Joint Open Genome and Omics Platform (JoGo)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
LRIT3_chr4_109843107_109877315	109850422	C C	CCTTTCTT others(45): Show CCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC TTT	intron_variant intron_variant	MODIFIER	HG02647.hp2 HG02647.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0005 a0001c0004t0005	a0001c0004t0005g0194 a0001c0004t0005g0194	1	332	0.0030	52	c.117 others(69): Show c.117-1069_117-1018dupCTTTCTTTCTTTCTTTCTTTCTTTCTTT CTTTCTTTCTTTCTTTCTTTCTTT	LRIT3	ENSG00000183423.12	transcript	ENST00000594814.6	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr4	TogoVar
LRIT3_chr4_109843107_109877315	109850468	T T	TTTCTTTT others(45): Show TTTCTTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCT TTC	intron_variant intron_variant	MODIFIER	HG03834.hp2 HG03834.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0098 a0001c0002t0001g0098	1	332	0.0030	52	c.117 others(69): Show c.117-1030_117-1029insTCTTTCTTTCTCTTTCTTTCTTTCTTTC TTTCTTTCTCTTTCTTTCTTCTTT	LRIT3	ENSG00000183423.12	transcript	ENST00000594814.6	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr4	TogoVar
LRP1B_chr2_140226423_142136016	141544316	C C	CTTCTTCT others(45): Show CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTCTT CTT	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG02486.hp2	a0001 a0001	a0001c0024 a0001c0024	a0001c0024t0005 a0001c0024t0005	a0001c0024t0005g0009 a0001c0024t0005g0009	1	28	0.0357	52	c.206 others(71): Show c.206-63784_206-63783insAAGAAGAAAAGAAGAAGAAGAAGAAG AAGAAGAAGAAGAAGAAGAAGAAGAA	LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding	2/90			chr2	TogoVar
LRP1B_chr2_140226423_142136016	141544322	C C	CTTCTTCT others(45): Show CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTCTT CTT	intron_variant intron_variant	MODIFIER	HG02723.hp1 HG02723.hp1	a0001 a0001	a0001c0011 a0001c0011	a0001c0011t0001 a0001c0011t0001	a0001c0011t0001g0014 a0001c0011t0001g0014	1	28	0.0357	52	c.206 others(71): Show c.206-63790_206-63789insAAGAAGAAAAGAAGAAGAAGAAGAAG AAGAAGAAGAAGAAGAAGAAGAAGAA	LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding	2/90			chr2	TogoVar
LRP2BP_chr4_185358872_185400924	185375506	A A	ATATATAT others(45): Show ATATATATGTATATATATATGTGTATATATATATATATACGTATATATAT ATG	intron_variant intron_variant	MODIFIER	NA21309.hp1 NA21309.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0040 a0001c0003t0040	a0001c0003t0040g0013 a0001c0003t0040g0013	1	348	0.0029	52	c.330 others(67): Show c.330+106_330+107insCATATATATATACGTATATATATATATATA CACATATATATATACATATATA	LRP2BP	ENSG00000109771.16	transcript	ENST00000505916.6	protein_coding	4/8			chr4	TogoVar
LRP5_chr11_68307591_68454275	68390584	T T	TGCAGCCT others(45): Show TGCAGCCTCGCCCTGCCGCTGTGGTCGGGTTTCAGTGGCCTCGTCCCGTG GAC	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG03516.hp1 HG02258.hp2 HG03516.hp1	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0001 a0001c0005t0001	a0001c0005t0001g0109 a0001c0005t0001g0118 a0001c0005t0001g0109 a0001c0005t0001g0118	2	212	0.0094	52	c.158 others(69): Show c.1584+547_1584+548insCGCTGTGGTCGGGTTTCAGTGGCCTCGT CCCGTGGACGCAGCCTCGCCCTGC	LRP5	ENSG00000162337.12	transcript	ENST00000294304.12	protein_coding	7/22		INFO_REALIGN_3_PRIME	chr11	TogoVar
LRP5_chr11_68307591_68454275	68390600	T T	TGCTGTGG others(45): Show TGCTGTGGTCGGGTTTCAGTGGCCTCGTCCCGTGGACGCAGCCTCGCCCT GCC	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG01081.hp1 HG01109.hp1 others(61): Show HG00735.hp1 HG01081.hp1 HG01109.hp1 HG01109.hp2 HG01192.hp1 HG01243.hp1 HG01243.hp2 HG01256.hp1 HG01257.hp2 HG01258.hp2 HG01358.hp1 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01516.hp1 HG01884.hp2 HG01934.hp1 HG01978.hp1 HG02055.hp1 HG02145.hp2 HG02165.hp2 HG02280.hp1 HG02280.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp2 HG02615.hp1 HG02717.hp1 HG02723.