Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	external
CSRNP3_chr2_165464698_165694407	165480782	T T	TATATATA others(2): Show TATATATATA	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00408.hp1 HG00544.hp2 others(73): Show HG00280.hp2 HG00408.hp1 HG00544.hp2 HG00609.hp1 HG00673.hp1 HG01081.hp2 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01167.hp2 HG01255.hp1 HG01257.hp1 HG01258.hp2 HG01261.hp2 HG01346.hp2 HG01358.hp1 HG01978.hp2 HG01993.hp2 HG02040.hp1 HG02056.hp1 HG02071.hp2 HG02083.hp1 HG02132.hp1 HG02145.hp2 HG02257.hp1 HG02451.hp1 HG02523.hp1 HG02615.hp2 HG02622.hp2 HG02723.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02965.hp2 HG03017.hp2 HG03098.hp1 HG03130.hp2 HG03139.hp1 HG03195.hp1 HG03195.hp2 HG03239.hp1 HG03669.hp1 HG03831.hp2 HG03927.hp2 HG04228.hp2 NA18906.hp2 NA18942.hp1 NA18948.hp1 NA18951.hp2 NA18954.hp2 NA18956.hp1 NA18959.hp2 NA18961.hp2 NA18972.hp2 NA18974.hp2 NA18983.hp1 NA18984.hp1 NA18985.hp1 NA18986.hp2 NA18992.hp2 NA18999.hp2 NA19000.hp2 NA19003.hp1 NA19003.hp2 NA19005.hp2 NA19006.hp2 NA19009.hp2 NA19010.hp2 NA19043.hp2 NA19066.hp1 NA19075.hp2 NA19080.hp2 NA19082.hp1 NA19085.hp2 NA19087.hp2 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0004 a0001c0001 a0001c0002 a0001c0004	a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 others(36): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0007 a0001c0001t0011 a0001c0001t0015 a0001c0001t0018 a0001c0001t0020 a0001c0001t0024 a0001c0001t0044 a0001c0001t0051 a0001c0001t0052 a0001c0001t0054 a0001c0001t0057 a0001c0001t0059 a0001c0001t0060 a0001c0001t0065 a0001c0001t0069 a0001c0001t0076 a0001c0001t0084 a0001c0001t0092 a0001c0002t0001 a0001c0002t0005 a0001c0002t0006 a0001c0002t0008 a0001c0002t0017 a0001c0002t0019 a0001c0002t0021 a0001c0002t0038 a0001c0002t0039 a0001c0002t0042 a0001c0002t0043 a0001c0002t0045 a0001c0002t0086 a0001c0002t0093 a0001c0004t0016 a0001c0004t0073 a0001c0004t0088 a0001c0004t0089	a0001c0001t0002g0003 a0001c0001t0002g0007 a0001c0001t0002g0008 others(73): Show a0001c0001t0002g0003 a0001c0001t0002g0007 a0001c0001t0002g0008 a0001c0001t0002g0011 a0001c0001t0002g0016 a0001c0001t0002g0023 a0001c0001t0002g0045 a0001c0001t0002g0047 a0001c0001t0003g0002 a0001c0001t0003g0012 a0001c0001t0003g0050 a0001c0001t0003g0052 a0001c0001t0003g0053 a0001c0001t0003g0054 a0001c0001t0003g0056 a0001c0001t0003g0065 a0001c0001t0004g0017 a0001c0001t0004g0022 a0001c0001t0004g0025 a0001c0001t0007g0048 a0001c0001t0007g0059 a0001c0001t0007g0062 a0001c0001t0011g0051 a0001c0001t0011g0064 a0001c0001t0015g0026 a0001c0001t0015g0089 a0001c0001t0018g0061 a0001c0001t0020g0019 a0001c0001t0020g0088 a0001c0001t0024g0034 a0001c0001t0044g0009 a0001c0001t0051g0046 a0001c0001t0052g0010 a0001c0001t0054g0021 a0001c0001t0057g0028 a0001c0001t0059g0031 a0001c0001t0060g0004 a0001c0001t0065g0013 a0001c0001t0069g0035 a0001c0001t0076g0063 a0001c0001t0084g0014 a0001c0001t0092g0066 a0001c0002t0001g0005 a0001c0002t0001g0006 a0001c0002t0001g0015 a0001c0002t0001g0024 a0001c0002t0001g0086 a0001c0002t0001g0090 a0001c0002t0005g0027 a0001c0002t0005g0029 a0001c0002t0005g0030 a0001c0002t0005g0036 a0001c0002t0005g0042 a0001c0002t0006g0038 a0001c0002t0006g0039 a0001c0002t0006g0040 a0001c0002t0006g0041 a0001c0002t0008g0032 a0001c0002t0008g0044 a0001c0002t0017g0049 a0001c0002t0017g0057 a0001c0002t0019g0018 a0001c0002t0019g0083 a0001c0002t0021g0245 a0001c0002t0038g0060 a0001c0002t0039g0037 a0001c0002t0042g0246 a0001c0002t0043g0033 a0001c0002t0045g0043 a0001c0002t0086g0055 a0001c0002t0093g0082 a0001c0004t0016g0084 a0001c0004t0016g0085 a0001c0004t0073g0244 a0001c0004t0088g0087 a0001c0004t0089g0020	76	246	0.3089	9	c.-28 others(30): Show c.-283+11057_-283+11065dupTATAATATA		CSRNP3	ENSG00000178662.16	transcript	ENST00000651982.1	protein_coding	1/6					INFO_REALIGN_3_PRIME	chr2	TogoVar
CST9L_chr20_23559732_23573484	23570011	G G	GTTTTTTT others(2): Show GTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00408.hp1 HG00438.hp1 HG00735.hp1 others(23): Show HG00408.hp1 HG00438.hp1 HG00735.hp1 HG01074.hp1 HG01256.hp1 HG01256.hp2 HG01261.hp1 HG02027.hp1 HG02040.hp2 HG02738.hp2 HG02886.hp1 HG04228.hp2 NA18977.hp2 NA18979.hp1 NA18981.hp1 NA19000.hp2 NA19004.hp1 NA19005.hp2 NA19007.hp2 NA19010.hp2 NA19012.hp1 NA19060.hp1 NA19079.hp2 NA19086.hp2 NA19087.hp2 NA19090.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0001 a0002c0002t0004 a0001c0001t0001 a0002c0002t0001 a0002c0002t0004	a0001c0001t0001g0002 a0002c0002t0001g0001 a0002c0002t0001g0016 others(5): Show a0001c0001t0001g0002 a0002c0002t0001g0001 a0002c0002t0001g0016 a0002c0002t0001g0028 a0002c0002t0001g0030 a0002c0002t0001g0051 a0002c0002t0001g0053 a0002c0002t0004g0050	26	392	0.0663	9	c.-15 others(20): Show c.-1562_-1561insAAAAAAAAA		CST9L	ENSG00000101435.5	transcript	ENST00000376979.4	protein_coding					1528		chr20	TogoVar
CSTF1_chr20_56387645_56411362	56404812	A A	ATTTTTTT others(2): Show ATTTTTTTTT	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00639.hp1 HG02809.hp2 HG02895.hp1 others(4): Show HG00639.hp1 HG02809.hp2 HG02895.hp1 HG03209.hp2 HG06807.hp2 NA19030.hp1 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0019 a0001c0001t0023 a0001c0001t0076 a0001c0001t0019 a0001c0001t0023 a0001c0001t0076	a0001c0001t0019g0009 a0001c0001t0019g0032 a0001c0001t0023g0005 others(2): Show a0001c0001t0019g0009 a0001c0001t0019g0032 a0001c0001t0023g0005 a0001c0001t0023g0035 a0001c0001t0076g0026	7	422	0.0166	9	c.11 others(20): Show c.1103_*1111dupTTTTTTTTT		CSTF1	ENSG00000101138.12	transcript	ENST00000217109.9	protein_coding	6/6				1112	INFO_REALIGN_3_PRIME	chr20	TogoVar
CSTF3_chr11_33079584_33166480	33150034	A A	AAACAACA others(2): Show AAACAACAAC	intron_variant intron_variant	MODIFIER	NA18965.hp2 NA18966.hp1 NA18986.hp1 others(1): Show NA18965.hp2 NA18966.hp1 NA18986.hp1 NA19091.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0012 a0001c0001t0002g0044 a0001c0001t0002g0076 a0001c0001t0002g0012 a0001c0001t0002g0044 a0001c0001t0002g0076	4	360	0.0111	9	c.28- others(24): Show c.28-8057_28-8049dupGTTGTTGTT		CSTF3	ENSG00000176102.13	transcript	ENST00000323959.9	protein_coding	1/20						chr11	TogoVar
