Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	chr	external
C8orf82_chr8_144520733_144534111	144528922	T T	G G	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02145.hp2 HG02572.hp1 HG02970.hp2 HG02145.hp2 HG02572.hp1 HG02970.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0018 a0001c0001t0008g0018	3	398	0.0075	0	c.-6A others(2): Show c.-6A>C	C8orf82	ENSG00000213563.7	transcript	ENST00000524821.6	protein_coding	1/3	6	chr8	TogoVar
C8orf82_chr8_144520733_144534111	144529018	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02886.hp2 HG02922.hp2 HG02965.hp1 others(1): Show HG02886.hp2 HG02922.hp2 HG02965.hp1 HG03579.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0017 a0001c0003t0007 a0001c0001t0017 a0001c0003t0007	a0001c0001t0017g0045 a0001c0003t0007g0017 a0001c0001t0017g0045 a0001c0003t0007g0017	4	398	0.0101	0	c.-10 others(4): Show c.-102G>A	C8orf82	ENSG00000213563.7	transcript	ENST00000524821.6	protein_coding	1/3	102	chr8	TogoVar
C8orf82_chr8_144520733_144534111	144529027	G G	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02630.hp1 HG02630.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0016 a0001c0001t0016	a0001c0001t0016g0044 a0001c0001t0016g0044	1	398	0.0025	0	c.-11 others(4): Show c.-111C>T	C8orf82	ENSG00000213563.7	transcript	ENST00000524821.6	protein_coding	1/3	111	chr8	TogoVar
C8orf82_chr8_144520733_144534111	144529079	G G	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02258.hp1 HG03041.hp1 HG03209.hp1 others(1): Show HG02258.hp1 HG03041.hp1 HG03209.hp1 HG03453.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0009 a0001c0003t0022 a0001c0003t0009 a0001c0003t0022	a0001c0003t0009g0025 a0001c0003t0009g0061 a0001c0003t0022g0062 a0001c0003t0009g0025 a0001c0003t0009g0061 a0001c0003t0022g0062	4	398	0.0101	0	c.-16 others(4): Show c.-163C>T	C8orf82	ENSG00000213563.7	transcript	ENST00000524821.6	protein_coding	1/3	163	chr8	TogoVar
C8orf82_chr8_144520733_144534111	144529099	G G	C C	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG03579.hp2 HG03579.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0017 a0001c0001t0017	a0001c0001t0017g0045 a0001c0001t0017g0045	1	398	0.0025	0	c.-18 others(4): Show c.-183C>G	C8orf82	ENSG00000213563.7	transcript	ENST00000524821.6	protein_coding	1/3	183	chr8	TogoVar
C8orf82_chr8_144520733_144534111	144529108	T T	C C	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG01109.hp2 HG01884.hp1 HG01884.hp2 others(61): Show HG01109.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01975.hp1 HG02055.hp1 HG02109.hp2 HG02145.hp2 HG02257.hp1 HG02258.hp1 HG02280.hp1 HG02280.hp2 HG02451.hp2 HG02559.hp1 HG02572.hp1 HG02572.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp2 HG02647.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02809.hp1 HG02809.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03041.hp1 HG03130.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp2 HG03579.hp1 HG04204.hp1 HG06807.hp2 NA18522.hp1 NA18906.hp1 NA18906.hp2 NA19030.hp1 NA19030.hp2 NA20300.hp1 NA21309.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0003 a0002c0004 others(1): Show a0001c0001 a0001c0003 a0002c0004 a0003c0005	a0001c0001t0003 a0001c0001t0008 a0001c0003t0003 others(11): Show a0001c0001t0003 a0001c0001t0008 a0001c0003t0003 a0001c0003t0004 a0001c0003t0007 a0001c0003t0009 a0001c0003t0010 a0001c0003t0018 a0001c0003t0022 a0002c0004t0003 a0002c0004t0005 a0002c0004t0020 a0002c0004t0021 a0003c0005t0019	a0001c0001t0003g0024 a0001c0001t0008g0018 a0001c0003t0003g0013 others(24): Show a0001c0001t0003g0024 a0001c0001t0008g0018 a0001c0003t0003g0013 a0001c0003t0003g0022 a0001c0003t0003g0047 a0001c0003t0003g0049 a0001c0003t0003g0050 a0001c0003t0003g0055 a0001c0003t0004g0014 a0001c0003t0004g0046 a0001c0003t0004g0048 a0001c0003t0004g0051 a0001c0003t0004g0052 a0001c0003t0004g0056 a0001c0003t0007g0017 a0001c0003t0009g0025 a0001c0003t0009g0061 a0001c0003t0010g0023 a0001c0003t0018g0053 a0001c0003t0022g0062 a0002c0004t0003g0010 a0002c0004t0003g0057 a0002c0004t0003g0060 a0002c0004t0005g0012 a0002c0004t0020g0059 a0002c0004t0021g0058 a0003c0005t0019g0054	64	398	0.1608	0	c.-19 others(4): Show c.-192A>G	C8orf82	ENSG00000213563.7	transcript	ENST00000524821.6	protein_coding	1/3	192	chr8	TogoVar
C8orf88_chr8_90953471_90990238	90980444	A A	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00673.hp2 NA18966.hp1 NA18969.hp2 others(1): Show HG00673.hp2 NA18966.hp1 NA18969.hp2 NA18972.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0020 a0001c0001t0003g0089 a0001c0001t0003g0020 a0001c0001t0003g0089	4	368	0.0109	0	c.-9T others(2): Show c.-9T>A	C8orf88	ENSG00000253250.3	transcript	ENST00000517562.3	protein_coding	2/6	9	chr8	TogoVar
