view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SCAPER_chr15_76342904_76910340 | 76497109 | C | CTTTTTTT others(2): Show |
intron_variant | MODIFIER | HG01516.hp2 HG02602.hp1 HG03041.hp1 others(3): Show |
a0001 | a0001c0001a0001c0005 | a0001c0001t0001a0001c0005t0001 | a0001c0001t0001g0007 a0001c0001t0001g0034 a0001c0001t0001g0085 others(3): Show |
6 | 77 | 0.0779 | 9 | c.295 others(28): Show |
SCAPER | ENSG00000140386.13 | transcript | ENST00000563290.6 | protein_coding | 24/31 | chr15 | TogoVar | |||||||
SCAPER_chr15_76342904_76910340 | 76813227 | T | TAAAAAAA others(2): Show |
intron_variant | MODIFIER | HG00621.hp1 HG01123.hp1 HG01167.hp2 others(20): Show |
a0001a0003a0010 | a0001c0001a0001c0004a0001c0010others(2): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(4): Show | a0001c0001t0001g0138 a0001c0001t0003g0116 a0001c0001t0003g0136 others(20): Show |
23 | 249 | 0.0924 | 9 | c.394 others(26): Show |
SCAPER | ENSG00000140386.13 | transcript | ENST00000563290.6 | protein_coding | 5/31 | chr15 | TogoVar | |||||||
SCARA5_chr8_27864883_27997673 | 27919241 | G | GGAGGAGG others(2): Show |
intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(283): Show |
a0001a0002a0003others(9): Show | a0001c0001a0001c0002a0001c0003others(30): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(124): Show | a0001c0001t0001g0001 a0001c0001t0001g0146 a0001c0001t0001g0148 others(282): Show |
286 | 293 | 0.9761 | 9 | c.916 others(26): Show |
SCARA5 | ENSG00000168079.17 | transcript | ENST00000354914.8 | protein_coding | 4/8 | chr8 | TogoVar | |||||||
SCARA5_chr8_27864883_27997673 | 27936592 | T | TAAAAAAA others(2): Show |
intron_variant | MODIFIER | HG02280.hp2 HG02451.hp2 HG02572.hp2 others(4): Show |
a0001a0003a0005 | a0001c0003a0001c0007a0003c0011others(1): Show | a0001c0003t0001a0001c0003t0002a0001c0003t0009others(4): Show | a0001c0003t0001g0255 a0001c0003t0002g0030 a0001c0003t0009g0014 others(4): Show |
7 | 33 | 0.2121 | 9 | c.242 others(28): Show |
SCARA5 | ENSG00000168079.17 | transcript | ENST00000354914.8 | protein_coding | 3/8 | chr8 | TogoVar | |||||||
SCARA5_chr8_27864883_27997673 | 27941800 | C | CATTATTA others(2): Show |
intron_variant | MODIFIER | HG00639.hp2 HG01081.hp2 HG01109.hp1 others(7): Show |
a0001a0002 | a0001c0001a0001c0003a0001c0007others(3): Show | a0001c0001t0001a0001c0003t0001a0001c0003t0012others(5): Show | a0001c0001t0001g0241 a0001c0003t0001g0261 a0001c0003t0012g0167 others(7): Show |
10 | 70 | 0.1429 | 9 | c.242 others(28): Show |
SCARA5 | ENSG00000168079.17 | transcript | ENST00000354914.8 | protein_coding | 3/8 | chr8 | TogoVar | |||||||
SCARB1_chr12_124771856_124868864 | 124790009 | C | CAAAAAAA others(2): Show |
intron_variant | MODIFIER | HG00408.hp1 HG00438.hp1 HG00673.hp2 others(20): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(8): Show | a0001c0001t0001g0111 a0001c0001t0003g0038 a0001c0001t0003g0117 others(20): Show |
23 | 240 | 0.0958 | 9 | c.120 others(28): Show |
SCARB1 | ENSG00000073060.17 | transcript | ENST00000261693.11 | protein_coding | 9/12 | chr12 | TogoVar | |||||||
SCARB2_chr4_76153737_76218824 | 76189474 | C | CTGTTGTT others(2): Show |