CSTL1_chr20_23434685_23449930	23438628	A A	AGGAGGGA others(2): Show AGGAGGGACC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00280.hp1 others(184): Show HG00099.hp1 HG00099.hp2 HG00280.hp1 HG00280.hp2 HG00323.hp1 HG00323.hp2 HG00408.hp1 HG00423.hp1 HG00544.hp2 HG00558.hp2 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00642.hp2 HG00733.hp1 HG00735.hp1 HG00738.hp1 HG00738.hp2 HG01074.hp1 HG01099.hp2 HG01109.hp1 HG01167.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01192.hp2 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01256.hp1 HG01258.hp1 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01361.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01516.hp2 HG01928.hp2 HG01934.hp2 HG01943.hp1 HG01952.hp1 HG01952.hp2 HG01981.hp2 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02040.hp1 HG02055.hp1 HG02056.hp1 HG02074.hp2 HG02129.hp1 HG02145.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp2 HG02273.hp2 HG02280.hp2 HG02300.hp1 HG02486.hp1 HG02486.hp2 HG02559.hp2 HG02622.hp1 HG02630.hp2 HG02647.hp1 HG02698.hp1 HG02738.hp2 HG02809.hp2 HG02818.hp2 HG02886.hp1 HG02896.hp1 HG02965.hp2 HG02976.hp1 HG02976.hp2 HG03041.hp2 HG03098.hp2 HG03195.hp2 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03471.hp1 HG03486.hp2 HG03491.hp1 HG03492.hp2 HG03669.hp1 HG03927.hp1 HG03942.hp2 HG04204.hp2 HG04228.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18944.hp2 NA18945.hp2 NA18947.hp1 NA18949.hp1 NA18950.hp1 NA18950.hp2 NA18951.hp2 NA18952.hp2 NA18953.hp2 NA18954.hp2 NA18955.hp2 NA18959.hp2 NA18960.hp2 NA18961.hp2 NA18963.hp2 NA18964.hp1 NA18965.hp2 NA18966.hp2 NA18967.hp2 NA18969.hp2 NA18970.hp2 NA18971.hp1 NA18977.hp1 NA18978.hp2 NA18979.hp2 NA18980.hp1 NA18981.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18985.hp1 NA18986.hp2 NA18987.hp1 NA18988.hp1 NA18989.hp1 NA18990.hp2 NA18991.hp2 NA18992.hp1 NA18995.hp1 NA18997.hp1 NA18999.hp1 NA18999.hp2 NA19001.hp1 NA19001.hp2 NA19002.hp1 NA19003.hp1 NA19003.hp2 NA19005.hp2 NA19009.hp1 NA19009.hp2 NA19012.hp2 NA19043.hp1 NA19054.hp1 NA19057.hp1 NA19057.hp2 NA19058.hp1 NA19058.hp2 NA19060.hp1 NA19060.hp2 NA19062.hp2 NA19063.hp2 NA19065.hp2 NA19066.hp1 NA19066.hp2 NA19068.hp1 NA19068.hp2 NA19074.hp2 NA19076.hp1 NA19078.hp1 NA19078.hp2 NA19080.hp2 NA19081.hp2 NA19082.hp1 NA19082.hp2 NA19084.hp2 NA19085.hp1 NA19085.hp2 NA19086.hp2 NA19088.hp2 NA19090.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20805.hp1	a0001 a0002 a0004 others(4): Show a0001 a0002 a0004 a0006 a0007 a0008 a0009	a0001c0001 a0001c0007 a0002c0002 others(6): Show a0001c0001 a0001c0007 a0002c0002 a0004c0005 a0004c0016 a0006c0009 a0007c0008 a0008c0010 a0009c0017	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(9): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 a0001c0007t0001 a0002c0002t0001 a0004c0005t0001 a0004c0016t0001 a0006c0009t0001 a0007c0008t0001 a0008c0010t0001 a0009c0017t0001	a0001c0001t0001g0001 a0001c0001t0001g0014 a0001c0001t0001g0016 others(25): Show a0001c0001t0001g0001 a0001c0001t0001g0014 a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0025 a0001c0001t0001g0027 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0037 a0001c0001t0001g0039 a0001c0001t0001g0047 a0001c0001t0002g0001 a0001c0001t0004g0001 a0001c0001t0005g0001 a0001c0007t0001g0017 a0001c0007t0001g0025 a0001c0007t0001g0061 a0002c0002t0001g0008 a0002c0002t0001g0015 a0002c0002t0001g0042 a0004c0005t0001g0005 a0004c0005t0001g0026 a0004c0016t0001g0043 a0006c0009t0001g0018 a0007c0008t0001g0021 a0007c0008t0001g0041 a0008c0010t0001g0028 a0009c0017t0001g0005	187	452	0.4137	9	c.-13 others(20): Show c.-1303_-1302insGGAGGGACC		CSTL1	ENSG00000125823.13	transcript	ENST00000347397.5	protein_coding					1056		chr20	TogoVar
CSTPP1_chr11_46931761_47167247	47036092	T T	TAATATAT others(2): Show TAATATATTA	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG01099.hp2 HG01358.hp2 others(6): Show HG00738.hp2 HG01099.hp2 HG01358.hp2 HG02055.hp1 HG02572.hp2 HG02723.hp2 HG02895.hp2 HG03130.hp2 HG03486.hp2	a0001 a0005 a0001 a0005	a0001c0001 a0005c0006 a0001c0001 a0005c0006	a0001c0001t0001 a0005c0006t0001 a0001c0001t0001 a0005c0006t0001	a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 others(6): Show a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0091 a0001c0001t0001g0102 a0001c0001t0001g0106 a0001c0001t0001g0167 a0005c0006t0001g0200	9	224	0.0402	9	c.150 others(28): Show c.150-16296_150-16295insAATATATTA		CSTPP1	ENSG00000149179.14	transcript	ENST00000278460.12	protein_coding	2/8						chr11	TogoVar
CSTPP1_chr11_46931761_47167247	47101164	A A	ATTTTTTT others(2): Show ATTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG00438.hp2 HG01192.hp1 others(13): Show HG00438.hp1 HG00438.hp2 HG01192.hp1 HG01243.hp2 HG01981.hp2 HG02004.hp2 HG02300.hp1 HG03654.hp2 HG03710.hp1 NA18906.hp1 NA18960.hp2 NA18964.hp1 NA18978.hp2 NA18992.hp1 NA19083.hp2 NA20300.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0003 a0002c0002t0001 a0001c0001t0001 a0001c0001t0003 a0002c0002t0001	a0001c0001t0001g0047 a0001c0001t0001g0073 a0001c0001t0001g0083 others(13): Show a0001c0001t0001g0047 a0001c0001t0001g0073 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0090 a0001c0001t0001g0107 a0001c0001t0001g0120 a0001c0001t0001g0128 a0001c0001t0001g0135 a0001c0001t0001g0144 a0001c0001t0001g0146 a0001c0001t0003g0097 a0001c0001t0003g0098 a0001c0001t0003g0100 a0002c0002t0001g0086 a0002c0002t0001g0087	16	224	0.0714	9	c.281 others(28): Show c.281-36464_281-36456dupTTTTTTTTT		CSTPP1	ENSG00000149179.14	transcript	ENST00000278460.12	protein_coding	3/8					INFO_REALIGN_3_PRIME	chr11	TogoVar
CSTPP1_chr11_46931761_47167247	47110890	C C	CTTTTTTT others(2): Show CTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01192.hp2 HG02080.hp1 NA18947.hp1 others(4): Show HG01192.hp2 HG02080.hp1 NA18947.hp1 NA18977.hp1 NA18978.hp1 NA18991.hp2 NA19000.hp1	a0001 a0001	a0001c0001 a0001c0007 a0001c0001 a0001c0007	a0001c0001t0001 a0001c0007t0001 a0001c0001t0001 a0001c0007t0001	a0001c0001t0001g0006 a0001c0001t0001g0021 a0001c0001t0001g0049 others(4): Show a0001c0001t0001g0006 a0001c0001t0001g0021 a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0007t0001g0063	7	224	0.0313	9	c.281 others(28): Show c.281-26746_281-26738dupTTTTTTTTT		CSTPP1	ENSG00000149179.14	transcript	ENST00000278460.12	protein_coding	3/8					INFO_REALIGN_3_PRIME	chr11	TogoVar
CSTPP1_chr11_46931761_47167247	47122091	A A	AAATATAT others(2): Show AAATATATAT	intron_variant intron_variant	MODIFIER	HG02080.hp2 HG02698.hp2 HG03516.hp1 others(2): Show HG02080.hp2 HG02698.hp2 HG03516.hp1 NA19000.hp2 NA19010.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0117 others(2): Show a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0117 a0001c0001t0001g0136 a0001c0001t0001g0193	5	224	0.0223	9	c.281 others(28): Show c.281-15553_281-15552insATATATATA		CSTPP1	ENSG00000149179.14	transcript	ENST00000278460.12	protein_coding	3/8					INFO_REALIGN_3_PRIME	chr11	TogoVar