C8orf89_chr8_73236331_73264530	73259484	G G	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00438.hp1 HG00544.hp1 HG00597.hp1 others(31): Show HG00438.hp1 HG00544.hp1 HG00597.hp1 HG00741.hp2 HG01361.hp2 HG01928.hp1 HG01952.hp2 HG02027.hp2 HG02040.hp2 HG02056.hp2 HG02071.hp2 HG02129.hp1 HG02132.hp1 HG02165.hp1 HG02738.hp1 HG04184.hp1 NA18942.hp1 NA18943.hp1 NA18945.hp1 NA18959.hp2 NA18962.hp1 NA18969.hp1 NA18973.hp2 NA18990.hp1 NA18999.hp2 NA19011.hp1 NA19057.hp2 NA19065.hp2 NA19067.hp2 NA19068.hp2 NA19079.hp1 NA19083.hp1 NA20905.hp2 homoSapiens_chm13v2.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0003 a0002c0002t0005 a0002c0002t0003 a0002c0002t0005	a0002c0002t0003g0003 a0002c0002t0003g0008 a0002c0002t0003g0020 others(12): Show a0002c0002t0003g0003 a0002c0002t0003g0008 a0002c0002t0003g0020 a0002c0002t0003g0021 a0002c0002t0003g0033 a0002c0002t0003g0034 a0002c0002t0003g0054 a0002c0002t0003g0055 a0002c0002t0003g0056 a0002c0002t0003g0058 a0002c0002t0003g0059 a0002c0002t0003g0060 a0002c0002t0003g0062 a0002c0002t0005g0057 a0002c0002t0005g0061	34	344	0.0988	0	c.-26 others(3): Show c.-26C>A	C8orf89	ENSG00000274443.5	transcript	ENST00000624510.4	protein_coding	1/4	26	chr8	TogoVar
C8orf89_chr8_73236331_73264530	73259498	G G	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA19057.hp1 NA19057.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0169 a0001c0001t0006g0169	1	344	0.0029	0	c.-40 others(3): Show c.-40C>T	C8orf89	ENSG00000274443.5	transcript	ENST00000624510.4	protein_coding	1/4	40	chr8	TogoVar
C9_chr5_39279140_39369495	39364479	G G	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00438.hp1 HG02056.hp1 NA18952.hp1 others(7): Show HG00438.hp1 HG02056.hp1 NA18952.hp1 NA18960.hp2 NA18964.hp2 NA18979.hp1 NA18994.hp2 NA19080.hp2 NA19081.hp1 NA19081.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0010 a0001c0001t0004 a0001c0001t0010	a0001c0001t0004g0018 a0001c0001t0004g0362 a0001c0001t0004g0363 others(6): Show a0001c0001t0004g0018 a0001c0001t0004g0362 a0001c0001t0004g0363 a0001c0001t0004g0365 a0001c0001t0004g0366 a0001c0001t0004g0367 a0001c0001t0004g0368 a0001c0001t0004g0369 a0001c0001t0010g0364	10	394	0.0254	0	c.-15 others(3): Show c.-15C>T	C9	ENSG00000113600.12	transcript	ENST00000263408.5	protein_coding	1/11	15	chr5	TogoVar
C9orf131_chr9_35037240_35050986	35042241	G G	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA19043.hp1 NA19043.hp1	a0017 a0017	a0017c0027 a0017c0027	a0017c0027t0004 a0017c0027t0004	a0017c0027t0004g0002 a0017c0027t0004g0002	1	428	0.0023	0	c.-14 others(3): Show c.-14G>A	C9orf131	ENSG00000174038.13	transcript	ENST00000312292.6	protein_coding	1/2	14	chr9	TogoVar
C9orf152_chr9_110194561_110213159	110207642	G G	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA18953.hp1 NA18960.hp2 NA18977.hp1 others(1): Show NA18953.hp1 NA18960.hp2 NA18977.hp1 NA19004.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0015 a0001c0001t0015	a0001c0001t0015g0051 a0001c0001t0015g0151 a0001c0001t0015g0152 a0001c0001t0015g0051 a0001c0001t0015g0151 a0001c0001t0015g0152	4	466	0.0086	0	c.-63 others(3): Show c.-63C>T	C9orf152	ENSG00000188959.10	transcript	ENST00000400613.5	protein_coding	1/2	63	chr9	TogoVar
C9orf152_chr9_110194561_110213159	110207757	G G	C C	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02622.hp2 HG02622.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0049 a0001c0003t0049	a0001c0003t0049g0160 a0001c0003t0049g0160	1	466	0.0022	0	c.-17 others(4): Show c.-178C>G	C9orf152	ENSG00000188959.10	transcript	ENST00000400613.5	protein_coding	1/2	178	chr9	TogoVar
C9orf152_chr9_110194561_110213159	110207779	G G	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG01934.hp1 HG01978.hp1 HG01993.hp1 HG01934.hp1 HG01978.hp1 HG01993.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0017 a0001c0001t0017	a0001c0001t0017g0022 a0001c0001t0017g0022	3	466	0.0064	0	c.-20 others(4): Show c.-200C>A	C9orf152	ENSG00000188959.10	transcript	ENST00000400613.5	protein_coding	1/2	200	chr9	TogoVar
C9orf152_chr9_110194561_110213159	110207850	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02055.hp2 HG02055.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0027 a0001c0001t0027	a0001c0001t0027g0061 a0001c0001t0027g0061	1	466	0.0022	0	c.-27 others(4): Show c.-271G>A	C9orf152	ENSG00000188959.10	transcript	ENST00000400613.5	protein_coding	1/2	271	chr9	TogoVar
C9orf152_chr9_110194561_110213159	110207916	AAGAG AAGAG	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00609.hp2 HG03654.hp1 HG03831.hp1 others(6): Show HG00609.hp2 HG03654.hp1 HG03831.hp1 NA18950.hp1 NA18967.hp2 NA18968.hp1 NA19054.hp2 NA19078.hp1 NA19079.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0044 a0001c0001t0045 a0001c0001t0011 a0001c0001t0044 a0001c0001t0045	a0001c0001t0011g0012 a0001c0001t0011g0155 a0001c0001t0044g0154 others(1): Show a0001c0001t0011g0012 a0001c0001t0011g0155 a0001c0001t0044g0154 a0001c0001t0045g0156	9	466	0.0193	-4	c.-34 others(13): Show c.-341_-338delCTCT	C9orf152	ENSG00000188959.10	transcript	ENST00000400613.5	protein_coding	1/2	338	chr9	TogoVar
C9orf152_chr9_110194561_110213159	110207982	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG01993.hp2 HG01993.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0026 a0001c0001t0026	a0001c0001t0026g0060 a0001c0001t0026g0060	1	466	0.0022	0	c.-40 others(4): Show c.-403G>A	C9orf152	ENSG00000188959.10	transcript	ENST00000400613.5	protein_coding	1/2	403	chr9	TogoVar
C9orf152_chr9_110194561_110213159	110208002	G G	C C	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG01192.hp2 HG01243.hp2 HG02109.hp2 others(5): Show HG01192.hp2 HG01243.hp2 HG02109.hp2 HG02622.hp1 HG02622.hp2 HG02965.hp1 HG03540.hp2 HG06807.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0047 a0001c0002t0022 a0001c0002t0046 others(3): Show a0001c0001t0047 a0001c0002t0022 a0001c0002t0046 a0001c0003t0023 a0001c0003t0048 a0001c0003t0049	a0001c0001t0047g0158 a0001c0002t0022g0052 a0001c0002t0046g0157 others(3): Show a0001c0001t0047g0158 a0001c0002t0022g0052 a0001c0002t0046g0157 a0001c0003t0023g0053 a0001c0003t0048g0159 a0001c0003t0049g0160	8	466	0.0172	0	c.-42 others(4): Show c.-423C>G	C9orf152	ENSG00000188959.10	transcript	ENST00000400613.5	protein_coding	1/2	423	chr9	TogoVar
