Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact

Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	external
FOXE1_chr9_97848226_97861717	97854424	C C	CGCTGCCG others(2): Show CGCTGCCGCA	disruptive_inframe_insertion disruptive_inframe_insertion	MODERATE	HG01361.hp1 HG03704.hp1 HG03704.hp2 HG01361.hp1 HG03704.hp1 HG03704.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	3	326	0.0092	9	c.512 others(16): Show c.512_513insTGCCGCAGC	p.Ala others(13): Show p.Ala169_Ala171dup	FOXE1	ENSG00000178919.9	transcript	ENST00000375123.5	protein_coding	1/1	1202/3492	513/1122	171/373		INFO_REALIGN_3_PRIME	chr9	TogoVar
FOXI2_chr10_127732185_127746183	127739901	A A	ACACCACA others(2): Show ACACCACACC	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01346.hp2 HG02622.hp1 HG02922.hp1 others(1): Show HG01346.hp2 HG02622.hp1 HG02922.hp1 HG03471.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0025 a0001c0001t0116 a0001c0001t0025 a0001c0001t0116	a0001c0001t0025g0002 a0001c0001t0116g0002 a0001c0001t0025g0002 a0001c0001t0116g0002	4	432	0.0093	9	c.93 others(18): Show c.939_*940insCACACCCAC		FOXI2	ENSG00000186766.8	transcript	ENST00000388920.5	protein_coding	2/2				940	INFO_REALIGN_3_PRIME	chr10	TogoVar
FOXJ3_chr1_42171548_42340235	42221969	A A	AGGGGGAG others(2): Show AGGGGGAGGG	intron_variant intron_variant	MODIFIER	HG02074.hp2 NA18954.hp2 NA18986.hp1 others(4): Show HG02074.hp2 NA18954.hp2 NA18986.hp1 NA18986.hp2 NA19072.hp1 NA19085.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0001t0001 a0001c0001t0002 a0001c0001t0005	a0001c0001t0001g0015 a0001c0001t0001g0031 a0001c0001t0001g0171 others(4): Show a0001c0001t0001g0015 a0001c0001t0001g0031 a0001c0001t0001g0171 a0001c0001t0001g0197 a0001c0001t0001g0271 a0001c0001t0002g0268 a0001c0001t0005g0004	7	315	0.0222	9	c.528 others(26): Show c.528+5913_528+5914insCCCTCCCCC		FOXJ3	ENSG00000198815.9	transcript	ENST00000361346.6	protein_coding	5/12						chr1	TogoVar
FOXJ3_chr1_42171548_42340235	42222032	A A	AGGGGGAG others(2): Show AGGGGGAGGG	intron_variant intron_variant	MODIFIER	HG00738.hp1 NA18961.hp2 NA19011.hp1 others(1): Show HG00738.hp1 NA18961.hp2 NA19011.hp1 NA19083.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0016 a0001c0001t0017 a0001c0001t0001 a0001c0001t0016 a0001c0001t0017	a0001c0001t0001g0131 a0001c0001t0001g0173 a0001c0001t0016g0210 others(1): Show a0001c0001t0001g0131 a0001c0001t0001g0173 a0001c0001t0016g0210 a0001c0001t0017g0203	4	311	0.0129	9	c.528 others(26): Show c.528+5850_528+5851insCCCTCCCCC		FOXJ3	ENSG00000198815.9	transcript	ENST00000361346.6	protein_coding	5/12						chr1	TogoVar
FOXJ3_chr1_42171548_42340235	42222046	G G	GAGAAGAA others(2): Show GAGAAGAAGA	intron_variant intron_variant	MODIFIER	NA18945.hp2 NA18946.hp1 NA18982.hp1 others(2): Show NA18945.hp2 NA18946.hp1 NA18982.hp1 NA18989.hp2 NA19012.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0007 a0001c0001t0001 a0001c0001t0002 a0001c0001t0007	a0001c0001t0001g0090 a0001c0001t0002g0243 a0001c0001t0002g0258 others(2): Show a0001c0001t0001g0090 a0001c0001t0002g0243 a0001c0001t0002g0258 a0001c0001t0002g0262 a0001c0001t0007g0329	5	131	0.0382	9	c.528 others(26): Show c.528+5828_528+5836dupTCTTCTTCT		FOXJ3	ENSG00000198815.9	transcript	ENST00000361346.6	protein_coding	5/12						chr1	TogoVar
FOXJ3_chr1_42171548_42340235	42222046	G G	GAGAAGGA others(2): Show GAGAAGGAGA	intron_variant intron_variant	MODIFIER	HG01433.hp2 HG03834.hp1 NA18906.hp1 HG01433.hp2 HG03834.hp1 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0013 a0001c0001t0002 a0001c0001t0013	a0001c0001t0002g0296 a0001c0001t0002g0298 a0001c0001t0013g0240 a0001c0001t0002g0296 a0001c0001t0002g0298 a0001c0001t0013g0240	3	129	0.0233	9	c.528 others(26): Show c.528+5836_528+5837insTCTCCTTCT		FOXJ3	ENSG00000198815.9	transcript	ENST00000361346.6	protein_coding	5/12						chr1	TogoVar
FOXJ3_chr1_42171548_42340235	42309001	C C	CAAAAAAA others(2): Show CAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG01891.hp1 HG02135.hp1 others(9): Show HG01243.hp2 HG01891.hp1 HG02135.hp1 HG02486.hp2 HG02723.hp1 HG02818.hp2 HG03017.hp2 NA18960.hp1 NA18961.hp2 NA18968.hp2 NA18985.hp1 NA19240.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0001 a0001c0001t0008 a0001c0001t0009 others(2): Show a0001c0001t0001 a0001c0001t0008 a0001c0001t0009 a0001c0001t0016 a0003c0003t0019	a0001c0001t0001g0008 a0001c0001t0001g0134 a0001c0001t0001g0174 others(9): Show a0001c0001t0001g0008 a0001c0001t0001g0134 a0001c0001t0001g0174 a0001c0001t0001g0175 a0001c0001t0001g0177 a0001c0001t0001g0193 a0001c0001t0008g0012 a0001c0001t0008g0014 a0001c0001t0009g0220 a0001c0001t0009g0221 a0001c0001t0016g0210 a0003c0003t0019g0191	12	123	0.0976	9	c.44+ others(24): Show c.44+2040_44+2048dupTTTTTTTTT		FOXJ3	ENSG00000198815.9	transcript	ENST00000361346.6	protein_coding	2/12						chr1	TogoVar