intron_variant | MODIFIER | HG00280.hp1 HG01515.hp1 HG01517.hp2 others(15): Show |
a0001a0003 | a0001c0001a0001c0002a0001c0008others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(6): Show | a0001c0001t0001g0012 a0001c0001t0001g0030 a0001c0001t0001g0138 others(12): Show |
18 | 62 | 0.2903 | 9 | c.275 others(26): Show |
SCARB2 | ENSG00000138760.11 | transcript | ENST00000264896.8 | protein_coding | 2/11 | chr4 | TogoVar | |||||||
SCCPDH_chr1_246719409_246773137 | 246722565 | T | TTTTTGTT others(2): Show |
upstream_gene_variant | MODIFIER | HG00438.hp1 HG00621.hp2 HG00673.hp2 others(71): Show |
a0001a0004 | a0001c0001a0001c0002a0001c0005others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0007others(5): Show | a0001c0001t0001g0052 a0001c0001t0001g0054 a0001c0001t0001g0260 others(49): Show |
74 | 300 | 0.2467 | 9 | c.-18 others(20): Show |
SCCPDH | ENSG00000143653.10 | transcript | ENST00000366510.4 | protein_coding | 1843 | chr1 | TogoVar | |||||||
SCD5_chr4_82624539_82803796 | 82702130 | C | CTTTTTTT others(2): Show |
intron_variant | MODIFIER | HG01167.hp1 HG01496.hp2 HG01515.hp2 others(17): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(2): Show | a0001c0001t0001g0020 a0001c0001t0001g0028 a0001c0001t0001g0152 others(17): Show |
20 | 26 | 0.7692 | 9 | c.363 others(26): Show |
SCD5 | ENSG00000145284.12 | transcript | ENST00000319540.9 | protein_coding | 2/4 | chr4 | TogoVar | |||||||
SCD5_chr4_82624539_82803796 | 82720441 | T | TACAAAAA others(2): Show |
intron_variant | MODIFIER | HG00558.hp1 HG00642.hp2 HG00738.hp2 others(34): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(10): Show | a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0021 others(34): Show |
37 | 86 | 0.4302 | 9 | c.233 others(28): Show |
SCD5 | ENSG00000145284.12 | transcript | ENST00000319540.9 | protein_coding | 1/4 | chr4 | TogoVar | |||||||
SCEL_chr13_77530706_77650263 | 77633442 | C | CAAAAAAA others(2): Show |
intron_variant | MODIFIER | HG00099.hp2 HG00408.hp2 HG00558.hp1 others(27): Show |
a0001a0002a0014 | a0001c0004a0002c0001a0014c0021 | a0001c0004t0001a0002c0001t0001a0002c0001t0007others(1): Show | a0001c0004t0001g0024 a0001c0004t0001g0038 a0001c0004t0001g0243 others(27): Show |
30 | 131 | 0.2290 | 9 | c.169 others(26): Show |
SCEL | ENSG00000136155.17 | transcript | ENST00000349847.4 | protein_coding | 28/32 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | ||||||
SCFD2_chr4_52867982_53371061 | 53370409 | C | CCTTTTTT others(2): Show |
upstream_gene_variant | MODIFIER | HG02109.hp1 HG02258.hp1 HG02647.hp1 others(6): Show |
a0001 | a0001c0001a0001c0003a0001c0004 | a0001c0001t0001a0001c0001t0002a0001c0001t0010others(3): Show | a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0077 others(6): Show |
9 | 30 | 0.3000 | 9 | c.-44 others(20): Show |
SCFD2 | ENSG00000184178.17 | transcript | ENST00000401642.8 | protein_coding | 4349 | chr4 | TogoVar | |||||||
SCG5_chr15_32636710_32702092 | 32688958 | C | CAAAAAAA others(2): Show |
intron_variant | MODIFIER | HG00099.hp2 HG01081.hp1 HG01516.hp2 others(7): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0005a0001c0002t0003 | a0001c0001t0001g0108 a0001c0001t0001g0157 a0001c0001t0001g0194 others(7): Show |