C9orf152_chr9_110194561_110213159	110208003	G G	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00280.hp1 HG00280.hp2 HG00423.hp2 others(93): Show HG00280.hp1 HG00280.hp2 HG00423.hp2 HG00621.hp2 HG00735.hp1 HG01099.hp1 HG01109.hp2 HG01243.hp1 HG01257.hp1 HG01258.hp2 HG01346.hp2 HG01884.hp2 HG01891.hp2 HG01928.hp2 HG01943.hp1 HG01952.hp1 HG02027.hp1 HG02027.hp2 HG02071.hp1 HG02074.hp1 HG02135.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02486.hp2 HG02602.hp1 HG02630.hp1 HG02647.hp1 HG02647.hp2 HG02886.hp1 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02965.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03130.hp1 HG03130.hp2 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03225.hp1 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03669.hp1 HG03688.hp1 HG04199.hp2 HG04228.hp2 NA18612.hp1 NA18906.hp2 NA18945.hp1 NA18946.hp1 NA18948.hp1 NA18949.hp2 NA18950.hp2 NA18951.hp1 NA18954.hp1 NA18955.hp1 NA18956.hp2 NA18957.hp1 NA18957.hp2 NA18964.hp2 NA18969.hp2 NA18971.hp2 NA18974.hp1 NA18975.hp2 NA18983.hp2 NA18987.hp1 NA18990.hp2 NA18992.hp1 NA18997.hp2 NA18999.hp2 NA19012.hp1 NA19030.hp1 NA19043.hp1 NA19059.hp2 NA19062.hp2 NA19084.hp1 NA19090.hp2 NA19240.hp1 NA20300.hp1 NA20752.hp2 NA20905.hp1 NA21309.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0004 a0001c0001t0018 a0001c0001t0024 others(9): Show a0001c0001t0004 a0001c0001t0018 a0001c0001t0024 a0001c0001t0050 a0001c0001t0056 a0001c0002t0004 a0001c0002t0005 a0001c0002t0051 a0001c0002t0052 a0001c0002t0053 a0001c0002t0054 a0001c0002t0055	a0001c0001t0004g0029 a0001c0001t0004g0171 a0001c0001t0018g0164 others(29): Show a0001c0001t0004g0029 a0001c0001t0004g0171 a0001c0001t0018g0164 a0001c0001t0018g0168 a0001c0001t0018g0169 a0001c0001t0024g0057 a0001c0001t0050g0162 a0001c0001t0056g0165 a0001c0002t0004g0003 a0001c0002t0004g0020 a0001c0002t0004g0031 a0001c0002t0004g0055 a0001c0002t0004g0056 a0001c0002t0004g0167 a0001c0002t0004g0174 a0001c0002t0004g0177 a0001c0002t0005g0006 a0001c0002t0005g0015 a0001c0002t0005g0030 a0001c0002t0005g0054 a0001c0002t0005g0058 a0001c0002t0005g0163 a0001c0002t0005g0170 a0001c0002t0005g0175 a0001c0002t0005g0176 a0001c0002t0005g0179 a0001c0002t0005g0180 a0001c0002t0051g0161 a0001c0002t0052g0172 a0001c0002t0053g0178 a0001c0002t0054g0173 a0001c0002t0055g0166	96	466	0.2060	0	c.-42 others(4): Show c.-424C>T	C9orf152	ENSG00000188959.10	transcript	ENST00000400613.5	protein_coding	1/2	424	chr9	TogoVar
C9orf152_chr9_110194561_110213159	110208068	A A	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA19043.hp2 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0025 a0001c0001t0025	a0001c0001t0025g0059 a0001c0001t0025g0059	1	466	0.0022	0	c.-48 others(4): Show c.-489T>A	C9orf152	ENSG00000188959.10	transcript	ENST00000400613.5	protein_coding	1/2	489	chr9	TogoVar
C9orf153_chr9_86215265_86264657	86229607	G G	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00597.hp1 HG00597.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0012 a0001c0001t0012	a0001c0001t0012g0132 a0001c0001t0012g0132	1	384	0.0026	0	c.-4C others(2): Show c.-4C>A	C9orf153	ENSG00000187753.13	transcript	ENST00000339137.7	protein_coding	2/4	4	chr9	TogoVar
C9orf153_chr9_86215265_86264657	86259572	T T	C C	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00099.hp1 HG00140.hp1 HG00323.hp1 others(178): Show HG00099.hp1 HG00140.hp1 HG00323.hp1 HG00438.hp1 HG00544.hp1 HG00544.hp2 HG00558.hp2 HG00597.hp1 HG00639.hp2 HG00642.hp1 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00741.hp2 HG01070.hp2 HG01099.hp2 HG01106.hp1 HG01109.hp1 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp2 HG01255.hp1 HG01255.hp2 HG01256.hp2 HG01257.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01361.hp2 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01516.hp2 HG01952.hp1 HG01952.hp2 HG01978.hp1 HG01981.hp1 HG01981.hp2 HG02015.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02074.hp1 HG02074.hp2 HG02129.hp1 HG02132.hp2 HG02135.hp1 HG02155.hp1 HG02155.hp2 HG02165.hp2 HG02257.hp2 HG02258.hp2 HG02280.hp2 HG02293.hp1 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02602.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02698.hp2 HG02717.hp1 HG02723.hp2 HG02738.hp2 HG02809.hp2 HG02818.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp2 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG03017.hp1 HG03041.hp1 HG03130.hp1 HG03139.hp1 HG03139.hp2 HG03225.hp2 HG03239.hp1 HG03453.hp1 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03491.hp1 HG03492.hp1 HG03492.hp2 HG03516.hp2 HG03540.hp1 HG03654.hp2 HG03669.hp1 HG03688.hp1 HG03688.