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02897.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp2 HG03098.hp2 HG03130.hp1 HG03139.hp2 HG03195.hp1 HG03209.hp1 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp2 NA18906.hp1 NA18942.hp2 NA18945.hp2 NA18995.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19057.hp2 NA19091.hp2 NA20129.hp2 NA21309.hp1	a0001 a0002 a0003 others(4): Show a0001 a0002 a0003 a0005 a0006 a0012 a0019	a0001c0001 a0001c0002 a0001c0004 others(17): Show a0001c0001 a0001c0002 a0001c0004 a0001c0005 a0001c0007 a0001c0009 a0001c0013 a0001c0019 a0001c0026 a0001c0030 a0001c0039 a0002c0003 a0003c0006 a0003c0015 a0003c0016 a0003c0024 a0005c0010 a0006c0018 a0012c0036 a0019c0046	a0001c0001t0001 a0001c0002t0001 a0001c0004t0001 others(17): Show a0001c0001t0001 a0001c0002t0001 a0001c0004t0001 a0001c0005t0001 a0001c0007t0001 a0001c0009t0001 a0001c0013t0001 a0001c0019t0001 a0001c0026t0001 a0001c0030t0001 a0001c0039t0001 a0002c0003t0001 a0003c0006t0001 a0003c0015t0001 a0003c0016t0001 a0003c0024t0001 a0005c0010t0001 a0006c0018t0001 a0012c0036t0001 a0019c0046t0001	a0001c0001t0001g0039 a0001c0001t0001g0065 a0001c0001t0001g0110 others(61): Show a0001c0001t0001g0039 a0001c0001t0001g0065 a0001c0001t0001g0110 a0001c0001t0001g0149 a0001c0001t0001g0150 a0001c0001t0001g0205 a0001c0001t0001g0206 a0001c0001t0001g0207 a0001c0001t0001g0208 a0001c0001t0001g0211 a0001c0002t0001g0120 a0001c0002t0001g0125 a0001c0002t0001g0156 a0001c0002t0001g0157 a0001c0002t0001g0158 a0001c0002t0001g0159 a0001c0002t0001g0160 a0001c0002t0001g0161 a0001c0002t0001g0162 a0001c0002t0001g0163 a0001c0002t0001g0176 a0001c0002t0001g0204 a0001c0004t0001g0084 a0001c0004t0001g0086 a0001c0004t0001g0089 a0001c0004t0001g0108 a0001c0004t0001g0115 a0001c0004t0001g0119 a0001c0004t0001g0121 a0001c0004t0001g0123 a0001c0004t0001g0124 a0001c0005t0001g0212 a0001c0007t0001g0007 a0001c0009t0001g0042 a0001c0009t0001g0105 a0001c0013t0001g0055 a0001c0013t0001g0056 a0001c0013t0001g0194 a0001c0019t0001g0113 a0001c0019t0001g0114 a0001c0026t0001g0037 a0001c0030t0001g0117 a0001c0039t0001g0092 a0002c0003t0001g0038 a0002c0003t0001g0041 a0002c0003t0001g0044 a0002c0003t0001g0063 a0002c0003t0001g0111 a0003c0006t0001g0031 a0003c0006t0001g0032 a0003c0006t0001g0033 a0003c0006t0001g0034 a0003c0015t0001g0021 a0003c0015t0001g0022 a0003c0016t0001g0003 a0003c0024t0001g0018 a0005c0010t0001g0036 a0005c0010t0001g0040 a0005c0010t0001g0047 a0005c0010t0001g0148 a0006c0018t0001g0051 a0006c0018t0001g0052 a0012c0036t0001g0103 a0019c0046t0001g0140	64	212	0.3019	52	c.158 others(69): Show c.1584+630_1584+681dupCGTGGACGCAGCCTCGCCCTGCCGCTGT GGTCGGGTTTCAGTGGCCTCGTCC	LRP5	ENSG00000162337.12	transcript	ENST00000294304.12	protein_coding	7/22		INFO_REALIGN_3_PRIME	chr11	TogoVar
LRP5_chr11_68307591_68454275	68390683	G G	GTGGACGC others(45): Show GTGGACGCAGCCTCGCCCTGCCGCTGTGGTCGGGTTTCAGTGGCCTCGTC CCA	intron_variant intron_variant	MODIFIER	HG02896.hp1 HG02897.hp2 HG02896.hp1 HG02897.hp2	a0007 a0007	a0007c0017 a0007c0017	a0007c0017t0001 a0007c0017t0001	a0007c0017t0001g0106 a0007c0017t0001g0107 a0007c0017t0001g0106 a0007c0017t0001g0107	2	212	0.0094	52	c.158 others(69): Show c.1584+681_1584+682insCATGGACGCAGCCTCGCCCTGCCGCTGT GGTCGGGTTTCAGTGGCCTCGTCC	LRP5	ENSG00000162337.12	transcript	ENST00000294304.12	protein_coding	7/22		INFO_REALIGN_3_PRIME	chr11	TogoVar
LRP8_chr1_53237364_53333070	53283422	C C	CACTTACT others(45): Show CACTTACTTACTACATACCCGGGCCACTTACTTACTACATACCCGGGCCA CTT	intron_variant intron_variant	MODIFIER	HG03041.hp1 HG03041.hp1	a0001 a0001	a0001c0008 a0001c0008	a0001c0008t0001 a0001c0008t0001	a0001c0008t0001g0269 a0001c0008t0001g0269	1	296	0.0034	52	c.368 others(69): Show c.368-2759_368-2708dupAAGTGGCCCGGGTATGTAGTAAGTAAGT GGCCCGGGTATGTAGTAAGTAAGT	LRP8	ENSG00000157193.18	transcript	ENST00000306052.12	protein_coding	3/18			chr1	TogoVar
