.3501+5275_3501+5283dupAAAAAAAAA	PCDH15	ENSG00000150275.20	transcript	ENST00000320301.11	protein_coding	26/32			chr10	TogoVar
PCDH15_chr10_53816099_54806231	54004426	C C	CACACACA others(2): Show CACACACACA	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG01884.hp2 HG02280.hp2 others(10): Show HG01243.hp1 HG01884.hp2 HG02280.hp2 HG02486.hp1 HG02622.hp2 HG03041.hp1 HG03130.hp1 HG03209.hp1 HG03540.hp2 HG06807.hp1 HG06807.hp2 NA18906.hp1 NA19240.hp2	a0001 a0002 a0003 others(6): Show a0001 a0002 a0003 a0015 a0021 a0025 a0028 a0029 a0030	a0001c0001 a0001c0007 a0002c0002 others(7): Show a0001c0001 a0001c0007 a0002c0002 a0003c0003 a0015c0011 a0021c0038 a0025c0041 a0028c0031 a0029c0030 a0030c0028	a0001c0001t0001 a0001c0007t0001 a0002c0002t0002 others(8): Show a0001c0001t0001 a0001c0007t0001 a0002c0002t0002 a0002c0002t0010 a0003c0003t0002 a0015c0011t0001 a0021c0038t0004 a0025c0041t0002 a0028c0031t0001 a0029c0030t0001 a0030c0028t0001	a0001c0001t0001g0082 a0001c0007t0001g0090 a0002c0002t0002g0038 others(10): Show a0001c0001t0001g0082 a0001c0007t0001g0090 a0002c0002t0002g0038 a0002c0002t0002g0071 a0002c0002t0002g0089 a0002c0002t0010g0060 a0003c0003t0002g0005 a0015c0011t0001g0078 a0021c0038t0004g0007 a0025c0041t0002g0057 a0028c0031t0001g0051 a0029c0030t0001g0035 a0030c0028t0001g0044	13	94	0.1383	9	c.275 others(28): Show c.2752-8662_2752-8661insTGTGTGTGT	PCDH15	ENSG00000150275.20	transcript	ENST00000320301.11	protein_coding	20/32			chr10	TogoVar
PCDH15_chr10_53816099_54806231	54198495	C C	CTTTTTTT others(2): Show CTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG01243.hp1 HG02027.hp2 others(7): Show HG00741.hp1 HG01243.hp1 HG02027.hp2 HG02145.hp1 HG02965.hp2 HG03041.hp1 HG03209.hp2 HG03492.hp2 NA19088.hp2 NA20129.hp1	a0001 a0004 a0006 others(3): Show a0001 a0004 a0006 a0011 a0012 a0018	a0001c0001 a0001c0007 a0004c0004 others(5): Show a0001c0001 a0001c0007 a0004c0004 a0004c0044 a0006c0008 a0011c0021 a0012c0020 a0018c0034	a0001c0001t0001 a0001c0007t0001 a0004c0004t0001 others(5): Show a0001c0001t0001 a0001c0007t0001 a0004c0004t0001 a0004c0044t0001 a0006c0008t0001 a0011c0021t0001 a0012c0020t0001 a0018c0034t0003	a0001c0001t0001g0082 a0001c0007t0001g0090 a0004c0004t0001g0023 others(7): Show a0001c0001t0001g0082 a0001c0007t0001g0090 a0004c0004t0001g0023 a0004c0004t0001g0037 a0004c0004t0001g0048 a0004c0044t0001g0088 a0006c0008t0001g0027 a0011c0021t0001g0066 a0012c0020t0001g0025 a0018c0034t0003g0013	10	94	0.1064	9	c.109 others(28): Show c.1099-2615_1099-2607dupAAAAAAAAA	PCDH15	ENSG00000150275.20	transcript	ENST00000320301.11	protein_coding	10/32			chr10	TogoVar
PCDH15_chr10_53816099_54806231	54199564	C C	CAATAATA others(2): Show CAATAATAAT	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02486.hp1 HG03209.hp1 HG02258.hp1 HG02486.hp1 HG03209.hp1	a0015 a0030 a0032 a0015 a0030 a0032	a0015c0011 a0030c0028 a0032c0023 a0015c0011 a0030c0028 a0032c0023	a0015c0011t0001 a0030c0028t0001 a0032c0023t0006 a0015c0011t0001 a0030c0028t0001 a0032c0023t0006	a0015c0011t0001g0078 a0030c0028t0001g0044 a0032c0023t0006g0001 a0015c0011t0001g0078 a0030c0028t0001g0044 a0032c0023t0006g0001	3	94	0.0319	9	c.109 others(28): Show c.1099-3676_1099-3675insATTATTATT	PCDH15	ENSG00000150275.20	transcript	ENST00000320301.11	protein_coding	10/32			chr10	TogoVar
PCDH15_chr10_53816099_54806231	54199567	C C	CAATAATA others(2): Show CAATAATAAT	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG01081.hp1 HG01261.hp1 others(14): Show HG00741.hp2 HG01081.hp1 HG01261.hp1 HG01884.hp1 HG01884.hp2 HG01934.hp1 HG01981.hp2 HG02280.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03471.hp1 HG03540.hp1 HG03669.hp1 HG03942.hp1 NA18906.hp2 NA19240.hp2	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0026 a0027 a0028	a0001c0001 a0001c0007 a0002c0002 others(5): Show a0001c0001 a0001c0007 a0002c0002 a0003c0003 a0003c0005 a0026c0026 a0027c0027 a0028c0031	a0001c0001t0001 a0001c0007t0001 a0002c0002t0001 others(8): Show a0001c0001t0001 a0001c0007t0001 a0002c0002t0001 a0002c0002t0002 a0002c0002t0010 a0003c0003t0001 a0003c0003t0002 a0003c0005t0001 a0026c0026t0001 a0027c0027t0008 a0028c0031t0001	a0001c0001t0001g0010 a0001c0001t0001g0014 a0001c0001t0001g0040 others(14): Show a0001c0001t0001g0010 a0001c0001t0001g0014 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0007t0001g0087 a0002c0002t0001g0052 a0002c0002t0001g0063 a0002c0002t0001g0085 a0002c0002t0002g0019 a0002c0002t0002g0089 a0002c0002t0010g0060 a0003c0003t0001g0009 a0003c0003t0002g0005 a0003c0005t0001g0076 a0026c0026t0001g0056 a0027c0027t0008g0039 a0028c0031t0001g0051	17	94	0.1809	9	c.109 others(28): Show c.1099-3679_1099-3678insATTATTATT	PCDH15	ENSG00000150275.20	transcript	ENST00000320301.11	protein_coding	10/32			chr10	TogoVar
