regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
COIL_chr17_56933199_56966050 | 56949675 | A | G | splice_region_variant others(1): Show |
LOW | NA18951.hp2 NA18972.hp1 NA18978.hp1 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0054a0001c0001t0001g0219a0001c0001t0001g0221others(1): Show | 5 | 418 | 0.0120 | 0 | c.144 others(6): Show |
COIL | ENSG00000121058.5 | transcript | ENST00000240316.5 | protein_coding | 3/6 | chr17 | TogoVar | ||||||
COL11A1_chr1_102871473_103113522 | 102913693 | A | G | splice_region_variant others(1): Show |
LOW | HG02647.hp1 | a0004 | a0004c0014 | a0004c0014t0001 | a0004c0014t0001g0013 | 1 | 184 | 0.0054 | 0 | c.397 others(6): Show |
COL11A1 | ENSG00000060718.22 | transcript | ENST00000370096.9 | protein_coding | 52/66 | chr1 | TogoVar | ||||||
COL11A1_chr1_102871473_103113522 | 102979108 | G | A | splice_region_variant others(1): Show |
LOW | HG02258.hp1 HG02647.hp2 HG02809.hp2 others(4): Show |
a0001a0004a0019 | a0001c0006a0004c0014a0019c0020 | a0001c0006t0001a0001c0006t0003a0004c0014t0001others(1): Show | a0001c0006t0001g0034a0001c0006t0001g0036a0001c0006t0001g0045others(4): Show | 7 | 184 | 0.0380 | 0 | c.261 others(6): Show |
COL11A1 | ENSG00000060718.22 | transcript | ENST00000370096.9 | protein_coding | 32/66 | chr1 | TogoVar | ||||||
COL11A1_chr1_102871473_103113522 | 103002739 | C | T | splice_region_variant others(1): Show |
LOW | HG01109.hp1 HG01884.hp2 HG02257.hp2 others(15): Show |
a0001a0003a0004others(2): Show | a0001c0008a0001c0009a0003c0026others(3): Show | a0001c0008t0006a0001c0009t0001a0001c0009t0007others(4): Show | a0001c0008t0006g0002a0001c0008t0006g0003a0001c0008t0006g0004others(15): Show | 18 | 184 | 0.0978 | 0 | c.204 others(6): Show |
COL11A1 | ENSG00000060718.22 | transcript | ENST00000370096.9 | protein_coding | 22/66 | chr1 | TogoVar | ||||||
COL11A1_chr1_102871473_103113522 | 103003211 | A | T | splice_region_variant others(1): Show |
LOW | HG01071.hp1 HG01243.hp1 HG01433.hp2 others(10): Show |
a0002a0008a0017 | a0002c0001a0002c0033a0008c0018others(1): Show | a0002c0001t0001a0002c0001t0002a0002c0033t0013others(2): Show | a0002c0001t0001g0100a0002c0001t0001g0110a0002c0001t0002g0097others(10): Show | 13 | 184 | 0.0707 | 0 | c.199 others(6): Show |
COL11A1 | ENSG00000060718.22 | transcript | ENST00000370096.9 | protein_coding | 21/66 | chr1 | TogoVar | ||||||
COL11A1_chr1_102871473_103113522 | 103003275 | G | T | splice_region_variant others(1): Show |
LOW | HG02145.hp2 HG03209.hp1 |
a0001 | a0001c0019 | a0001c0019t0003 | a0001c0019t0003g0051a0001c0019t0003g0054 | 2 | 184 | 0.0109 | 0 | c.194 others(6): Show |
COL11A1 | ENSG00000060718.22 | transcript | ENST00000370096.9 | protein_coding | 20/66 | chr1 | TogoVar | ||||||
COL11A1_chr1_102871473_103113522 | 103031249 | G | GA | splice_region_variant others(1): Show |
LOW | HG00408.hp2 HG00735.hp2 HG02027.hp1 others(9): Show |
