regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
CNTNAP1_chr17_42677531_42704993 | 42689052 | C | T | splice_region_variant others(1): Show |
LOW | HG01167.hp1 HG01952.hp1 HG04184.hp2 |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0038a0001c0001t0002g0156 | 3 | 364 | 0.0082 | 0 | c.162 others(6): Show |
CNTNAP1 | ENSG00000108797.12 | transcript | ENST00000264638.9 | protein_coding | 10/23 | chr17 | TogoVar | ||||||
CNTNAP1_chr17_42677531_42704993 | 42697555 | G | A | splice_region_variant others(1): Show |
LOW | HG02132.hp1 HG02145.hp1 HG03704.hp1 others(7): Show |
a0001a0008 | a0001c0005a0001c0009a0001c0011others(1): Show | a0001c0005t0002a0001c0009t0001a0001c0011t0001others(1): Show | a0001c0005t0002g0023a0001c0005t0002g0113a0001c0005t0002g0119others(5): Show | 10 | 364 | 0.0275 | 0 | c.357 others(4): Show |
p.Glu others(7): Show |
CNTNAP1 | ENSG00000108797.12 | transcript | ENST00000264638.9 | protein_coding | 22/24 | 3869/5537 | 3570/4155 | 1190/1384 | chr17 | TogoVar | ||
CNTNAP2_chr7_146111801_148425998 | 147977856 | A | T | splice_region_variant others(1): Show |
LOW | HG02486.hp2 HG02717.hp1 HG02886.hp1 others(6): Show |
a0001a0002 | a0001c0001a0001c0003a0001c0008others(3): Show | a0001c0001t0012a0001c0001t0018a0001c0003t0004others(6): Show | a0001c0001t0012g0034a0001c0001t0018g0001a0001c0003t0004g0029others(6): Show | 9 | 40 | 0.2250 | 0 | c.225 others(6): Show |
CNTNAP2 | ENSG00000174469.23 | transcript | ENST00000361727.8 | protein_coding | 14/23 | chr7 | TogoVar | ||||||
CNTNAP2_chr7_146111801_148425998 | 148229642 | A | G | splice_region_variant others(1): Show |
LOW | HG03098.hp2 HG03139.hp1 NA18522.hp1 others(1): Show |
a0001 | a0001c0001a0001c0002a0001c0008others(1): Show | a0001c0001t0007a0001c0002t0001a0001c0008t0001others(1): Show | a0001c0001t0007g0018a0001c0002t0001g0021a0001c0008t0001g0025others(1): Show | 4 | 40 | 0.1000 | 0 | c.324 others(6): Show |
CNTNAP2 | ENSG00000174469.23 | transcript | ENST00000361727.8 | protein_coding | 19/23 | chr7 | TogoVar | ||||||
CNTNAP2_chr7_146111801_148425998 | 148267026 | C | T | splice_region_variant others(1): Show |
LOW | HG02897.hp1 HG02922.hp2 |
a0001 | a0001c0002a0001c0004 | a0001c0002t0001a0001c0004t0005 | a0001c0002t0001g0008a0001c0004t0005g0004 | 2 | 40 | 0.0500 | 0 | c.338 others(6): Show |
CNTNAP2 | ENSG00000174469.23 | transcript | ENST00000361727.8 | protein_coding | 20/23 | chr7 | TogoVar | ||||||
CNTNAP2_chr7_146111801_148425998 | 148409373 | C | CTCTT | splice_region_variant others(1): Show |
LOW | HG00735.hp2 HG01891.hp2 HG02451.hp1 others(19): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0008others(7): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0006others(14): Show | a0001c0001t0001g0003a0001c0001t0001g0038a0001c0001t0002g0006others(19): Show | 22 | 40 | 0.5500 | 4 | c.371 others(18): Show |
CNTNAP2 | ENSG00000174469.23 | transcript | ENST00000361727.8 | protein_coding | 22/23 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CNTNAP2_chr7_146111801_148425998 | 148409385 | C | G | splice_region_variant others(1): Show |