PCDH15_chr10_53816099_54806231	54199570	C C	CAACAATA others(2): Show CAACAATAAT	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG01243.hp1 HG02258.hp2 others(3): Show HG00642.hp1 HG01243.hp1 HG02258.hp2 HG02622.hp1 HG03041.hp2 HG03098.hp2	a0001 a0005 a0008 a0001 a0005 a0008	a0001c0001 a0005c0036 a0008c0015 a0001c0001 a0005c0036 a0008c0015	a0001c0001t0001 a0001c0001t0002 a0005c0036t0001 others(1): Show a0001c0001t0001 a0001c0001t0002 a0005c0036t0001 a0008c0015t0001	a0001c0001t0001g0006 a0001c0001t0001g0064 a0001c0001t0001g0082 others(3): Show a0001c0001t0001g0006 a0001c0001t0001g0064 a0001c0001t0001g0082 a0001c0001t0002g0028 a0005c0036t0001g0077 a0008c0015t0001g0032	6	94	0.0638	9	c.109 others(28): Show c.1099-3682_1099-3681insATTATTGTT	PCDH15	ENSG00000150275.20	transcript	ENST00000320301.11	protein_coding	10/32			chr10	TogoVar
PCDH15_chr10_53816099_54806231	54199570	C C	CAATAATA others(2): Show CAATAATAAT	intron_variant intron_variant	MODIFIER	HG02027.hp2 HG02615.hp2 HG02622.hp2 others(2): Show HG02027.hp2 HG02615.hp2 HG02622.hp2 HG03579.hp1 NA18945.hp2	a0001 a0004 a0006 others(2): Show a0001 a0004 a0006 a0016 a0021	a0001c0001 a0004c0044 a0006c0042 others(2): Show a0001c0001 a0004c0044 a0006c0042 a0016c0043 a0021c0038	a0001c0001t0001 a0004c0044t0001 a0006c0042t0001 others(2): Show a0001c0001t0001 a0004c0044t0001 a0006c0042t0001 a0016c0043t0004 a0021c0038t0004	a0001c0001t0001g0003 a0004c0044t0001g0088 a0006c0042t0001g0047 others(2): Show a0001c0001t0001g0003 a0004c0044t0001g0088 a0006c0042t0001g0047 a0016c0043t0004g0058 a0021c0038t0004g0007	5	94	0.0532	9	c.109 others(28): Show c.1099-3690_1099-3682dupATTATTATT	PCDH15	ENSG00000150275.20	transcript	ENST00000320301.11	protein_coding	10/32			chr10	TogoVar
PCDH15_chr10_53816099_54806231	54247881	A A	AAAAATAT others(2): Show AAAAATATAT	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG02486.hp2 HG03471.hp2 others(1): Show HG02145.hp1 HG02486.hp2 HG03471.hp2 HG03579.hp2	a0005 a0018 a0020 others(1): Show a0005 a0018 a0020 a0022	a0005c0009 a0018c0034 a0020c0037 others(1): Show a0005c0009 a0018c0034 a0020c0037 a0022c0039	a0005c0009t0002 a0018c0034t0003 a0020c0037t0001 others(1): Show a0005c0009t0002 a0018c0034t0003 a0020c0037t0001 a0022c0039t0001	a0005c0009t0002g0070 a0018c0034t0003g0013 a0020c0037t0001g0091 others(1): Show a0005c0009t0002g0070 a0018c0034t0003g0013 a0020c0037t0001g0091 a0022c0039t0001g0093	4	94	0.0426	9	c.877 others(28): Show c.877-10951_877-10950insATATATTTT	PCDH15	ENSG00000150275.20	transcript	ENST00000320301.11	protein_coding	8/32			chr10	TogoVar
PCDH15_chr10_53816099_54806231	54250077	C C	CTATTTTT others(2): Show CTATTTTTTT	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG01069.hp2 HG02145.hp2 others(3): Show HG00735.hp1 HG01069.hp2 HG02145.hp2 HG02965.hp1 HG03139.hp2 NA19240.hp1	a0003 a0010 a0014 others(1): Show a0003 a0010 a0014 a0033	a0003c0003 a0003c0025 a0010c0010 others(2): Show a0003c0003 a0003c0025 a0010c0010 a0014c0012 a0033c0022	a0003c0003t0001 a0003c0003t0002 a0003c0025t0001 others(3): Show a0003c0003t0001 a0003c0003t0002 a0003c0025t0001 a0010c0010t0003 a0014c0012t0001 a0033c0022t0001	a0003c0003t0001g0017 a0003c0003t0002g0080 a0003c0025t0001g0018 others(3): Show a0003c0003t0001g0017 a0003c0003t0002g0080 a0003c0025t0001g0018 a0010c0010t0003g0061 a0014c0012t0001g0008 a0033c0022t0001g0004	6	94	0.0638	9	c.877 others(28): Show c.877-13147_877-13146insAAAAAAATA	PCDH15	ENSG00000150275.20	transcript	ENST00000320301.11	protein_coding	8/32			chr10	TogoVar
PCDH15_chr10_53816099_54806231	54301112	C C	CTTTGTCT others(2): Show CTTTGTCTTA	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG00738.hp2 HG01069.hp1 others(5): Show HG00642.hp1 HG00738.hp2 HG01069.hp1 HG01081.hp2 HG01175.hp1 HG01261.hp2 HG02965.hp2 homoSapiens_chm13v2.hp1	a0001 a0004 a0007 others(2): Show a0001 a0004 a0007 a0008 a0024	a0001c0001 a0004c0004 a0007c0019 others(2): Show a0001c0001 a0004c0004 a0007c0019 a0008c0016 a0024c0040	a0001c0001t0001 a0004c0004t0001 a0007c0019t0001 others(2): Show a0001c0001t0001 a0004c0004t0001 a0007c0019t0001 a0008c0016t0001 a0024c0040t0001	a0001c0001t0001g0036 a0001c0001t0001g0062 a0001c0001t0001g0064 others(5): Show a0001c0001t0001g0036 a0001c0001t0001g0062 a0001c0001t0001g0064 a0004c0004t0001g0022 a0004c0004t0001g0048 a0007c0019t0001g0045 a0008c0016t0001g0012 a0024c0040t0001g0092	8	94	0.0851	9	c.876 others(28): Show c.876+16158_876+16159insTAAGACAAA	PCDH15	ENSG00000150275.20	transcript	ENST00000320301.11	protein_coding	8/32			chr10	TogoVar