a0001a0002a0006others(1): Show | a0001c0005a0002c0024a0006c0039others(1): Show | a0001c0005t0005a0001c0005t0012a0002c0024t0002others(2): Show | a0001c0005t0005g0061a0001c0005t0005g0070a0001c0005t0005g0071others(9): Show | 12 | 184 | 0.0652 | 1 | c.652 others(6): Show |
COL11A1 | ENSG00000060718.22 | transcript | ENST00000370096.9 | protein_coding | 4/66 | chr1 | TogoVar | ||||||
COL11A1_chr1_102871473_103113522 | 103031249 | G | GAAA | splice_region_variant others(1): Show |
LOW | HG01109.hp1 HG01884.hp2 HG02257.hp2 others(11): Show |
a0001a0003a0004others(2): Show | a0001c0008a0003c0026a0004c0012others(2): Show | a0001c0008t0006a0003c0026t0002a0004c0012t0003others(2): Show | a0001c0008t0006g0002a0001c0008t0006g0003a0001c0008t0006g0004others(11): Show | 14 | 184 | 0.0761 | 3 | c.652 others(14): Show |
COL11A1 | ENSG00000060718.22 | transcript | ENST00000370096.9 | protein_coding | 4/66 | chr1 | TogoVar | ||||||
COL11A1_chr1_102871473_103113522 | 103031249 | G | GGAA | splice_region_variant others(1): Show |
LOW | HG03453.hp2 HG03471.hp1 NA18906.hp1 others(1): Show |
a0001 | a0001c0009 | a0001c0009t0001a0001c0009t0007 | a0001c0009t0001g0008a0001c0009t0007g0055a0001c0009t0007g0056others(1): Show | 4 | 184 | 0.0217 | 3 | c.652 others(14): Show |
COL11A1 | ENSG00000060718.22 | transcript | ENST00000370096.9 | protein_coding | 4/66 | chr1 | TogoVar | ||||||
COL11A1_chr1_102871473_103113522 | 103031249 | GA | G | splice_region_variant others(1): Show |
LOW | HG00140.hp1 HG00140.hp2 HG00323.hp1 others(108): Show |
a0001a0002a0003others(8): Show | a0001c0002a0001c0004a0001c0006others(20): Show | a0001c0002t0001a0001c0002t0002a0001c0002t0003others(26): Show | a0001c0002t0001g0069a0001c0002t0002g0155a0001c0002t0003g0019others(108): Show | 111 | 184 | 0.6033 | -1 | c.652 others(6): Show |
COL11A1 | ENSG00000060718.22 | transcript | ENST00000370096.9 | protein_coding | 4/66 | chr1 | TogoVar | ||||||
COL11A1_chr1_102871473_103113522 | 103031249 | GAA | G | splice_region_variant others(1): Show |
LOW | HG02965.hp1 HG03225.hp1 HG03471.hp2 others(2): Show |
a0001 | a0001c0002a0001c0006 | a0001c0002t0001a0001c0002t0008a0001c0006t0001 | a0001c0002t0001g0095a0001c0002t0008g0027a0001c0006t0001g0017others(2): Show | 5 | 184 | 0.0272 | -2 | c.652 others(13): Show |
COL11A1 | ENSG00000060718.22 | transcript | ENST00000370096.9 | protein_coding | 4/66 | chr1 | TogoVar | ||||||
COL11A1_chr1_102871473_103113522 | 103074787 | A | C | splice_region_variant others(1): Show |
LOW | HG02257.hp1 | a0001 | a0001c0016 | a0001c0016t0001 | a0001c0016t0001g0050 | 1 | 184 | 0.0054 | 0 | c.489 others(5): Show |
COL11A1 | ENSG00000060718.22 | transcript | ENST00000370096.9 | protein_coding | 3/66 | chr1 | TogoVar | ||||||
COL11A1_chr1_102871473_103113522 | 103078878 | A | G | splice_region_variant others(1): Show |
LOW | HG01071.hp1 HG01109.hp1 HG01243.hp1 others(24): Show |
a0001a0002a0003others(3): Show | a0001c0005a0001c0008a0001c0009others(6): Show | a0001c0005t0004a0001c0008t0006a0001c0009t0001others(8): Show | a0001c0005t0004g0015a0001c0008t0006g0002a0001c0008t0006g0003others(24): Show | 27 | 184 | 0.1467 | 0 | c.275 others(5): Show |