CSTPP1_chr11_46931761_47167247	47122091	A A	ATATATAT others(2): Show ATATATATAT	intron_variant intron_variant	MODIFIER	HG02809.hp2 NA18947.hp2 NA19011.hp1 others(2): Show HG02809.hp2 NA18947.hp2 NA19011.hp1 NA19056.hp1 NA19062.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0082 a0001c0001t0001g0124 a0001c0001t0001g0137 others(2): Show a0001c0001t0001g0082 a0001c0001t0001g0124 a0001c0001t0001g0137 a0001c0001t0001g0152 a0001c0001t0001g0162	5	224	0.0223	9	c.281 others(28): Show c.281-15554_281-15553insTATATATAT		CSTPP1	ENSG00000149179.14	transcript	ENST00000278460.12	protein_coding	3/8						chr11	TogoVar
CT45A3_chrX_135755044_135773191	135759430	T T	TATATATA others(2): Show TATATATATA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02523.hp1 HG02523.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0078 a0002c0002t0001g0078	1	160	0.0063	9	c.92 others(18): Show c.921_*922insTATATATAT		CT45A3	ENSG00000269096.7	transcript	ENST00000598716.3	protein_coding					613		chrX	TogoVar
CT45A7_chrX_135824229_135842280	135838419	A A	AAAAAGAA others(2): Show AAAAAGAAAG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01175.hp1 HG01175.hp1	a0005 a0005	a0005c0005 a0005c0005	a0005c0005t0005 a0005c0005t0005	a0005c0005t0005g0019 a0005c0005t0005g0019	1	19	0.0526	9	c.-13 others(20): Show c.-1385_-1384insCTTTCTTTT		CT45A7	ENSG00000273696.5	transcript	ENST00000610598.5	protein_coding					1140		chrX	TogoVar
CTAG1A_chrX_154580133_154591816	154581768	G G	GAAACTGG others(2): Show GAAACTGGAT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18975.hp2 NA18975.hp2	a0004 a0004	a0004c0015 a0004c0015	a0004c0015t0001 a0004c0015t0001	a0004c0015t0001g0030 a0004c0015t0001g0030	1	293	0.0034	9	c.-34 others(20): Show c.-3439_-3438insAAACTGGAT		CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding					3364		chrX	TogoVar
CTBP2_chr10_124979317_125033071	124996048	G G	GTTTTTTT others(2): Show GTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00609.hp1 HG00673.hp2 HG01175.hp2 others(10): Show HG00609.hp1 HG00673.hp2 HG01175.hp2 HG02055.hp2 HG03098.hp2 HG03710.hp1 NA18949.hp1 NA18970.hp2 NA18984.hp2 NA18990.hp2 NA19060.hp2 NA19066.hp2 NA19067.hp1	a0003 a0004 a0007 others(1): Show a0003 a0004 a0007 a0022	a0003c0004 a0004c0008 a0004c0040 others(3): Show a0003c0004 a0004c0008 a0004c0040 a0004c0047 a0007c0013 a0022c0042	a0003c0004t0082 a0004c0008t0004 a0004c0008t0007 others(8): Show a0003c0004t0082 a0004c0008t0004 a0004c0008t0007 a0004c0008t0044 a0004c0008t0046 a0004c0008t0089 a0004c0008t0107 a0004c0040t0099 a0004c0047t0044 a0007c0013t0104 a0022c0042t0014	a0003c0004t0082g0250 a0004c0008t0004g0343 a0004c0008t0004g0345 others(9): Show a0003c0004t0082g0250 a0004c0008t0004g0343 a0004c0008t0004g0345 a0004c0008t0007g0347 a0004c0008t0044g0342 a0004c0008t0046g0025 a0004c0008t0089g0344 a0004c0008t0107g0341 a0004c0040t0099g0314 a0004c0047t0044g0340 a0007c0013t0104g0317 a0022c0042t0014g0320	13	380	0.0342	9	c.218 others(28): Show c.2186-1374_2186-1366dupAAAAAAAAA		CTBP2	ENSG00000175029.17	transcript	ENST00000309035.11	protein_coding	4/8						chr10	TogoVar
CTBS_chr1_84544611_84579440	84574315	C C	CGCAGCGC others(2): Show CGCAGCGCCA	conservative_inframe_insertion conservative_inframe_insertion	MODERATE	HG00642.hp1 HG01099.hp1 HG02257.hp1 others(5): Show HG00642.hp1 HG01099.hp1 HG02257.hp1 HG02897.hp1 HG03540.hp1 NA18522.hp1 NA19030.hp2 NA20300.hp1	a0004 a0004	a0004c0006 a0004c0006	a0004c0006t0001 a0004c0006t0019 a0004c0006t0001 a0004c0006t0019	a0004c0006t0001g0012 a0004c0006t0001g0103 a0004c0006t0001g0104 others(1): Show a0004c0006t0001g0012 a0004c0006t0001g0103 a0004c0006t0001g0104 a0004c0006t0019g0102	8	340	0.0235	9	c.92_ others(15): Show c.92_100dupTGGCGCTGC	p.Leu others(11): Show p.Leu31_Leu33dup	CTBS	ENSG00000117151.13	transcript	ENST00000370630.6	protein_coding	1/7	125/6571	100/1158	34/385			chr1	TogoVar
CTBS_chr1_84544611_84579440	84574515	G G	GGGGAGGG others(2): Show GGGGAGGGGC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01070.hp1 HG01071.hp1 HG01081.hp2 others(13): Show HG01070.hp1 HG01071.hp1 HG01081.hp2 HG01099.hp2 HG01167.hp1 HG01169.hp2 HG02145.hp2 HG02258.hp1 HG02280.hp1 HG02572.hp1 HG03041.hp1 NA18965.hp2 NA19005.hp1 NA19005.hp2 NA19030.hp1 NA19075.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0002 a0001c0002t0003 a0001c0001t0001 a0001c0002t0002 a0001c0002t0003	a0001c0001t0001g0033 a0001c0001t0001g0069 a0001c0002t0002g0008 others(6): Show a0001c0001t0001g0033 a0001c0001t0001g0069 a0001c0002t0002g0008 a0001c0002t0002g0041 a0001c0002t0002g0115 a0001c0002t0002g0116 a0001c0002t0002g0117 a0001c0002t0003g0042 a0001c0002t0003g0120	16	340	0.0471	9	c.-10 others(18): Show c.-101_-100insGCCCCTCCC		CTBS	ENSG00000117151.13	transcript	ENST00000370630.6	protein_coding					76		chr1	TogoVar
CTC1_chr17_8219815_8253056	8248410	A A	ATTTTTTT others(2): Show ATTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00408.hp2 HG00621.hp2 HG01891.hp2 others(14): Show HG00408.hp2 HG00621.hp2 HG01891.hp2 HG02280.hp2 HG02486.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG03516.hp2 HG03579.hp2 HG03688.hp1 HG04199.hp2 NA18522.hp1 NA18747.hp2 NA18959.hp1 NA18989.hp1 NA20129.hp2	a0001 a0006 a0001 a0006	a0001c0002 a0006c0007 a0001c0002 a0006c0007	a0001c0002t0001 a0001c0002t0003 a0001c0002t0004 others(3): Show a0001c0002t0001 a0001c0002t0003 a0001c0002t0004 a0001c0002t0010 a0001c0002t0018 a0006c0007t0009	a0001c0002t0001g0029 a0001c0002t0001g0130 a0001c0002t0001g0139 others(14): Show a0001c0002t0001g0029 a0001c0002t0001g0130 a0001c0002t0001g0139 a0001c0002t0001g0144 a0001c0002t0003g0030 a0001c0002t0003g0127 a0001c0002t0003g0308 a0001c0002t0004g0128 a0001c0002t0004g0135 a0001c0002t0004g0192 a0001c0002t0004g0208 a0001c0002t0010g0211 a0001c0002t0010g0230 a0001c0002t0010g0262 a0001c0002t0018g0256 a0001c0002t0018g0257 a0006c0007t0009g0119	17	402	0.0423	9	c.-38 others(18): Show c.-383_-375dupAAAAAAAAA		CTC1	ENSG00000178971.17	transcript	ENST00000651323.1	protein_coding					355		chr17	TogoVar
CTCF_chr16_67557526_67644177	67608018	C C	CAAAAAAA others(2): Show CAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG02027.hp1 HG02055.hp1 others(17): Show HG00438.hp2 HG02027.hp1 HG02055.hp1 HG02257.hp2 HG02486.hp2 HG02602.hp2 HG02622.hp1 HG02630.hp2 HG02735.hp1 HG02896.hp2 HG03098.hp2 HG03139.hp1 HG03195.hp1 HG03486.hp1 HG03491.hp1 HG03516.hp2 HG03540.hp1 HG03654.hp2 NA18995.hp2 NA19060.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 others(3): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0007 a0001c0001t0010 a0001c0002t0003	a0001c0001t0002g0146 a0001c0001t0002g0147 a0001c0001t0002g0148 others(17): Show a0001c0001t0002g0146 a0001c0001t0002g0147 a0001c0001t0002g0148 a0001c0001t0002g0150 a0001c0001t0002g0151 a0001c0001t0002g0152 a0001c0001t0002g0153 a0001c0001t0003g0137 a0001c0001t0003g0138 a0001c0001t0003g0139 a0001c0001t0003g0141 a0001c0001t0004g0159 a0001c0001t0004g0160 a0001c0001t0004g0162 a0001c0001t0004g0163 a0001c0001t0004g0164 a0001c0001t0004g0165 a0001c0001t0007g0130 a0001c0001t0010g0166 a0001c0002t0003g0142	20	168	0.1191	9	c.-9- others(24): Show c.-9-2799_-9-2791dupAAAAAAAAA		CTCF	ENSG00000102974.16	transcript	ENST00000264010.10	protein_coding	2/11					INFO_REALIGN_3_PRIME	chr16	TogoVar