PCDH15_chr10_53816099_54806231	54380711	T T	TATATGCT others(2): Show TATATGCTCC	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG00735.hp2 HG01069.hp1 others(17): Show HG00642.hp1 HG00735.hp2 HG01069.hp1 HG01081.hp2 HG01175.hp1 HG01175.hp2 HG01243.hp2 HG01261.hp2 HG01934.hp2 HG01981.hp2 HG02027.hp1 HG02965.hp2 HG03041.hp2 HG03710.hp2 HG06807.hp2 NA18945.hp1 NA19088.hp1 NA20129.hp2 NA20905.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(8): Show a0001 a0002 a0003 a0004 a0005 a0006 a0007 a0008 a0009 a0024 a0029	a0001c0001 a0002c0002 a0002c0006 others(12): Show a0001c0001 a0002c0002 a0002c0006 a0003c0003 a0003c0005 a0003c0024 a0004c0004 a0005c0036 a0006c0008 a0007c0019 a0008c0016 a0009c0013 a0009c0014 a0024c0040 a0029c0030	a0001c0001t0001 a0002c0002t0001 a0002c0006t0001 others(12): Show a0001c0001t0001 a0002c0002t0001 a0002c0006t0001 a0003c0003t0001 a0003c0005t0001 a0003c0024t0001 a0004c0004t0001 a0005c0036t0001 a0006c0008t0001 a0007c0019t0001 a0008c0016t0001 a0009c0013t0001 a0009c0014t0001 a0024c0040t0001 a0029c0030t0001	a0001c0001t0001g0015 a0001c0001t0001g0041 a0001c0001t0001g0062 others(17): Show a0001c0001t0001g0015 a0001c0001t0001g0041 a0001c0001t0001g0062 a0001c0001t0001g0064 a0002c0002t0001g0034 a0002c0006t0001g0059 a0003c0003t0001g0054 a0003c0003t0001g0084 a0003c0005t0001g0075 a0003c0024t0001g0049 a0004c0004t0001g0022 a0004c0004t0001g0048 a0005c0036t0001g0077 a0006c0008t0001g0053 a0007c0019t0001g0045 a0008c0016t0001g0012 a0009c0013t0001g0011 a0009c0014t0001g0069 a0024c0040t0001g0092 a0029c0030t0001g0035	20	94	0.2128	9	c.158 others(26): Show c.158-1770_158-1769insGGAGCATAT	PCDH15	ENSG00000150275.20	transcript	ENST00000320301.11	protein_coding	3/32			chr10	TogoVar
PCDH15_chr10_53816099_54806231	54462496	T T	TTTTCTTT others(2): Show TTTTCTTTTC	intron_variant intron_variant	MODIFIER	HG02486.hp1 HG02922.hp2 HG03139.hp1 HG02486.hp1 HG02922.hp2 HG03139.hp1	a0002 a0013 a0030 a0002 a0013 a0030	a0002c0002 a0013c0017 a0030c0028 a0002c0002 a0013c0017 a0030c0028	a0002c0002t0002 a0013c0017t0001 a0030c0028t0001 a0002c0002t0002 a0013c0017t0001 a0030c0028t0001	a0002c0002t0002g0019 a0013c0017t0001g0026 a0030c0028t0001g0044 a0002c0002t0002g0019 a0013c0017t0001g0026 a0030c0028t0001g0044	3	94	0.0319	9	c.157 others(28): Show c.157+65315_157+65316insGAAAAGAAA	PCDH15	ENSG00000150275.20	transcript	ENST00000320301.11	protein_coding	3/32			chr10	TogoVar
PCDH15_chr10_53816099_54806231	54630109	C C	CCATGCTC others(2): Show CCATGCTCAT	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG03098.hp1 HG06807.hp1 others(1): Show HG01243.hp2 HG03098.hp1 HG06807.hp1 NA18945.hp2	a0002 a0003 a0006 a0002 a0003 a0006	a0002c0002 a0002c0029 a0003c0005 others(1): Show a0002c0002 a0002c0029 a0003c0005 a0006c0042	a0002c0002t0002 a0002c0029t0001 a0003c0005t0001 others(1): Show a0002c0002t0002 a0002c0029t0001 a0003c0005t0001 a0006c0042t0001	a0002c0002t0002g0071 a0002c0029t0001g0024 a0003c0005t0001g0075 others(1): Show a0002c0002t0002g0071 a0002c0029t0001g0024 a0003c0005t0001g0075 a0006c0042t0001g0047	4	94	0.0426	9	c.91+ others(26): Show c.91+34054_91+34062dupATGAGCATG	PCDH15	ENSG00000150275.20	transcript	ENST00000320301.11	protein_coding	2/32			chr10	TogoVar
PCDH19_chrX_100286644_100415273	100313735	C C	CCTGGATG others(2): Show CCTGGATGGG	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG02257.hp2 HG02630.hp2 others(2): Show HG01243.hp1 HG02257.hp2 HG02630.hp2 HG02976.hp1 HG03195.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0031 a0001c0001t0011 a0001c0001t0031	a0001c0001t0011g0114 a0001c0001t0011g0129 a0001c0001t0011g0140 others(2): Show a0001c0001t0011g0114 a0001c0001t0011g0129 a0001c0001t0011g0140 a0001c0001t0011g0141 a0001c0001t0031g0139	5	281	0.0178	9	c.284 others(30): Show c.2849-16869_2849-16861dupCCCATCCAG	PCDH19	ENSG00000165194.15	transcript	ENST00000373034.8	protein_coding	5/5			chrX	TogoVar
PCDH19_chrX_100286644_100415273	100379347	A A	ACACACAC others(2): Show ACACACACAC	intron_variant intron_variant	MODIFIER	HG02056.hp1 HG02083.hp1 NA18939.hp2 others(4): Show HG02056.hp1 HG02083.hp1 NA18939.hp2 NA18945.hp1 NA18957.hp1 NA19006.hp1 NA19084.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0012 a0001c0001 a0003c0012	a0001c0001t0001 a0001c0001t0020 a0001c0001t0047 others(1): Show a0001c0001t0001 a0001c0001t0020 a0001c0001t0047 a0003c0012t0048	a0001c0001t0001g0222 a0001c0001t0001g0227 a0001c0001t0001g0247 others(4): Show a0001c0001t0001g0222 a0001c0001t0001g0227 a0001c0001t0001g0247 a0001c0001t0001g0251 a0001c0001t0020g0157 a0001c0001t0047g0248 a0003c0012t0048g0259	7	281	0.0249	9	c.261 others(30): Show c.2616+23176_2616+23177insGTGTGTGTG	PCDH19	ENSG00000165194.15	transcript	ENST00000373034.8	protein_coding	3/5			chrX	TogoVar
PCDH19_chrX_100286644_100415273	100393536	A A	ACACACAC others(2): Show ACACACACAC	intron_variant intron_variant	MODIFIER	HG02074.hp1 HG02155.hp1 HG02886.hp2 others(2): Show HG02074.hp1 HG02155.hp1 HG02886.hp2 NA18979.hp2 NA18985.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0004c0011 a0001c0001 a0004c0011	a0001c0001t0001 a0001c0001t0023 a0004c0011t0014 a0001c0001t0001 a0001c0001t0023 a0004c0011t0014	a0001c0001t0001g0186 a0001c0001t0001g0187 a0001c0001t0001g0188 others(2): Show a0001c0001t0001g0186 a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0023g0268 a0004c0011t0014g0168	5	281	0.0178	9	c.261 others(28): Show c.2616+8987_2616+8988insGTGTGTGTG	PCDH19	ENSG00000165194.15	transcript	ENST00000373034.8	protein_coding	3/5			chrX	TogoVar