10 | 293 | 0.0341 | 9 | c.490 others(26): Show |
SCG5 | ENSG00000166922.9 | transcript | ENST00000300175.9 | protein_coding | 4/5 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
SCGB1D1_chr11_62185216_62198539 | 62196439 | A | AATTATTA others(2): Show |
downstream_gene_variant | MODIFIER | HG01243.hp1 HG01243.hp2 HG01261.hp2 others(13): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0006 others(3): Show |
16 | 52 | 0.3077 | 9 | c.*30 others(20): Show |
SCGB1D1 | ENSG00000168515.3 | transcript | ENST00000306238.3 | protein_coding | 2901 | chr11 | TogoVar | |||||||
SCGB1D1_chr11_62185216_62198539 | 62196449 | A | ATTATTAT others(2): Show |
downstream_gene_variant | MODIFIER | HG00735.hp1 HG01070.hp1 HG01074.hp1 others(13): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0007 a0001c0001t0001g0035 |
16 | 422 | 0.0379 | 9 | c.*30 others(20): Show |
SCGB1D1 | ENSG00000168515.3 | transcript | ENST00000306238.3 | protein_coding | 2911 | chr11 | TogoVar | |||||||
SCGB2A1_chr11_62203673_62218943 | 62213106 | A | ATATATAT others(2): Show |
intron_variant | MODIFIER | HG00621.hp1 HG00673.hp2 HG03710.hp1 others(15): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0004 others(6): Show |
18 | 65 | 0.2769 | 9 | c.244 others(24): Show |
SCGB2A1 | ENSG00000124939.6 | transcript | ENST00000244930.6 | protein_coding | 2/2 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
SCGB2A2_chr11_62265158_62278160 | 62272042 | T | TAAAAAAA others(2): Show |
intron_variant | MODIFIER | HG00099.hp2 HG00280.hp1 HG00438.hp1 others(111): Show |
a0001a0004 | a0001c0001a0001c0002a0004c0005 | a0001c0001t0001a0001c0002t0001a0004c0005t0003 | a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0016 others(8): Show |
114 | 172 | 0.6628 | 9 | c.244 others(24): Show |
SCGB2A2 | ENSG00000110484.7 | transcript | ENST00000227918.3 | protein_coding | 2/2 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
SCIN_chr7_12565720_12665182 | 12578909 | G | GTTTTTTT others(2): Show |
intron_variant | MODIFIER | HG00099.hp2 HG00544.hp2 HG00558.hp2 others(23): Show |
a0002a0011a0013 | a0002c0002a0002c0003a0002c0010others(2): Show | a0002c0002t0001a0002c0002t0002a0002c0002t0004others(19): Show | a0002c0002t0001g0258 a0002c0002t0001g0260 a0002c0002t0001g0268 others(23): Show |
26 | 191 | 0.1361 | 9 | c.354 others(24): Show |
SCIN | ENSG00000006747.15 | transcript | ENST00000297029.10 | protein_coding | 2/15 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
SCIN_chr7_12565720_12665182 | 12657572 | A | ATATATAT others(2): Show |
3_prime_UTR_variant | MODIFIER | HG00408.hp1 HG00597.hp2 HG04184.hp1 others(3): Show |
a0001a0002a0006others(1): Show | a0001c0001a0002c0003a0006c0006others(1): Show | a0001c0001t0009a0001c0001t0045a0002c0003t0058others(2): Show | a0001c0001t0009g0056 a0001c0001t0045g0053 a0001c0001t0045g0211 others(3): Show |
6 | 187 | 0.0321 | 9 | c.*48 others(20): Show |
SCIN | ENSG00000006747.15 | transcript | ENST00000297029.10 | protein_coding | 16/16 | 4859 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