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03942.hp1 HG03942.hp2 HG04115.hp2 HG04184.hp1 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 NA18522.hp1 NA18522.hp2 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18940.hp1 NA18940.hp2 NA18942.hp1 NA18945.hp2 NA18946.hp2 NA18947.hp1 NA18948.hp2 NA18950.hp1 NA18951.hp1 NA18952.hp1 NA18957.hp1 NA18957.hp2 NA18959.hp2 NA18960.hp1 NA18963.hp1 NA18966.hp1 NA18968.hp1 NA18969.hp2 NA18973.hp2 NA18974.hp1 NA18975.hp2 NA18977.hp1 NA18978.hp2 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18981.hp2 NA18985.hp2 NA18987.hp2 NA18989.hp2 NA18991.hp1 NA18992.hp1 NA18992.hp2 NA18995.hp2 NA18999.hp1 NA18999.hp2 NA19002.hp1 NA19009.hp2 NA19012.hp1 NA19030.hp1 NA19043.hp2 NA19056.hp2 NA19062.hp2 NA19066.hp1 NA19066.hp2 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19072.hp1 NA19074.hp1 NA19076.hp1 NA19076.hp2 NA19079.hp2 NA19080.hp1 NA19085.hp2 NA20129.hp1 NA20300.hp2 NA20752.hp1 NA20805.hp1 NA20805.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0002c0002 a0003c0003 a0001c0001 a0002c0002 a0003c0003	a0001c0001t0002 a0001c0001t0004 a0001c0001t0010 others(9): Show a0001c0001t0002 a0001c0001t0004 a0001c0001t0010 a0001c0001t0012 a0001c0001t0013 a0001c0001t0014 a0001c0001t0015 a0001c0001t0016 a0002c0002t0002 a0002c0002t0006 a0002c0002t0009 a0003c0003t0008	a0001c0001t0002g0002 a0001c0001t0002g0007 a0001c0001t0002g0008 others(163): Show a0001c0001t0002g0002 a0001c0001t0002g0007 a0001c0001t0002g0008 a0001c0001t0002g0010 a0001c0001t0002g0013 a0001c0001t0002g0014 a0001c0001t0002g0015 a0001c0001t0002g0016 a0001c0001t0002g0017 a0001c0001t0002g0031 a0001c0001t0002g0032 a0001c0001t0002g0033 a0001c0001t0002g0034 a0001c0001t0002g0035 a0001c0001t0002g0036 a0001c0001t0002g0038 a0001c0001t0002g0040 a0001c0001t0002g0042 a0001c0001t0002g0043 a0001c0001t0002g0044 a0001c0001t0002g0045 a0001c0001t0002g0046 a0001c0001t0002g0047 a0001c0001t0002g0048 a0001c0001t0002g0049 a0001c0001t0002g0050 a0001c0001t0002g0051 a0001c0001t0002g0052 a0001c0001t0002g0054 a0001c0001t0002g0055 a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0060 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0064 a0001c0001t0002g0065 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0070 a0001c0001t0002g0071 a0001c0001t0002g0072 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0076 a0001c0001t0002g0083 a0001c0001t0002g0086 a0001c0001t0002g0087 a0001c0001t0002g0088 a0001c0001t0002g0089 a0001c0001t0002g0090 a0001c0001t0002g0091 a0001c0001t0002g0092 a0001c0001t0002g0095 a0001c0001t0002g0096 a0001c0001t0002g0098 a0001c0001t0002g0099 a0001c0001t0002g0100 a0001c0001t0002g0101 a0001c0001t0002g0102 a0001c0001t0002g0103 a0001c0001t0002g0105 a0001c0001t0002g0106 a0001c0001t0002g0107 a0001c0001t0002g0108 a0001c0001t0002g0109 a0001c0001t0002g0110 a0001c0001t0002g0111 a0001c0001t0002g0112 a0001c0001t0002g0113 a0001c0001t0002g0114 a0001c0001t0002g0116 a0001c0001t0002g0117 a0001c0001t0002g0118 a0001c0001t0002g0119 a0001c0001t0002g0120 a0001c0001t0002g0121 a0001c0001t0002g0122 a0001c0001t0002g0123 a0001c0001t0002g0124 a0001c0001t0002g0125 a0001c0001t0002g0127 a0001c0001t0002g0128 a0001c0001t0002g0129 a0001c0001t0002g0130 a0001c0001t0002g0131 a0001c0001t0002g0133 a0001c0001t0002g0134 a0001c0001t0002g0135 a0001c0001t0002g0136 a0001c0001t0002g0137 a0001c0001t0002g0138 a0001c0001t0002g0139 a0001c0001t0002g0140 a0001c0001t0002g0141 a0001c0001t0002g0142 a0001c0001t0002g0143 a0001c0001t0002g0144 a0001c0001t0002g0145 a0001c0001t0002g0146 a0001c0001t0002g0147 a0001c0001t0002g0148 a0001c0001t0002g0150 a0001c0001t0002g0151 a0001c0001t0002g0152 a0001c0001t0002g0153 a0001c0001t0002g0154 a0001c0001t0002g0155 a0001c0001t0002g0156 a0001c0001t0002g0157 a0001c0001t0002g0159 a0001c0001t0002g0160 a0001c0001t0002g0162 a0001c0001t0002g0163 a0001c0001t0002g0164 a0001c0001t0002g0165 a0001c0001t0002g0166 a0001c0001t0002g0167 a0001c0001t0002g0168 a0001c0001t0002g0169 a0001c0001t0002g0170 a0001c0001t0002g0171 a0001c0001t0002g0172 a0001c0001t0002g0174 a0001c0001t0002g0175 a0001c0001t0002g0176 a0001c0001t0002g0177 a0001c0001t0002g0178 a0001c0001t0002g0179 a0001c0001t0002g0180 a0001c0001t0002g0181 a0001c0001t0002g0182 a0001c0001t0002g0183 a0001c0001t0004g0003 a0001c0001t0004g0009 a0001c0001t0004g0012 a0001c0001t0004g0037 a0001c0001t0004g0075 a0001c0001t0004g0077 a0001c0001t0004g0078 a0001c0001t0004g0079 a0001c0001t0004g0080 a0001c0001t0004g0081 a0001c0001t0004g0082 a0001c0001t0004g0084 a0001c0001t0004g0085 a0001c0001t0004g0097 a0001c0001t0004g0158 a0001c0001t0010g0041 a0001c0001t0010g0161 a0001c0001t0012g0132 a0001c0001t0013g0053 a0001c0001t0014g0104 a0001c0001t0015g0149 a0001c0001t0016g0126 a0002c0002t0002g0056 a0002c0002t0006g0093 a0002c0002t0006g0094 a0002c0002t0006g0115 a0002c0002t0009g0039 a0002c0002t0009g0173 a0003c0003t0008g0011	181	384	0.4714	0	c.-49 others(3): Show c.-49A>G	C9orf153	ENSG00000187753.13	transcript	ENST00000339137.7	protein_coding	1/4	29969	chr9	TogoVar