LRP8_chr1_53237364_53333070	53283522	C C	CACTTACT others(45): Show CACTTACTTACTTACTACATACCCGGGCCACTTACTTACTACATACCCGG GCC	intron_variant intron_variant	MODIFIER	NA18953.hp2 NA18981.hp1 NA18988.hp2 others(2): Show NA18953.hp2 NA18981.hp1 NA18988.hp2 NA19065.hp1 NA19091.hp1	a0002 a0005 a0002 a0005	a0002c0003 a0005c0030 a0002c0003 a0005c0030	a0002c0003t0003 a0005c0030t0003 a0002c0003t0003 a0005c0030t0003	a0002c0003t0003g0064 a0002c0003t0003g0065 a0002c0003t0003g0066 others(2): Show a0002c0003t0003g0064 a0002c0003t0003g0065 a0002c0003t0003g0066 a0002c0003t0003g0067 a0005c0030t0003g0275	5	296	0.0169	52	c.368 others(69): Show c.368-2808_368-2807insGGCCCGGGTATGTAGTAAGTAAGTGGCC CGGGTATGTAGTAAGTAAGTAAGT	LRP8	ENSG00000157193.18	transcript	ENST00000306052.12	protein_coding	3/18			chr1	TogoVar
LRP8_chr1_53237364_53333070	53283674	C C	CACTTACT others(45): Show CACTTACTTACTACATACCCGGGCCACTTACTTACTACATACCCGGGCCA CTT	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG01255.hp2 HG00738.hp2 HG01255.hp2	a0003 a0003	a0003c0005 a0003c0005	a0003c0005t0002 a0003c0005t0002	a0003c0005t0002g0095 a0003c0005t0002g0096 a0003c0005t0002g0095 a0003c0005t0002g0096	2	296	0.0068	52	c.368 others(69): Show c.368-2960_368-2959insAAGTGGCCCGGGTATGTAGTAAGTAAGT GGCCCGGGTATGTAGTAAGTAAGT	LRP8	ENSG00000157193.18	transcript	ENST00000306052.12	protein_coding	3/18			chr1	TogoVar
LRRC18_chr10_48904480_48944840	48923506	A A	ATATATAT others(45): Show ATATATATATATATATATATATATATATATATATATATATATATATATGT ATG	intron_variant intron_variant	MODIFIER	NA19054.hp2 NA19054.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0185 a0002c0002t0001g0185	1	420	0.0024	52	c.-77 others(69): Show c.-77-9275_-77-9274insCATACATATATATATATATATATATATA TATATATATATATATATATATATA	LRRC18	ENSG00000165383.12	transcript	ENST00000374160.8	protein_coding	2/3			chr10	TogoVar
LRRC18_chr10_48904480_48944840	48923506	A A	ATATATAT others(45): Show ATATATATATATATATATATATATATATATATATATATATATATGTATGT ATG	intron_variant intron_variant	MODIFIER	HG00673.hp1 HG01952.hp1 HG01952.hp2 others(1): Show HG00673.hp1 HG01952.hp1 HG01952.hp2 HG03834.hp2	a0002 a0002	a0002c0002 a0002c0006 a0002c0002 a0002c0006	a0002c0002t0001 a0002c0006t0001 a0002c0002t0001 a0002c0006t0001	a0002c0002t0001g0056 a0002c0002t0001g0120 a0002c0002t0001g0158 others(1): Show a0002c0002t0001g0056 a0002c0002t0001g0120 a0002c0002t0001g0158 a0002c0006t0001g0166	4	420	0.0095	52	c.-77 others(69): Show c.-77-9275_-77-9274insCATACATACATATATATATATATATATA TATATATATATATATATATATATA	LRRC18	ENSG00000165383.12	transcript	ENST00000374160.8	protein_coding	2/3			chr10	TogoVar
LRRC18_chr10_48904480_48944840	48923506	A A	ATATATAT others(45): Show ATATATATATATATATATATATATATATATATATATATATGTATGTATGT ATG	intron_variant intron_variant	MODIFIER	HG02040.hp2 HG02040.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0145 a0002c0002t0001g0145	1	420	0.0024	52	c.-77 others(69): Show c.-77-9275_-77-9274insCATACATACATACATATATATATATATA TATATATATATATATATATATATA	LRRC18	ENSG00000165383.12	transcript	ENST00000374160.8	protein_coding	2/3			chr10	TogoVar
LRRC20_chr10_70293975_70387625	70367962	G G	GTTATGTT others(45): Show GTTATGTTATGTTATGTTATGTTATGTTATGTTATGTTATGTTATGTTAT GTT	intron_variant intron_variant	MODIFIER	HG02965.hp1 HG02965.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0049 a0001c0001t0049	a0001c0001t0049g0369 a0001c0001t0049g0369	1	378	0.0027	52	c.82+ others(67): Show c.82+8489_82+8490insAACATAACATAACATAACATAACATAACAT AACATAACATAACATAACATAA	LRRC20	ENSG00000172731.15	transcript	ENST00000446961.4	protein_coding	2/4			chr10	TogoVar