LOW | HG00735.hp2 HG01891.hp2 HG02451.hp1 others(19): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0008others(7): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0006others(14): Show | a0001c0001t0001g0003a0001c0001t0001g0038a0001c0001t0002g0006others(19): Show | 22 | 40 | 0.5500 | 0 | c.371 others(6): Show |
CNTNAP2 | ENSG00000174469.23 | transcript | ENST00000361727.8 | protein_coding | 22/23 | chr7 | TogoVar | ||||||
CNTNAP3B_chr9_41885536_42134426 | 41953185 | C | T | missense_variant others(1): Show |
MODERATE | HG00099.hp2 HG00280.hp1 HG00558.hp1 others(31): Show |
a0001a0006a0010others(3): Show | a0001c0001a0001c0012a0001c0042others(8): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0017others(13): Show | a0001c0001t0002g0002a0001c0001t0002g0004a0001c0001t0002g0005others(31): Show | 34 | 108 | 0.3148 | 0 | c.207 others(4): Show |
p.Arg others(6): Show |
CNTNAP3B | ENSG00000154529.15 | transcript | ENST00000377561.7 | protein_coding | 13/24 | 2410/7652 | 2078/3867 | 693/1288 | chr9 | TogoVar | ||
CNTNAP3B_chr9_41885536_42134426 | 42013531 | A | T | splice_region_variant others(1): Show |
LOW | HG02622.hp2 | a0026 | a0026c0025 | a0026c0025t0019 | a0026c0025t0019g0028 | 1 | 108 | 0.0093 | 0 | c.391 others(5): Show |
CNTNAP3B | ENSG00000154529.15 | transcript | ENST00000377561.7 | protein_coding | 3/23 | chr9 | TogoVar | ||||||
CNTNAP3_chr9_39059710_39293167 | 39103746 | C | T | missense_variant others(1): Show |
MODERATE | HG02109.hp1 | a0002 | a0002c0003 | a0002c0003t0004 | a0002c0003t0004g0001 | 1 | 4 | 0.2500 | 0 | c.253 others(4): Show |
p.Arg others(6): Show |
CNTNAP3 | ENSG00000106714.18 | transcript | ENST00000297668.11 | protein_coding | 16/24 | 2637/13150 | 2534/3867 | 845/1288 | chr9 | TogoVar | ||
CNTNAP4_chr16_76272401_76565757 | 76449861 | G | A | splice_region_variant others(1): Show |
LOW | HG02809.hp1 HG03540.hp1 |
a0026a0027 | a0026c0041a0027c0040 | a0026c0041t0004a0027c0040t0001 | a0026c0041t0004g0193a0027c0040t0001g0267 | 2 | 274 | 0.0073 | 0 | c.107 others(6): Show |
CNTNAP4 | ENSG00000152910.19 | transcript | ENST00000611870.5 | protein_coding | 7/23 | chr16 | TogoVar | ||||||
CNTNAP4_chr16_76272401_76565757 | 76476051 | C | T | splice_region_variant others(1): Show |
LOW | HG02698.hp2 HG02723.hp1 HG02886.hp2 others(7): Show |
a0001a0002a0003others(1): Show | a0001c0015a0002c0002a0002c0012others(4): Show | a0001c0015t0006a0002c0002t0002a0002c0002t0028others(6): Show | a0001c0015t0006g0166a0002c0002t0002g0128a0002c0002t0028g0239others(7): Show | 10 | 274 | 0.0365 | 0 | c.176 others(6): Show |
CNTNAP4 | ENSG00000152910.19 | transcript | ENST00000611870.5 | protein_coding | 11/23 | chr16 | TogoVar | ||||||
CNTNAP4_chr16_76272401_76565757 | 76479537 | C | G | splice_region_variant others(1): Show |
LOW | NA18991.hp1 | a0022 | a0022c0025 | a0022c0025t0002 | a0022c0025t0002g0110 | 1 | 274 | 0.0037 | 0 | c.188 others(4): Show |
p.Thr others(6): Show |
CNTNAP4 | ENSG00000152910.19 | transcript | ENST00000611870.5 | protein_coding | 12/24 | 2143/6263 | 1881/3927 | 627/1308 | chr16 | TogoVar | ||
CNTNAP4_chr16_76272401_76565757 | 76479538 | G | C | missense_variant others(1): Show |
MODERATE | NA18991.hp1 | a0022 | a0022c0025 | a0022c0025t0002 | a0022c0025t0002g0110 | 1 | 274 | 0.0037 | 0 | c.188 others(4): Show |