C9orf153_chr9_86215265_86264657	86259582	A A	G G	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00099.hp1 HG00140.hp1 HG00323.hp1 others(178): Show HG00099.hp1 HG00140.hp1 HG00323.hp1 HG00438.hp1 HG00544.hp1 HG00544.hp2 HG00558.hp2 HG00597.hp1 HG00639.hp2 HG00642.hp1 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00741.hp2 HG01070.hp2 HG01099.hp2 HG01106.hp1 HG01109.hp1 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp2 HG01255.hp1 HG01255.hp2 HG01256.hp2 HG01257.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01361.hp2 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01516.hp2 HG01952.hp1 HG01952.hp2 HG01978.hp1 HG01981.hp1 HG01981.hp2 HG02015.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02074.hp1 HG02074.hp2 HG02129.hp1 HG02132.hp2 HG02135.hp1 HG02155.hp1 HG02155.hp2 HG02165.hp2 HG02257.hp2 HG02258.hp2 HG02280.hp2 HG02293.hp1 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02602.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02698.hp2 HG02717.hp1 HG02723.hp2 HG02738.hp2 HG02809.hp2 HG02818.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp2 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG03017.hp1 HG03041.hp1 HG03130.hp1 HG03139.hp1 HG03139.hp2 HG03225.hp2 HG03239.hp1 HG03453.hp1 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03491.hp1 HG03492.hp1 HG03492.hp2 HG03516.hp2 HG03540.hp1 HG03654.hp2 HG03669.hp1 HG03688.hp1 HG03688.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03942.hp1 HG03942.hp2 HG04115.hp2 HG04184.hp1 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 NA18522.hp1 NA18522.hp2 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18940.hp1 NA18940.hp2 NA18942.hp1 NA18945.hp2 NA18946.hp2 NA18947.hp1 NA18948.hp2 NA18950.hp1 NA18951.hp1 NA18952.hp1 NA18957.hp1 NA18957.hp2 NA18959.hp2 NA18960.hp1 NA18963.hp1 NA18966.hp1 NA18968.hp1 NA18969.hp2 NA18973.hp2 NA18974.hp1 NA18975.hp2 NA18977.hp1 NA18978.hp2 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18981.hp2 NA18985.hp2 NA18987.hp2 NA18989.hp2 NA18991.hp1 NA18992.hp1 NA18992.hp2 NA18995.hp2 NA18999.hp1 NA18999.hp2 NA19002.hp1 NA19009.hp2 NA19012.hp1 NA19030.hp1 NA19043.hp2 NA19056.hp2 NA19062.hp2 NA19066.hp1 NA19066.hp2 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19072.hp1 NA19074.hp1 NA19076.hp1 NA19076.hp2 NA19079.hp2 NA19080.hp1 NA19085.hp2 NA20129.hp1 NA20300.hp2 NA20752.hp1 NA20805.hp1 NA20805.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0002c0002 a0003c0003 a0001c0001 a0002c0002 a0003c0003	a0001c0001t0002 a0001c0001t0004 a0001c0001t0010 others(9): Show a0001c0001t0002 a0001c0001t0004 a0001c0001t0010 a0001c0001t0012 a0001c0001t0013 a0001c0001t0014 a0001c0001t0015 a0001c0001t0016 a0002c0002t0002 a0002c0002t0006 a0002c0002t0009 a0003c0003t0008	a0001c0001t0002g0002 a0001c0001t0002g0007 a0001c0001t0002g0008 others(163): Show a0001c0001t0002g0002 a0001c0001t0002g0007 a0001c0001t0002g0008 a0001c0001t0002g0010 a0001c0001t0002g0013 a0001c0001t0002g0014 a0001c0001t0002g0015 a0001c0001t0002g0016 a0001c0001t0002g0017 a0001c0001t0002g0031 a0001c0001t0002g0032 a0001c0001t0002g0033 a0001c0001t0002g0034 a0001c0001t0002g0035 a0001c0001t0002g0036 a0001c0001t0002g0038 a0001c0001t0002g0040 a0001c0001t0002g0042 a0001c0001t0002g0043 a0001c0001t0002g0044 a0001c0001t0002g0045 a0001c0001t0002g0046 a0001c0001t0002g0047 a0001c0001t0002g0048 a0001c0001t0002g0049 a0001c0001t0002g0050 a0001c0001t0002g0051 a0001c0001t0002g0052 a0001c0001t0002g0054 a0001c0001t0002g0055 a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0060 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0064 a0001c0001t0002g0065 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0070 a0001c0001t0002g0071 a0001c0001t0002g0072 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0076 a0001c0001t0002g0083 a0001c0001t0002g0086 a0001c0001t0002g0087 a0001c0001t0002g0088 a0001c0001t0002g0089 a0001c0001t0002g0090 a0001c0001t0002g0091 a0001c0001t0002g0092 a0001c0001t0002g0095 a0001c0001t0002g0096 a0001c0001t0002g0098 a0001c0001t0002g0099 a0001c0001t0002g0100 a0001c0001t0002g0101 a0001c0001t0002g0102 a0001c0001t0002g0103 a0001c0001t0002g0105 a0001c0001t0002g0106 a0001c0001t0002g0107 a0001c0001t0002g0108 a0001c0001t0002g0109 a0001c0001t0002g0110 a0001c0001t0002g0111 a0001c0001t0002g0112 a0001c0001t0002g0113 a0001c0001t0002g0114 a0001c0001t0002g0116 a0001c0001t0002g0117 a0001c0001t0002g0118 a0001c0001t0002g0119 a0001c0001t0002g0120 a0001c0001t0002g0121 a0001c0001t0002g0122 a0001c0001t0002g0123 a0001c0001t0002g0124 a0001c0001t0002g0125 a0001c0001t0002g0127 a0001c0001t0002g0128 a0001c0001t0002g0129 a0001c0001t0002g0130 a0001c0001t0002g0131 a0001c0001t0002g0133 a0001c0001t0002g0134 a0001c0001t0002g0135 a0001c0001t0002g0136 a0001c0001t0002g0137 a0001c0001t0002g0138 a0001c0001t0002g0139 a0001c0001t0002g0140 a0001c0001t0002g0141 a0001c0001t0002g0142 a0001c0001t0002g0143 a0001c0001t0002g0144 a0001c0001t0002g0145 a0001c0001t0002g0146 a0001c0001t0002g0147 a0001c0001t0002g0148 a0001c0001t0002g0150 a0001c0001t0002g0151 a0001c0001t0002g0152 a0001c0001t0002g0153 a0001c0001t0002g0154 a0001c0001t0002g0155 a0001c0001t0002g0156 a0001c0001t0002g0157 a0001c0001t0002g0159 a0001c0001t0002g0160 a0001c0001t0002g0162 a0001c0001t0002g0163 a0001c0001t0002g0164 a0001c0001t0002g0165 a0001c0001t0002g0166 a0001c0001t0002g0167 a0001c0001t0002g0168 a0001c0001t0002g0169 a0001c0001t0002g0170 a0001c0001t0002g0171 a0001c0001t0002g0172 a0001c0001t0002g0174 a0001c0001t0002g0175 a0001c0001t0002g0176 a0001c0001t0002g0177 a0001c0001t0002g0178 a0001c0001t0002g0179 a0001c0001t0002g0180 a0001c0001t0002g0181 a0001c0001t0002g0182 a0001c0001t0002g0183 a0001c0001t0004g0003 a0001c0001t0004g0009 a0001c0001t0004g0012 a0001c0001t0004g0037 a0001c0001t0004g0075 a0001c0001t0004g0077 a0001c0001t0004g0078 a0001c0001t0004g0079 a0001c0001t0004g0080 a0001c0001t0004g0081 a0001c0001t0004g0082 a0001c0001t0004g0084 a0001c0001t0004g0085 a0001c0001t0004g0097 a0001c0001t0004g0158 a0001c0001t0010g0041 a0001c0001t0010g0161 a0001c0001t0012g0132 a0001c0001t0013g0053 a0001c0001t0014g0104 a0001c0001t0015g0149 a0001c0001t0016g0126 a0002c0002t0002g0056 a0002c0002t0006g0093 a0002c0002t0006g0094 a0002c0002t0006g0115 a0002c0002t0009g0039 a0002c0002t0009g0173 a0003c0003t0008g0011	181	384	0.4714	0	c.-59 others(3): Show c.-59T>C	C9orf153	ENSG00000187753.13	transcript	ENST00000339137.7	protein_coding	1/4	29979	chr9	TogoVar