SCIN_chr7_12565720_12665182 | 12657573 | T | TATATATA others(2): Show |
3_prime_UTR_variant | MODIFIER | HG02165.hp1 NA18966.hp2 NA19088.hp2 |
a0001a0007 | a0001c0001a0007c0008 | a0001c0001t0018a0007c0008t0147 | a0001c0001t0018g0110 a0001c0001t0018g0187 a0007c0008t0147g0156 |
3 | 341 | 0.0088 | 9 | c.*48 others(20): Show |
SCIN | ENSG00000006747.15 | transcript | ENST00000297029.10 | protein_coding | 16/16 | 4859 | chr7 | TogoVar | ||||||
SCLY_chr2_238056001_238104413 | 238065660 | T | TTTATTAT others(2): Show |
intron_variant | MODIFIER | HG00099.hp1 HG00140.hp2 HG00323.hp2 others(109): Show |
a0001a0002a0003others(3): Show | a0001c0001a0001c0003a0001c0010others(5): Show | a0001c0001t0004a0001c0001t0005a0001c0001t0007others(66): Show | a0001c0001t0004g0009 a0001c0001t0004g0056 a0001c0001t0004g0089 others(94): Show |
112 | 149 | 0.7517 | 9 | c.202 others(26): Show |
SCLY | ENSG00000132330.18 | transcript | ENST00000254663.12 | protein_coding | 2/11 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SCMH1_chr1_41022202_41247306 | 41089787 | C | CTTTTTTT others(2): Show |
intron_variant | MODIFIER | HG00280.hp1 HG00609.hp1 HG01358.hp1 others(13): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0008 | a0001c0001t0001g0140 a0001c0001t0001g0199 a0001c0001t0001g0200 others(13): Show |
16 | 74 | 0.2162 | 9 | c.746 others(28): Show |
SCMH1 | ENSG00000010803.17 | transcript | ENST00000695335.1 | protein_coding | 8/15 | chr1 | TogoVar | |||||||
SCMH1_chr1_41022202_41247306 | 41244447 | C | CTTTTTTT others(2): Show |
upstream_gene_variant | MODIFIER | HG00099.hp2 HG00140.hp2 HG00735.hp1 others(23): Show |
a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0107 a0001c0001t0003g0109 a0001c0001t0003g0110 others(23): Show |
26 | 185 | 0.1405 | 9 | c.-25 others(20): Show |
SCMH1 | ENSG00000010803.17 | transcript | ENST00000695335.1 | protein_coding | 2142 | chr1 | TogoVar | |||||||
SCML4_chr6_107697154_107829313 | 107802689 | C | CTCTCCCT others(2): Show |
intron_variant | MODIFIER | HG03041.hp2 HG03453.hp1 HG03471.hp1 others(7): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(3): Show | a0001c0001t0003a0001c0001t0013a0001c0002t0001others(4): Show | a0001c0001t0003g0013 a0001c0001t0003g0041 a0001c0001t0013g0073 others(7): Show |
10 | 191 | 0.0524 | 9 | c.-60 others(28): Show |
SCML4 | ENSG00000146285.15 | transcript | ENST00000369020.8 | protein_coding | 1/7 | chr6 | TogoVar | |||||||
SCML4_chr6_107697154_107829313 | 107817620 | C | CAAAAAAA others(2): Show |
intron_variant | MODIFIER | HG01167.hp1 HG01169.hp1 HG01891.hp1 others(8): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0001a0001c0002t0001a0001c0002t0029others(2): Show | a0001c0001t0001g0150 a0001c0001t0001g0151 a0001c0001t0001g0159 others(8): Show |
11 | 146 | 0.0753 | 9 | c.-60 others(26): Show |
SCML4 | ENSG00000146285.15 | transcript | ENST00000369020.8 | protein_coding | 1/7 | chr6 | TogoVar | |||||||
SCN1A_chr2_165980813_166133020 | 166118298 | G | GCTTCTTT others(2): Show |
intron_variant | MODIFIER | HG00408.hp2 HG00544.hp1 HG01123.hp1 others(16): Show |