p.Glu others(6): Show |
CNTNAP4 | ENSG00000152910.19 | transcript | ENST00000611870.5 | protein_coding | 12/24 | 2144/6263 | 1882/3927 | 628/1308 | chr16 | TogoVar | ||
CNTNAP5_chr2_124020287_124926219 | 124524296 | C | T | splice_region_variant others(1): Show |
LOW | HG02922.hp2 NA20300.hp1 |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0022a0001c0001t0002g0023 | 2 | 64 | 0.0313 | 0 | c.132 others(6): Show |
CNTNAP5 | ENSG00000155052.15 | transcript | ENST00000682447.1 | protein_coding | 8/23 | chr2 | TogoVar | ||||||
CNTRL_chr9_121069955_121182610 | 121118341 | A | G | splice_region_variant others(1): Show |
LOW | NA18968.hp1 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0078 | 1 | 330 | 0.0030 | 0 | c.145 others(6): Show |
CNTRL | ENSG00000119397.19 | transcript | ENST00000373855.7 | protein_coding | 11/43 | chr9 | TogoVar | ||||||
CNTRL_chr9_121069955_121182610 | 121135981 | A | G | missense_variant others(1): Show |
MODERATE | NA19043.hp2 | a0015 | a0015c0024 | a0015c0024t0001 | a0015c0024t0001g0031 | 1 | 330 | 0.0030 | 0 | c.220 others(4): Show |
p.Gln others(6): Show |
CNTRL | ENSG00000119397.19 | transcript | ENST00000373855.7 | protein_coding | 15/44 | 2518/7719 | 2201/6978 | 734/2325 | chr9 | TogoVar | ||
CNTRL_chr9_121069955_121182610 | 121145244 | T | G | missense_variant others(1): Show |
MODERATE | HG02809.hp2 HG02965.hp1 HG03471.hp2 |
a0010a0020 | a0010c0014a0020c0034 | a0010c0014t0001a0020c0034t0001 | a0010c0014t0001g0167a0010c0014t0001g0169a0020c0034t0001g0168 | 3 | 330 | 0.0091 | 0 | c.316 others(4): Show |
p.Phe others(7): Show |
CNTRL | ENSG00000119397.19 | transcript | ENST00000373855.7 | protein_coding | 22/44 | 3486/7719 | 3169/6978 | 1057/2325 | chr9 | TogoVar | ||
CNTRL_chr9_121069955_121182610 | 121164944 | G | T | missense_variant others(1): Show |
MODERATE | NA18950.hp1 NA18977.hp1 NA18985.hp1 others(2): Show |
a0005 | a0005c0008 | a0005c0008t0001 | a0005c0008t0001g0062a0005c0008t0001g0073a0005c0008t0001g0076others(2): Show | 5 | 330 | 0.0152 | 0 | c.542 others(4): Show |
p.Val others(7): Show |
CNTRL | ENSG00000119397.19 | transcript | ENST00000373855.7 | protein_coding | 35/44 | 5742/7719 | 5425/6978 | 1809/2325 | chr9 | TogoVar | ||
CNTROB_chr17_7927206_7954920 | 7944465 | CT | C | splice_region_variant others(1): Show |
LOW | NA18942.hp1 NA18967.hp1 NA19087.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0110a0001c0001t0001g0114a0001c0001t0001g0119 | 3 | 402 | 0.0075 | -1 | c.157 others(7): Show |
CNTROB | ENSG00000170037.14 | transcript | ENST00000563694.6 | protein_coding | 11/18 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |||||
CNTROB_chr17_7927206_7954920 | 7944637 | C | A | missense_variant others(1): Show |
MODERATE | HG00099.hp1 HG00140.hp1 HG00280.hp1 others(251): Show |
a0001a0007a0008others(4): Show | a0001c0001a0001c0012a0001c0014others(7): Show | a0001c0001t0001a0001c0001t0004a0001c0001t0005others(12): Show | a0001c0001t0001g0002a0001c0001t0001g0003a0001c0001t0001g0004others(130): Show | 254 | 402 | 0.6318 | 0 | c.173 others(4): Show |
p.Pro others(6): Show |