LRRC24_chr8_144517388_144532033	144531183	C C	CAGGGCAG others(45): Show CAGGGCAGGGAGCAGCAGGTGGGGTGTGGACTGGACACAGCAGGCACGGC AGA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01975.hp1 HG02922.hp2 HG03139.hp2 others(2): Show HG01975.hp1 HG02922.hp2 HG03139.hp2 NA19030.hp2 NA20300.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0004 a0001c0003t0001g0004	5	398	0.0126	52	c.-42 others(63): Show c.-4284_-4283insTCTGCCGTGCCTGCTGTGTCCAGTCCACACCCCA CCTGCTGCTCCCTGCCCT	LRRC24	ENSG00000254402.7	transcript	ENST00000529415.7	protein_coding		4151		chr8	TogoVar
LRRC24_chr8_144517388_144532033	144531191	A A	AGAGCAGC others(45): Show AGAGCAGCAGGTGGGATGTGGACTGGACACAGCAGGCACAGCAGAAGGGC AGC	upstream_gene_variant upstream_gene_variant	MODIFIER	NA21309.hp1 NA21309.hp1	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0001 a0001c0005t0001	a0001c0005t0001g0007 a0001c0005t0001g0007	1	398	0.0025	52	c.-42 others(63): Show c.-4292_-4291insGCTGCCCTTCTGCTGTGCCTGCTGTGTCCAGTCC ACATCCCACCTGCTGCTC	LRRC24	ENSG00000254402.7	transcript	ENST00000529415.7	protein_coding		4159		chr8	TogoVar
LRRC24_chr8_144517388_144532033	144531191	A A	AGAGCAGC others(45): Show AGAGCAGCAGGTGGGGAGTGGGCTAGACATAGCAGGCACGGCAGAAGGGC AGC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03017.hp2 HG03491.hp2 HG03688.hp1 others(3): Show HG03017.hp2 HG03491.hp2 HG03688.hp1 HG04184.hp1 NA18975.hp1 NA19091.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0001 a0001c0001t0001 a0002c0002t0001	a0001c0001t0001g0002 a0002c0002t0001g0001 a0001c0001t0001g0002 a0002c0002t0001g0001	6	398	0.0151	52	c.-42 others(63): Show c.-4292_-4291insGCTGCCCTTCTGCCGTGCCTGCTATGTCTAGCCC ACTCCCCACCTGCTGCTC	LRRC24	ENSG00000254402.7	transcript	ENST00000529415.7	protein_coding		4159		chr8	TogoVar
LRRC24_chr8_144517388_144532033	144531242	C C	CAGGGCAG others(45): Show CAGGGCAGCGAGCAGCAGGTGGGGAGTGGGCTAGACATAGCAGGCACGGC AGA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01069.hp2 HG01071.hp1 HG01123.hp2 others(3): Show HG01069.hp2 HG01071.hp1 HG01123.hp2 HG01261.hp2 HG01358.hp2 HG02293.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0003 a0002c0002t0001 a0002c0002t0003	a0002c0002t0001g0001 a0002c0002t0003g0001 a0002c0002t0001g0001 a0002c0002t0003g0001	6	398	0.0151	52	c.-43 others(63): Show c.-4394_-4343dupTCTGCCGTGCCTGCTATGTCTAGCCCACTCCCCA CCTGCTGCTCGCTGCCCT	LRRC24	ENSG00000254402.7	transcript	ENST00000529415.7	protein_coding		4210		chr8	TogoVar
LRRC24_chr8_144517388_144532033	144531242	C C	CAGGGCAG others(45): Show CAGGGCAGGGAGCAGCAGGTGGGGTGTGGACTGGACACAGCAGGCACGGC AGA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02300.hp2 HG02300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0003	1	398	0.0025	52	c.-43 others(63): Show c.-4343_-4342insTCTGCCGTGCCTGCTGTGTCCAGTCCACACCCCA CCTGCTGCTCCCTGCCCT	LRRC24	ENSG00000254402.7	transcript	ENST00000529415.7	protein_coding		4210		chr8	TogoVar
LRRC24_chr8_144517388_144532033	144531244	G G	GGGCAGGG others(45): Show GGGCAGGGAGCAGCAGGTGGGGTGTGGACTGGACACAGCAGGCACGGCAG AAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01346.hp1 HG01346.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0002	1	398	0.0025	52	c.-43 others(63): Show c.-4345_-4344insTTTCTGCCGTGCCTGCTGTGTCCAGTCCACACCC CACCTGCTGCTCCCTGCC	LRRC24	ENSG00000254402.7	transcript	ENST00000529415.7	protein_coding		4212		chr8	TogoVar
LRRC24_chr8_144517388_144532033	144531301	C C	CAGGGCAG others(45): Show CAGGGCAGCGAGCAGCAGGTGGGGTGTGGACTGGACACAGCAAGCACAGC AGA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03139.hp2 NA20300.hp1 HG03139.hp2 NA20300.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0004 a0001c0003t0001g0004	2	398	0.0050	52	c.-44 others(63): Show c.-4402_-4401insTCTGCTGTGCTTGCTGTGTCCAGTCCACACCCCA CCTGCTGCTCGCTGCCCT	LRRC24	ENSG00000254402.7	transcript	ENST00000529415.7	protein_coding		4269		chr8	TogoVar