CTDSP2_chr12_57814927_57851729	57818182	C C	CTTTTTTT others(2): Show CTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp2 HG00609.hp1 HG00673.hp1 others(20): Show HG00099.hp2 HG00609.hp1 HG00673.hp1 HG01070.hp2 HG01074.hp2 HG01255.hp2 HG02083.hp2 HG02300.hp1 HG03540.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG04204.hp1 NA18948.hp2 NA18954.hp2 NA18957.hp2 NA19009.hp1 NA19012.hp1 NA19063.hp1 NA19075.hp2 NA19084.hp1 NA19087.hp1 NA19090.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0009 a0001c0001t0019 a0001c0001t0001 a0001c0001t0009 a0001c0001t0019	a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0021 others(16): Show a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0021 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0061 a0001c0001t0001g0140 a0001c0001t0001g0141 a0001c0001t0001g0155 a0001c0001t0001g0162 a0001c0001t0001g0170 a0001c0001t0001g0174 a0001c0001t0001g0176 a0001c0001t0001g0189 a0001c0001t0001g0190 a0001c0001t0001g0191 a0001c0001t0001g0192 a0001c0001t0009g0164 a0001c0001t0019g0172	23	346	0.0665	9	c.54 others(20): Show c.5411_*5419dupAAAAAAAAA		CTDSP2	ENSG00000175215.11	transcript	ENST00000398073.7	protein_coding					1744		chr12	TogoVar
CTDSPL2_chr15_44422629_44534038	44439121	A A	ATATTATT others(2): Show ATATTATTAT	intron_variant intron_variant	MODIFIER	HG00735.hp2 NA21309.hp1 HG00735.hp2 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0009 a0001c0001t0003g0019 a0001c0001t0003g0009 a0001c0001t0003g0019	2	234	0.0086	9	c.-25 others(28): Show c.-25+11363_-25+11371dupATTATTATT		CTDSPL2	ENSG00000137770.14	transcript	ENST00000260327.9	protein_coding	1/12					INFO_REALIGN_3_PRIME	chr15	TogoVar
CTDSPL_chr3_37856880_37989469	37939925	C C	CTACTAAA others(2): Show CTACTAAAAA	intron_variant intron_variant	MODIFIER	HG01099.hp1 HG01169.hp2 HG01934.hp2 others(3): Show HG01099.hp1 HG01169.hp2 HG01934.hp2 HG02886.hp2 NA18906.hp1 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0018 a0001c0001t0019 a0001c0001t0007 a0001c0001t0018 a0001c0001t0019	a0001c0001t0007g0064 a0001c0001t0007g0065 a0001c0001t0007g0066 others(3): Show a0001c0001t0007g0064 a0001c0001t0007g0065 a0001c0001t0007g0066 a0001c0001t0007g0067 a0001c0001t0018g0063 a0001c0001t0019g0062	6	166	0.0361	9	c.80- others(24): Show c.80-7128_80-7120dupTAAAAATAC		CTDSPL	ENSG00000144677.15	transcript	ENST00000273179.10	protein_coding	1/7					INFO_REALIGN_3_PRIME	chr3	TogoVar
CTDSPL_chr3_37856880_37989469	37948814	T T	TTTTTTTT others(2): Show TTTTTTTTTC	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG00741.hp2 HG01099.hp2 others(12): Show HG00423.hp2 HG00741.hp2 HG01099.hp2 HG01109.hp2 HG01175.hp2 HG01261.hp1 HG01516.hp1 HG01943.hp1 HG01975.hp2 HG01993.hp2 HG02074.hp1 HG03492.hp1 NA18969.hp1 NA19062.hp2 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0001 a0001c0001t0002 a0001c0004t0002 a0001c0001t0001 a0001c0001t0002 a0001c0004t0002	a0001c0001t0001g0028 a0001c0001t0001g0033 a0001c0001t0001g0042 others(12): Show a0001c0001t0001g0028 a0001c0001t0001g0033 a0001c0001t0001g0042 a0001c0001t0002g0026 a0001c0001t0002g0027 a0001c0001t0002g0032 a0001c0001t0002g0034 a0001c0001t0002g0035 a0001c0001t0002g0036 a0001c0001t0002g0037 a0001c0001t0002g0038 a0001c0001t0002g0040 a0001c0001t0002g0041 a0001c0001t0002g0044 a0001c0004t0002g0158	15	166	0.0904	9	c.234 others(26): Show c.234+1611_234+1612insCTTTTTTTT		CTDSPL	ENSG00000144677.15	transcript	ENST00000273179.10	protein_coding	2/7					INFO_REALIGN_3_PRIME	chr3	TogoVar
CTHRC1_chr8_103366538_103387989	103387256	C C	CAAAAAAA others(2): Show CAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02723.hp2 NA18966.hp1 NA18989.hp1 others(3): Show HG02723.hp2 NA18966.hp1 NA18989.hp1 NA19088.hp2 NA20805.hp2 NA21309.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0002 a0001c0002t0001g0017 a0001c0002t0001g0002 a0001c0002t0001g0017	6	408	0.0147	9	c.46 others(20): Show c.4656_*4657insAAAAAAAAA		CTHRC1	ENSG00000164932.13	transcript	ENST00000330295.10	protein_coding					4268		chr8	TogoVar
CTIF_chr18_48534031_48868217	48554980	A A	AAGTATTC others(2): Show AAGTATTCAG	intron_variant intron_variant	MODIFIER	HG01081.hp1 HG01884.hp1 HG01952.hp1 others(18): Show HG01081.hp1 HG01884.hp1 HG01952.hp1 HG02055.hp1 HG02080.hp1 HG02486.hp2 HG02559.hp1 HG02647.hp1 HG02647.hp2 HG02698.hp2 HG02895.hp2 HG03130.hp1 HG03139.hp2 HG03516.hp1 HG03654.hp1 HG03710.hp1 NA18945.hp1 NA18952.hp1 NA19068.hp1 NA20129.hp2 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(12): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 a0001c0001t0008 a0001c0001t0009 a0001c0001t0011 a0001c0001t0015 a0001c0001t0019 a0001c0001t0021 a0001c0001t0038 a0001c0001t0046 a0001c0001t0050 a0001c0002t0002 a0001c0002t0045	a0001c0001t0001g0036 a0001c0001t0001g0066 a0001c0001t0001g0071 others(18): Show a0001c0001t0001g0036 a0001c0001t0001g0066 a0001c0001t0001g0071 a0001c0001t0002g0068 a0001c0001t0002g0137 a0001c0001t0004g0070 a0001c0001t0004g0134 a0001c0001t0005g0067 a0001c0001t0008g0139 a0001c0001t0008g0142 a0001c0001t0009g0037 a0001c0001t0011g0133 a0001c0001t0011g0143 a0001c0001t0015g0135 a0001c0001t0019g0138 a0001c0001t0021g0141 a0001c0001t0038g0136 a0001c0001t0046g0140 a0001c0001t0050g0124 a0001c0002t0002g0038 a0001c0002t0045g0002	21	144	0.1458	9	c.-29 others(28): Show c.-29+15672_-29+15680dupATTCAGAGT		CTIF	ENSG00000134030.14	transcript	ENST00000256413.8	protein_coding	1/11					INFO_REALIGN_3_PRIME	chr18	TogoVar