CNTROB | ENSG00000170037.14 | transcript | ENST00000563694.6 | protein_coding | 12/19 | 2607/3996 | 1733/2712 | 578/903 | chr17 | TogoVar | ||
COA1_chr7_43634257_43734523 | 43729430 | T | C | splice_region_variant | LOW | NA18747.hp1 | a0001 | a0001c0001 | a0001c0001t0005 | a0001c0001t0005g0378 | 1 | 384 | 0.0026 | 0 | c.-40 others(3): Show |
COA1 | ENSG00000106603.20 | transcript | ENST00000223336.11 | protein_coding | 1/6 | chr7 | TogoVar | ||||||
COA4_chr11_73867667_73881846 | 73873393 | G | C | splice_region_variant | LOW | HG03209.hp2 | a0001 | a0001c0001 | a0001c0001t0004 | a0001c0001t0004g0021 | 1 | 394 | 0.0025 | 0 | c.-15 others(3): Show |
COA4 | ENSG00000181924.7 | transcript | ENST00000355693.5 | protein_coding | 2/2 | chr11 | TogoVar | ||||||
COA6_chr1_234368456_234390080 | 234374226 | A | G | splice_region_variant others(1): Show |
LOW | HG00438.hp2 HG00741.hp1 HG01081.hp1 others(42): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0007others(1): Show | a0001c0001t0001g0006a0001c0001t0001g0007a0001c0001t0001g0010others(21): Show | 45 | 406 | 0.1108 | 0 | c.213 others(5): Show |
COA6 | ENSG00000168275.16 | transcript | ENST00000366615.10 | protein_coding | 1/2 | chr1 | TogoVar | ||||||
COA6_chr1_234368456_234390080 | 234383706 | C | CT | splice_region_variant others(1): Show |
LOW | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(239): Show |
a0001a0002a0003others(1): Show | a0001c0001a0002c0002a0003c0003others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(9): Show | a0001c0001t0001g0005a0001c0001t0001g0006a0001c0001t0001g0007others(111): Show | 242 | 406 | 0.5961 | 1 | c.373 others(6): Show |
COA6 | ENSG00000168275.16 | transcript | ENST00000366615.10 | protein_coding | 2/2 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
COA6_chr1_234368456_234390080 | 234385080 | A | G | splice_region_variant | LOW | HG02109.hp2 HG03704.hp1 |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0007a0002c0002t0008 | a0001c0001t0007g0006a0002c0002t0008g0012 | 2 | 406 | 0.0049 | 0 | c.*12 others(5): Show |
COA6 | ENSG00000168275.16 | transcript | ENST00000366615.10 | protein_coding | 3/3 | chr1 | TogoVar | ||||||
COA8_chr14_103557960_103595896 | 103574078 | C | CT | splice_region_variant others(1): Show |
LOW | HG00280.hp1 HG01071.hp1 HG01256.hp2 others(26): Show |
a0001a0002 | a0001c0001a0001c0009a0002c0002 | a0001c0001t0001a0001c0009t0001a0002c0002t0001 | a0001c0001t0001g0189a0001c0001t0001g0194a0001c0001t0001g0264others(26): Show | 29 | 382 | 0.0759 | 1 | c.322 others(6): Show |
COA8 | ENSG00000256053.9 | transcript | ENST00000409074.8 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | |||||
COA8_chr14_103557960_103595896 | 103574078 | C | CTT | splice_region_variant others(1): Show |
LOW | HG00140.hp2 HG00423.hp2 HG00741.hp2 others(61): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0006a0002c0002t0001a0002c0002t0004 | a0001c0001t0006g0106a0002c0002t0001g0003a0002c0002t0001g0006others(50): Show | 64 | 382 | 0.1675 | 2 | c.322 others(13): Show |
COA8 | ENSG00000256053.9 | transcript | ENST00000409074.8 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | |||||
COA8_chr14_103557960_103595896 | 103574078 | C | CTTT | splice_region_variant others(1): Show |