COL11A1 | ENSG00000060718.22 | transcript | ENST00000370096.9 | protein_coding | 2/66 | chr1 | TogoVar | ||||||
COL11A2_chr6_33157694_33197467 | 33163823 | A | C | splice_region_variant others(1): Show |
LOW | HG03017.hp1 | a0015 | a0015c0016 | a0015c0016t0001 | a0015c0016t0001g0145 | 1 | 367 | 0.0027 | 0 | c.507 others(6): Show |
COL11A2 | ENSG00000204248.12 | transcript | ENST00000341947.7 | protein_coding | 65/65 | chr6 | TogoVar | ||||||
COL11A2_chr6_33157694_33197467 | 33164479 | A | AGGAGAGA others(45): Show |
splice_region_variant others(1): Show |
LOW | HG02738.hp2 HG03017.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0039 | 2 | 367 | 0.0055 | 52 | c.486 others(66): Show |
COL11A2 | ENSG00000204248.12 | transcript | ENST00000341947.7 | protein_coding | 64/65 | chr6 | TogoVar | ||||||
COL11A2_chr6_33157694_33197467 | 33167541 | A | G | splice_region_variant others(1): Show |
LOW | HG01255.hp2 | a0001 | a0001c0025 | a0001c0025t0001 | a0001c0025t0001g0059 | 1 | 367 | 0.0027 | 0 | c.401 others(6): Show |
COL11A2 | ENSG00000204248.12 | transcript | ENST00000341947.7 | protein_coding | 55/65 | chr6 | TogoVar | ||||||
COL11A2_chr6_33157694_33197467 | 33170105 | A | G | splice_region_variant others(1): Show |
LOW | HG01891.hp1 | a0001 | a0001c0006 | a0001c0006t0001 | a0001c0006t0001g0120 | 1 | 367 | 0.0027 | 0 | c.358 others(6): Show |
COL11A2 | ENSG00000204248.12 | transcript | ENST00000341947.7 | protein_coding | 48/65 | chr6 | TogoVar | ||||||
COL11A2_chr6_33157694_33197467 | 33173503 | G | A | missense_variant others(1): Show |
MODERATE | HG00280.hp1 HG00323.hp1 HG01167.hp1 others(38): Show |
a0003 | a0003c0003a0003c0030 | a0003c0003t0001a0003c0030t0001 | a0003c0003t0001g0002a0003c0003t0001g0007a0003c0003t0001g0029others(8): Show | 41 | 367 | 0.1117 | 0 | c.268 others(4): Show |
p.Pro others(6): Show |
COL11A2 | ENSG00000204248.12 | transcript | ENST00000341947.7 | protein_coding | 36/66 | 2908/6422 | 2681/5211 | 894/1736 | chr6 | TogoVar | ||
COL11A2_chr6_33157694_33197467 | 33173698 | C | T | splice_region_variant others(1): Show |
LOW | HG00099.hp1 HG00099.hp2 HG00140.hp2 others(248): Show |
a0001a0002a0004others(9): Show | a0001c0001a0001c0006a0001c0008others(21): Show | a0001c0001t0001a0001c0001t0002a0001c0006t0001others(26): Show | a0001c0001t0001g0001a0001c0001t0001g0006a0001c0001t0001g0014others(100): Show | 251 | 367 | 0.6839 | 0 | c.262 others(6): Show |
COL11A2 | ENSG00000204248.12 | transcript | ENST00000341947.7 | protein_coding | 35/65 | chr6 | TogoVar | ||||||
COL11A2_chr6_33157694_33197467 | 33176714 | A | G | splice_region_variant others(1): Show |
LOW | HG03098.hp2 HG03225.hp2 |
a0001a0010 | a0001c0031a0010c0026 | a0001c0031t0001a0010c0026t0001 | a0001c0031t0001g0144a0010c0026t0001g0143 | 2 | 367 | 0.0055 | 0 | c.211 others(6): Show |
COL11A2 | ENSG00000204248.12 | transcript | ENST00000341947.7 | protein_coding | 26/65 | chr6 | TogoVar | ||||||