FOXK1_chr7_4677295_4776442	4704834	C C	CTTTTTTT others(2): Show CTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01070.hp2 HG01071.hp1 HG01496.hp2 others(4): Show HG01070.hp2 HG01071.hp1 HG01496.hp2 HG02630.hp1 HG03041.hp1 HG03130.hp1 NA19030.hp1	a0001 a0001	a0001c0002 a0001c0003 a0001c0004 others(3): Show a0001c0002 a0001c0003 a0001c0004 a0001c0006 a0001c0007 a0001c0011	a0001c0002t0069 a0001c0003t0018 a0001c0004t0038 others(3): Show a0001c0002t0069 a0001c0003t0018 a0001c0004t0038 a0001c0006t0009 a0001c0007t0004 a0001c0011t0004	a0001c0002t0069g0268 a0001c0003t0018g0207 a0001c0004t0038g0010 others(3): Show a0001c0002t0069g0268 a0001c0003t0018g0207 a0001c0004t0038g0010 a0001c0006t0009g0002 a0001c0007t0004g0234 a0001c0011t0004g0280	7	226	0.0310	9	c.560 others(28): Show c.560+21973_560+21981dupTTTTTTTTT		FOXK1	ENSG00000164916.11	transcript	ENST00000328914.5	protein_coding	1/8					INFO_REALIGN_3_PRIME	chr7	TogoVar
FOXL2NB_chr3_138942217_138958990	138943384	C C	CGGCGGGG others(2): Show CGGCGGGGGG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00438.hp2 HG00544.hp1 HG00544.hp2 others(29): Show HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00738.hp2 HG01109.hp2 HG02027.hp2 HG02055.hp1 HG02071.hp1 HG02074.hp1 HG02080.hp1 HG02132.hp1 HG02155.hp1 HG02615.hp1 HG02622.hp2 HG03139.hp2 HG03195.hp1 HG03654.hp1 NA18747.hp1 NA18945.hp1 NA18945.hp2 NA18955.hp1 NA18971.hp1 NA18972.hp1 NA18975.hp2 NA18980.hp2 NA18989.hp1 NA19005.hp2 NA19057.hp1 NA19063.hp1 NA19070.hp1 NA19086.hp1 NA19090.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0003 a0001c0001t0052 others(5): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0052 a0001c0002t0002 a0001c0002t0005 a0001c0002t0009 a0001c0002t0010 a0001c0002t0018	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0003g0001 others(9): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0003g0001 a0001c0001t0003g0010 a0001c0001t0052g0001 a0001c0002t0002g0003 a0001c0002t0002g0007 a0001c0002t0005g0004 a0001c0002t0009g0006 a0001c0002t0010g0024 a0001c0002t0010g0029 a0001c0002t0018g0003	32	240	0.1333	9	c.-39 others(20): Show c.-3981_-3980insGGCGGGGGG		FOXL2NB	ENSG00000206262.9	transcript	ENST00000383165.4	protein_coding					3832		chr3	TogoVar
FOXL2NB_chr3_138942217_138958990	138956656	A A	ATTTTTTT others(2): Show ATTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00738.hp2 HG01243.hp2 HG02055.hp1 others(16): Show HG00738.hp2 HG01243.hp2 HG02055.hp1 HG02109.hp2 HG02896.hp1 HG02897.hp2 HG02976.hp1 HG02976.hp2 HG03453.hp1 HG03471.hp2 HG03831.hp1 HG04204.hp2 HG06807.hp1 NA18522.hp1 NA18522.hp2 NA18974.hp1 NA19000.hp2 NA19030.hp1 NA19240.hp1	a0001 a0002 a0005 a0001 a0002 a0005	a0001c0001 a0001c0002 a0002c0003 others(1): Show a0001c0001 a0001c0002 a0002c0003 a0005c0011	a0001c0001t0004 a0001c0001t0048 a0001c0002t0002 others(8): Show a0001c0001t0004 a0001c0001t0048 a0001c0002t0002 a0001c0002t0010 a0001c0002t0018 a0001c0002t0044 a0002c0003t0007 a0002c0003t0029 a0002c0003t0045 a0002c0003t0058 a0005c0011t0007	a0001c0001t0004g0005 a0001c0001t0048g0036 a0001c0002t0002g0003 others(12): Show a0001c0001t0004g0005 a0001c0001t0048g0036 a0001c0002t0002g0003 a0001c0002t0002g0013 a0001c0002t0010g0024 a0001c0002t0010g0029 a0001c0002t0018g0013 a0001c0002t0044g0042 a0002c0003t0007g0006 a0002c0003t0007g0014 a0002c0003t0007g0031 a0002c0003t0029g0006 a0002c0003t0045g0014 a0002c0003t0058g0006 a0005c0011t0007g0006	19	243	0.0782	9	c.60 others(20): Show c.6084_*6085insTTTTTTTTT		FOXL2NB	ENSG00000206262.9	transcript	ENST00000383165.4	protein_coding					2667		chr3	TogoVar
FOXL2_chr3_138939224_138952137	138943384	C C	CGGCGGGG others(2): Show CGGCGGGGGG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00438.hp2 HG00544.hp1 HG00544.hp2 others(31): Show HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00738.hp2 HG01109.hp1 HG02027.hp2 HG02055.hp2 HG02071.hp2 HG02074.hp2 HG02080.hp2 HG02132.hp1 HG02155.hp1 HG02615.hp1 HG02622.hp2 HG03139.hp2 HG03195.hp2 HG03654.hp1 NA18747.hp1 NA18939.hp1 NA18945.hp1 NA18945.hp2 NA18955.hp1 NA18971.hp1 NA18972.hp1 NA18975.hp1 NA18980.hp2 NA18989.hp1 NA19005.hp1 NA19057.hp1 NA19070.hp2 NA19078.hp1 NA19080.hp2 NA19086.hp1 NA19090.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0008 a0001c0001t0026 others(3): Show a0001c0001t0001 a0001c0001t0008 a0001c0001t0026 a0002c0002t0002 a0002c0002t0004 a0002c0002t0022	a0001c0001t0001g0000 a0001c0001t0008g0000 a0001c0001t0026g0000 others(3): Show a0001c0001t0001g0000 a0001c0001t0008g0000 a0001c0001t0026g0000 a0002c0002t0002g0000 a0002c0002t0004g0000 a0002c0002t0022g0000	34	245	0.1388	9	c.22 others(20): Show c.2207_*2208insCCCCCCGCC		FOXL2	ENSG00000183770.7	transcript	ENST00000648323.1	protein_coding					839		chr3	TogoVar
FOXM1_chr12_2852680_2882174	2879612	G G	GCTGGGAT others(2): Show GCTGGGATTA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00423.hp1 NA18984.hp2 NA19001.hp2 others(1): Show HG00423.hp1 NA18984.hp2 NA19001.hp2 NA19066.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0042 a0001c0002t0001g0302 a0001c0002t0001g0309 others(1): Show a0001c0002t0001g0042 a0001c0002t0001g0302 a0001c0002t0001g0309 a0001c0002t0001g0315	4	436	0.0092	9	c.-27 others(20): Show c.-2741_-2740insTAATCCCAG		FOXM1	ENSG00000111206.13	transcript	ENST00000359843.8	protein_coding					2439		chr12	TogoVar