C9orf24_chr9_34374019_34402810	34397683	G G	GCTGGACA others(33): Show GCTGGACATCAGTGACCACCCTTCCCCTAGACAGGCCACAC	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG01169.hp1 HG01169.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0004 a0001c0004t0004	a0001c0004t0004g0274 a0001c0004t0004g0274	1	450	0.0022	40	c.-90 others(47): Show c.-90_-51dupGTGTGGCCTGTCTAGGGGAAGGGTGGTCACTGATGTCC AG	C9orf24	ENSG00000164972.14	transcript	ENST00000297623.7	protein_coding	1/7	51	chr9	TogoVar
C9orf40_chr9_74941583_74957912	74952832	C C	G G	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA18947.hp1 NA18947.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0024 a0001c0001t0006g0024	1	410	0.0024	0	c.-22 others(4): Show c.-221G>C	C9orf40	ENSG00000135045.7	transcript	ENST00000376854.6	protein_coding	1/2	221	chr9	TogoVar
C9orf40_chr9_74941583_74957912	74952870	G G	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02486.hp1 HG02622.hp2 HG03098.hp1 others(2): Show HG02486.hp1 HG02622.hp2 HG03098.hp1 NA20129.hp2 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0005 a0001c0001t0002 a0001c0001t0005	a0001c0001t0002g0010 a0001c0001t0002g0022 a0001c0001t0005g0023 a0001c0001t0002g0010 a0001c0001t0002g0022 a0001c0001t0005g0023	5	410	0.0122	0	c.-25 others(4): Show c.-259C>A	C9orf40	ENSG00000135045.7	transcript	ENST00000376854.6	protein_coding	1/2	259	chr9	TogoVar
C9orf43_chr9_113405747_113434690	113410858	C C	G G	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG04199.hp2 HG04199.hp2	a0012 a0012	a0012c0007 a0012c0007	a0012c0007t0008 a0012c0007t0008	a0012c0007t0008g0003 a0012c0007t0008g0003	1	310	0.0032	0	c.-19 others(4): Show c.-193C>G	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	1/14	2636	chr9	TogoVar
C9orf43_chr9_113405747_113434690	113410901	T T	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02132.hp1 HG02148.hp2 HG03490.hp2 others(5): Show HG02132.hp1 HG02148.hp2 HG03490.hp2 HG03688.hp1 HG03688.hp2 NA18955.hp1 NA18983.hp1 NA20805.hp2	a0003 a0009 a0003 a0009	a0003c0003 a0009c0011 a0003c0003 a0009c0011	a0003c0003t0002 a0009c0011t0002 a0003c0003t0002 a0009c0011t0002	a0003c0003t0002g0006 a0003c0003t0002g0081 a0009c0011t0002g0006 a0003c0003t0002g0006 a0003c0003t0002g0081 a0009c0011t0002g0006	8	310	0.0258	0	c.-15 others(4): Show c.-150T>A	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	1/14	2593	chr9	TogoVar
C9orf43_chr9_113405747_113434690	113410926	G G	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02132.hp1 HG02148.hp2 HG03490.hp2 others(5): Show HG02132.hp1 HG02148.hp2 HG03490.hp2 HG03688.hp1 HG03688.hp2 NA18955.hp1 NA18983.hp1 NA20805.hp2	a0003 a0009 a0003 a0009	a0003c0003 a0009c0011 a0003c0003 a0009c0011	a0003c0003t0002 a0009c0011t0002 a0003c0003t0002 a0009c0011t0002	a0003c0003t0002g0006 a0003c0003t0002g0081 a0009c0011t0002g0006 a0003c0003t0002g0006 a0003c0003t0002g0081 a0009c0011t0002g0006	8	310	0.0258	0	c.-12 others(4): Show c.-125G>A	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	1/14	2568	chr9	TogoVar
C9orf43_chr9_113405747_113434690	113413491	G G	C C	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02148.hp1 HG02148.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0054 a0001c0001t0006g0054	1	310	0.0032	0	c.-3G others(2): Show c.-3G>C	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	2/14	3	chr9	TogoVar
C9orf50_chr9_129607225_129626101	129620596	A A	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00621.hp1 NA18994.hp2 NA19007.hp2 others(2): Show HG00621.hp1 NA18994.hp2 NA19007.hp2 NA19060.hp1 NA19081.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0005 a0003c0003t0005	a0003c0003t0005g0016 a0003c0003t0005g0028 a0003c0003t0005g0016 a0003c0003t0005g0028	5	410	0.0122	0	c.-22 others(3): Show c.-22T>A	C9orf50	ENSG00000179058.8	transcript	ENST00000372478.5	protein_coding	1/7	22	chr9	TogoVar
C9orf50_chr9_129607225_129626101	129620816	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00408.hp1 HG02055.hp1 HG02145.hp1 others(22): Show HG00408.hp1 HG02055.hp1 HG02145.hp1 HG02165.hp1 HG02615.hp1 HG02683.hp2 HG02723.hp2 HG03669.hp2 HG04228.hp1 NA18942.hp2 NA18945.hp2 NA18960.hp1 NA18966.hp1 NA18977.hp2 NA18980.hp1 NA18982.hp2 NA18983.hp2 NA18990.hp2 NA19003.hp2 NA19043.hp1 NA19060.hp2 NA19062.hp1 NA19063.hp2 NA19081.hp1 NA19086.hp1	a0004 a0005 a0011 others(1): Show a0004 a0005 a0011 a0017	a0004c0004 a0004c0024 a0005c0007 others(2): Show a0004c0004 a0004c0024 a0005c0007 a0011c0014 a0017c0023	a0004c0004t0003 a0004c0024t0006 a0005c0007t0004 others(2): Show a0004c0004t0003 a0004c0024t0006 a0005c0007t0004 a0011c0014t0004 a0017c0023t0003	a0004c0004t0003g0004 a0004c0004t0003g0043 a0004c0024t0006g0049 others(6): Show a0004c0004t0003g0004 a0004c0004t0003g0043 a0004c0024t0006g0049 a0005c0007t0004g0046 a0005c0007t0004g0047 a0005c0007t0004g0048 a0011c0014t0004g0044 a0011c0014t0004g0045 a0017c0023t0003g0042	25	410	0.0610	0	c.-24 others(4): Show c.-242G>A	C9orf50	ENSG00000179058.8	transcript	ENST00000372478.5	protein_coding	1/7	242	chr9	TogoVar