CTIF_chr18_48534031_48868217	48645278	C C	CAAAAAAA others(2): Show CAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG00642.hp1 HG00735.hp2 others(30): Show HG00639.hp1 HG00642.hp1 HG00735.hp2 HG01081.hp1 HG01081.hp2 HG01106.hp2 HG01109.hp1 HG01243.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01934.hp1 HG02258.hp1 HG02602.hp1 HG02698.hp2 HG02735.hp1 HG02738.hp1 HG02738.hp2 HG02895.hp1 HG02897.hp1 HG03130.hp2 HG03209.hp1 HG03490.hp2 HG03654.hp2 HG04115.hp1 HG06807.hp1 NA18747.hp1 NA18747.hp2 NA18972.hp1 NA18972.hp2 NA19011.hp1 NA20129.hp1 NA21309.hp1	a0001 a0005 a0006 a0001 a0005 a0006	a0001c0001 a0001c0002 a0001c0003 others(3): Show a0001c0001 a0001c0002 a0001c0003 a0001c0011 a0005c0010 a0006c0006	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(20): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0009 a0001c0001t0012 a0001c0001t0017 a0001c0001t0020 a0001c0001t0022 a0001c0001t0030 a0001c0001t0031 a0001c0001t0033 a0001c0001t0044 a0001c0002t0001 a0001c0002t0034 a0001c0002t0045 a0001c0003t0001 a0001c0003t0007 a0001c0011t0013 a0005c0010t0001 a0006c0006t0001	a0001c0001t0001g0074 a0001c0001t0001g0077 a0001c0001t0001g0089 others(30): Show a0001c0001t0001g0074 a0001c0001t0001g0077 a0001c0001t0001g0089 a0001c0001t0001g0096 a0001c0001t0001g0105 a0001c0001t0001g0120 a0001c0001t0002g0097 a0001c0001t0003g0064 a0001c0001t0003g0098 a0001c0001t0004g0082 a0001c0001t0005g0067 a0001c0001t0006g0021 a0001c0001t0009g0003 a0001c0001t0009g0076 a0001c0001t0012g0091 a0001c0001t0017g0100 a0001c0001t0020g0020 a0001c0001t0022g0009 a0001c0001t0030g0108 a0001c0001t0031g0018 a0001c0001t0033g0092 a0001c0001t0044g0144 a0001c0002t0001g0106 a0001c0002t0034g0015 a0001c0002t0045g0002 a0001c0003t0001g0044 a0001c0003t0001g0080 a0001c0003t0001g0121 a0001c0003t0007g0010 a0001c0003t0007g0052 a0001c0011t0013g0086 a0005c0010t0001g0111 a0006c0006t0001g0099	33	144	0.2292	9	c.252 others(26): Show c.252+8600_252+8608dupAAAAAAAAA		CTIF	ENSG00000134030.14	transcript	ENST00000256413.8	protein_coding	3/11					INFO_REALIGN_3_PRIME	chr18	TogoVar
CTIF_chr18_48534031_48868217	48832173	C C	CTTTTTTT others(2): Show CTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG01109.hp2 HG01243.hp2 others(28): Show HG01081.hp2 HG01109.hp2 HG01243.hp2 HG01884.hp2 HG02055.hp2 HG02109.hp1 HG02258.hp2 HG02451.hp1 HG02486.hp1 HG02572.hp2 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02723.hp1 HG02723.hp2 HG02818.hp2 HG02896.hp2 HG02970.hp1 HG02970.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp2 HG03195.hp1 HG03209.hp2 HG03225.hp2 HG03453.hp1 HG03516.hp2 HG03540.hp1 HG03579.hp1 HG03579.hp2 NA20300.hp1	a0001 a0003 a0004 a0001 a0003 a0004	a0001c0001 a0001c0002 a0003c0007 others(1): Show a0001c0001 a0001c0002 a0003c0007 a0004c0008	a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 others(17): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0006 a0001c0001t0008 a0001c0001t0013 a0001c0001t0018 a0001c0001t0020 a0001c0001t0023 a0001c0001t0026 a0001c0001t0030 a0001c0001t0036 a0001c0001t0046 a0001c0001t0047 a0001c0001t0052 a0001c0002t0003 a0001c0002t0025 a0001c0002t0042 a0003c0007t0013 a0004c0008t0006	a0001c0001t0002g0025 a0001c0001t0003g0004 a0001c0001t0003g0013 others(28): Show a0001c0001t0002g0025 a0001c0001t0003g0004 a0001c0001t0003g0013 a0001c0001t0003g0029 a0001c0001t0003g0030 a0001c0001t0003g0064 a0001c0001t0003g0098 a0001c0001t0003g0117 a0001c0001t0004g0008 a0001c0001t0004g0084 a0001c0001t0004g0134 a0001c0001t0006g0001 a0001c0001t0008g0007 a0001c0001t0008g0023 a0001c0001t0008g0142 a0001c0001t0013g0127 a0001c0001t0018g0019 a0001c0001t0020g0057 a0001c0001t0023g0048 a0001c0001t0023g0051 a0001c0001t0026g0125 a0001c0001t0030g0108 a0001c0001t0036g0069 a0001c0001t0046g0140 a0001c0001t0047g0031 a0001c0001t0052g0126 a0001c0002t0003g0128 a0001c0002t0025g0130 a0001c0002t0042g0050 a0003c0007t0013g0027 a0004c0008t0006g0045	31	144	0.2153	9	c.152 others(30): Show c.1527+14805_1527+14813dupTTTTTTTTT		CTIF	ENSG00000134030.14	transcript	ENST00000256413.8	protein_coding	10/11					INFO_REALIGN_3_PRIME	chr18	TogoVar
CTLA4_chr2_203862771_203878965	203878725	T T	TAAAAAAA others(2): Show TAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01070.hp2 HG01109.hp1 HG01884.hp2 others(6): Show HG01070.hp2 HG01109.hp1 HG01884.hp2 HG02717.hp1 HG03139.hp1 HG03490.hp1 HG03492.hp2 NA19240.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0008 a0001c0001t0010 others(3): Show a0001c0001t0007 a0001c0001t0008 a0001c0001t0010 a0001c0001t0012 a0001c0001t0014 a0001c0001t0016	a0001c0001t0007g0003 a0001c0001t0008g0003 a0001c0001t0010g0003 others(3): Show a0001c0001t0007g0003 a0001c0001t0008g0003 a0001c0001t0010g0003 a0001c0001t0012g0003 a0001c0001t0014g0003 a0001c0001t0016g0003	9	420	0.0214	9	c.59 others(20): Show c.5913_*5914insAAAAAAAAA		CTLA4	ENSG00000163599.18	transcript	ENST00000648405.2	protein_coding					4761		chr2	TogoVar
CTNNA1_chr5_138748425_138940034	138823956	C C	CAAAAAAA others(2): Show CAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01361.hp2 HG02735.hp1 HG02738.hp1 others(4): Show HG01361.hp2 HG02735.hp1 HG02738.hp1 HG03710.hp1 HG03942.hp2 NA20805.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0002 a0001c0003 a0001c0002 a0001c0003	a0001c0002t0002 a0001c0003t0002 a0001c0002t0002 a0001c0003t0002	a0001c0002t0002g0061 a0001c0002t0002g0065 a0001c0002t0002g0070 others(4): Show a0001c0002t0002g0061 a0001c0002t0002g0065 a0001c0002t0002g0070 a0001c0002t0002g0071 a0001c0002t0002g0079 a0001c0002t0002g0085 a0001c0003t0002g0076	7	180	0.0389	9	c.589 others(24): Show c.589-552_589-544dupAAAAAAAAA		CTNNA1	ENSG00000044115.21	transcript	ENST00000302763.12	protein_coding	5/17					INFO_REALIGN_3_PRIME	chr5	TogoVar
CTNNA1_chr5_138748425_138940034	138916177	C C	CAAAAAAA others(2): Show CAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00639.hp1 HG00642.hp1 others(27): Show HG00323.hp1 HG00639.hp1 HG00642.hp1 HG00735.hp1 HG01070.hp2 HG01071.hp1 HG01074.hp1 HG01168.hp2 HG01169.hp1 HG01361.hp2 HG01515.hp1 HG01516.hp1 HG01884.hp1 HG01943.hp1 HG01975.hp1 HG02258.hp1 HG02602.hp1 HG02698.hp1 HG02735.hp1 HG03239.hp2 HG03492.hp1 HG03516.hp1 HG03654.hp1 HG03942.hp2 HG06807.hp1 NA18961.hp1 NA20805.hp2 NA20905.hp2 NA21309.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0002 a0001c0003 a0001c0002 a0001c0003	a0001c0002t0002 a0001c0002t0003 a0001c0003t0002 a0001c0002t0002 a0001c0002t0003 a0001c0003t0002	a0001c0002t0002g0003 a0001c0002t0002g0035 a0001c0002t0002g0053 others(27): Show a0001c0002t0002g0003 a0001c0002t0002g0035 a0001c0002t0002g0053 a0001c0002t0002g0056 a0001c0002t0002g0057 a0001c0002t0002g0058 a0001c0002t0002g0059 a0001c0002t0002g0060 a0001c0002t0002g0061 a0001c0002t0002g0065 a0001c0002t0002g0066 a0001c0002t0002g0067 a0001c0002t0002g0069 a0001c0002t0002g0070 a0001c0002t0002g0072 a0001c0002t0002g0074 a0001c0002t0002g0075 a0001c0002t0002g0078 a0001c0002t0002g0079 a0001c0002t0002g0080 a0001c0002t0002g0081 a0001c0002t0002g0082 a0001c0002t0002g0083 a0001c0002t0002g0084 a0001c0002t0002g0085 a0001c0002t0003g0027 a0001c0003t0002g0055 a0001c0003t0002g0062 a0001c0003t0002g0063 a0001c0003t0002g0077	30	180	0.1667	9	c.139 others(28): Show c.1390-1559_1390-1551dupAAAAAAAAA		CTNNA1	ENSG00000044115.21	transcript	ENST00000302763.12	protein_coding	10/17					INFO_REALIGN_3_PRIME	chr5	TogoVar