FOXN3_chr14_89151177_89422233	89246542	C C	CTTTTTTT others(2): Show CTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01993.hp2 HG02559.hp1 others(3): Show HG01109.hp1 HG01993.hp2 HG02559.hp1 HG02818.hp1 NA18997.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0015 a0001c0001t0025 others(3): Show a0001c0001t0001 a0001c0001t0015 a0001c0001t0025 a0001c0001t0039 a0001c0001t0057 a0001c0001t0069	a0001c0001t0001g0109 a0001c0001t0015g0162 a0001c0001t0025g0202 others(3): Show a0001c0001t0001g0109 a0001c0001t0015g0162 a0001c0001t0025g0202 a0001c0001t0039g0186 a0001c0001t0057g0082 a0001c0001t0069g0065	6	66	0.0909	9	c.745 others(28): Show c.745+34399_745+34407dupAAAAAAAAA		FOXN3	ENSG00000053254.16	transcript	ENST00000557258.6	protein_coding	4/5						chr14	TogoVar
FOXN3_chr14_89151177_89422233	89312284	C C	CAAAAAAA others(2): Show CAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00544.hp2 HG00609.hp2 HG00639.hp2 others(27): Show HG00544.hp2 HG00609.hp2 HG00639.hp2 HG01109.hp2 HG01517.hp1 HG01978.hp1 HG02040.hp1 HG02109.hp1 HG02135.hp2 HG02486.hp1 HG02559.hp1 HG02622.hp1 HG02809.hp2 HG02818.hp2 HG02886.hp2 HG02922.hp1 HG02965.hp2 HG03041.hp2 HG03225.hp1 HG06807.hp1 NA18947.hp1 NA18950.hp1 NA18950.hp2 NA18965.hp2 NA18967.hp2 NA18985.hp2 NA18995.hp1 NA19060.hp2 NA19068.hp2 NA19088.hp1	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(17): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0008 a0001c0001t0011 a0001c0001t0015 a0001c0001t0020 a0001c0001t0027 a0001c0001t0029 a0001c0001t0033 a0001c0001t0034 a0001c0001t0040 a0001c0001t0049 a0001c0001t0050 a0001c0001t0057 a0001c0001t0068 a0001c0001t0080 a0001c0004t0032	a0001c0001t0001g0101 a0001c0001t0001g0118 a0001c0001t0001g0131 others(27): Show a0001c0001t0001g0101 a0001c0001t0001g0118 a0001c0001t0001g0131 a0001c0001t0001g0207 a0001c0001t0001g0227 a0001c0001t0002g0037 a0001c0001t0002g0099 a0001c0001t0002g0205 a0001c0001t0003g0175 a0001c0001t0003g0179 a0001c0001t0003g0188 a0001c0001t0004g0132 a0001c0001t0005g0191 a0001c0001t0005g0196 a0001c0001t0008g0019 a0001c0001t0011g0133 a0001c0001t0011g0143 a0001c0001t0015g0083 a0001c0001t0020g0017 a0001c0001t0027g0002 a0001c0001t0029g0008 a0001c0001t0033g0009 a0001c0001t0034g0012 a0001c0001t0040g0226 a0001c0001t0049g0230 a0001c0001t0050g0177 a0001c0001t0057g0082 a0001c0001t0068g0098 a0001c0001t0080g0155 a0001c0004t0032g0013	30	93	0.3226	9	c.681 others(28): Show c.681-31279_681-31271dupTTTTTTTTT		FOXN3	ENSG00000053254.16	transcript	ENST00000557258.6	protein_coding	3/5						chr14	TogoVar
FOXN3_chr14_89151177_89422233	89325214	G G	GCACCACC others(2): Show GCACCACCAC	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00140.hp2 HG00423.hp1 others(119): Show HG00140.hp1 HG00140.hp2 HG00423.hp1 HG00544.hp1 HG00558.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00639.hp2 HG00673.hp1 HG00738.hp2 HG00741.hp2 HG01070.hp2 HG01081.hp2 HG01106.hp1 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01175.hp2 HG01192.hp1 HG01243.hp1 HG01255.hp2 HG01346.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01934.hp2 HG01975.hp1 HG01993.hp2 HG02055.hp1 HG02056.hp2 HG02109.hp2 HG02135.hp2 HG02145.hp1 HG02155.hp1 HG02155.hp2 HG02257.hp1 HG02273.hp1 HG02300.hp1 HG02300.hp2 HG02451.hp2 HG02559.hp1 HG02559.hp2 HG02602.hp1 HG02683.hp1 HG02683.hp2 HG02723.hp2 HG02738.hp1 HG02809.hp2 HG02818.hp1 HG02886.hp1 HG02895.hp1 HG02895.hp2 HG02897.hp1 HG02897.hp2 HG02965.hp1 HG03017.hp1 HG03041.hp1 HG03041.hp2 HG03139.hp2 HG03195.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp1 HG03453.hp1 HG03471.hp1 HG03471.hp2 HG03492.hp2 HG03516.hp1 HG03540.hp1 HG03540.hp2 HG03669.hp2 HG03688.hp1 HG03704.hp1 HG03834.hp1 HG03834.hp2 HG04184.hp1 HG04228.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18747.hp2 NA18906.hp1 NA18906.hp2 NA18942.hp2 NA18945.hp2 NA18946.hp2 NA18947.hp1 NA18950.hp1 NA18959.hp1 NA18959.hp2 NA18960.hp2 NA18964.hp1 NA18965.hp2 NA18967.hp1 NA18967.hp2 NA18968.hp2 NA18969.hp1 NA18969.hp2 NA18971.hp2 NA18983.hp2 NA18985.hp2 NA18995.hp2 NA18997.hp1 NA18997.hp2 NA18999.hp1 NA19009.hp2 NA19043.hp2 NA19060.hp2 NA19065.hp2 NA19068.hp2 NA19078.hp2 NA19088.hp1 NA19240.hp2 NA20300.hp1 NA20300.hp2 NA20805.hp1 NA20905.hp1 NA20905.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(1): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(58): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 a0001c0001t0012 a0001c0001t0013 a0001c0001t0014 a0001c0001t0015 a0001c0001t0016 a0001c0001t0017 a0001c0001t0019 a0001c0001t0020 a0001c0001t0021 a0001c0001t0023 a0001c0001t0024 a0001c0001t0025 a0001c0001t0026 a0001c0001t0028 a0001c0001t0031 a0001c0001t0033 a0001c0001t0035 a0001c0001t0036 a0001c0001t0038 a0001c0001t0039 a0001c0001t0040 a0001c0001t0042 a0001c0001t0043 a0001c0001t0045 a0001c0001t0047 a0001c0001t0048 a0001c0001t0054 a0001c0001t0055 a0001c0001t0056 a0001c0001t0057 a0001c0001t0058 a0001c0001t0060 a0001c0001t0063 a0001c0001t0064 a0001c0001t0065 a0001c0001t0066 a0001c0001t0067 a0001c0001t0069 a0001c0001t0072 a0001c0001t0073 a0001c0001t0074 a0001c0001t0077 a0001c0001t0079 a0001c0002t0009 a0001c0002t0010 a0001c0002t0014 a0001c0002t0022 a0001c0002t0061 a0001c0003t0001 a0001c0004t0032	a0001c0001t0001g0023 a0001c0001t0001g0035 a0001c0001t0001g0039 others(119): Show a0001c0001t0001g0023 a0001c0001t0001g0035 a0001c0001t0001g0039 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0058 