LOW | HG01081.hp1 HG01175.hp2 NA18945.hp2 others(4): Show |
a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0109a0002c0002t0001g0113a0002c0002t0001g0137others(4): Show | 7 | 382 | 0.0183 | 3 | c.322 others(14): Show |
COA8 | ENSG00000256053.9 | transcript | ENST00000409074.8 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | |||||
COA8_chr14_103557960_103595896 | 103574078 | CT | C | splice_region_variant others(1): Show |
LOW | HG00140.hp1 HG00280.hp2 HG00323.hp1 others(109): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0003a0001c0006others(5): Show | a0001c0001t0001a0001c0003t0001a0001c0006t0001others(6): Show | a0001c0001t0001g0017a0001c0001t0001g0025a0001c0001t0001g0181others(92): Show | 112 | 382 | 0.2932 | -1 | c.322 others(6): Show |
COA8 | ENSG00000256053.9 | transcript | ENST00000409074.8 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | |||||
COA8_chr14_103557960_103595896 | 103574078 | CTT | C | splice_region_variant others(1): Show |
LOW | HG00099.hp1 HG00099.hp2 HG00639.hp1 others(10): Show |
a0001a0004 | a0001c0003a0001c0006a0004c0005 | a0001c0003t0001a0001c0006t0001a0004c0005t0001 | a0001c0003t0001g0039a0001c0003t0001g0040a0001c0003t0001g0041others(10): Show | 13 | 382 | 0.0340 | -2 | c.322 others(13): Show |
COA8 | ENSG00000256053.9 | transcript | ENST00000409074.8 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | |||||
COASY_chr17_42557148_42571277 | 42563962 | C | A | missense_variant others(1): Show |
MODERATE | NA18954.hp2 | a0003 | a0003c0008 | a0003c0008t0001 | a0003c0008t0001g0001 | 1 | 394 | 0.0025 | 0 | c.702 others(3): Show |
p.Ser others(6): Show |
COASY | ENSG00000068120.15 | transcript | ENST00000393818.3 | protein_coding | 2/9 | 1177/2479 | 702/1695 | 234/564 | chr17 | TogoVar | ||
COASY_chr17_42557148_42571277 | 42564576 | A | G | missense_variant others(1): Show |
MODERATE | NA19057.hp1 | a0004 | a0004c0011 | a0004c0011t0001 | a0004c0011t0001g0001 | 1 | 394 | 0.0025 | 0 | c.104 others(4): Show |
p.Tyr others(6): Show |
COASY | ENSG00000068120.15 | transcript | ENST00000393818.3 | protein_coding | 3/9 | 1521/2479 | 1046/1695 | 349/564 | chr17 | TogoVar | ||
COASY_chr17_42557148_42571277 | 42565318 | G | T | splice_region_variant others(1): Show |
LOW | NA19055.hp2 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0008 | 1 | 394 | 0.0025 | 0 | c.138 others(6): Show |
COASY | ENSG00000068120.15 | transcript | ENST00000393818.3 | protein_coding | 6/8 | chr17 | TogoVar | ||||||
COASY_chr17_42557148_42571277 | 42565654 | C | G | splice_region_variant others(1): Show |
LOW | HG00323.hp2 HG00735.hp2 HG01358.hp1 others(4): Show |
a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0005 | 7 | 394 | 0.0178 | 0 | c.148 others(6): Show |
COASY | ENSG00000068120.15 | transcript | ENST00000393818.3 | protein_coding | 7/8 | chr17 | TogoVar | ||||||
COBLL1_chr2_164675188_164846823 | 164695843 | GA | G | splice_region_variant others(1): Show |
LOW | HG00639.hp1 HG01069.hp2 HG01071.hp1 others(26): Show |
a0001a0002a0014 | a0001c0001a0001c0002a0002c0003others(2): Show | a0001c0001t0018a0001c0001t0033a0001c0002t0013others(9): Show | a0001c0001t0018g0167a0001c0001t0018g0168a0001c0001t0033g0052others(25): Show | 29 | 212 | 0.1368 | -1 | c.155 others(7): Show |