CTNNA2_chr2_79508051_80653780	79860546	G G	GTTTTTTT others(2): Show GTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG02886.hp2 HG02970.hp2 others(1): Show HG00735.hp2 HG02886.hp2 HG02970.hp2 NA18995.hp2	a0001 a0001	a0001c0002 a0001c0009 a0001c0012 a0001c0002 a0001c0009 a0001c0012	a0001c0002t0002 a0001c0009t0001 a0001c0012t0002 a0001c0002t0002 a0001c0009t0001 a0001c0012t0002	a0001c0002t0002g0015 a0001c0002t0002g0065 a0001c0009t0001g0003 others(1): Show a0001c0002t0002g0015 a0001c0002t0002g0065 a0001c0009t0001g0003 a0001c0012t0002g0019	4	68	0.0588	9	c.465 others(26): Show c.465+2378_465+2386dupTTTTTTTTT		CTNNA2	ENSG00000066032.19	transcript	ENST00000402739.9	protein_coding	4/18					INFO_REALIGN_3_PRIME	chr2	TogoVar
CTNNA2_chr2_79508051_80653780	79894063	T T	TTCCTCCT others(2): Show TTCCTCCTCC	intron_variant intron_variant	MODIFIER	HG02572.hp2 HG02647.hp1 HG02572.hp2 HG02647.hp1	a0001 a0001	a0001c0004 a0001c0007 a0001c0004 a0001c0007	a0001c0004t0001 a0001c0007t0001 a0001c0004t0001 a0001c0007t0001	a0001c0004t0001g0059 a0001c0007t0001g0068 a0001c0004t0001g0059 a0001c0007t0001g0068	2	68	0.0294	9	c.853 others(28): Show c.853-15520_853-15512dupCCTCCTCCT		CTNNA2	ENSG00000066032.19	transcript	ENST00000402739.9	protein_coding	6/18					INFO_REALIGN_3_PRIME	chr2	TogoVar
CTNNA2_chr2_79508051_80653780	79982358	C C	CTATATAA others(2): Show CTATATAACA	intron_variant intron_variant	MODIFIER	HG00673.hp1 HG00735.hp2 HG01106.hp2 others(16): Show HG00673.hp1 HG00735.hp2 HG01106.hp2 HG01884.hp1 HG01884.hp2 HG02148.hp1 HG02258.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02647.hp2 HG02886.hp1 HG02965.hp2 HG03098.hp2 HG03209.hp2 HG03225.hp2 HG03471.hp1 HG03486.hp2 HG03927.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0003 others(4): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0010 a0001c0016 a0002c0006	a0001c0001t0001 a0001c0001t0004 a0001c0002t0001 others(8): Show a0001c0001t0001 a0001c0001t0004 a0001c0002t0001 a0001c0002t0002 a0001c0003t0001 a0001c0003t0002 a0001c0004t0001 a0001c0004t0002 a0001c0010t0001 a0001c0016t0001 a0002c0006t0001	a0001c0001t0001g0010 a0001c0001t0001g0012 a0001c0001t0001g0028 others(16): Show a0001c0001t0001g0010 a0001c0001t0001g0012 a0001c0001t0001g0028 a0001c0001t0001g0030 a0001c0001t0001g0033 a0001c0001t0001g0042 a0001c0001t0001g0056 a0001c0001t0001g0058 a0001c0001t0004g0061 a0001c0002t0001g0037 a0001c0002t0001g0047 a0001c0002t0002g0015 a0001c0003t0001g0005 a0001c0003t0002g0044 a0001c0004t0001g0032 a0001c0004t0002g0048 a0001c0010t0001g0024 a0001c0016t0001g0045 a0002c0006t0001g0020	19	68	0.2794	9	c.105 others(30): Show c.1056+72568_1056+72576dupACATATATA		CTNNA2	ENSG00000066032.19	transcript	ENST00000402739.9	protein_coding	7/18					INFO_REALIGN_3_PRIME	chr2	TogoVar
CTNNA2_chr2_79508051_80653780	80355933	C C	CTTTTTTT others(2): Show CTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02572.hp2 HG02622.hp1 HG02886.hp2 others(2): Show HG02572.hp2 HG02622.hp1 HG02886.hp2 HG03098.hp1 HG03453.hp1	a0001 a0002 a0001 a0002	a0001c0002 a0001c0003 a0001c0007 others(2): Show a0001c0002 a0001c0003 a0001c0007 a0001c0009 a0002c0006	a0001c0002t0001 a0001c0003t0005 a0001c0007t0001 others(2): Show a0001c0002t0001 a0001c0003t0005 a0001c0007t0001 a0001c0009t0001 a0002c0006t0001	a0001c0002t0001g0023 a0001c0003t0005g0017 a0001c0007t0001g0068 others(2): Show a0001c0002t0001g0023 a0001c0003t0005g0017 a0001c0007t0001g0068 a0001c0009t0001g0003 a0002c0006t0001g0020	5	68	0.0735	9	c.105 others(30): Show c.1057-37270_1057-37269insTTTTTTTTT		CTNNA2	ENSG00000066032.19	transcript	ENST00000402739.9	protein_coding	7/18					INFO_REALIGN_3_PRIME	chr2	TogoVar
CTNNA2_chr2_79508051_80653780	80376647	T T	TTAGAAAA others(2): Show TTAGAAAAGA	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG03209.hp1 HG02258.hp1 HG03209.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0003t0001 a0001c0001t0001 a0001c0003t0001	a0001c0001t0001g0054 a0001c0003t0001g0026 a0001c0001t0001g0054 a0001c0003t0001g0026	2	68	0.0294	9	c.105 others(30): Show c.1057-16564_1057-16563insTAGAAAAGA		CTNNA2	ENSG00000066032.19	transcript	ENST00000402739.9	protein_coding	7/18						chr2	TogoVar
CTNNA2_chr2_79508051_80653780	80601417	C C	CTTTTTTT others(2): Show CTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG00642.hp2 HG00673.hp1 others(10): Show HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG01106.hp1 HG01167.hp2 HG02148.hp2 HG02622.hp2 HG02809.hp1 HG02970.hp2 HG03486.hp1 HG03688.hp1 NA18995.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(3): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0012	a0001c0001t0002 a0001c0002t0002 a0001c0003t0002 others(3): Show a0001c0001t0002 a0001c0002t0002 a0001c0003t0002 a0001c0004t0002 a0001c0005t0002 a0001c0012t0002	a0001c0001t0002g0027 a0001c0001t0002g0029 a0001c0001t0002g0041 others(10): Show a0001c0001t0002g0027 a0001c0001t0002g0029 a0001c0001t0002g0041 a0001c0001t0002g0057 a0001c0001t0002g0066 a0001c0002t0002g0065 a0001c0003t0002g0008 a0001c0003t0002g0044 a0001c0004t0002g0048 a0001c0005t0002g0009 a0001c0005t0002g0043 a0001c0005t0002g0063 a0001c0012t0002g0019	13	68	0.1912	9	c.219 others(28): Show c.2190-2654_2190-2653insTTTTTTTTT		CTNNA2	ENSG00000066032.19	transcript	ENST00000402739.9	protein_coding	15/18					INFO_REALIGN_3_PRIME	chr2	TogoVar
CTNNA3_chr10_65907523_67701195	66015105	A A	AAATAATA others(2): Show AAATAATAAT	intron_variant intron_variant	MODIFIER	HG02280.hp2 HG02818.hp1 HG02922.hp2 others(5): Show HG02280.hp2 HG02818.hp1 HG02922.hp2 NA18612.hp1 NA18960.hp2 NA18964.hp1 NA18964.hp2 NA19080.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0003 a0001c0001t0005 a0001c0001t0016 others(5): Show a0001c0001t0003 a0001c0001t0005 a0001c0001t0016 a0001c0001t0020 a0001c0001t0025 a0002c0002t0002 a0002c0002t0003 a0002c0002t0017	a0001c0001t0003g0023 a0001c0001t0005g0010 a0001c0001t0016g0003 others(5): Show a0001c0001t0003g0023 a0001c0001t0005g0010 a0001c0001t0016g0003 a0001c0001t0020g0030 a0001c0001t0025g0045 a0002c0002t0002g0013 a0002c0002t0003g0042 a0002c0002t0017g0040	8	46	0.1739	9	c.216 others(30): Show c.2160-26317_2160-26309dupATTATTATT		CTNNA3	ENSG00000183230.18	transcript	ENST00000433211.7	protein_coding	15/17						chr10	TogoVar
CTNNA3_chr10_65907523_67701195	66547343	C C	CTTTTTTT others(2): Show CTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01070.hp2 HG01081.hp1 HG02145.hp1 others(11): Show HG01070.hp2 HG01081.hp1 HG02145.hp1 HG02622.hp2 HG02647.hp1 HG02895.hp1 HG02895.hp2 HG02965.hp2 HG03195.hp1 HG03540.hp1 HG03540.hp2 NA18612.hp1 NA18612.hp2 NA18964.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0001c0005 others(3): Show a0001c0001 a0001c0003 a0001c0005 a0001c0006 a0001c0007 a0002c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(11): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 a0001c0001t0008 a0001c0001t0009 a0001c0001t0012 a0001c0001t0023 a0001c0003t0022 a0001c0005t0010 a0001c0006t0001 a0001c0007t0015 a0002c0002t0003 a0002c0002t0004	a0001c0001t0001g0015 a0001c0001t0002g0009 a0001c0001t0004g0043 others(11): Show a0001c0001t0001g0015 a0001c0001t0002g0009 a0001c0001t0004g0043 a0001c0001t0005g0010 a0001c0001t0008g0004 a0001c0001t0009g0031 a0001c0001t0012g0038 a0001c0001t0023g0011 a0001c0003t0022g0022 a0001c0005t0010g0034 a0001c0006t0001g0001 a0001c0007t0015g0016 a0002c0002t0003g0042 a0002c0002t0004g0028	14	46	0.3044	9	c.137 others(30): Show c.1375-26571_1375-26570insAAAAAAAAA		CTNNA3	ENSG00000183230.18	transcript	ENST00000433211.7	protein_coding	10/17						chr10	TogoVar