PCDH19_chrX_100286644_100415273	100409709	T T	TCCGCCGC others(2): Show TCCGCCGCCG	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00099.hp2 HG00741.hp2 HG01069.hp1 others(8): Show HG00099.hp2 HG00741.hp2 HG01069.hp1 HG01071.hp1 HG01106.hp1 HG01361.hp2 HG01515.hp1 HG01517.hp2 HG02738.hp1 NA20805.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0001 a0001c0001t0006g0269 a0001c0001t0006g0270 others(7): Show a0001c0001t0006g0001 a0001c0001t0006g0269 a0001c0001t0006g0270 a0001c0001t0006g0271 a0001c0001t0006g0272 a0001c0001t0006g0273 a0001c0001t0006g0274 a0001c0001t0006g0275 a0001c0001t0006g0276 a0001c0001t0006g0277	11	281	0.0392	9	c.-11 others(20): Show c.-1121_-1113dupCGGCGGCGG	PCDH19	ENSG00000165194.15	transcript	ENST00000373034.8	protein_coding	1/6	1113		chrX	TogoVar
PCDH7_chr4_30715369_31151800	30716893	A A	AAGCAGCA others(2): Show AAGCAGCAGC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00558.hp2 HG02040.hp1 HG02083.hp1 others(4): Show HG00558.hp2 HG02040.hp1 HG02083.hp1 HG02155.hp1 HG03453.hp1 NA18948.hp2 NA18982.hp1	a0001 a0001	a0001c0001 a0001c0008 a0001c0001 a0001c0008	a0001c0001t0005 a0001c0001t0008 a0001c0001t0014 others(2): Show a0001c0001t0005 a0001c0001t0008 a0001c0001t0014 a0001c0001t0025 a0001c0008t0010	a0001c0001t0005g0034 a0001c0001t0005g0035 a0001c0001t0008g0037 others(4): Show a0001c0001t0005g0034 a0001c0001t0005g0035 a0001c0001t0008g0037 a0001c0001t0008g0044 a0001c0001t0014g0038 a0001c0001t0025g0036 a0001c0008t0010g0017	7	214	0.0327	9	c.-45 others(20): Show c.-4530_-4529insAGCAGCAGC	PCDH7	ENSG00000169851.16	transcript	ENST00000695919.1	protein_coding		3475		chr4	TogoVar
PCDH7_chr4_30715369_31151800	30894490	A A	ATATATAT others(2): Show ATATATATAT	intron_variant intron_variant	MODIFIER	HG00609.hp1 HG02698.hp2 HG00609.hp1 HG02698.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0028 a0001c0001t0008 a0001c0001t0028	a0001c0001t0008g0025 a0001c0001t0028g0023 a0001c0001t0008g0025 a0001c0001t0028g0023	2	214	0.0094	9	c.317 others(30): Show c.3175-25663_3175-25662insTATATATAT	PCDH7	ENSG00000169851.16	transcript	ENST00000695919.1	protein_coding	1/2			chr4	TogoVar
PCDH7_chr4_30715369_31151800	30896889	C C	CTTTTTTT others(2): Show CTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG00621.hp1 HG00738.hp2 others(15): Show HG00558.hp1 HG00621.hp1 HG00738.hp2 HG01123.hp2 HG01192.hp2 HG01975.hp2 HG02040.hp2 HG02074.hp1 HG02083.hp2 HG02486.hp1 HG02523.hp2 NA18612.hp1 NA18949.hp2 NA18950.hp1 NA18966.hp1 NA18968.hp2 NA18989.hp2 NA19074.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0001c0002 a0003c0009 a0001c0001 a0001c0002 a0003c0009	a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 others(8): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0001c0002t0004 a0001c0002t0006 a0001c0002t0009 a0001c0002t0040 a0003c0009t0006	a0001c0001t0001g0191 a0001c0001t0002g0050 a0001c0001t0006g0088 others(15): Show a0001c0001t0001g0191 a0001c0001t0002g0050 a0001c0001t0006g0088 a0001c0002t0001g0150 a0001c0002t0001g0155 a0001c0002t0001g0158 a0001c0002t0002g0137 a0001c0002t0002g0138 a0001c0002t0002g0144 a0001c0002t0002g0151 a0001c0002t0003g0122 a0001c0002t0003g0139 a0001c0002t0003g0165 a0001c0002t0004g0159 a0001c0002t0006g0161 a0001c0002t0009g0156 a0001c0002t0040g0145 a0003c0009t0006g0125	18	214	0.0841	9	c.317 others(30): Show c.3175-23239_3175-23231dupTTTTTTTTT	PCDH7	ENSG00000169851.16	transcript	ENST00000695919.1	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr4	TogoVar
PCDH7_chr4_30715369_31151800	31097638	A A	ATATAAAA others(2): Show ATATAAAATC	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG01975.hp1 HG02040.hp2 others(6): Show HG00741.hp2 HG01975.hp1 HG02040.hp2 HG02698.hp2 HG03041.hp2 HG03195.hp2 HG03579.hp1 NA18945.hp1 NA18953.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0013 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0013 a0001c0001t0028 a0001c0002t0001	a0001c0001t0001g0011 a0001c0001t0001g0109 a0001c0001t0001g0172 others(6): Show a0001c0001t0001g0011 a0001c0001t0001g0109 a0001c0001t0001g0172 a0001c0001t0002g0116 a0001c0001t0013g0179 a0001c0001t0013g0201 a0001c0001t0028g0023 a0001c0002t0001g0127 a0001c0002t0001g0158	9	214	0.0421	9	c.339 others(30): Show c.3392-44835_3392-44834insTATAAAATC	PCDH7	ENSG00000169851.16	transcript	ENST00000695919.1	protein_coding	2/2			chr4	TogoVar
PCDH7_chr4_30715369_31151800	31150351	T T	TAATATTT others(2): Show TAATATTTCA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01891.hp1 NA19030.hp2 HG01891.hp1 NA19030.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0012 a0001c0003t0012	a0001c0003t0012g0003 a0001c0003t0012g0004 a0001c0003t0012g0003 a0001c0003t0012g0004	2	214	0.0094	9	c.75 others(20): Show c.7502_*7503insAATATTTCA	PCDH7	ENSG00000169851.16	transcript	ENST00000695919.1	protein_coding		3552		chr4	TogoVar