LRRC27_chr10_132327193_132386508	132358572	G G	GAGGAGCC others(45): Show GAGGAGCCAAGGTGGTGGAGTGTGGGGAGGAGCCGAGGTGGTGGAGCGTG GGA	intron_variant intron_variant	MODIFIER	HG01515.hp2 HG02896.hp1 HG02897.hp2 others(1): Show HG01515.hp2 HG02896.hp1 HG02897.hp2 HG03239.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0150 a0001c0001t0001g0156 a0001c0001t0002g0005 others(1): Show a0001c0001t0001g0150 a0001c0001t0001g0156 a0001c0001t0002g0005 a0001c0001t0002g0006	4	290	0.0138	52	c.117 others(71): Show c.1170+2693_1170+2694insAAGGTGGTGGAGTGTGGGGAGGAGCC GAGGTGGTGGAGCGTGGGAAGGAGCC	LRRC27	ENSG00000148814.18	transcript	ENST00000368614.8	protein_coding	8/10		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRRC27_chr10_132327193_132386508	132358592	C C	CAGTGTGG others(45): Show CAGTGTGGGGAGGAGCCGAGGTGGTGGAGTGTGGGGAGGAGCCGAGGTGG TGG	intron_variant intron_variant	MODIFIER	HG03516.hp2 NA19043.hp2 HG03516.hp2 NA19043.hp2	a0001 a0001	a0001c0009 a0001c0009	a0001c0009t0002 a0001c0009t0052 a0001c0009t0002 a0001c0009t0052	a0001c0009t0002g0283 a0001c0009t0052g0282 a0001c0009t0002g0283 a0001c0009t0052g0282	2	290	0.0069	52	c.117 others(71): Show c.1170+2708_1170+2709insTGTGGGGAGGAGCCGAGGTGGTGGAG TGTGGGGAGGAGCCGAGGTGGTGGAG	LRRC27	ENSG00000148814.18	transcript	ENST00000368614.8	protein_coding	8/10		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRRC27_chr10_132327193_132386508	132358734	C C	CAGTGTGG others(45): Show CAGTGTGGGGAGGAGCCGAGGTGGTGGAGTGTGGGGAGGAGCCGAGGTGG TGG	intron_variant intron_variant	MODIFIER	HG01167.hp2 HG01167.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0202 a0001c0001t0001g0202	1	290	0.0035	52	c.117 others(71): Show c.1171-2721_1171-2720insTGTGGGGAGGAGCCGAGGTGGTGGAG TGTGGGGAGGAGCCGAGGTGGTGGAG	LRRC27	ENSG00000148814.18	transcript	ENST00000368614.8	protein_coding	8/10		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRRC27_chr10_132327193_132386508	132359044	T T	TGTGGGGA others(45): Show TGTGGGGAGGAGCCGAGGTGGTGGAGTGTGGGGAGGAGCCGAGGTGGTGG AGC	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00140.hp1	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0010 a0002c0004t0010	a0002c0004t0010g0011 a0002c0004t0010g0011	1	290	0.0035	52	c.117 others(71): Show c.1171-2388_1171-2387insTGTGGGGAGGAGCCGAGGTGGTGGAG CGTGGGGAGGAGCCGAGGTGGTGGAG	LRRC27	ENSG00000148814.18	transcript	ENST00000368614.8	protein_coding	8/10		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRRC27_chr10_132327193_132386508	132359108	G G	GAGGAGCC others(45): Show GAGGAGCCGAGGTGGTGGAGTGTGGGGAGGAGCCGAGGTGGTGGAGCGTG GGA	intron_variant intron_variant	MODIFIER	HG03516.hp2 HG03516.hp2	a0001 a0001	a0001c0009 a0001c0009	a0001c0009t0002 a0001c0009t0002	a0001c0009t0002g0283 a0001c0009t0002g0283	1	290	0.0035	52	c.117 others(71): Show c.1171-2330_1171-2329insTGTGGGGAGGAGCCGAGGTGGTGGAG CGTGGGAAGGAGCCGAGGTGGTGGAG	LRRC27	ENSG00000148814.18	transcript	ENST00000368614.8	protein_coding	8/10		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRRC27_chr10_132327193_132386508	132364420	T T	TACACCCA others(45): Show TACACCCACGCTTACATCTACCTCCACGCCCACACTTACACCCACCCACA CTC	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01109.hp1	a0004 a0004	a0004c0015 a0004c0015	a0004c0015t0015 a0004c0015t0015	a0004c0015t0015g0050 a0004c0015t0015g0050	1	290	0.0035	52	c.129 others(69): Show c.1290-978_1290-977insGCCCACACTTACACCCACCCACACTCAC ACCCACGCTTACATCTACCTCCAC	LRRC27	ENSG00000148814.18	transcript	ENST00000368614.8	protein_coding	9/10		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRRC27_chr10_132327193_132386508	132364513	A A	ACACCCAC others(45): Show ACACCCACACTCACACCCACCCTTACATCTACCTCCACACCCACACTCAC ACC	intron_variant intron_variant	MODIFIER	HG00544.hp1 HG00544.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0257 a0001c0002t0003g0257	1	290	0.0035	52	c.129 others(69): Show c.1290-908_1290-907insCCACACTCACACCCACCCTTACATCTAC CTCCACACCCACACTCACACCCAC	LRRC27	ENSG00000148814.18	transcript	ENST00000368614.8	protein_coding	9/10		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRRC3B_chr3_26617772_26715776	26671373	T T	TATATATA others(45): Show TATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA GAG	intron_variant intron_variant	MODIFIER	NA18522.hp2 NA18522.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0356 a0001c0002t0003g0356	1	370	0.0027	52	c.-16 others(73): Show c.-160-38139_-160-38138insTATATATATATATAGAGAGAGAGA GAGAGAGAGAGAGAGAGAGAGAGAGAGA	LRRC3B	ENSG00000179796.13	transcript	ENST00000396641.7	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr3	TogoVar