COL11A2_chr6_33157694_33197467 | 33179812 | T | G | splice_region_variant others(1): Show |
LOW | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(364): Show |
a0001a0002a0003others(12): Show | a0001c0001a0001c0004a0001c0006others(31): Show | a0001c0001t0001a0001c0001t0002a0001c0004t0001others(37): Show | a0001c0001t0001g0001a0001c0001t0001g0006a0001c0001t0001g0014others(144): Show | 367 | 367 | 1.0000 | 0 | c.136 others(6): Show |
COL11A2 | ENSG00000204248.12 | transcript | ENST00000341947.7 | protein_coding | 12/65 | chr6 | TogoVar | ||||||
COL11A2_chr6_33157694_33197467 | 33185058 | A | T | splice_region_variant others(1): Show |
LOW | HG00099.hp1 HG00099.hp2 HG00280.hp2 others(92): Show |
a0002a0005a0007others(2): Show | a0002c0002a0002c0005a0002c0020others(6): Show | a0002c0002t0001a0002c0002t0006a0002c0002t0007others(10): Show | a0002c0002t0001g0003a0002c0002t0001g0011a0002c0002t0001g0016others(34): Show | 95 | 367 | 0.2589 | 0 | c.877 others(5): Show |
COL11A2 | ENSG00000204248.12 | transcript | ENST00000341947.7 | protein_coding | 6/65 | chr6 | TogoVar | ||||||
COL11A2_chr6_33157694_33197467 | 33189322 | G | T | missense_variant others(1): Show |
MODERATE | HG03017.hp1 | a0015 | a0015c0016 | a0015c0016t0001 | a0015c0016t0001g0145 | 1 | 367 | 0.0027 | 0 | c.230 others(3): Show |
p.Pro others(5): Show |
COL11A2 | ENSG00000204248.12 | transcript | ENST00000341947.7 | protein_coding | 2/66 | 457/6422 | 230/5211 | 77/1736 | chr6 | TogoVar | ||
COL12A1_chr6_75079326_75211053 | 75181216 | TTAA | T | splice_region_variant others(1): Show |
LOW | HG02976.hp1 HG03195.hp1 |
a0002a0005 | a0002c0017a0005c0016 | a0002c0017t0002a0005c0016t0006 | a0002c0017t0002g0037a0005c0016t0006g0028 | 2 | 206 | 0.0097 | -3 | c.189 others(16): Show |
COL12A1 | ENSG00000111799.22 | transcript | ENST00000322507.13 | protein_coding | 10/65 | chr6 | TogoVar | ||||||
COL12A1_chr6_75079326_75211053 | 75181217 | T | TA | splice_region_variant others(1): Show |
LOW | HG00408.hp1 HG00408.hp2 HG00438.hp1 others(139): Show |
a0001a0002a0003others(17): Show | a0001c0001a0001c0005a0001c0019others(33): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(51): Show | a0001c0001t0001g0004a0001c0001t0001g0009a0001c0001t0001g0011others(136): Show | 142 | 206 | 0.6893 | 1 | c.189 others(7): Show |
COL12A1 | ENSG00000111799.22 | transcript | ENST00000322507.13 | protein_coding | 10/65 | chr6 | TogoVar | ||||||
COL12A1_chr6_75079326_75211053 | 75181217 | T | TAA | splice_region_variant others(1): Show |
LOW | HG02486.hp2 HG02698.hp2 HG03491.hp1 others(3): Show |
a0001a0002a0004 | a0001c0001a0002c0002a0004c0004 | a0001c0001t0001a0001c0001t0004a0002c0002t0001others(1): Show | a0001c0001t0001g0059a0001c0001t0001g0144a0001c0001t0004g0013others(3): Show | 6 | 206 | 0.0291 | 2 | c.189 others(15): Show |
COL12A1 | ENSG00000111799.22 | transcript | ENST00000322507.13 | protein_coding | 10/65 | chr6 | TogoVar | ||||||