C9orf50_chr9_129607225_129626101	129621034	TG TG	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02055.hp1 HG02145.hp1 HG02615.hp1 others(2): Show HG02055.hp1 HG02145.hp1 HG02615.hp1 HG02723.hp2 NA19043.hp1	a0005 a0011 a0005 a0011	a0005c0007 a0011c0014 a0005c0007 a0011c0014	a0005c0007t0004 a0011c0014t0004 a0005c0007t0004 a0011c0014t0004	a0005c0007t0004g0046 a0005c0007t0004g0047 a0005c0007t0004g0048 others(2): Show a0005c0007t0004g0046 a0005c0007t0004g0047 a0005c0007t0004g0048 a0011c0014t0004g0044 a0011c0014t0004g0045	5	410	0.0122	-1	c.-46 others(5): Show c.-461delC	C9orf50	ENSG00000179058.8	transcript	ENST00000372478.5	protein_coding	1/7	461	chr9	TogoVar
C9orf50_chr9_129607225_129626101	129621064	A A	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00408.hp1 HG02165.hp1 HG02683.hp2 others(16): Show HG00408.hp1 HG02165.hp1 HG02683.hp2 HG04228.hp1 NA18942.hp2 NA18945.hp2 NA18960.hp1 NA18966.hp1 NA18977.hp2 NA18980.hp1 NA18982.hp2 NA18983.hp2 NA18990.hp2 NA19003.hp2 NA19060.hp2 NA19062.hp1 NA19063.hp2 NA19081.hp1 NA19086.hp1	a0004 a0017 a0004 a0017	a0004c0004 a0017c0023 a0004c0004 a0017c0023	a0004c0004t0003 a0017c0023t0003 a0004c0004t0003 a0017c0023t0003	a0004c0004t0003g0004 a0004c0004t0003g0043 a0017c0023t0003g0042 a0004c0004t0003g0004 a0004c0004t0003g0043 a0017c0023t0003g0042	19	410	0.0463	0	c.-49 others(4): Show c.-490T>A	C9orf50	ENSG00000179058.8	transcript	ENST00000372478.5	protein_coding	1/7	490	chr9	TogoVar
C9orf57_chr9_72046376_72065613	72059357	TGAAAG TGAAAG	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG01255.hp1 HG01891.hp2 HG02486.hp1 others(6): Show HG01255.hp1 HG01891.hp2 HG02486.hp1 HG02723.hp1 HG02886.hp1 HG02922.hp1 HG03195.hp1 HG03486.hp1 HG03516.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0069 a0001c0001t0003g0070 a0001c0001t0003g0275 others(4): Show a0001c0001t0003g0069 a0001c0001t0003g0070 a0001c0001t0003g0275 a0001c0001t0003g0276 a0001c0001t0003g0277 a0001c0001t0003g0278 a0001c0001t0003g0279	9	450	0.0200	-5	c.-31 others(12): Show c.-31_-27delCTTTC	C9orf57	ENSG00000204669.11	transcript	ENST00000651200.2	protein_coding	2/5	27	chr9	TogoVar
C9orf72_chr9_27541546_27578481	27567147	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00280.hp1 HG00558.hp1 HG00733.hp2 others(60): Show HG00280.hp1 HG00558.hp1 HG00733.hp2 HG00735.hp1 HG00741.hp1 HG01069.hp2 HG01070.hp2 HG01071.hp2 HG01074.hp2 HG01099.hp2 HG01123.hp1 HG01168.hp1 HG01175.hp1 HG01361.hp1 HG01496.hp2 HG01891.hp2 HG02027.hp2 HG02040.hp2 HG02129.hp2 HG02165.hp2 HG02300.hp2 HG02451.hp1 HG02572.hp1 HG02615.hp1 HG02683.hp1 HG02698.hp1 HG02738.hp2 HG03041.hp1 HG03098.hp1 HG03130.hp1 HG03139.hp1 HG03195.hp2 HG03209.hp1 HG03490.hp2 HG03491.hp2 HG03492.hp2 HG03516.hp2 HG03834.hp2 HG03927.hp2 HG03942.hp1 HG04228.hp2 NA18522.hp2 NA18747.hp1 NA18939.hp1 NA18942.hp2 NA18943.hp2 NA18944.hp2 NA18945.hp2 NA18948.hp2 NA18950.hp1 NA18952.hp1 NA18957.hp1 NA18962.hp2 NA18963.hp1 NA18984.hp1 NA19003.hp1 NA19006.hp1 NA19054.hp2 NA19058.hp2 NA19063.hp2 NA19077.hp1 NA19084.hp1 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0007 a0001c0001 a0001c0007	a0001c0001t0004 a0001c0001t0008 a0001c0001t0012 others(1): Show a0001c0001t0004 a0001c0001t0008 a0001c0001t0012 a0001c0007t0004	a0001c0001t0004g0002 a0001c0001t0004g0012 a0001c0001t0004g0016 others(28): Show a0001c0001t0004g0002 a0001c0001t0004g0012 a0001c0001t0004g0016 a0001c0001t0004g0017 a0001c0001t0004g0045 a0001c0001t0004g0046 a0001c0001t0004g0047 a0001c0001t0004g0181 a0001c0001t0004g0182 a0001c0001t0004g0183 a0001c0001t0004g0184 a0001c0001t0004g0185 a0001c0001t0004g0186 a0001c0001t0004g0187 a0001c0001t0004g0189 a0001c0001t0004g0190 a0001c0001t0004g0191 a0001c0001t0004g0192 a0001c0001t0004g0193 a0001c0001t0004g0194 a0001c0001t0004g0195 a0001c0001t0004g0196 a0001c0001t0004g0197 a0001c0001t0004g0198 a0001c0001t0004g0199 a0001c0001t0004g0200 a0001c0001t0004g0201 a0001c0001t0004g0208 a0001c0001t0008g0015 a0001c0001t0012g0239 a0001c0007t0004g0188	63	438	0.1438	0	c.-27 others(3): Show c.-27G>A	C9orf72	ENSG00000147894.17	transcript	ENST00000380003.8	protein_coding	2/11	27	chr9	TogoVar
C9orf72_chr9_27541546_27578481	27573469	A A	AGGCACCG others(7): Show AGGCACCGCAACCGC	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG01891.hp1 HG02451.hp2 HG02723.hp1 others(1): Show HG01891.hp1 HG02451.hp2 HG02723.hp1 HG03453.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0029 a0001c0001t0007g0053 a0001c0001t0007g0054 a0001c0001t0007g0029 a0001c0001t0007g0053 a0001c0001t0007g0054	4	438	0.0091	14	c.-97 others(21): Show c.-97_-84dupGCGGTTGCGGTGCC	C9orf72	ENSG00000147894.17	transcript	ENST00000380003.8	protein_coding	1/11	6350	chr9	TogoVar
C9orf85_chr9_71906639_71978457	71911699	G G	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG01175.hp1 HG03704.hp2 HG03834.hp1 others(3): Show HG01175.hp1 HG03704.hp2 HG03834.hp1 HG04184.hp2 HG04204.hp1 NA20752.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0007 a0001c0001t0003g0008 a0001c0001t0003g0207 others(1): Show a0001c0001t0003g0007 a0001c0001t0003g0008 a0001c0001t0003g0207 a0001c0001t0003g0208	6	250	0.0240	0	c.-36 others(3): Show c.-36G>T	C9orf85	ENSG00000155621.15	transcript	ENST00000334731.7	protein_coding	1/4	36	chr9	TogoVar