CTNNA3_chr10_65907523_67701195	66702732	A A	AAGTAGTA others(2): Show AAGTAGTAGT	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG02145.hp2 HG02280.hp1 others(8): Show HG01081.hp2 HG02145.hp2 HG02280.hp1 HG02622.hp2 HG02895.hp1 HG02896.hp1 HG02897.hp1 HG02965.hp2 HG03130.hp1 HG03540.hp2 HG03579.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0003 a0001c0005 others(3): Show a0001c0001 a0001c0003 a0001c0005 a0001c0011 a0002c0002 a0003c0009	a0001c0001t0001 a0001c0001t0002 a0001c0001t0009 others(7): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0009 a0001c0003t0008 a0001c0003t0022 a0001c0005t0010 a0001c0011t0009 a0002c0002t0004 a0002c0002t0013 a0003c0009t0003	a0001c0001t0001g0006 a0001c0001t0002g0009 a0001c0001t0002g0024 others(8): Show a0001c0001t0001g0006 a0001c0001t0002g0009 a0001c0001t0002g0024 a0001c0001t0009g0031 a0001c0003t0008g0002 a0001c0003t0022g0022 a0001c0005t0010g0029 a0001c0011t0009g0017 a0002c0002t0004g0028 a0002c0002t0013g0026 a0003c0009t0003g0036	11	46	0.2391	9	c.128 others(30): Show c.1281+63523_1281+63531dupACTACTACT		CTNNA3	ENSG00000183230.18	transcript	ENST00000433211.7	protein_coding	9/17						chr10	TogoVar
CTNNA3_chr10_65907523_67701195	66829854	T T	TTTGTTGT others(2): Show TTTGTTGTTG	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG02818.hp1 HG02895.hp2 others(2): Show HG01081.hp2 HG02818.hp1 HG02895.hp2 HG02922.hp1 HG03130.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0001c0004 others(2): Show a0001c0001 a0001c0003 a0001c0004 a0001c0005 a0002c0002	a0001c0001t0020 a0001c0003t0008 a0001c0004t0001 others(2): Show a0001c0001t0020 a0001c0003t0008 a0001c0004t0001 a0001c0005t0010 a0002c0002t0026	a0001c0001t0020g0030 a0001c0003t0008g0002 a0001c0004t0001g0018 others(2): Show a0001c0001t0020g0030 a0001c0003t0008g0002 a0001c0004t0001g0018 a0001c0005t0010g0034 a0002c0002t0026g0046	5	46	0.1087	9	c.104 others(30): Show c.1048-54339_1048-54331dupCAACAACAA		CTNNA3	ENSG00000183230.18	transcript	ENST00000433211.7	protein_coding	7/17						chr10	TogoVar
CTNND1_chr11_57756802_57824540	57771422	T T	TTATATAG others(2): Show TTATATAGAG	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG00408.hp2 HG00438.hp2 others(95): Show HG00323.hp2 HG00408.hp2 HG00438.hp2 HG00544.hp1 HG00609.hp1 HG00621.hp1 HG00639.hp1 HG00673.hp2 HG00735.hp2 HG00738.hp1 HG01074.hp1 HG01081.hp1 HG01099.hp1 HG01106.hp2 HG01168.hp1 HG01175.hp1 HG01192.hp2 HG01255.hp2 HG01257.hp2 HG01258.hp1 HG01346.hp1 HG01358.hp2 HG01361.hp1 HG01928.hp1 HG01934.hp2 HG01978.hp1 HG01993.hp2 HG02004.hp2 HG02056.hp1 HG02071.hp2 HG02080.hp1 HG02080.hp2 HG02129.hp2 HG02135.hp1 HG02257.hp2 HG02293.hp1 HG02300.hp1 HG02622.hp2 HG02647.hp1 HG02683.hp1 HG02717.hp1 HG02735.hp2 HG02895.hp2 HG03017.hp1 HG03041.hp1 HG03239.hp1 HG03491.hp1 HG03492.hp2 HG03540.hp2 HG03688.hp1 HG03704.hp1 HG03831.hp1 HG03834.hp2 HG03927.hp1 HG04184.hp1 HG04199.hp1 NA18522.hp1 NA18522.hp2 NA18747.hp1 NA18943.hp2 NA18945.hp1 NA18946.hp1 NA18947.hp2 NA18950.hp1 NA18954.hp1 NA18954.hp2 NA18957.hp2 NA18961.hp1 NA18964.hp1 NA18971.hp1 NA18971.hp2 NA18975.hp2 NA18977.hp2 NA18979.hp2 NA18983.hp2 NA18985.hp1 NA18991.hp1 NA18998.hp1 NA19002.hp1 NA19003.hp2 NA19007.hp1 NA19009.hp1 NA19010.hp2 NA19030.hp1 NA19030.hp2 NA19064.hp2 NA19066.hp1 NA19067.hp1 NA19074.hp1 NA19074.hp2 NA19078.hp1 NA19080.hp2 NA19086.hp1 NA19088.hp1 NA20752.hp1 NA20805.hp2 NA20905.hp1 homoSapiens_chm13v2.hp1	a0001 a0005 a0001 a0005	a0001c0001 a0001c0002 a0001c0010 others(1): Show a0001c0001 a0001c0002 a0001c0010 a0005c0011	a0001c0001t0001 a0001c0001t0006 a0001c0001t0009 others(5): Show a0001c0001t0001 a0001c0001t0006 a0001c0001t0009 a0001c0001t0011 a0001c0001t0013 a0001c0002t0002 a0001c0010t0001 a0005c0011t0001	a0001c0001t0001g0002 a0001c0001t0001g0006 a0001c0001t0001g0007 others(88): Show a0001c0001t0001g0002 a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0001g0099 a0001c0001t0001g0100 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0111 a0001c0001t0001g0112 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0117 a0001c0001t0001g0118 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0123 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0129 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0001g0137 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0140 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0150 a0001c0001t0001g0152 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0001g0155 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0162 a0001c0001t0001g0163 a0001c0001t0001g0164 a0001c0001t0001g0165 a0001c0001t0001g0170 a0001c0001t0001g0171 a0001c0001t0001g0173 a0001c0001t0001g0174 a0001c0001t0001g0175 a0001c0001t0001g0176 a0001c0001t0001g0264 a0001c0001t0006g0011 a0001c0001t0006g0167 a0001c0001t0006g0168 a0001c0001t0006g0169 a0001c0001t0009g0002 a0001c0001t0011g0151 a0001c0001t0013g0122 a0001c0002t0002g0014 a0001c0002t0002g0016 a0001c0002t0002g0057 a0001c0010t0001g0105 a0005c0011t0001g0159	98	288	0.3403	9	c.-21 others(28): Show c.-214+9305_-214+9313dupATATAGAGT		CTNND1	ENSG00000198561.16	transcript	ENST00000399050.10	protein_coding	1/20					INFO_REALIGN_3_PRIME	chr11	TogoVar
CTNND2_chr5_10966836_11909446	11262761	C C	CAAAAAAA others(2): Show CAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG03130.hp1 HG03471.hp2 HG02258.hp2 HG03130.hp1 HG03471.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0003 a0001c0002t0001 a0001c0001t0001 a0001c0001t0003 a0001c0002t0001	a0001c0001t0001g0024 a0001c0001t0003g0026 a0001c0002t0001g0013 a0001c0001t0001g0024 a0001c0001t0003g0026 a0001c0002t0001g0013	3	26	0.1154	9	c.162 others(30): Show c.1629-25947_1629-25939dupTTTTTTTTT		CTNND2	ENSG00000169862.21	transcript	ENST00000304623.13	protein_coding	9/21						chr5	TogoVar
CTNND2_chr5_10966836_11909446	11816691	G G	GAGAGAGA others(2): Show GAGAGAGAGA	intron_variant intron_variant	MODIFIER	HG03130.hp1 HG03209.hp2 HG03130.hp1 HG03209.hp2	a0001 a0001	a0001c0001 a0001c0009 a0001c0001 a0001c0009	a0001c0001t0003 a0001c0009t0001 a0001c0001t0003 a0001c0009t0001	a0001c0001t0003g0026 a0001c0009t0001g0008 a0001c0001t0003g0026 a0001c0009t0001g0008	2	26	0.0769	9	c.38- others(26): Show c.38-84420_38-84419insTCTCTCTCT		CTNND2	ENSG00000169862.21	transcript	ENST00000304623.13	protein_coding	1/21						chr5	TogoVar