a0001a0002 | a0001c0001a0001c0006a0001c0008others(1): Show | a0001c0001t0002a0001c0001t0009a0001c0001t0012others(6): Show | a0001c0001t0002g0019 a0001c0001t0002g0029 a0001c0001t0002g0042 others(16): Show |
19 | 266 | 0.0714 | 9 | c.-14 others(28): Show |
SCN1A | ENSG00000144285.23 | transcript | ENST00000674923.1 | protein_coding | 2/28 | chr2 | TogoVar | |||||||
SCN1B_chr19_35025470_35045449 | 35036732 | C | CTATTATT others(2): Show |
intron_variant | MODIFIER | HG00639.hp2 HG01070.hp2 HG01884.hp2 others(7): Show |
a0001a0002 | a0001c0001a0001c0003a0001c0009others(1): Show | a0001c0001t0001a0001c0001t0004a0001c0003t0010others(2): Show | a0001c0001t0001g0020 a0001c0001t0001g0102 a0001c0001t0001g0107 others(4): Show |
10 | 267 | 0.0375 | 9 | c.449 others(26): Show |
SCN1B | ENSG00000105711.14 | transcript | ENST00000262631.11 | protein_coding | 3/5 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | ||||||
SCN2A_chr2_165234414_165397304 | 165291405 | T | TCCCTGTC others(2): Show |
intron_variant | MODIFIER | HG02132.hp2 HG03669.hp1 NA18612.hp1 |
a0001 | a0001c0002a0001c0017 | a0001c0002t0001a0001c0017t0001 | a0001c0002t0001g0013 a0001c0002t0001g0014 a0001c0017t0001g0196 |
3 | 356 | 0.0084 | 9 | c.-51 others(26): Show |
SCN2A | ENSG00000136531.19 | transcript | ENST00000375437.7 | protein_coding | 1/26 | chr2 | TogoVar | |||||||
SCN2A_chr2_165234414_165397304 | 165291491 | T | TTTCTTTT others(2): Show |
intron_variant | MODIFIER | HG01070.hp1 HG01346.hp1 HG01928.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0178 a0001c0001t0002g0189 a0001c0001t0002g0216 others(3): Show |
6 | 212 | 0.0283 | 9 | c.-51 others(26): Show |
SCN2A | ENSG00000136531.19 | transcript | ENST00000375437.7 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SCN2A_chr2_165234414_165397304 | 165392742 | C | CAAAAAAA others(2): Show |
downstream_gene_variant | MODIFIER | HG00099.hp1 HG00408.hp2 HG00438.hp2 others(49): Show |
a0001a0005 | a0001c0001a0001c0016a0005c0011 | a0001c0001t0002a0001c0001t0007a0001c0001t0010others(4): Show | a0001c0001t0002g0002 a0001c0001t0002g0026 a0001c0001t0002g0076 others(48): Show |
52 | 143 | 0.3636 | 9 | c.*29 others(20): Show |
SCN2A | ENSG00000136531.19 | transcript | ENST00000375437.7 | protein_coding | 439 | chr2 | TogoVar | |||||||
SCN2B_chr11_118157806_118181639 | 118174091 | C | CTTTTGTT others(2): Show |
intron_variant | MODIFIER | HG01361.hp2 HG01891.hp1 HG02015.hp1 others(13): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0005a0001c0001t0006others(3): Show | a0001c0001t0001g0012 a0001c0001t0001g0178 a0001c0001t0001g0179 others(8): Show |
16 | 162 | 0.0988 | 9 | c.70+ others(24): Show |
SCN2B | ENSG00000149575.9 | transcript | ENST00000278947.6 | protein_coding | 1/3 | chr11 | TogoVar | |||||||
SCN3A_chr2_165082526_165209050 | 165142723 | G | GTGTTGTT others(2): Show |
intron_variant | MODIFIER | HG01361.hp2 HG02145.hp2 NA18953.hp2 others(5): Show |
a0001 | a0001c0002 | a0001c0002t0001a0001c0002t0003 | a0001c0002t0001g0151 a0001c0002t0001g0168 a0001c0002t0001g0184 others(5): Show |
8 | 84 | 0.0952 | 9 | c.167 others(28): Show |
SCN3A | ENSG00000153253.20 | transcript | ENST00000283254.12 | protein_coding | 12/27 | chr2 | TogoVar | |||||||