a0001c0001t0001g0064 a0001c0001t0001g0072 a0001c0001t0001g0081 a0001c0001t0001g0101 a0001c0001t0001g0109 a0001c0001t0001g0122 a0001c0001t0001g0131 a0001c0001t0001g0136 a0001c0001t0001g0166 a0001c0001t0001g0207 a0001c0001t0001g0212 a0001c0001t0001g0214 a0001c0001t0001g0218 a0001c0001t0001g0220 a0001c0001t0002g0036 a0001c0001t0002g0037 a0001c0001t0002g0059 a0001c0001t0002g0061 a0001c0001t0002g0070 a0001c0001t0002g0075 a0001c0001t0002g0080 a0001c0001t0002g0090 a0001c0001t0002g0096 a0001c0001t0002g0099 a0001c0001t0002g0107 a0001c0001t0002g0124 a0001c0001t0002g0147 a0001c0001t0002g0151 a0001c0001t0002g0205 a0001c0001t0003g0106 a0001c0001t0003g0175 a0001c0001t0003g0176 a0001c0001t0003g0179 a0001c0001t0004g0029 a0001c0001t0004g0069 a0001c0001t0004g0132 a0001c0001t0004g0194 a0001c0001t0005g0066 a0001c0001t0005g0074 a0001c0001t0005g0191 a0001c0001t0006g0071 a0001c0001t0006g0078 a0001c0001t0006g0219 a0001c0001t0007g0022 a0001c0001t0007g0032 a0001c0001t0008g0216 a0001c0001t0009g0040 a0001c0001t0009g0077 a0001c0001t0009g0210 a0001c0001t0010g0180 a0001c0001t0010g0181 a0001c0001t0010g0183 a0001c0001t0010g0209 a0001c0001t0011g0033 a0001c0001t0011g0057 a0001c0001t0011g0133 a0001c0001t0011g0143 a0001c0001t0012g0117 a0001c0001t0012g0140 a0001c0001t0012g0206 a0001c0001t0013g0062 a0001c0001t0014g0105 a0001c0001t0015g0162 a0001c0001t0015g0222 a0001c0001t0016g0001 a0001c0001t0016g0004 a0001c0001t0017g0005 a0001c0001t0019g0025 a0001c0001t0019g0042 a0001c0001t0020g0017 a0001c0001t0021g0051 a0001c0001t0023g0201 a0001c0001t0024g0015 a0001c0001t0024g0200 a0001c0001t0025g0202 a0001c0001t0026g0007 a0001c0001t0028g0006 a0001c0001t0031g0010 a0001c0001t0033g0009 a0001c0001t0035g0223 a0001c0001t0036g0184 a0001c0001t0038g0224 a0001c0001t0039g0186 a0001c0001t0040g0226 a0001c0001t0042g0182 a0001c0001t0043g0152 a0001c0001t0045g0203 a0001c0001t0047g0211 a0001c0001t0048g0038 a0001c0001t0054g0068 a0001c0001t0055g0100 a0001c0001t0056g0018 a0001c0001t0057g0082 a0001c0001t0058g0163 a0001c0001t0060g0187 a0001c0001t0063g0067 a0001c0001t0064g0076 a0001c0001t0065g0160 a0001c0001t0066g0047 a0001c0001t0067g0034 a0001c0001t0069g0065 a0001c0001t0072g0169 a0001c0001t0073g0115 a0001c0001t0074g0073 a0001c0001t0077g0167 a0001c0001t0079g0170 a0001c0002t0009g0110 a0001c0002t0010g0111 a0001c0002t0014g0113 a0001c0002t0022g0112 a0001c0002t0061g0114 a0001c0003t0001g0054 a0001c0003t0001g0137 a0001c0004t0032g0013	122	152	0.8026	9	c.680 others(28): Show c.680+25449_680+25457dupGTGGTGGTG		FOXN3	ENSG00000053254.16	transcript	ENST00000557258.6	protein_coding	3/5						chr14	TogoVar
FOXN3_chr14_89151177_89422233	89360891	A A	ACCACCAC others(2): Show ACCACCACCT	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG01517.hp2 HG02071.hp1 others(1): Show HG00738.hp1 HG01517.hp2 HG02071.hp1 HG03017.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0007 a0001c0001t0014 a0001c0001t0002 a0001c0001t0007 a0001c0001t0014	a0001c0001t0002g0151 a0001c0001t0007g0089 a0001c0001t0014g0091 others(1): Show a0001c0001t0002g0151 a0001c0001t0007g0089 a0001c0001t0014g0091 a0001c0001t0014g0105	4	176	0.0227	9	c.544 others(28): Show c.544-10084_544-10083insAGGTGGTGG		FOXN3	ENSG00000053254.16	transcript	ENST00000557258.6	protein_coding	2/5						chr14	TogoVar
FOXN3_chr14_89151177_89422233	89360891	A A	AGCACCAC others(2): Show AGCACCACCT	intron_variant intron_variant	MODIFIER	NA18942.hp1 NA18943.hp2 NA18968.hp1 others(1): Show NA18942.hp1 NA18943.hp2 NA18968.hp1 NA19060.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0008 a0001c0001t0033 others(1): Show a0001c0001t0005 a0001c0001t0008 a0001c0001t0033 a0001c0001t0059	a0001c0001t0005g0087 a0001c0001t0008g0021 a0001c0001t0033g0009 others(1): Show a0001c0001t0005g0087 a0001c0001t0008g0021 a0001c0001t0033g0009 a0001c0001t0059g0055	4	176	0.0227	9	c.544 others(28): Show c.544-10084_544-10083insAGGTGGTGC		FOXN3	ENSG00000053254.16	transcript	ENST00000557258.6	protein_coding	2/5						chr14	TogoVar
FOXN3_chr14_89151177_89422233	89360903	T T	TCCAGCAC others(2): Show TCCAGCACCA	intron_variant intron_variant	MODIFIER	HG00544.hp2 HG00642.hp1 HG02257.hp1 others(5): Show HG00544.hp2 HG00642.hp1 HG02257.hp1 NA18612.hp2 NA18964.hp2 NA18965.hp1 NA18995.hp1 NA19068.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0007 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0007 a0001c0001t0008 a0001c0001t0011 a0001c0001t0019 a0001c0001t0041	a0001c0001t0001g0227 a0001c0001t0002g0228 a0001c0001t0007g0022 others(5): Show a0001c0001t0001g0227 a0001c0001t0002g0228 a0001c0001t0007g0022 a0001c0001t0008g0019 a0001c0001t0008g0148 a0001c0001t0011g0133 a0001c0001t0019g0042 a0001c0001t0041g0126	8	180	0.0444	9	c.544 others(28): Show c.544-10096_544-10095insTGGTGCTGG		FOXN3	ENSG00000053254.16	transcript	ENST00000557258.6	protein_coding	2/5						chr14	TogoVar
FOXN3_chr14_89151177_89422233	89360906	A A	AGCACCAC others(2): Show AGCACCACCT	intron_variant intron_variant	MODIFIER	HG03704.hp2 NA18960.hp1 HG03704.hp2 NA18960.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0018 a0001c0001t0001 a0001c0001t0018	a0001c0001t0001g0142 a0001c0001t0018g0198 a0001c0001t0001g0142 a0001c0001t0018g0198	2	221	0.0090	9	c.544 others(28): Show c.544-10099_544-10098insAGGTGGTGC		FOXN3	ENSG00000053254.16	transcript	ENST00000557258.6	protein_coding	2/5						chr14	TogoVar