CTNND2_chr5_10966836_11909446	11865908	A A	AAAAAAAA others(2): Show AAAAAAAAAC	intron_variant intron_variant	MODIFIER	HG02647.hp1 HG03130.hp1 HG03471.hp1 HG02647.hp1 HG03130.hp1 HG03471.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0004 a0001c0001t0001g0011 a0001c0001t0003g0026 a0001c0001t0001g0004 a0001c0001t0001g0011 a0001c0001t0003g0026	3	26	0.1154	9	c.37+ others(26): Show c.37+37908_37+37909insGTTTTTTTT		CTNND2	ENSG00000169862.21	transcript	ENST00000304623.13	protein_coding	1/21						chr5	TogoVar
CTPS2_chrX_16582999_16717669	16621446	T T	TATAATAA others(2): Show TATAATAATA	intron_variant intron_variant	MODIFIER	HG00609.hp1 HG02922.hp1 NA18906.hp1 HG00609.hp1 HG02922.hp1 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0017 a0001c0001t0002g0018 a0001c0001t0002g0073 a0001c0001t0002g0017 a0001c0001t0002g0018 a0001c0001t0002g0073	3	226	0.0133	9	c.139 others(28): Show c.1394-1123_1394-1115dupTATTATTAT		CTPS2	ENSG00000047230.15	transcript	ENST00000359276.9	protein_coding	14/18						chrX	TogoVar
CTPS2_chrX_16582999_16717669	16639777	A A	AAAAAGAA others(2): Show AAAAAGAAAG	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG02559.hp1 NA19043.hp1 HG00735.hp1 HG02559.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0005 a0001c0001t0002 a0001c0001t0005	a0001c0001t0002g0006 a0001c0001t0002g0126 a0001c0001t0005g0067 a0001c0001t0002g0006 a0001c0001t0002g0126 a0001c0001t0005g0067	3	226	0.0133	9	c.129 others(26): Show c.1297-535_1297-534insCTTTCTTTT		CTPS2	ENSG00000047230.15	transcript	ENST00000359276.9	protein_coding	13/18						chrX	TogoVar
CTPS2_chrX_16582999_16717669	16647255	C C	CTTTTTTT others(2): Show CTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02723.hp1 HG02723.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0193 a0001c0001t0002g0193	1	226	0.0044	9	c.129 others(28): Show c.1297-8021_1297-8013dupAAAAAAAAA		CTPS2	ENSG00000047230.15	transcript	ENST00000359276.9	protein_coding	13/18						chrX	TogoVar
CTPS2_chrX_16582999_16717669	16658241	C C	CAAGAAAC others(2): Show CAAGAAACAG	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG00639.hp2 HG00639.hp1 HG00639.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0027 a0001c0001t0001g0150 a0001c0001t0001g0027 a0001c0001t0001g0150	2	226	0.0089	9	c.129 others(28): Show c.1296+9264_1296+9272dupCTGTTTCTT		CTPS2	ENSG00000047230.15	transcript	ENST00000359276.9	protein_coding	13/18						chrX	TogoVar
CTR9_chr11_10746246_10784746	10747340	A A	ATATATAT others(2): Show ATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00140.hp1 HG00280.hp1 HG00408.hp2 others(53): Show HG00140.hp1 HG00280.hp1 HG00408.hp2 HG00438.hp1 HG00558.hp2 HG00639.hp2 HG01074.hp1 HG01109.hp2 HG01433.hp2 HG01928.hp2 HG02004.hp1 HG02040.hp2 HG02129.hp1 HG02572.hp2 HG02970.hp1 HG03017.hp1 HG03491.hp2 HG03669.hp1 HG03704.hp2 HG03927.hp2 NA18522.hp2 NA18612.hp2 NA18940.hp2 NA18944.hp2 NA18948.hp2 NA18953.hp2 NA18957.hp1 NA18957.hp2 NA18960.hp1 NA18966.hp1 NA18975.hp1 NA18977.hp1 NA18978.hp1 NA18980.hp2 NA18982.hp1 NA18984.hp2 NA18987.hp2 NA18990.hp1 NA18990.hp2 NA18992.hp1 NA19003.hp1 NA19004.hp1 NA19011.hp1 NA19043.hp1 NA19055.hp2 NA19056.hp2 NA19058.hp2 NA19063.hp1 NA19064.hp2 NA19066.hp1 NA19077.hp1 NA19079.hp2 NA19080.hp1 NA19085.hp2 NA19087.hp1 NA19090.hp1	a0001 a0002 a0005 a0001 a0002 a0005	a0001c0001 a0001c0002 a0001c0003 others(3): Show a0001c0001 a0001c0002 a0001c0003 a0001c0005 a0002c0010 a0005c0012	a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 a0001c0003t0002 a0001c0005t0002 a0002c0010t0001 a0005c0012t0002	a0001c0001t0001g0005 a0001c0001t0001g0010 a0001c0001t0001g0035 others(29): Show a0001c0001t0001g0005 a0001c0001t0001g0010 a0001c0001t0001g0035 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0132 a0001c0001t0001g0148 a0001c0001t0001g0153 a0001c0001t0001g0161 a0001c0001t0001g0179 a0001c0001t0002g0001 a0001c0001t0002g0044 a0001c0001t0002g0106 a0001c0001t0002g0164 a0001c0001t0002g0165 a0001c0001t0002g0166 a0001c0001t0002g0168 a0001c0001t0002g0172 a0001c0001t0002g0173 a0001c0001t0002g0174 a0001c0001t0002g0175 a0001c0001t0002g0176 a0001c0001t0002g0177 a0001c0001t0002g0178 a0001c0002t0001g0002 a0001c0002t0001g0013 a0001c0002t0001g0139 a0001c0003t0002g0184 a0001c0005t0002g0001 a0001c0005t0002g0170 a0002c0010t0001g0133 a0005c0012t0002g0167	56	406	0.1379	9	c.-40 others(20): Show c.-4073_-4072insTATATATAT		CTR9	ENSG00000198730.9	transcript	ENST00000361367.7	protein_coding					3905		chr11	TogoVar
CTSA_chr20_45886335_45903820	45901947	G G	GCCTCAAG others(2): Show GCCTCAAGGT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02109.hp1 HG02886.hp2 HG03540.hp2 HG02109.hp1 HG02886.hp2 HG03540.hp2	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0001 a0001c0006t0001	a0001c0006t0001g0025 a0001c0006t0001g0025	3	430	0.0070	9	c.34 others(20): Show c.3497_*3498insCCTCAAGGT		CTSA	ENSG00000064601.21	transcript	ENST00000646241.3	protein_coding					3128		chr20	TogoVar
CTSC_chr11_88288592_88342736	88291563	G G	GATGAAAG others(2): Show GATGAAAGAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp2 HG00408.hp1 HG00597.hp1 others(36): Show HG00099.hp2 HG00408.hp1 HG00597.hp1 HG00733.hp1 HG01081.hp2 HG01167.hp1 HG01192.hp1 HG01496.hp2 HG02056.hp1 HG02083.hp2 HG02145.hp1 HG02148.hp1 HG02258.hp1 NA18612.hp2 NA18943.hp1 NA18944.hp1 NA18945.hp1 NA18947.hp1 NA18950.hp2 NA18955.hp1 NA18965.hp2 NA18966.hp2 NA18974.hp1 NA18978.hp2 NA18988.hp1 NA18991.hp1 NA19010.hp2 NA19055.hp1 NA19063.hp2 NA19065.hp1 NA19065.hp2 NA19072.hp1 NA19074.hp2 NA19080.hp1 NA19080.hp2 NA19082.hp2 NA19088.hp1 NA19090.hp2 NA19091.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0007 a0001c0001t0001g0009 a0001c0001t0001g0013 others(29): Show a0001c0001t0001g0007 a0001c0001t0001g0009 a0001c0001t0001g0013 a0001c0001t0001g0018 a0001c0001t0001g0030 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0119 a0001c0001t0001g0137 a0001c0001t0001g0141 a0001c0001t0001g0149 a0001c0001t0001g0151 a0001c0001t0001g0152 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0001g0155 a0001c0001t0001g0158 a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0165 a0001c0001t0001g0166 a0001c0001t0001g0167 a0001c0001t0001g0275 a0001c0001t0001g0278 a0001c0001t0001g0279 a0001c0001t0001g0280 a0001c0001t0001g0281 a0001c0001t0001g0285 a0001c0001t0001g0286 a0001c0001t0001g0287 a0001c0001t0003g0314 a0001c0001t0003g0316	39	434	0.0899	9	c.24 others(20): Show c.2442_*2443insTTCTTTCAT		CTSC	ENSG00000109861.17	transcript	ENST00000227266.10	protein_coding					2028		chr11	TogoVar

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