COBLL1 | ENSG00000082438.18 | transcript | ENST00000652658.2 | protein_coding | 11/13 | chr2 | TogoVar | ||||||
COBLL1_chr2_164675188_164846823 | 164722071 | A | G | splice_region_variant others(1): Show |
LOW | HG00099.hp1 HG00140.hp1 HG00280.hp2 others(157): Show |
a0001a0002a0003others(13): Show | a0001c0001a0001c0002a0001c0010others(24): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(64): Show | a0001c0001t0001g0015a0001c0001t0001g0026a0001c0001t0001g0030others(155): Show | 160 | 212 | 0.7547 | 0 | c.996 others(5): Show |
COBLL1 | ENSG00000082438.18 | transcript | ENST00000652658.2 | protein_coding | 7/13 | chr2 | TogoVar | ||||||
COBLL1_chr2_164675188_164846823 | 164722317 | A | G | splice_region_variant others(1): Show |
LOW | HG01346.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0145 | 1 | 212 | 0.0047 | 0 | c.760 others(5): Show |
COBLL1 | ENSG00000082438.18 | transcript | ENST00000652658.2 | protein_coding | 6/13 | chr2 | TogoVar | ||||||
COBLL1_chr2_164675188_164846823 | 164841156 | C | T | missense_variant others(1): Show |
MODERATE | HG02056.hp2 NA18963.hp1 |
a0006 | a0006c0008 | a0006c0008t0001 | a0006c0008t0001g0009a0006c0008t0001g0010 | 2 | 212 | 0.0094 | 0 | c.41G others(2): Show |
p.Arg others(5): Show |
COBLL1 | ENSG00000082438.18 | transcript | ENST00000652658.2 | protein_coding | 2/14 | 205/9309 | 41/3387 | 14/1128 | chr2 | TogoVar | ||
COBL_chr7_51011212_51321809 | 51017576 | G | A | splice_region_variant others(1): Show |
LOW | NA18988.hp2 | a0002 | a0002c0007 | a0002c0007t0001 | a0002c0007t0001g0174 | 1 | 230 | 0.0044 | 0 | c.376 others(6): Show |
COBL | ENSG00000106078.19 | transcript | ENST00000265136.12 | protein_coding | 12/12 | chr7 | TogoVar | ||||||
COCH_chr14_30869559_30895618 | 30889618 | A | T | missense_variant others(1): Show |
MODERATE | NA19089.hp1 | a0007 | a0007c0009 | a0007c0009t0001 | a0007c0009t0001g0324 | 1 | 478 | 0.0021 | 0 | c.148 others(4): Show |
p.Ile others(6): Show |
COCH | ENSG00000100473.18 | transcript | ENST00000396618.9 | protein_coding | 12/12 | 1536/2536 | 1480/1653 | 494/550 | chr14 | TogoVar | ||
COG2_chr1_230637481_230698982 | 230693981 | CA | C | splice_region_variant | LOW | HG00408.hp2 HG00423.hp2 HG00438.hp1 others(119): Show |
a0001a0002a0003others(2): Show | a0001c0002a0001c0020a0002c0023others(3): Show | a0001c0002t0003a0001c0002t0004a0001c0020t0004others(4): Show | a0001c0002t0003g0003a0001c0002t0003g0007a0001c0002t0003g0021others(85): Show | 122 | 406 | 0.3005 | -1 | c.*58 others(5): Show |
COG2 | ENSG00000135775.14 | transcript | ENST00000366669.9 | protein_coding | 18/18 | chr1 | TogoVar | ||||||
COG3_chr13_45459939_45541701 | 45481232 | G | A | splice_region_variant others(1): Show |
LOW | NA18945.hp1 | a0001 | a0001c0010 | a0001c0010t0001 | a0001c0010t0001g0128 | 1 | 342 | 0.0029 | 0 | c.552 others(3): Show |
p.Ser others(6): Show |
COG3 | ENSG00000136152.15 | transcript | ENST00000349995.10 | protein_coding | 5/23 | 650/4555 | 552/2487 | 184/828 | chr13 | TogoVar | ||
COG3_chr13_45459939_45541701 | 45503246 | G | A | splice_region_variant others(1): Show |