FOXN3_chr14_89151177_89422233	89360933	A A	ACCACCAC others(2): Show ACCACCACCT	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG03139.hp1 NA18950.hp2 others(2): Show HG02109.hp2 HG03139.hp1 NA18950.hp2 NA19088.hp1 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0011 a0001c0001t0034 others(1): Show a0001c0001t0003 a0001c0001t0011 a0001c0001t0034 a0001c0001t0072	a0001c0001t0003g0106 a0001c0001t0003g0153 a0001c0001t0011g0143 others(2): Show a0001c0001t0003g0106 a0001c0001t0003g0153 a0001c0001t0011g0143 a0001c0001t0034g0012 a0001c0001t0072g0169	5	195	0.0256	9	c.544 others(28): Show c.544-10126_544-10125insAGGTGGTGG		FOXN3	ENSG00000053254.16	transcript	ENST00000557258.6	protein_coding	2/5						chr14	TogoVar
FOXN3_chr14_89151177_89422233	89360933	A A	AGCACCAC others(2): Show AGCACCACCT	intron_variant intron_variant	MODIFIER	HG00639.hp2 NA18960.hp1 NA18998.hp2 HG00639.hp2 NA18960.hp1 NA18998.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0007 a0001c0001t0018 a0001c0001t0001 a0001c0001t0007 a0001c0001t0018	a0001c0001t0001g0101 a0001c0001t0007g0027 a0001c0001t0018g0198 a0001c0001t0001g0101 a0001c0001t0007g0027 a0001c0001t0018g0198	3	193	0.0155	9	c.544 others(28): Show c.544-10126_544-10125insAGGTGGTGC		FOXN3	ENSG00000053254.16	transcript	ENST00000557258.6	protein_coding	2/5						chr14	TogoVar
FOXN3_chr14_89151177_89422233	89360952	C C	CCACCTCC others(2): Show CCACCTCCAG	intron_variant intron_variant	MODIFIER	HG01255.hp1 HG02257.hp1 HG02273.hp2 others(1): Show HG01255.hp1 HG02257.hp1 HG02273.hp2 HG03225.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0001t0004 a0001c0001t0019 others(1): Show a0001c0001t0002 a0001c0001t0004 a0001c0001t0019 a0001c0002t0022	a0001c0001t0002g0144 a0001c0001t0004g0141 a0001c0001t0019g0042 others(1): Show a0001c0001t0002g0144 a0001c0001t0004g0141 a0001c0001t0019g0042 a0001c0002t0022g0112	4	210	0.0190	9	c.544 others(28): Show c.544-10145_544-10144insCTGGAGGTG		FOXN3	ENSG00000053254.16	transcript	ENST00000557258.6	protein_coding	2/5						chr14	TogoVar
FOXN3_chr14_89151177_89422233	89361218	A A	AGCACCAC others(2): Show AGCACCACCT	intron_variant intron_variant	MODIFIER	HG02056.hp1 HG02135.hp1 HG02683.hp2 others(1): Show HG02056.hp1 HG02135.hp1 HG02683.hp2 HG03139.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 others(1): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 a0001c0001t0046	a0001c0001t0001g0023 a0001c0001t0003g0153 a0001c0001t0005g0103 others(1): Show a0001c0001t0001g0023 a0001c0001t0003g0153 a0001c0001t0005g0103 a0001c0001t0046g0116	4	173	0.0231	9	c.544 others(28): Show c.544-10411_544-10410insAGGTGGTGC		FOXN3	ENSG00000053254.16	transcript	ENST00000557258.6	protein_coding	2/5						chr14	TogoVar
FOXN3_chr14_89151177_89422233	89361230	T T	TCCAGCAC others(2): Show TCCAGCACCA	intron_variant intron_variant	MODIFIER	HG00673.hp2 HG01255.hp1 HG02273.hp2 others(1): Show HG00673.hp2 HG01255.hp1 HG02273.hp2 NA18942.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0004 a0001c0001t0007 others(1): Show a0001c0001t0002 a0001c0001t0004 a0001c0001t0007 a0001c0001t0008	a0001c0001t0002g0144 a0001c0001t0004g0141 a0001c0001t0007g0050 others(1): Show a0001c0001t0002g0144 a0001c0001t0004g0141 a0001c0001t0007g0050 a0001c0001t0008g0021	4	200	0.0200	9	c.544 others(28): Show c.544-10423_544-10422insTGGTGCTGG		FOXN3	ENSG00000053254.16	transcript	ENST00000557258.6	protein_coding	2/5						chr14	TogoVar
FOXN3_chr14_89151177_89422233	89361233	A A	AGCACCAC others(2): Show AGCACCACCT	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG02071.hp1 HG02486.hp2 others(2): Show HG00639.hp2 HG02071.hp1 HG02486.hp2 HG02886.hp2 HG02965.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0007 others(2): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0007 a0001c0001t0015 a0001c0001t0049	a0001c0001t0001g0101 a0001c0001t0004g0016 a0001c0001t0007g0089 others(2): Show a0001c0001t0001g0101 a0001c0001t0004g0016 a0001c0001t0007g0089 a0001c0001t0015g0083 a0001c0001t0049g0230	5	220	0.0227	9	c.544 others(28): Show c.544-10426_544-10425insAGGTGGTGC		FOXN3	ENSG00000053254.16	transcript	ENST00000557258.6	protein_coding	2/5						chr14	TogoVar
FOXN3_chr14_89151177_89422233	89361260	A A	ACCACCAC others(2): Show ACCACCACCT	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00423.hp2 HG00741.hp2 others(1): Show HG00140.hp1 HG00423.hp2 HG00741.hp2 HG03195.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0006 a0001c0001t0001 a0001c0001t0004 a0001c0001t0006	a0001c0001t0001g0058 a0001c0001t0001g0136 a0001c0001t0004g0229 others(1): Show a0001c0001t0001g0058 a0001c0001t0001g0136 a0001c0001t0004g0229 a0001c0001t0006g0193	4	211	0.0190	9	c.544 others(28): Show c.544-10453_544-10452insAGGTGGTGG		FOXN3	ENSG00000053254.16	transcript	ENST00000557258.6	protein_coding	2/5						chr14	TogoVar