SCN3A_chr2_165082526_165209050 | 165153987 | A | ATTTTTTT others(2): Show |
intron_variant | MODIFIER | HG00438.hp1 HG00558.hp1 HG00642.hp1 others(32): Show |
a0001a0005a0008 | a0001c0001a0001c0003a0001c0005others(4): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(7): Show | a0001c0001t0001g0005 a0001c0001t0001g0082 a0001c0001t0001g0083 others(31): Show |
35 | 108 | 0.3241 | 9 | c.138 others(26): Show |
SCN3A | ENSG00000153253.20 | transcript | ENST00000283254.12 | protein_coding | 11/27 | chr2 | TogoVar | |||||||
SCN8A_chr12_51586233_51817864 | 51679721 | C | CTTTTTTT others(2): Show |
intron_variant | MODIFIER | HG01099.hp2 HG01109.hp1 HG02056.hp1 others(4): Show |
a0001 | a0001c0001a0001c0016 | a0001c0001t0002a0001c0001t0003a0001c0001t0004others(2): Show | a0001c0001t0002g0024 a0001c0001t0002g0099 a0001c0001t0003g0029 others(4): Show |
7 | 51 | 0.1373 | 9 | c.277 others(26): Show |
SCN8A | ENSG00000196876.19 | transcript | ENST00000354534.11 | protein_coding | 2/26 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
SCN8A_chr12_51586233_51817864 | 51813933 | T | TTAACGTT others(2): Show |
downstream_gene_variant | MODIFIER | HG02258.hp1 HG02258.hp2 HG02486.hp1 others(2): Show |
a0001 | a0001c0008a0001c0009a0001c0010others(1): Show | a0001c0008t0001a0001c0009t0024a0001c0010t0001others(1): Show | a0001c0008t0001g0147 a0001c0008t0001g0149 a0001c0009t0024g0112 others(2): Show |
5 | 200 | 0.0250 | 9 | c.*65 others(20): Show |
SCN8A | ENSG00000196876.19 | transcript | ENST00000354534.11 | protein_coding | 1070 | chr12 | TogoVar | |||||||
SCN9A_chr2_166190185_166380944 | 166199975 | G | GTTTTTTT others(2): Show |
intron_variant | MODIFIER | HG01081.hp1 HG01891.hp1 HG02109.hp1 others(4): Show |
a0001a0004 | a0001c0001a0001c0002a0001c0003others(4): Show | a0001c0001t0001a0001c0002t0001a0001c0003t0001others(4): Show | a0001c0001t0001g0052 a0001c0002t0001g0280 a0001c0003t0001g0279 others(4): Show |
7 | 26 | 0.2692 | 9 | c.477 others(26): Show |
SCN9A | ENSG00000169432.19 | transcript | ENST00000642356.2 | protein_coding | 26/26 | chr2 | TogoVar | |||||||
SCN9A_chr2_166190185_166380944 | 166207428 | T | TTTGTTGT others(2): Show |
intron_variant | MODIFIER | HG03041.hp2 HG03225.hp1 HG03453.hp2 others(4): Show |
a0001a0015a0023 | a0001c0003a0001c0004a0001c0063others(3): Show | a0001c0003t0001a0001c0003t0002a0001c0004t0001others(4): Show | a0001c0003t0001g0219 a0001c0003t0002g0079 a0001c0004t0001g0137 others(4): Show |
7 | 51 | 0.1373 | 9 | c.439 others(28): Show |
SCN9A | ENSG00000169432.19 | transcript | ENST00000642356.2 | protein_coding | 24/26 | chr2 | TogoVar | |||||||
SCN9A_chr2_166190185_166380944 | 166213459 | C | CAATAATA others(2): Show |
intron_variant | MODIFIER | HG00558.hp2 HG00609.hp1 HG00609.hp2 others(40): Show |
a0001a0003a0004others(5): Show | a0001c0001a0001c0002a0001c0003others(16): Show | a0001c0001t0001a0001c0001t0002a0001c0002t0001others(24): Show | a0001c0001t0001g0071 a0001c0001t0001g0143 a0001c0001t0002g0038 others(40): Show |
43 | 153 | 0.2810 | 9 | c.439 others(28): Show |
SCN9A | ENSG00000169432.19 | transcript | ENST00000642356.2 | protein_coding | 24/26 | chr2 | TogoVar | |||||||