PCDH9_chr13_66297834_67235336	66481251	T T	TATGTAAC others(2): Show TATGTAACAA	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG00735.hp1 HG00735.hp2 others(26): Show HG00438.hp1 HG00735.hp1 HG00735.hp2 HG00741.hp1 HG01109.hp1 HG01167.hp1 HG01175.hp2 HG01261.hp2 HG01496.hp2 HG01978.hp2 HG02165.hp1 HG02622.hp1 HG02622.hp2 HG02738.hp2 HG02970.hp2 HG03041.hp1 HG03098.hp1 HG03195.hp1 HG03209.hp1 HG03209.hp2 HG03239.hp1 HG03471.hp2 HG03579.hp1 HG03927.hp1 HG04204.hp1 HG06807.hp1 NA18950.hp1 NA19030.hp1 NA19060.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0007	a0001c0001 a0001c0002 a0001c0003 others(8): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0006 a0001c0007 a0001c0011 a0001c0014 a0002c0005 a0003c0010 a0007c0008	a0001c0001t0001 a0001c0001t0003 a0001c0001t0008 others(19): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0008 a0001c0001t0013 a0001c0001t0015 a0001c0001t0016 a0001c0001t0017 a0001c0002t0002 a0001c0002t0004 a0001c0002t0009 a0001c0003t0001 a0001c0003t0003 a0001c0004t0001 a0001c0004t0011 a0001c0006t0001 a0001c0006t0003 a0001c0007t0003 a0001c0011t0007 a0001c0014t0004 a0002c0005t0002 a0003c0010t0007 a0007c0008t0005	a0001c0001t0001g0053 a0001c0001t0001g0066 a0001c0001t0001g0074 others(26): Show a0001c0001t0001g0053 a0001c0001t0001g0066 a0001c0001t0001g0074 a0001c0001t0003g0054 a0001c0001t0003g0056 a0001c0001t0003g0070 a0001c0001t0008g0078 a0001c0001t0008g0079 a0001c0001t0013g0069 a0001c0001t0015g0050 a0001c0001t0016g0080 a0001c0001t0017g0077 a0001c0002t0002g0019 a0001c0002t0002g0021 a0001c0002t0004g0022 a0001c0002t0009g0014 a0001c0003t0001g0034 a0001c0003t0003g0032 a0001c0004t0001g0043 a0001c0004t0011g0042 a0001c0006t0001g0027 a0001c0006t0003g0026 a0001c0007t0003g0028 a0001c0007t0003g0029 a0001c0011t0007g0002 a0001c0014t0004g0024 a0002c0005t0002g0006 a0003c0010t0007g0001 a0007c0008t0005g0044	29	80	0.3625	9	c.334 others(32): Show c.3340+149950_3340+149958dupTTGTTACAT	PCDH9	ENSG00000184226.15	transcript	ENST00000377865.7	protein_coding	4/4			chr13	TogoVar
PCDH9_chr13_66297834_67235336	66828810	A A	AAATAATA others(2): Show AAATAATAAT	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG01978.hp2 HG00741.hp1 HG01978.hp2	a0001 a0001	a0001c0006 a0001c0007 a0001c0006 a0001c0007	a0001c0006t0003 a0001c0007t0003 a0001c0006t0003 a0001c0007t0003	a0001c0006t0003g0026 a0001c0007t0003g0029 a0001c0006t0003g0026 a0001c0007t0003g0029	2	80	0.0250	9	c.313 others(30): Show c.3138+74685_3138+74693dupATTATTATT	PCDH9	ENSG00000184226.15	transcript	ENST00000377865.7	protein_coding	3/4			chr13	TogoVar
PCDH9_chr13_66297834_67235336	67120187	A A	AAATAATA others(2): Show AAATAATAAT	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG00438.hp2 HG00735.hp2 others(31): Show HG00438.hp1 HG00438.hp2 HG00735.hp2 HG00741.hp2 HG01109.hp2 HG01167.hp2 HG01261.hp2 HG01496.hp1 HG01884.hp1 HG02132.hp1 HG02165.hp1 HG02165.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02809.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG03041.hp2 HG03195.hp2 HG03209.hp1 HG03239.hp1 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03540.hp2 HG03579.hp2 HG04204.hp2 NA18522.hp2 NA18950.hp2 NA19030.hp2	a0001 a0002 a0004 others(2): Show a0001 a0002 a0004 a0005 a0006	a0001c0001 a0001c0002 a0001c0003 others(7): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0007 a0001c0015 a0002c0005 a0004c0009 a0005c0012 a0006c0016	a0001c0001t0001 a0001c0001t0003 a0001c0001t0006 others(17): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0006 a0001c0001t0008 a0001c0001t0012 a0001c0001t0013 a0001c0001t0017 a0001c0002t0002 a0001c0002t0004 a0001c0003t0001 a0001c0003t0003 a0001c0003t0005 a0001c0004t0006 a0001c0004t0011 a0001c0007t0003 a0001c0015t0001 a0002c0005t0002 a0004c0009t0002 a0005c0012t0004 a0006c0016t0001	a0001c0001t0001g0052 a0001c0001t0001g0060 a0001c0001t0001g0064 others(31): Show a0001c0001t0001g0052 a0001c0001t0001g0060 a0001c0001t0001g0064 a0001c0001t0001g0066 a0001c0001t0001g0068 a0001c0001t0001g0074 a0001c0001t0003g0054 a0001c0001t0003g0059 a0001c0001t0006g0061 a0001c0001t0006g0063 a0001c0001t0008g0078 a0001c0001t0012g0058 a0001c0001t0013g0069 a0001c0001t0017g0077 a0001c0002t0002g0009 a0001c0002t0002g0017 a0001c0002t0002g0023 a0001c0002t0004g0010 a0001c0002t0004g0020 a0001c0002t0004g0022 a0001c0003t0001g0031 a0001c0003t0001g0037 a0001c0003t0001g0038 a0001c0003t0003g0046 a0001c0003t0005g0045 a0001c0004t0006g0040 a0001c0004t0011g0042 a0001c0007t0003g0028 a0001c0015t0001g0048 a0002c0005t0002g0005 a0002c0005t0002g0006 a0004c0009t0002g0003 a0005c0012t0004g0004 a0006c0016t0001g0049	34	80	0.4250	9	c.303 others(32): Show c.3036+105209_3036+105217dupATTATTATT	PCDH9	ENSG00000184226.15	transcript	ENST00000377865.7	protein_coding	2/4			chr13	TogoVar