FOXN3_chr14_89151177_89422233	89361268	C C	CTCCACCA others(2): Show CTCCACCACT	intron_variant intron_variant	MODIFIER	NA18950.hp2 NA19078.hp2 NA20805.hp1 NA18950.hp2 NA19078.hp2 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0034 a0001c0001t0066 a0001c0001t0003 a0001c0001t0034 a0001c0001t0066	a0001c0001t0003g0106 a0001c0001t0034g0012 a0001c0001t0066g0047 a0001c0001t0003g0106 a0001c0001t0034g0012 a0001c0001t0066g0047	3	224	0.0134	9	c.544 others(28): Show c.544-10461_544-10460insAGTGGTGGA		FOXN3	ENSG00000053254.16	transcript	ENST00000557258.6	protein_coding	2/5						chr14	TogoVar
FOXN3_chr14_89151177_89422233	89361271	C C	CTCCAGCA others(2): Show CTCCAGCACT	intron_variant intron_variant	MODIFIER	NA18906.hp1 NA19007.hp2 NA18906.hp1 NA19007.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0023 a0001c0001t0001 a0001c0001t0023	a0001c0001t0001g0020 a0001c0001t0023g0201 a0001c0001t0001g0020 a0001c0001t0023g0201	2	225	0.0089	9	c.544 others(28): Show c.544-10464_544-10463insAGTGCTGGA		FOXN3	ENSG00000053254.16	transcript	ENST00000557258.6	protein_coding	2/5						chr14	TogoVar
FOXN3_chr14_89151177_89422233	89361410	A A	AGCACCAC others(2): Show AGCACCACCT	intron_variant intron_variant	MODIFIER	HG03239.hp1 HG03492.hp2 NA19088.hp1 HG03239.hp1 HG03492.hp2 NA19088.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0011 a0001c0001t0024 a0001c0001t0001 a0001c0001t0011 a0001c0001t0024	a0001c0001t0001g0035 a0001c0001t0011g0143 a0001c0001t0024g0200 a0001c0001t0001g0035 a0001c0001t0011g0143 a0001c0001t0024g0200	3	202	0.0149	9	c.544 others(28): Show c.544-10603_544-10602insAGGTGGTGC		FOXN3	ENSG00000053254.16	transcript	ENST00000557258.6	protein_coding	2/5						chr14	TogoVar
FOXN3_chr14_89151177_89422233	89361414	C C	CCACCTCC others(2): Show CCACCTCCAG	intron_variant intron_variant	MODIFIER	HG02738.hp2 NA18612.hp2 NA18942.hp1 others(3): Show HG02738.hp2 NA18612.hp2 NA18942.hp1 NA18960.hp1 NA18965.hp1 NA18983.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0007 a0001c0001t0008 others(1): Show a0001c0001t0001 a0001c0001t0007 a0001c0001t0008 a0001c0001t0018	a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0007g0022 others(3): Show a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0007g0022 a0001c0001t0008g0021 a0001c0001t0008g0148 a0001c0001t0018g0198	6	206	0.0291	9	c.544 others(28): Show c.544-10607_544-10606insCTGGAGGTG		FOXN3	ENSG00000053254.16	transcript	ENST00000557258.6	protein_coding	2/5						chr14	TogoVar
FOXN3_chr14_89151177_89422233	89361547	G G	GCACCACC others(2): Show GCACCACCAC	intron_variant intron_variant	MODIFIER	HG02886.hp2 HG02965.hp2 HG02886.hp2 HG02965.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0015 a0001c0001t0049 a0001c0001t0015 a0001c0001t0049	a0001c0001t0015g0083 a0001c0001t0049g0230 a0001c0001t0015g0083 a0001c0001t0049g0230	2	135	0.0148	9	c.544 others(28): Show c.544-10740_544-10739insGTGGTGGTG		FOXN3	ENSG00000053254.16	transcript	ENST00000557258.6	protein_coding	2/5						chr14	TogoVar
FOXN3_chr14_89151177_89422233	89361664	G G	GCACCACC others(2): Show GCACCACCAC	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG02886.hp2 HG02965.hp2 HG02622.hp1 HG02886.hp2 HG02965.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0015 a0001c0001t0029 a0001c0001t0049 a0001c0001t0015 a0001c0001t0029 a0001c0001t0049	a0001c0001t0015g0083 a0001c0001t0029g0008 a0001c0001t0049g0230 a0001c0001t0015g0083 a0001c0001t0029g0008 a0001c0001t0049g0230	3	133	0.0226	9	c.544 others(28): Show c.544-10857_544-10856insGTGGTGGTG		FOXN3	ENSG00000053254.16	transcript	ENST00000557258.6	protein_coding	2/5						chr14	TogoVar
FOXN3_chr14_89151177_89422233	89361699	A A	AGCACCAC others(2): Show AGCACCACCT	intron_variant intron_variant	MODIFIER	HG01070.hp2 NA19068.hp2 NA20805.hp1 HG01070.hp2 NA19068.hp2 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0011 a0001c0001t0002 a0001c0001t0003 a0001c0001t0011	a0001c0001t0002g0090 a0001c0001t0003g0106 a0001c0001t0011g0133 a0001c0001t0002g0090 a0001c0001t0003g0106 a0001c0001t0011g0133	3	220	0.0136	9	c.544 others(28): Show c.544-10892_544-10891insAGGTGGTGC		FOXN3	ENSG00000053254.16	transcript	ENST00000557258.6	protein_coding	2/5						chr14	TogoVar
FOXN3_chr14_89151177_89422233	89361781	G G	GCACCACC others(2): Show GCACCACCTC	intron_variant intron_variant	MODIFIER	HG00558.hp2 HG01070.hp1 HG01175.hp1 others(8): Show HG00558.hp2 HG01070.hp1 HG01175.hp1 HG02071.hp1 HG02165.hp2 HG02602.hp2 HG03195.hp1 NA18943.hp2 NA19009.hp1 NA19043.hp1 NA19068.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(6): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 a0001c0001t0007 a0001c0001t0008 a0001c0001t0011 a0001c0001t0044 a0001c0001t0078	a0001c0001t0001g0119 a0001c0001t0001g0199 a0001c0001t0002g0145 others(8): Show a0001c0001t0001g0119 a0001c0001t0001g0199 a0001c0001t0002g0145 a0001c0001t0004g0208 a0001c0001t0004g0229 a0001c0001t0005g0087 a0001c0001t0007g0089 a0001c0001t0008g0053 a0001c0001t0011g0133 a0001c0001t0044g0030 a0001c0001t0078g0095	11	110	0.1000	9	c.544 others(28): Show c.544-10974_544-10973insGAGGTGGTG		FOXN3	ENSG00000053254.16	transcript	ENST00000557258.6	protein_coding	2/5						chr14	TogoVar