LRRC3B_chr3_26617772_26715776	26671373	T T	TATATATA others(45): Show TATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA GAG	intron_variant intron_variant	MODIFIER	NA20129.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0018 a0001c0001t0001g0018	1	370	0.0027	52	c.-16 others(73): Show c.-160-38139_-160-38138insTATATATATATATATATAGAGAGA GAGAGAGAGAGAGAGAGAGAGAGAGAGA	LRRC3B	ENSG00000179796.13	transcript	ENST00000396641.7	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr3	TogoVar
LRRC47_chr1_3773559_3801498	3797681	T T	TTAATTTT others(45): Show TTAATTTTTATATTAACCGTGTTAATATAATTTTTATATTAACCGTGTTA ATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00140.hp1 HG01074.hp1 HG01123.hp2 others(16): Show HG00140.hp1 HG01074.hp1 HG01123.hp2 HG01243.hp1 HG01361.hp1 HG01515.hp2 HG01517.hp1 HG02074.hp1 HG02145.hp1 HG02258.hp1 HG02647.hp1 HG02717.hp1 HG02717.hp2 HG02818.hp2 HG02896.hp2 HG02976.hp2 HG03225.hp2 NA19088.hp2 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0004 a0001c0007 a0001c0001 a0001c0004 a0001c0007	a0001c0001t0003 a0001c0001t0014 a0001c0001t0028 others(3): Show a0001c0001t0003 a0001c0001t0014 a0001c0001t0028 a0001c0004t0007 a0001c0004t0017 a0001c0007t0003	a0001c0001t0003g0149 a0001c0001t0014g0182 a0001c0001t0028g0142 others(7): Show a0001c0001t0003g0149 a0001c0001t0014g0182 a0001c0001t0028g0142 a0001c0004t0007g0009 a0001c0004t0007g0051 a0001c0004t0007g0053 a0001c0004t0007g0054 a0001c0004t0007g0172 a0001c0004t0017g0052 a0001c0007t0003g0045	19	412	0.0461	52	c.-12 others(63): Show c.-1206_-1205insTATTAACACGGTTAATATAAAAATTATATTAACA CGGTTAATATAAAAATTA	LRRC47	ENSG00000130764.10	transcript	ENST00000378251.3	protein_coding		1184		chr1	TogoVar
LRRC4C_chr11_40109209_41464652	40696288	A A	ATATATAT others(45): Show ATATATATATATATATATATATATATATATACACACATATATATATATAT GAG	intron_variant intron_variant	MODIFIER	HG02970.hp2 HG02970.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0009 a0001c0001t0002g0009	1	48	0.0208	52	c.-40 others(73): Show c.-406-48011_-406-48010insCTCATATATATATATATGTGTGTA TATATATATATATATATATATATATATA	LRRC4C	ENSG00000148948.8	transcript	ENST00000528697.6	protein_coding	2/6			chr11	TogoVar
LRRC74A_chr14_76821408_76875304	76821921	T T	TGGGGGGG others(45): Show TGGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGG TGG	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19000.hp2 NA19000.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0320 a0001c0001t0002g0320	1	408	0.0025	52	c.-47 others(63): Show c.-4777_-4776insGGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCC CGTCCGGGAGGGAGGTGG	LRRC74A	ENSG00000100565.16	transcript	ENST00000689127.1	protein_coding		4486		chr14	TogoVar
LRRK1_chr15_100914357_101083257	100962821	A A	ACACATAT others(45): Show ACACATATATATATATATACATATATATATATATATACATATATATATAT TTT	intron_variant intron_variant	MODIFIER	HG03041.hp2 HG03041.hp2	a0001 a0001	a0001c0014 a0001c0014	a0001c0014t0006 a0001c0014t0006	a0001c0014t0006g0111 a0001c0014t0006g0111	1	338	0.0030	52	c.98- others(69): Show c.98-10983_98-10982insCACATATATATATATATACATATATATA TATATATACATATATATATATTTT	LRRK1	ENSG00000154237.13	transcript	ENST00000388948.8	protein_coding	2/33			chr15	TogoVar