PCDH9_chr13_66297834_67235336	67122772	C C	CAATAATA others(2): Show CAATAATAAT	intron_variant intron_variant	MODIFIER	NA18522.hp1 NA19043.hp1 NA18522.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0001 a0001c0004t0001 a0001c0001t0001 a0001c0004t0001	a0001c0001t0001g0067 a0001c0004t0001g0041 a0001c0001t0001g0067 a0001c0004t0001g0041	2	80	0.0250	9	c.303 others(32): Show c.3036+102624_3036+102632dupATTATTATT	PCDH9	ENSG00000184226.15	transcript	ENST00000377865.7	protein_coding	2/4			chr13	TogoVar
PCDHA10_chr5_140850897_141017347	140925641	T T	TATAATAA others(2): Show TATAATAATA	intron_variant intron_variant	MODIFIER	HG00621.hp1 HG02145.hp1 HG03491.hp1 others(6): Show HG00621.hp1 HG02145.hp1 HG03491.hp1 HG03516.hp2 HG03540.hp1 HG03579.hp2 HG04199.hp1 NA18962.hp2 NA18975.hp2	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0004 a0015	a0001c0001 a0002c0002 a0003c0011 others(3): Show a0001c0001 a0002c0002 a0003c0011 a0003c0018 a0004c0004 a0015c0024	a0001c0001t0001 a0002c0002t0001 a0002c0002t0002 others(4): Show a0001c0001t0001 a0002c0002t0001 a0002c0002t0002 a0003c0011t0002 a0003c0018t0002 a0004c0004t0001 a0015c0024t0001	a0001c0001t0001g0018 a0001c0001t0001g0202 a0002c0002t0001g0098 others(6): Show a0001c0001t0001g0018 a0001c0001t0001g0202 a0002c0002t0001g0098 a0002c0002t0001g0107 a0002c0002t0002g0087 a0003c0011t0002g0061 a0003c0018t0002g0029 a0004c0004t0001g0004 a0015c0024t0001g0136	9	260	0.0346	9	c.238 others(30): Show c.2389-53279_2389-53271dupTAATAATAA	PCDHA10	ENSG00000250120.8	transcript	ENST00000307360.6	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA11_chr5_140863957_141017347	140925641	T T	TATAATAA others(2): Show TATAATAATA	intron_variant intron_variant	MODIFIER	HG02145.hp2 HG03491.hp2 HG03516.hp1 others(5): Show HG02145.hp2 HG03491.hp2 HG03516.hp1 HG03540.hp1 HG03579.hp1 HG04199.hp2 NA18962.hp2 NA18975.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 a0001c0002t0002	a0001c0001t0001g0070 a0001c0001t0001g0096 a0001c0001t0001g0120 others(5): Show a0001c0001t0001g0070 a0001c0001t0001g0096 a0001c0001t0001g0120 a0001c0001t0002g0112 a0001c0001t0002g0126 a0001c0002t0001g0158 a0001c0002t0001g0226 a0001c0002t0002g0145	8	260	0.0308	9	c.239 others(30): Show c.2392-53279_2392-53271dupTAATAATAA	PCDHA11	ENSG00000249158.7	transcript	ENST00000398640.7	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA12_chr5_140870308_141017347	140925641	T T	TATAATAA others(2): Show TATAATAATA	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG03491.hp2 HG03516.hp1 others(5): Show HG02145.hp1 HG03491.hp2 HG03516.hp1 HG03540.hp1 HG03579.hp2 HG04199.hp2 NA18962.hp1 NA18975.hp1	a0001 a0015 a0001 a0015	a0001c0001 a0001c0002 a0001c0004 others(2): Show a0001c0001 a0001c0002 a0001c0004 a0001c0021 a0015c0011	a0001c0001t0001 a0001c0002t0001 a0001c0004t0002 others(2): Show a0001c0001t0001 a0001c0002t0001 a0001c0004t0002 a0001c0021t0002 a0015c0011t0002	a0001c0001t0001g0072 a0001c0001t0001g0109 a0001c0001t0001g0234 others(5): Show a0001c0001t0001g0072 a0001c0001t0001g0109 a0001c0001t0001g0234 a0001c0002t0001g0127 a0001c0002t0001g0217 a0001c0004t0002g0120 a0001c0021t0002g0110 a0015c0011t0002g0157	8	260	0.0308	9	c.236 others(30): Show c.2367+47831_2367+47839dupTAATAATAA	PCDHA12	ENSG00000251664.5	transcript	ENST00000398631.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA13_chr5_140877124_141017347	140925641	T T	TATAATAA others(2): Show TATAATAATA	intron_variant intron_variant	MODIFIER	HG02145.hp2 HG03491.hp1 HG03516.hp1 others(5): Show HG02145.hp2 HG03491.hp1 HG03516.hp1 HG03540.hp1 HG03579.hp2 HG04199.hp2 NA18962.hp1 NA18975.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0001c0002 a0001c0003 others(1): Show a0001c0001 a0001c0002 a0001c0003 a0003c0019	a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 a0001c0003t0001 a0003c0019t0001	a0001c0001t0001g0118 a0001c0001t0001g0233 a0001c0001t0002g0003 others(5): Show a0001c0001t0001g0118 a0001c0001t0001g0233 a0001c0001t0002g0003 a0001c0001t0002g0119 a0001c0001t0002g0169 a0001c0002t0001g0076 a0001c0003t0001g0127 a0003c0019t0001g0214	8	260	0.0308	9	c.239 others(30): Show c.2394+41008_2394+41016dupTAATAATAA	PCDHA13	ENSG00000239389.8	transcript	ENST00000289272.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA1_chr5_140781140_141017347	140824610	G G	GTTTTTTT others(2): Show GTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01106.hp1 HG02293.hp1 HG02293.hp2 others(3): Show HG01106.hp1 HG02293.hp1 HG02293.hp2 HG02738.hp1 HG03139.hp2 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0009 a0001c0001t0001g0050 a0001c0001t0001g0062 others(3): Show a0001c0001t0001g0009 a0001c0001t0001g0050 a0001c0001t0001g0062 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0067	6	200	0.0300	9	c.239 others(30): Show c.2394+35940_2394+35948dupTTTTTTTTT	PCDHA1	ENSG00000204970.10	transcript	ENST00000504120.4	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA1_chr5_140781140_141017347	140925641	T T	TATAATAA others(2): Show TATAATAATA	intron_variant intron_variant	MODIFIER	HG00621.hp2 HG02145.hp2 HG03491.hp1 others(6): Show HG00621.hp2 HG02145.hp2 HG03491.hp1 HG03516.hp2 HG03540.hp2 HG03579.hp2 HG04199.hp1 NA18962.hp2 NA18975.