FOXN3_chr14_89151177_89422233	89361795	A A	AGCACCAC others(2): Show AGCACCACCT	intron_variant intron_variant	MODIFIER	HG01346.hp2 NA18969.hp1 NA18998.hp1 HG01346.hp2 NA18969.hp1 NA18998.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0007 a0001c0001t0009 a0001c0001t0002 a0001c0001t0007 a0001c0001t0009	a0001c0001t0002g0075 a0001c0001t0007g0139 a0001c0001t0009g0077 a0001c0001t0002g0075 a0001c0001t0007g0139 a0001c0001t0009g0077	3	219	0.0137	9	c.544 others(28): Show c.544-10988_544-10987insAGGTGGTGC		FOXN3	ENSG00000053254.16	transcript	ENST00000557258.6	protein_coding	2/5						chr14	TogoVar
FOXN3_chr14_89151177_89422233	89361916	G G	GCACCACC others(2): Show GCACCACCTC	intron_variant intron_variant	MODIFIER	HG01517.hp1 HG02559.hp1 HG01517.hp1 HG02559.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0057 a0001c0001t0002 a0001c0001t0057	a0001c0001t0002g0099 a0001c0001t0057g0082 a0001c0001t0002g0099 a0001c0001t0057g0082	2	110	0.0182	9	c.544 others(28): Show c.544-11109_544-11108insGAGGTGGTG		FOXN3	ENSG00000053254.16	transcript	ENST00000557258.6	protein_coding	2/5						chr14	TogoVar
FOXN3_chr14_89151177_89422233	89362020	A A	AGCACCAC others(2): Show AGCACCACCT	intron_variant intron_variant	MODIFIER	HG02886.hp2 HG02965.hp2 NA18968.hp2 HG02886.hp2 HG02965.hp2 NA18968.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0015 a0001c0001t0049 a0001c0001t0001 a0001c0001t0015 a0001c0001t0049	a0001c0001t0001g0220 a0001c0001t0015g0083 a0001c0001t0049g0230 a0001c0001t0001g0220 a0001c0001t0015g0083 a0001c0001t0049g0230	3	210	0.0143	9	c.544 others(28): Show c.544-11213_544-11212insAGGTGGTGC		FOXN3	ENSG00000053254.16	transcript	ENST00000557258.6	protein_coding	2/5						chr14	TogoVar
FOXN3_chr14_89151177_89422233	89362171	G G	GCACCACC others(2): Show GCACCACCTC	intron_variant intron_variant	MODIFIER	HG01346.hp2 HG01993.hp2 NA20300.hp1 HG01346.hp2 HG01993.hp2 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0004 a0001c0001t0069 a0001c0001t0002 a0001c0001t0004 a0001c0001t0069	a0001c0001t0002g0075 a0001c0001t0004g0069 a0001c0001t0069g0065 a0001c0001t0002g0075 a0001c0001t0004g0069 a0001c0001t0069g0065	3	168	0.0179	9	c.544 others(28): Show c.544-11372_544-11364dupGAGGTGGTG		FOXN3	ENSG00000053254.16	transcript	ENST00000557258.6	protein_coding	2/5						chr14	TogoVar
FOXN3_chr14_89151177_89422233	89362213	C C	CCACCTCC others(2): Show CCACCTCCAG	intron_variant intron_variant	MODIFIER	HG03017.hp1 HG03239.hp1 HG03492.hp2 others(1): Show HG03017.hp1 HG03239.hp1 HG03492.hp2 NA19088.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0011 a0001c0001t0014 others(1): Show a0001c0001t0001 a0001c0001t0011 a0001c0001t0014 a0001c0001t0024	a0001c0001t0001g0035 a0001c0001t0011g0143 a0001c0001t0014g0105 others(1): Show a0001c0001t0001g0035 a0001c0001t0011g0143 a0001c0001t0014g0105 a0001c0001t0024g0200	4	222	0.0180	9	c.544 others(28): Show c.544-11406_544-11405insCTGGAGGTG		FOXN3	ENSG00000053254.16	transcript	ENST00000557258.6	protein_coding	2/5						chr14	TogoVar
FOXN3_chr14_89151177_89422233	89362252	G G	GCACTACC others(2): Show GCACTACCTC	intron_variant intron_variant	MODIFIER	HG03704.hp2 NA18906.hp1 NA18968.hp2 others(1): Show HG03704.hp2 NA18906.hp1 NA18968.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0023 a0001c0001t0025 a0001c0001t0001 a0001c0001t0023 a0001c0001t0025	a0001c0001t0001g0142 a0001c0001t0001g0220 a0001c0001t0023g0201 others(1): Show a0001c0001t0001g0142 a0001c0001t0001g0220 a0001c0001t0023g0201 a0001c0001t0025g0202	4	169	0.0237	9	c.544 others(28): Show c.544-11445_544-11444insGAGGTAGTG		FOXN3	ENSG00000053254.16	transcript	ENST00000557258.6	protein_coding	2/5						chr14	TogoVar
FOXN3_chr14_89151177_89422233	89362286	C C	CTCCAGCA others(2): Show CTCCAGCACT	intron_variant intron_variant	MODIFIER	HG02273.hp2 NA18980.hp2 HG02273.hp2 NA18980.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0005 a0001c0001t0002 a0001c0001t0005	a0001c0001t0002g0144 a0001c0001t0005g0149 a0001c0001t0002g0144 a0001c0001t0005g0149	2	218	0.0092	9	c.544 others(28): Show c.544-11479_544-11478insAGTGCTGGA		FOXN3	ENSG00000053254.16	transcript	ENST00000557258.6	protein_coding	2/5						chr14	TogoVar
FOXN3_chr14_89151177_89422233	89362342	G G	GCACTACC others(2): Show GCACTACCTC	intron_variant intron_variant	MODIFIER	HG01255.hp1 HG01978.hp1 HG02273.hp2 others(2): Show HG01255.hp1 HG01978.hp1 HG02273.hp2 HG03704.hp2 NA18980.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0005	a0001c0001t0001g0118 a0001c0001t0001g0142 a0001c0001t0002g0144 others(2): Show a0001c0001t0001g0118 a0001c0001t0001g0142 a0001c0001t0002g0144 a0001c0001t0004g0141 a0001c0001t0005g0149	5	188	0.0266	9	c.544 others(28): Show c.544-11535_544-11534insGAGGTAGTG		FOXN3	ENSG00000053254.16	transcript	ENST00000557258.6	protein_coding	2/5						chr14	TogoVar
FOXN3_chr14_89151177_89422233	89362356	T T	TCCACCAC others(2): Show TCCACCACCA	intron_variant intron_variant	MODIFIER	HG02895.hp1 HG02897.hp1 HG03195.hp1 others(2): Show HG02895.hp1 HG02897.hp1 HG03195.hp1 NA19043.hp1 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0010 a0001c0001t0035 others(1): Show a0001c0001t0004 a0001c0001t0010 a0001c0001t0035 a0001c0001t0078	a0001c0001t0004g0229 a0001c0001t0010g0180 a0001c0001t0010g0181 others(2): Show a0001c0001t0004g0229 a0001c0001t0010g0180 a0001c0001t0010g0181 a0001c0001t0035g0223 a0001c0001t0078g0095	5	159	0.0314	9	c.544 others(28): Show c.544-11549_544-11548insTGGTGGTGG		FOXN3	ENSG00000053254.16	transcript	ENST00000557258.6	protein_coding	2/5						chr14	TogoVar