COL12A1_chr6_75079326_75211053 | 75181217 | TA | T | splice_region_variant others(1): Show |
LOW | HG00621.hp1 HG01109.hp2 HG02015.hp1 others(38): Show |
a0001a0002a0003others(10): Show | a0001c0001a0001c0005a0001c0045others(14): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(22): Show | a0001c0001t0001g0159a0001c0001t0001g0160a0001c0001t0001g0161others(38): Show | 41 | 206 | 0.1990 | -1 | c.189 others(7): Show |
COL12A1 | ENSG00000111799.22 | transcript | ENST00000322507.13 | protein_coding | 10/65 | chr6 | TogoVar | ||||||
COL13A1_chr10_69796906_69964144 | 69880499 | G | A | splice_region_variant others(1): Show |
LOW | HG00280.hp1 HG00408.hp1 HG00544.hp1 others(104): Show |
a0001a0002a0004others(3): Show | a0001c0001a0001c0002a0001c0003others(10): Show | a0001c0001t0001a0001c0001t0002a0001c0002t0001others(19): Show | a0001c0001t0001g0013a0001c0001t0001g0014a0001c0001t0001g0036others(104): Show | 107 | 324 | 0.3303 | 0 | c.463 others(5): Show |
COL13A1 | ENSG00000197467.17 | transcript | ENST00000645393.2 | protein_coding | 6/40 | chr10 | TogoVar | ||||||
COL13A1_chr10_69796906_69964144 | 69887440 | G | GT | splice_region_variant others(1): Show |
LOW | HG00323.hp1 HG00673.hp2 HG00741.hp2 others(10): Show |
a0001a0004 | a0001c0001a0001c0002a0001c0004others(2): Show | a0001c0001t0001a0001c0002t0001a0001c0002t0003others(5): Show | a0001c0001t0001g0003a0001c0001t0001g0039a0001c0001t0001g0081others(10): Show | 13 | 324 | 0.0401 | 1 | c.514 others(6): Show |
COL13A1 | ENSG00000197467.17 | transcript | ENST00000645393.2 | protein_coding | 7/40 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | |||||
COL13A1_chr10_69796906_69964144 | 69887440 | GT | G | splice_region_variant others(1): Show |
LOW | HG01069.hp1 HG01071.hp1 HG01109.hp2 others(17): Show |
a0001a0002a0003 | a0001c0006a0001c0007a0001c0009others(4): Show | a0001c0006t0001a0001c0006t0002a0001c0007t0001others(8): Show | a0001c0006t0001g0008a0001c0006t0001g0009a0001c0006t0001g0012others(17): Show | 20 | 324 | 0.0617 | -1 | c.514 others(6): Show |
COL13A1 | ENSG00000197467.17 | transcript | ENST00000645393.2 | protein_coding | 7/40 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | |||||
COL13A1_chr10_69796906_69964144 | 69887491 | G | A | splice_region_variant others(1): Show |
LOW | NA18980.hp2 | a0001 | a0001c0016 | a0001c0016t0001 | a0001c0016t0001g0049 | 1 | 324 | 0.0031 | 0 | c.549 others(3): Show |
p.Pro others(6): Show |
COL13A1 | ENSG00000197467.17 | transcript | ENST00000645393.2 | protein_coding | 8/41 | 1067/3148 | 549/2187 | 183/728 | chr10 | TogoVar | ||
COL13A1_chr10_69796906_69964144 | 69902853 | C | T | missense_variant others(1): Show |
MODERATE | HG01346.hp1 | a0010 | a0010c0018 | a0010c0018t0006 | a0010c0018t0006g0007 | 1 | 324 | 0.0031 | 0 | c.856 others(3): Show |
p.Pro others(6): Show |
COL13A1 | ENSG00000197467.17 | transcript | ENST00000645393.2 | protein_coding | 15/41 | 1374/3148 | 856/2187 | 286/728 | chr10 | TogoVar | ||