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0002c0002 a0003c0003 a0001c0001 a0002c0002 a0003c0003	a0001c0001t0001 a0002c0002t0001 a0002c0002t0002 others(1): Show a0001c0001t0001 a0002c0002t0001 a0002c0002t0002 a0003c0003t0002	a0001c0001t0001g0010 a0001c0001t0001g0073 a0002c0002t0001g0111 others(6): Show a0001c0001t0001g0010 a0001c0001t0001g0073 a0002c0002t0001g0111 a0002c0002t0001g0134 a0002c0002t0001g0155 a0002c0002t0001g0160 a0002c0002t0002g0128 a0002c0002t0002g0131 a0003c0003t0002g0194	9	200	0.0450	9	c.239 others(30): Show c.2395-53279_2395-53271dupTAATAATAA	PCDHA1	ENSG00000204970.10	transcript	ENST00000504120.4	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA2_chr5_140789852_141017347	140824610	G G	GTTTTTTT others(2): Show GTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01106.hp1 HG02293.hp1 HG02293.hp2 others(3): Show HG01106.hp1 HG02293.hp1 HG02293.hp2 HG02738.hp1 HG03139.hp1 NA19030.hp2	a0001 a0011 a0001 a0011	a0001c0001 a0011c0010 a0001c0001 a0011c0010	a0001c0001t0001 a0011c0010t0001 a0001c0001t0001 a0011c0010t0001	a0001c0001t0001g0049 a0001c0001t0001g0063 a0001c0001t0001g0086 others(3): Show a0001c0001t0001g0049 a0001c0001t0001g0063 a0001c0001t0001g0086 a0001c0001t0001g0090 a0001c0001t0001g0092 a0011c0010t0001g0098	6	202	0.0297	9	c.238 others(30): Show c.2388+27272_2388+27280dupTTTTTTTTT	PCDHA2	ENSG00000204969.7	transcript	ENST00000526136.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA2_chr5_140789852_141017347	140925641	T T	TATAATAA others(2): Show TATAATAATA	intron_variant intron_variant	MODIFIER	HG00621.hp1 HG02145.hp1 HG03491.hp1 others(6): Show HG00621.hp1 HG02145.hp1 HG03491.hp1 HG03516.hp1 HG03540.hp2 HG03579.hp1 HG04199.hp1 NA18962.hp1 NA18975.hp2	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0002c0002 a0004c0007 a0001c0001 a0002c0002 a0004c0007	a0001c0001t0001 a0002c0002t0001 a0002c0002t0002 others(1): Show a0001c0001t0001 a0002c0002t0001 a0002c0002t0002 a0004c0007t0002	a0001c0001t0001g0005 a0001c0001t0001g0101 a0002c0002t0001g0120 others(6): Show a0001c0001t0001g0005 a0001c0001t0001g0101 a0002c0002t0001g0120 a0002c0002t0001g0146 a0002c0002t0001g0169 a0002c0002t0001g0175 a0002c0002t0002g0140 a0002c0002t0002g0143 a0004c0007t0002g0202	9	202	0.0446	9	c.238 others(30): Show c.2389-53279_2389-53271dupTAATAATAA	PCDHA2	ENSG00000204969.7	transcript	ENST00000526136.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA3_chr5_140796057_141017347	140824610	G G	GTTTTTTT others(2): Show GTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01106.hp1 HG02293.hp1 HG02293.hp2 others(3): Show HG01106.hp1 HG02293.hp1 HG02293.hp2 HG02738.hp1 HG03139.hp2 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0013 a0001c0001 a0001c0013	a0001c0001t0001 a0001c0013t0001 a0001c0001t0001 a0001c0013t0001	a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0009 others(3): Show a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0009 a0001c0001t0001g0018 a0001c0001t0001g0075 a0001c0013t0001g0103	6	208	0.0289	9	c.239 others(30): Show c.2394+21033_2394+21041dupTTTTTTTTT	PCDHA3	ENSG00000255408.4	transcript	ENST00000522353.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA3_chr5_140796057_141017347	140925641	T T	TATAATAA others(2): Show TATAATAATA	intron_variant intron_variant	MODIFIER	HG00621.hp1 HG02145.hp1 HG03491.hp1 others(6): Show HG00621.hp1 HG02145.hp1 HG03491.hp1 HG03516.hp1 HG03540.hp2 HG03579.hp2 HG04199.hp1 NA18962.hp1 NA18975.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0001 a0002c0002 a0003c0004 others(1): Show a0001c0001 a0002c0002 a0003c0004 a0004c0003	a0001c0001t0001 a0002c0002t0002 a0002c0002t0004 others(2): Show a0001c0001t0001 a0002c0002t0002 a0002c0002t0004 a0003c0004t0006 a0004c0003t0002	a0001c0001t0001g0022 a0001c0001t0001g0024 a0002c0002t0002g0139 others(6): Show a0001c0001t0001g0022 a0001c0001t0001g0024 a0002c0002t0002g0139 a0002c0002t0002g0170 a0002c0002t0002g0176 a0002c0002t0004g0129 a0002c0002t0004g0133 a0003c0004t0006g0207 a0004c0003t0002g0125	9	208	0.0433	9	c.239 others(30): Show c.2395-53279_2395-53271dupTAATAATAA	PCDHA3	ENSG00000255408.4	transcript	ENST00000522353.