CA10_chr17_51625320_52163714	52157930	A A	G G	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA18982.hp2 NA18982.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0004 a0001c0001t0007g0004	1	156	0.0064	0	c.-14 others(4): Show c.-144T>C	CA10	ENSG00000154975.14	transcript	ENST00000451037.7	protein_coding	1/9	144	chr17	TogoVar
CA10_chr17_51625320_52163714	52158505	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG01891.hp1 HG03579.hp2 NA21309.hp1 HG01891.hp1 HG03579.hp2 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0006 a0001c0001t0005 a0001c0001t0006	a0001c0001t0005g0001 a0001c0001t0005g0003 a0001c0001t0006g0002 a0001c0001t0005g0001 a0001c0001t0005g0003 a0001c0001t0006g0002	3	156	0.0192	0	c.-71 others(4): Show c.-719G>A	CA10	ENSG00000154975.14	transcript	ENST00000451037.7	protein_coding	1/9	719	chr17	TogoVar
CA11_chr19_48632946_48651187	48645661	C C	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA18974.hp2 NA18974.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0056 a0001c0001t0004g0056	1	392	0.0026	0	c.-29 others(3): Show c.-29G>T	CA11	ENSG00000063180.9	transcript	ENST00000084798.9	protein_coding	1/9	29	chr19	TogoVar
CA11_chr19_48632946_48651187	48645788	GACTGA GACTGA	G G	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG01884.hp1 HG01891.hp1 HG02717.hp2 others(7): Show HG01884.hp1 HG01891.hp1 HG02717.hp2 HG02886.hp1 HG02922.hp2 HG03453.hp1 NA18906.hp1 NA19030.hp1 NA19030.hp2 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0025 a0001c0001t0002g0032 a0001c0001t0002g0057 others(4): Show a0001c0001t0002g0025 a0001c0001t0002g0032 a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0060 a0001c0001t0002g0061	10	392	0.0255	-5	c.-16 others(14): Show c.-161_-157delTCAGT	CA11	ENSG00000063180.9	transcript	ENST00000084798.9	protein_coding	1/9	157	chr19	TogoVar
CA11_chr19_48632946_48651187	48645835	T T	G G	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA18941.hp2 NA18941.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0164 a0001c0001t0006g0164	1	392	0.0026	0	c.-20 others(4): Show c.-203A>C	CA11	ENSG00000063180.9	transcript	ENST00000084798.9	protein_coding	1/9	203	chr19	TogoVar
CA11_chr19_48632946_48651187	48646095	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA18974.hp2 NA18974.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0056 a0001c0001t0004g0056	1	392	0.0026	0	c.-46 others(4): Show c.-463G>A	CA11	ENSG00000063180.9	transcript	ENST00000084798.9	protein_coding	1/9	463	chr19	TogoVar
CA11_chr19_48632946_48651187	48646123	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG01934.hp2 HG01934.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0055 a0001c0001t0003g0055	1	392	0.0026	0	c.-49 others(4): Show c.-491G>A	CA11	ENSG00000063180.9	transcript	ENST00000084798.9	protein_coding	1/9	491	chr19	TogoVar
CA13_chr8_85240458_85289073	85245482	G G	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG01258.hp1 HG01258.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0029 a0001c0001t0029	a0001c0001t0029g0034 a0001c0001t0029g0034	1	350	0.0029	0	c.-34 others(4): Show c.-347G>T	CA13	ENSG00000185015.8	transcript	ENST00000321764.4	protein_coding	1/7	347	chr8	TogoVar
CA13_chr8_85240458_85289073	85245533	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA18939.hp2 NA18943.hp2 NA18966.hp2 others(6): Show NA18939.hp2 NA18943.hp2 NA18966.hp2 NA18971.hp1 NA18993.hp1 NA19005.hp2 NA19012.hp2 NA19090.hp1 NA19091.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0028 a0001c0001t0006 a0001c0001t0028	a0001c0001t0006g0011 a0001c0001t0006g0015 a0001c0001t0006g0169 others(1): Show a0001c0001t0006g0011 a0001c0001t0006g0015 a0001c0001t0006g0169 a0001c0001t0028g0215	9	350	0.0257	0	c.-29 others(4): Show c.-296C>T	CA13	ENSG00000185015.8	transcript	ENST00000321764.4	protein_coding	1/7	296	chr8	TogoVar
CA13_chr8_85240458_85289073	85245743	G G	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA18941.hp1 NA18965.hp1 NA18979.hp1 others(3): Show NA18941.hp1 NA18965.hp1 NA18979.hp1 NA18989.hp1 NA19002.hp1 NA19011.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0002 a0001c0001t0008g0004 a0001c0001t0008g0121 a0001c0001t0008g0002 a0001c0001t0008g0004 a0001c0001t0008g0121	6	350	0.0171	0	c.-86 others(3): Show c.-86G>T	CA13	ENSG00000185015.8	transcript	ENST00000321764.4	protein_coding	1/7	86	chr8	TogoVar
CA14_chr1_150252774_150270078	150257929	C C	G G	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02683.hp2 HG02683.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0006 a0001c0002t0006	a0001c0002t0006g0004 a0001c0002t0006g0004	1	416	0.0024	0	c.-20 others(4): Show c.-200C>G	CA14	ENSG00000118298.12	transcript	ENST00000369111.9	protein_coding	1/11	200	chr1	TogoVar
CA14_chr1_150252774_150270078	150257933	G G	C C	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02257.hp1 HG02280.hp1 HG02647.hp2 others(4): Show HG02257.hp1 HG02280.hp1 HG02647.hp2 HG02970.hp1 HG03130.hp2 HG03540.hp2 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0011 a0001c0001t0004g0011	7	416	0.0168	0	c.-19 others(4): Show c.-196G>C	CA14	ENSG00000118298.12	transcript	ENST00000369111.9	protein_coding	1/11	196	chr1	TogoVar

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