SCN9A_chr2_166190185_166380944 | 166370220 | A | AATCATCA others(2): Show |
intron_variant | MODIFIER | HG01255.hp2 HG02922.hp2 HG03516.hp2 others(4): Show |
a0001a0002a0007 | a0001c0003a0001c0005a0001c0011others(4): Show | a0001c0003t0001a0001c0005t0001a0001c0011t0009others(4): Show | a0001c0003t0001g0278 a0001c0005t0001g0026 a0001c0011t0009g0027 others(4): Show |
7 | 214 | 0.0327 | 9 | c.-51 others(26): Show |
SCN9A | ENSG00000169432.19 | transcript | ENST00000642356.2 | protein_coding | 1/26 | chr2 | TogoVar | |||||||
SCN9A_chr2_166190185_166380944 | 166370223 | A | AATCATCA others(2): Show |
intron_variant | MODIFIER | HG01243.hp2 HG02004.hp2 HG02129.hp1 others(3): Show |
a0001a0002a0007others(1): Show | a0001c0002a0001c0003a0002c0009others(2): Show | a0001c0002t0028a0001c0003t0001a0001c0003t0002others(3): Show | a0001c0002t0028g0253 a0001c0003t0001g0279 a0001c0003t0002g0284 others(3): Show |
6 | 182 | 0.0330 | 9 | c.-51 others(26): Show |
SCN9A | ENSG00000169432.19 | transcript | ENST00000642356.2 | protein_coding | 1/26 | chr2 | TogoVar | |||||||
SCN9A_chr2_166190185_166380944 | 166370226 | A | AATCATCA others(2): Show |
intron_variant | MODIFIER | HG00738.hp1 HG00741.hp2 HG01099.hp2 others(2): Show |
a0001a0002a0015 | a0001c0002a0001c0003a0002c0009others(1): Show | a0001c0002t0001a0001c0003t0001a0002c0009t0004others(1): Show | a0001c0002t0001g0196 a0001c0003t0001g0254 a0001c0003t0001g0286 others(2): Show |
5 | 128 | 0.0391 | 9 | c.-51 others(26): Show |
SCN9A | ENSG00000169432.19 | transcript | ENST00000642356.2 | protein_coding | 1/26 | chr2 | TogoVar | |||||||
SCN9A_chr2_166190185_166380944 | 166370229 | A | AATCATCA others(2): Show |
intron_variant | MODIFIER | HG03041.hp1 HG03130.hp2 HG03471.hp1 others(4): Show |
a0001a0004a0007others(1): Show | a0001c0002a0001c0003a0004c0024others(2): Show | a0001c0002t0001a0001c0003t0010a0004c0024t0002others(3): Show | a0001c0002t0001g0201 a0001c0003t0010g0003 a0004c0024t0002g0193 others(4): Show |
7 | 63 | 0.1111 | 9 | c.-51 others(26): Show |
SCN9A | ENSG00000169432.19 | transcript | ENST00000642356.2 | protein_coding | 1/26 | chr2 | TogoVar | |||||||
SCNN1B_chr16_23297302_23386294 | 23301359 | C | CAAAAAAA others(2): Show |
upstream_gene_variant | MODIFIER | HG01109.hp1 HG01884.hp1 HG02280.hp1 others(4): Show |
a0001a0002a0003 | a0001c0001a0002c0004a0003c0005 | a0001c0001t0001a0002c0004t0001a0003c0005t0001 | a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0070 others(4): Show |
7 | 139 | 0.0504 | 9 | c.-10 others(20): Show |
SCNN1B | ENSG00000168447.11 | transcript | ENST00000343070.7 | protein_coding | 942 | chr16 | TogoVar | |||||||
SCNN1B_chr16_23297302_23386294 | 23374268 | G | GAAAAAAA others(2): Show |
intron_variant | MODIFIER | HG00544.hp2 HG00639.hp2 HG00735.hp1 others(24): Show |
a0001a0002 | a0001c0001a0001c0002a0002c0004 | a0001c0001t0001a0001c0002t0001a0002c0004t0001 | a0001c0001t0001g0002 a0001c0001t0001g0007 a0001c0001t0001g0009 others(24): Show |
27 | 109 | 0.2477 | 9 | c.115 others(28): Show |