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA4_chr5_140802068_141017347	140824610	G G	GTTTTTTT others(2): Show GTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01106.hp2 HG02293.hp1 HG02293.hp2 others(3): Show HG01106.hp2 HG02293.hp1 HG02293.hp2 HG02738.hp1 HG03139.hp2 NA19030.hp2	a0002 a0003 a0002 a0003	a0002c0002 a0003c0003 a0002c0002 a0003c0003	a0002c0002t0001 a0003c0003t0001 a0002c0002t0001 a0003c0003t0001	a0002c0002t0001g0028 a0002c0002t0001g0078 a0003c0003t0001g0004 others(3): Show a0002c0002t0001g0028 a0002c0002t0001g0078 a0003c0003t0001g0004 a0003c0003t0001g0079 a0003c0003t0001g0080 a0003c0003t0001g0081	6	212	0.0283	9	c.238 others(30): Show c.2385+15052_2385+15060dupTTTTTTTTT	PCDHA4	ENSG00000204967.13	transcript	ENST00000530339.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA4_chr5_140802068_141017347	140925641	T T	TATAATAA others(2): Show TATAATAATA	intron_variant intron_variant	MODIFIER	HG00621.hp2 HG02145.hp2 HG03491.hp1 others(6): Show HG00621.hp2 HG02145.hp2 HG03491.hp1 HG03516.hp2 HG03540.hp2 HG03579.hp2 HG04199.hp1 NA18962.hp2 NA18975.hp1	a0001 a0003 a0004 others(1): Show a0001 a0003 a0004 a0005	a0001c0001 a0003c0003 a0004c0004 others(1): Show a0001c0001 a0003c0003 a0004c0004 a0005c0005	a0001c0001t0002 a0001c0001t0004 a0003c0003t0001 others(2): Show a0001c0001t0002 a0001c0001t0004 a0003c0003t0001 a0004c0004t0006 a0005c0005t0001	a0001c0001t0002g0128 a0001c0001t0002g0142 a0001c0001t0002g0178 others(6): Show a0001c0001t0002g0128 a0001c0001t0002g0142 a0001c0001t0002g0178 a0001c0001t0002g0186 a0001c0001t0004g0132 a0001c0001t0004g0136 a0003c0003t0001g0094 a0004c0004t0006g0106 a0005c0005t0001g0089	9	212	0.0425	9	c.238 others(30): Show c.2386-53279_2386-53271dupTAATAATAA	PCDHA4	ENSG00000204967.13	transcript	ENST00000530339.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA5_chr5_140816613_141017347	140824610	G G	GTTTTTTT others(2): Show GTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01106.hp1 HG02293.hp1 HG02293.hp2 others(2): Show HG01106.hp1 HG02293.hp1 HG02293.hp2 HG02738.hp2 HG03139.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0192 a0001c0001t0001g0193 a0001c0001t0001g0194 others(2): Show a0001c0001t0001g0192 a0001c0001t0001g0193 a0001c0001t0001g0194 a0001c0001t0001g0195 a0001c0001t0001g0196	5	220	0.0227	9	c.235 others(26): Show c.2352+497_2352+505dupTTTTTTTTT	PCDHA5	ENSG00000204965.9	transcript	ENST00000529859.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA5_chr5_140816613_141017347	140925641	T T	TATAATAA others(2): Show TATAATAATA	intron_variant intron_variant	MODIFIER	HG00621.hp1 HG02145.hp1 HG03491.hp1 others(6): Show HG00621.hp1 HG02145.hp1 HG03491.hp1 HG03516.hp2 HG03540.hp1 HG03579.hp2 HG04199.hp2 NA18962.hp2 NA18975.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0002c0002 a0003c0004 a0001c0001 a0002c0002 a0003c0004	a0001c0001t0001 a0002c0002t0002 a0002c0002t0004 others(1): Show a0001c0001t0001 a0002c0002t0002 a0002c0002t0004 a0003c0004t0013	a0001c0001t0001g0199 a0001c0001t0001g0216 a0002c0002t0002g0025 others(6): Show a0001c0001t0001g0199 a0001c0001t0001g0216 a0002c0002t0002g0025 a0002c0002t0002g0026 a0002c0002t0002g0087 a0002c0002t0002g0107 a0002c0002t0004g0011 a0002c0002t0004g0018 a0003c0004t0013g0056	9	220	0.0409	9	c.235 others(30): Show c.2353-53279_2353-53271dupTAATAATAA	PCDHA5	ENSG00000204965.9	transcript	ENST00000529859.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA6_chr5_140822960_141017347	140824610	G G	GTTTTTTT others(2): Show GTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01106.hp2 HG02293.hp1 HG02293.hp2 others(2): Show HG01106.hp2 HG02293.hp1 HG02293.hp2 HG02738.hp1 HG03139.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0045 a0001c0001t0001g0076 a0001c0001t0001g0087 others(2): Show a0001c0001t0001g0045 a0001c0001t0001g0076 a0001c0001t0001g0087 a0001c0001t0001g0089 a0001c0001t0001g0109	5	236	0.0212	9	c.-34 others(20): Show c.-3482_-3481insTTTTTTTTT	PCDHA6	ENSG00000081842.18	transcript	ENST00000529310.6	protein_coding		3349		chr5	TogoVar
PCDHA6_chr5_140822960_141017347	140925641	T T	TATAATAA others(2): Show TATAATAATA	intron_variant intron_variant	MODIFIER	HG00621.hp1 HG02145.hp1 HG03491.hp2 others(6): Show HG00621.hp1 HG02145.hp1 HG03491.hp2 HG03516.hp2 HG03540.hp2 HG03579.hp2 HG04199.hp1 NA18962.hp2 NA18975.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0001c0002 a0003c0004 a0001c0001 a0001c0002 a0003c0004	a0001c0001t0001 a0001c0002t0001 a0001c0002t0002 others(1): Show a0001c0001t0001 a0001c0002t0001 a0001c0002t0002 a0003c0004t0002	a0001c0001t0001g0032 a0001c0001t0001g0047 a0001c0002t0001g0176 others(6): Show a0001c0001t0001g0032 a0001c0001t0001g0047 a0001c0002t0001g0176 a0001c0002t0001g0183 a0001c0002t0001g0210 a0001c0002t0001g0219 a0001c0002t0002g0149 a0001c0002t0002g0161 a0003c0004t0002g0009	9	236	0.0381	9	c.239 others(30): Show c.2395-53279_2395-53271dupTAATAATAA	PCDHA6	ENSG00000081842.18	transcript	ENST00000529310.6	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar

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