LRRTM4_chr2_76742685_77527376	77014503	C C	CATATATA others(45): Show CATATATATATATATATATATATATATATATATATATATATATATATATA TAT	intron_variant intron_variant	MODIFIER	HG01516.hp1 HG01516.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0057 a0001c0001t0001g0057	1	128	0.0078	52	c.155 others(75): Show c.1552-265588_1552-265587insATATATATATATATATATATAT ATATATATATATATATATATATATATATAT	LRRTM4	ENSG00000176204.14	transcript	ENST00000409884.6	protein_coding	3/3			chr2	TogoVar
LSAMP_chr3_115797374_116450487	116273683	C C	CAGATATA others(45): Show CAGATATATATATATATATATATATATATATATATATATATATATATATA TAT	intron_variant intron_variant	MODIFIER	HG03195.hp2 HG03195.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0071 a0001c0001t0007g0071	1	104	0.0096	52	c.155 others(73): Show c.155+171193_155+171194insATATATATATATATATATATATAT ATATATATATATATATATATATATATCT	LSAMP	ENSG00000185565.13	transcript	ENST00000490035.7	protein_coding	1/6			chr3	TogoVar
LSP1_chr11_1848084_1897263	1873974	A A	AGGGAGGC others(45): Show AGGGAGGCCGGCGGAGGAGGGAGGCTGGCAGAGCAGGGAGCCCGGCAGAG GAG	intron_variant intron_variant	MODIFIER	HG02523.hp2 HG02523.hp2	a0002 a0002	a0002c0005 a0002c0005	a0002c0005t0001 a0002c0005t0001	a0002c0005t0001g0119 a0002c0005t0001g0119	1	360	0.0028	52	c.54- others(67): Show c.54-6074_54-6073insCCCGGCAGAGGAGGGGAGGCCGGCGGAGGA GGGAGGCTGGCAGAGCAGGGAG	LSP1	ENSG00000130592.17	transcript	ENST00000311604.8	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr11	TogoVar
LTBP2_chr14_74493183_74617237	74543538	T T	TTTCCTTC others(45): Show TTTCCTTCCTTCCTTCCCTCCCTTTTTCCTTCCTTCCTTCCTTCCTTCCT CCC	intron_variant intron_variant	MODIFIER	HG06807.hp1 HG06807.hp1	a0001 a0001	a0001c0037 a0001c0037	a0001c0037t0003 a0001c0037t0003	a0001c0037t0003g0052 a0001c0037t0003g0052	1	282	0.0036	52	c.178 others(71): Show c.1789+6324_1789+6325insGGGAGGAAGGAAGGAAGGAAGGAAGG AAAAAGGGAGGGAAGGAAGGAAGGAA	LTBP2	ENSG00000119681.12	transcript	ENST00000261978.9	protein_coding	8/35			chr14	TogoVar
LTBP2_chr14_74493183_74617237	74564023	C C	CTATATAT others(45): Show CTATATATATATTTATATATATATATTTATATATATATTTATATATATAT ATT	intron_variant intron_variant	MODIFIER	HG02615.hp1 HG02615.hp1	a0005 a0005	a0005c0021 a0005c0021	a0005c0021t0001 a0005c0021t0001	a0005c0021t0001g0275 a0005c0021t0001g0275	1	282	0.0036	52	c.831 others(69): Show c.831-8382_831-8331dupAATATATATATATAAATATATATATAAA TATATATATATAAATATATATATA	LTBP2	ENSG00000119681.12	transcript	ENST00000261978.9	protein_coding	3/35			chr14	TogoVar
LTBP2_chr14_74493183_74617237	74564087	T T	TTATATAT others(45): Show TTATATATATATATTTATATATATATTTATATATATATTTATATATATAT TTA	intron_variant intron_variant	MODIFIER	HG00609.hp2 HG00609.hp2	a0003 a0003	a0003c0020 a0003c0020	a0003c0020t0012 a0003c0020t0012	a0003c0020t0012g0162 a0003c0020t0012g0162	1	282	0.0036	52	c.831 others(69): Show c.831-8395_831-8394insTAAATATATATATAAATATATATATAAA TATATATATAAATATATATATATA	LTBP2	ENSG00000119681.12	transcript	ENST00000261978.9	protein_coding	3/35			chr14	TogoVar
LTBP2_chr14_74493183_74617237	74564139	A A	ATATATAT others(45): Show ATATATATATATTTATATATATATATTTATATATATATTTATATATATAT ATT	intron_variant intron_variant	MODIFIER	HG02738.hp1 HG02738.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0167 a0001c0002t0001g0167	1	282	0.0036	52	c.831 others(69): Show c.831-8447_831-8446insAATATATATATATAAATATATATATAAA TATATATATATAAATATATATATA	LTBP2	ENSG00000119681.12	transcript	ENST00000261978.9	protein_coding	3/35			chr14	TogoVar
LTBP2_chr14_74493183_74617237	74564359	A A	ATATATAT others(45): Show ATATATATTTATATATATTTATATATATATTTATATATATTTATATATAT ATT	intron_variant intron_variant	MODIFIER	HG02809.hp2 HG02809.hp2	a0001 a0001	a0001c0054 a0001c0054	a0001c0054t0001 a0001c0054t0001	a0001c0054t0001g0119 a0001c0054t0001g0119	1	282	0.0036	52	c.831 others(69): Show c.831-8667_831-8666insAATATATATATAAATATATATAAATATA TATATAAATATATATAAATATATA	LTBP2	ENSG00000119681.12	transcript	ENST00000261978.9	protein_coding	3/35			chr14	TogoVar