SCNN1B | ENSG00000168447.11 | transcript | ENST00000343070.7 | protein_coding | 7/12 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SCP2_chr1_52922276_53056698 | 52934592 | C | CTTTTTTT others(2): Show |
intron_variant | MODIFIER | HG02148.hp1 HG02630.hp2 HG03516.hp1 others(4): Show |
a0001 | a0001c0001a0001c0003a0001c0004others(1): Show | a0001c0001t0001a0001c0001t0003a0001c0003t0001others(2): Show | a0001c0001t0001g0042 a0001c0001t0001g0220 a0001c0001t0003g0247 others(4): Show |
7 | 21 | 0.3333 | 9 | c.69+ others(24): Show |
SCP2 | ENSG00000116171.19 | transcript | ENST00000371514.8 | protein_coding | 1/15 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SCP2_chr1_52922276_53056698 | 52999815 | G | GTTTTTTT others(2): Show |
intron_variant | MODIFIER | HG02559.hp2 HG02886.hp2 HG02895.hp1 others(3): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0003a0001c0002t0003 | a0001c0001t0003g0185 a0001c0001t0003g0187 a0001c0001t0003g0188 others(3): Show |
6 | 119 | 0.0504 | 9 | c.108 others(30): Show |
SCP2 | ENSG00000116171.19 | transcript | ENST00000371514.8 | protein_coding | 11/15 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SCP2_chr1_52922276_53056698 | 53037922 | A | ACACACAC others(2): Show |
intron_variant | MODIFIER | HG01243.hp1 HG02896.hp1 HG03927.hp2 others(3): Show |
a0001 | a0001c0003a0001c0004 | a0001c0003t0001a0001c0003t0004a0001c0004t0004 | a0001c0003t0001g0005 a0001c0003t0001g0008 a0001c0003t0001g0009 others(3): Show |
6 | 244 | 0.0246 | 9 | c.133 others(26): Show |
SCP2 | ENSG00000116171.19 | transcript | ENST00000371514.8 | protein_coding | 13/15 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SCTR_chr2_119434843_119529483 | 119523392 | C | CTATTATT others(2): Show |
intron_variant | MODIFIER | HG02451.hp2 HG02602.hp1 HG02723.hp1 others(4): Show |
a0001a0012 | a0001c0001a0012c0014 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(1): Show | a0001c0001t0001g0138 a0001c0001t0001g0270 a0001c0001t0002g0126 others(4): Show |
7 | 140 | 0.0500 | 9 | c.72+ others(22): Show |
SCTR | ENSG00000080293.10 | transcript | ENST00000019103.8 | protein_coding | 1/12 | chr2 | TogoVar | |||||||
SCUBE1_chr22_43192280_43348372 | 43273561 | C | CTTTTTTT others(2): Show |
intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00741.hp1 others(13): Show |
a0001a0002a0003others(1): Show | a0001c0003a0001c0004a0001c0008others(7): Show | a0001c0003t0003a0001c0003t0006a0001c0004t0037others(8): Show | a0001c0003t0003g0085 a0001c0003t0003g0140 a0001c0003t0006g0159 others(13): Show |
16 | 60 | 0.2667 | 9 | c.485 others(28): Show |
SCUBE1 | ENSG00000159307.20 | transcript | ENST00000360835.9 | protein_coding | 4/21 | chr22 | TogoVar | |||||||
SCUBE2_chr11_9014476_9096599 | 9090489 | A | ATTTATTT others(2): Show |
intron_variant | MODIFIER | HG01069.hp2 HG01071.hp1 HG01255.hp2 others(26): Show |
a0001a0002a0004others(2): Show | a0001c0002a0001c0005a0002c0001others(3): Show | a0001c0002t0001a0001c0002t0002a0001c0002t0010others(10): Show | a0001c0002t0001g0027 a0001c0002t0001g0032 a0001c0002t0002g0026 others(25): Show |
29 | 267 | 0.1086 | 9 | c.134 others(24): Show |
SCUBE2 | ENSG00000175356.14 | transcript | ENST00000649792.2 | protein_coding | 1/22 | chr11 | TogoVar |