FOXN3_chr14_89151177_89422233	89362432	C C	CCACCTCC others(2): Show CCACCTCCAG	intron_variant intron_variant	MODIFIER	HG01346.hp2 HG01993.hp2 NA18947.hp1 others(1): Show HG01346.hp2 HG01993.hp2 NA18947.hp1 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0004 a0001c0001t0069 a0001c0001t0002 a0001c0001t0004 a0001c0001t0069	a0001c0001t0002g0075 a0001c0001t0002g0205 a0001c0001t0004g0069 others(1): Show a0001c0001t0002g0075 a0001c0001t0002g0205 a0001c0001t0004g0069 a0001c0001t0069g0065	4	226	0.0177	9	c.544 others(28): Show c.544-11625_544-11624insCTGGAGGTG		FOXN3	ENSG00000053254.16	transcript	ENST00000557258.6	protein_coding	2/5						chr14	TogoVar
FOXN3_chr14_89151177_89422233	89362496	C C	CTCCAGCA others(2): Show CTCCAGCACT	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG02738.hp2 NA18964.hp2 others(2): Show HG00642.hp1 HG02738.hp2 NA18964.hp2 NA18995.hp1 NA18998.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0007 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0007 a0001c0001t0041	a0001c0001t0001g0120 a0001c0001t0001g0227 a0001c0001t0002g0228 others(2): Show a0001c0001t0001g0120 a0001c0001t0001g0227 a0001c0001t0002g0228 a0001c0001t0007g0139 a0001c0001t0041g0126	5	222	0.0225	9	c.544 others(28): Show c.544-11689_544-11688insAGTGCTGGA		FOXN3	ENSG00000053254.16	transcript	ENST00000557258.6	protein_coding	2/5						chr14	TogoVar
FOXN3_chr14_89151177_89422233	89362683	T T	TCCACCAC others(2): Show TCCACCACCA	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG02723.hp1 HG03471.hp1 others(6): Show HG02559.hp1 HG02723.hp1 HG03471.hp1 HG03492.hp2 NA18747.hp1 NA18950.hp2 NA19060.hp2 NA19068.hp1 NA19088.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0008 a0001c0001t0011 others(6): Show a0001c0001t0001 a0001c0001t0008 a0001c0001t0011 a0001c0001t0023 a0001c0001t0024 a0001c0001t0033 a0001c0001t0034 a0001c0001t0055 a0001c0001t0057	a0001c0001t0001g0092 a0001c0001t0008g0079 a0001c0001t0011g0143 others(6): Show a0001c0001t0001g0092 a0001c0001t0008g0079 a0001c0001t0011g0143 a0001c0001t0023g0154 a0001c0001t0024g0200 a0001c0001t0033g0009 a0001c0001t0034g0012 a0001c0001t0055g0100 a0001c0001t0057g0082	9	174	0.0517	9	c.544 others(28): Show c.544-11884_544-11876dupTGGTGGTGG		FOXN3	ENSG00000053254.16	transcript	ENST00000557258.6	protein_coding	2/5						chr14	TogoVar
FOXN3_chr14_89151177_89422233	89362698	A A	ACCACCAT others(2): Show ACCACCATCT	intron_variant intron_variant	MODIFIER	HG01255.hp1 HG01978.hp1 HG02273.hp2 others(2): Show HG01255.hp1 HG01978.hp1 HG02273.hp2 HG03704.hp2 NA18980.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0005	a0001c0001t0001g0118 a0001c0001t0001g0142 a0001c0001t0002g0144 others(2): Show a0001c0001t0001g0118 a0001c0001t0001g0142 a0001c0001t0002g0144 a0001c0001t0004g0141 a0001c0001t0005g0149	5	153	0.0327	9	c.544 others(28): Show c.544-11891_544-11890insAGATGGTGG		FOXN3	ENSG00000053254.16	transcript	ENST00000557258.6	protein_coding	2/5						chr14	TogoVar
FOXN3_chr14_89151177_89422233	89385499	T T	TAAAAAAA others(2): Show TAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG02056.hp2 HG02300.hp2 others(4): Show HG00558.hp1 HG02056.hp2 HG02300.hp2 HG02738.hp1 NA18968.hp1 NA19078.hp1 NA19078.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0019 a0001c0001t0021 others(2): Show a0001c0001t0002 a0001c0001t0019 a0001c0001t0021 a0001c0001t0059 a0001c0001t0066	a0001c0001t0002g0036 a0001c0001t0002g0070 a0001c0001t0019g0025 others(4): Show a0001c0001t0002g0036 a0001c0001t0002g0070 a0001c0001t0019g0025 a0001c0001t0021g0028 a0001c0001t0021g0051 a0001c0001t0059g0055 a0001c0001t0066g0047	7	66	0.1061	9	c.543 others(28): Show c.543+26426_543+26434dupTTTTTTTTT		FOXN3	ENSG00000053254.16	transcript	ENST00000557258.6	protein_coding	2/5						chr14	TogoVar
FOXO3B_chr17_18662629_18687314	18673034	G G	GCGCCGCC others(2): Show GCGCCGCCGC	conservative_inframe_insertion conservative_inframe_insertion	MODERATE	HG02559.hp2 HG02615.hp2 HG03209.hp1 others(2): Show HG02559.hp2 HG02615.hp2 HG03209.hp1 HG03516.hp2 NA19240.hp2	a0009 a0009	a0009c0009 a0009c0015 a0009c0009 a0009c0015	a0009c0009t0012 a0009c0015t0028 a0009c0009t0012 a0009c0015t0028	a0009c0009t0012g0016 a0009c0015t0028g0080 a0009c0009t0012g0016 a0009c0015t0028g0080	5	454	0.0110	9	c.139 others(16): Show c.139_147dupGCGGCGGCG	p.Ala others(11): Show p.Ala47_Ala49dup	FOXO3B	ENSG00000240445.6	transcript	ENST00000395675.7	protein_coding	4/4	453/5859	147/873	49/290			chr17	TogoVar
FOXP1_chr3_70949708_71588728	71286301	G G	GTCCCCCG others(2): Show GTCCCCCGCC	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02976.hp2 NA21309.hp1 HG02257.hp2 HG02976.hp2 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0009 a0001c0001t0043 a0001c0001t0007 a0001c0001t0009 a0001c0001t0043	a0001c0001t0007g0070 a0001c0001t0009g0015 a0001c0001t0043g0054 a0001c0001t0007g0070 a0001c0001t0009g0015 a0001c0001t0043g0054	3	94	0.0319	9	c.-12 others(28): Show c.-12+13510_-12+13518dupGGCGGGGGA		FOXP1	ENSG00000114861.24	transcript	ENST00000649528.3	protein_coding	5/20						chr3	TogoVar

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