LUC7L_chr16_183990_234449	186489	C C	CGGGGGGG others(45): Show CGGGGGGGACAGCGACATGGAGGGAACAGCGACACGGGGGGAACAGCGAC ACG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01515.hp2 HG01515.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0018 a0001c0001t0001g0018	1	350	0.0029	52	c.27 others(63): Show c.2708_*2709insCGTGTCGCTGTTCCCCCCGTGTCGCTGTTCCCTC CATGTCGCTGTCCCCCCC	LUC7L	ENSG00000007392.17	transcript	ENST00000293872.13	protein_coding		2500		chr16	TogoVar
LURAP1L_chr9_12770020_12828060	12807094	A A	AATATATA others(45): Show AATATATATATATATATATATATATATATATATATATATATATATATATA TAT	intron_variant intron_variant	MODIFIER	HG00558.hp2 HG01361.hp1 HG01978.hp2 others(5): Show HG00558.hp2 HG01361.hp1 HG01978.hp2 HG02683.hp2 NA18941.hp2 NA18953.hp2 NA19003.hp2 NA19091.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0012 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0012 a0002c0002t0002	a0001c0001t0001g0178 a0001c0001t0001g0217 a0001c0001t0002g0151 others(5): Show a0001c0001t0001g0178 a0001c0001t0001g0217 a0001c0001t0002g0151 a0001c0001t0002g0163 a0001c0001t0002g0382 a0001c0001t0012g0267 a0002c0002t0002g0358 a0002c0002t0002g0359	8	418	0.0191	52	c.313 others(71): Show c.313-14268_313-14267insATATATATATATATATATATATATAT ATATATATATATATATATATATATAT	LURAP1L	ENSG00000153714.6	transcript	ENST00000319264.4	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr9	TogoVar
LYAR_chr4_4262701_4295154	4263865	A A	AGGCTGGA others(45): Show AGGCTGGAGTGCAGTGGTGCGATCTTGGCTCAGCACAACCTCTGGTTGCC CCG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG04184.hp2 HG04184.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0097 a0001c0001t0006g0097	1	436	0.0023	52	c.40 others(63): Show c.4023_*4024insCGGGGCAACCAGAGGTTGTGCTGAGCCAAGATCG CACCACTGCACTCCAGCC	LYAR	ENSG00000145220.14	transcript	ENST00000343470.9	protein_coding		3835		chr4	TogoVar
LYAR_chr4_4262701_4295154	4263865	A A	AGGCTGGA others(45): Show AGGCTGGAGTGCAGTGGTGCGATCTTGGCTCAGCACGAACCTCTGGTTGC CCG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01517.hp1 HG01517.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0013 a0001c0001t0001g0013	1	436	0.0023	52	c.40 others(63): Show c.4023_*4024insCGGGCAACCAGAGGTTCGTGCTGAGCCAAGATCG CACCACTGCACTCCAGCC	LYAR	ENSG00000145220.14	transcript	ENST00000343470.9	protein_coding		3835		chr4	TogoVar
LYAR_chr4_4262701_4295154	4263869	T T	TGGAGTGC others(45): Show TGGAGTGCAGTGGTGCGATCTTGGCTCAGCACAACCTCTGGTTGCCCGGG CTG	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18939.hp1 NA18939.hp1	a0008 a0008	a0008c0010 a0008c0010	a0008c0010t0009 a0008c0010t0009	a0008c0010t0009g0078 a0008c0010t0009g0078	1	436	0.0023	52	c.40 others(63): Show c.4019_*4020insCAGCCCGGGCAACCAGAGGTTGTGCTGAGCCAAG ATCGCACCACTGCACTCC	LYAR	ENSG00000145220.14	transcript	ENST00000343470.9	protein_coding		3831		chr4	TogoVar
LYNX1_chr8_142766202_142782202	142777431	C C	CCCCGCCT others(45): Show CCCCGCCTCCTGGGCACCCGCCGAGCCGAGTTCACCGCAGGCCCCGCCCC GGA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19009.hp1 NA19009.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0006 a0001c0001t0002g0006	1	444	0.0023	52	c.-54 others(61): Show c.-542_-491dupTCCGGGGCGGGGCCTGCGGTGAACTCGGCTCGGCGG GTGCCCAGGAGGCGGG	LYNX1	ENSG00000180155.20	transcript	ENST00000652477.1	protein_coding		230		chr8	TogoVar
LYPD5_chr19_43790927_43807447	43794410	C C	CATATATA others(45): Show CATATATATATACATACATATATATATATATATATATATATATATATATA TAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02451.hp1 HG03540.hp2 HG02451.hp1 HG03540.hp2	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0007 a0002c0001t0007	a0002c0001t0007g0030 a0002c0001t0007g0095 a0002c0001t0007g0030 a0002c0001t0007g0095	2	428	0.0047	52	c.31 others(63): Show c.3180_*3181insATATATATATATATATATATATATATATATATAT ATGTATGTATATATATAT	LYPD5	ENSG00000159871.15	transcript	ENST00000377950.8	protein_coding		1516		chr19	TogoVar

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