LOW | HG00099.hp1 HG00099.hp2 HG00280.hp2 others(307): Show |
a0001a0002a0003others(3): Show | a0001c0001a0001c0002a0001c0008others(13): Show | a0001c0001t0001a0001c0001t0005a0001c0001t0006others(24): Show | a0001c0001t0001g0003a0001c0001t0001g0040a0001c0001t0001g0041others(300): Show | 310 | 342 | 0.9064 | 0 | c.149 others(4): Show |
p.Gln others(6): Show |
COG3 | ENSG00000136152.15 | transcript | ENST00000349995.10 | protein_coding | 14/23 | 1589/4555 | 1491/2487 | 497/828 | chr13 | TogoVar | ||
COG3_chr13_45459939_45541701 | 45524972 | T | C | splice_region_variant others(1): Show |
LOW | HG02723.hp1 HG03471.hp2 |
a0002 | a0002c0005 | a0002c0005t0003 | a0002c0005t0003g0010a0002c0005t0003g0192 | 2 | 342 | 0.0059 | 0 | c.215 others(6): Show |
COG3 | ENSG00000136152.15 | transcript | ENST00000349995.10 | protein_coding | 19/22 | chr13 | TogoVar | ||||||
COG4_chr16_70475571_70528554 | 70500950 | G | A | splice_region_variant others(1): Show |
LOW | HG01891.hp1 HG02109.hp1 HG02280.hp2 others(7): Show |
a0001 | a0001c0003 | a0001c0003t0001 | a0001c0003t0001g0014a0001c0003t0001g0015a0001c0003t0001g0016others(7): Show | 10 | 354 | 0.0283 | 0 | c.119 others(6): Show |
COG4 | ENSG00000103051.21 | transcript | ENST00000323786.10 | protein_coding | 9/18 | chr16 | TogoVar | ||||||
COG6_chr13_39650662_39757628 | 39724483 | CT | C | splice_region_variant others(1): Show |
LOW | HG00140.hp2 HG00280.hp1 HG00280.hp2 others(217): Show |
a0001a0002a0003others(4): Show | a0001c0001a0001c0006a0001c0011others(7): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(19): Show | a0001c0001t0001g0002a0001c0001t0001g0005a0001c0001t0001g0006others(204): Show | 220 | 370 | 0.5946 | -1 | c.169 others(7): Show |
COG6 | ENSG00000133103.17 | transcript | ENST00000455146.8 | protein_coding | 16/18 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |||||
COG6_chr13_39650662_39757628 | 39724501 | TA | T | splice_region_variant others(1): Show |
LOW | HG00099.hp1 HG00099.hp2 HG00323.hp2 others(135): Show |
a0001a0002a0004others(1): Show | a0001c0001a0002c0002a0002c0007others(2): Show | a0001c0001t0001a0001c0001t0004a0002c0002t0002others(7): Show | a0001c0001t0001g0107a0001c0001t0001g0108a0001c0001t0001g0109others(134): Show | 138 | 370 | 0.3730 | -1 | c.169 others(7): Show |
COG6 | ENSG00000133103.17 | transcript | ENST00000455146.8 | protein_coding | 16/18 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |||||
COG6_chr13_39650662_39757628 | 39724502 | A | T | splice_region_variant others(1): Show |
LOW | NA20805.hp2 | a0002 | a0002c0002 | a0002c0002t0002 | a0002c0002t0002g0236 | 1 | 370 | 0.0027 | 0 | c.169 others(6): Show |
COG6 | ENSG00000133103.17 | transcript | ENST00000455146.8 | protein_coding | 16/18 | chr13 | TogoVar | ||||||
COG7_chr16_23383493_23458189 | 23445164 | C | T | missense_variant others(1): Show |
MODERATE | HG02630.hp2 | a0003 | a0003c0005 | a0003c0005t0003 | a0003c0005t0003g0135 | 1 | 272 | 0.0037 | 0 | c.319 others(3): Show |
p.Val others(6): Show |
COG7 | ENSG00000168434.13 | transcript | ENST00000307149.10 | protein_coding | 3/17 | 514/2935 | 319/2313 | 107/770 | chr16 | TogoVar |