COL13A1_chr10_69796906_69964144 | 69918322 | G | A | splice_region_variant others(1): Show |
LOW | HG03540.hp1 | a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0291 | 1 | 324 | 0.0031 | 0 | c.999 others(5): Show |
COL13A1 | ENSG00000197467.17 | transcript | ENST00000645393.2 | protein_coding | 19/40 | chr10 | TogoVar | ||||||
COL13A1_chr10_69796906_69964144 | 69925801 | C | T | splice_region_variant others(1): Show |
LOW | HG00099.hp1 HG01192.hp1 HG02257.hp1 others(6): Show |
a0001a0002a0011 | a0001c0001a0001c0002a0002c0024others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0002t0004others(3): Show | a0001c0001t0001g0141a0001c0001t0001g0194a0001c0001t0001g0202others(6): Show | 9 | 324 | 0.0278 | 0 | c.133 others(6): Show |
COL13A1 | ENSG00000197467.17 | transcript | ENST00000645393.2 | protein_coding | 25/40 | chr10 | TogoVar | ||||||
COL13A1_chr10_69796906_69964144 | 69935391 | G | A | splice_region_variant others(1): Show |
LOW | HG02257.hp1 HG03195.hp1 |
a0002 | a0002c0024a0002c0030 | a0002c0024t0003a0002c0030t0001 | a0002c0024t0003g0264a0002c0030t0001g0309 | 2 | 324 | 0.0062 | 0 | c.177 others(4): Show |
p.Pro others(6): Show |
COL13A1 | ENSG00000197467.17 | transcript | ENST00000645393.2 | protein_coding | 32/41 | 2288/3148 | 1770/2187 | 590/728 | chr10 | TogoVar | ||
COL13A1_chr10_69796906_69964144 | 69937632 | C | T | splice_region_variant others(1): Show |
LOW | HG01192.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0194 | 1 | 324 | 0.0031 | 0 | c.179 others(6): Show |
COL13A1 | ENSG00000197467.17 | transcript | ENST00000645393.2 | protein_coding | 33/40 | chr10 | TogoVar | ||||||
COL13A1_chr10_69796906_69964144 | 69956997 | C | T | splice_region_variant others(1): Show |
LOW | HG01346.hp1 HG01358.hp1 HG02165.hp2 others(1): Show |
a0001a0010 | a0001c0001a0001c0002a0010c0018 | a0001c0001t0006a0001c0002t0006a0001c0002t0015others(1): Show | a0001c0001t0006g0063a0001c0002t0006g0287a0001c0002t0015g0253others(1): Show | 4 | 324 | 0.0124 | 0 | c.214 others(6): Show |
COL13A1 | ENSG00000197467.17 | transcript | ENST00000645393.2 | protein_coding | 39/40 | chr10 | TogoVar | ||||||
COL14A1_chr8_120120102_120378573 | 120206935 | T | A | splice_region_variant others(1): Show |
LOW | HG00408.hp2 HG02132.hp2 NA18979.hp1 |
a0003 | a0003c0004 | a0003c0004t0001 | a0003c0004t0001g0167a0003c0004t0001g0169a0003c0004t0001g0170 | 3 | 218 | 0.0138 | 0 | c.104 others(6): Show |
COL14A1 | ENSG00000187955.13 | transcript | ENST00000297848.8 | protein_coding | 9/47 | chr8 | TogoVar | ||||||
COL14A1_chr8_120120102_120378573 | 120209753 | C | T | splice_region_variant others(1): Show |
LOW | HG02523.hp1 | a0007 | a0007c0018 | a0007c0018t0001 | a0007c0018t0001g0171 | 1 | 218 | 0.0046 | 0 | c.132 others(6): Show |
COL14A1 | ENSG00000187955.13 | transcript | ENST00000297848.8 | protein_coding | 11/47 | chr8 | TogoVar | ||||||
COL14A1_chr8_120120102_120378573 | 120247735 | G | A | missense_variant others(1): Show |
MODERATE | HG03540.hp1 | a0010 | a0010c0022 | a0010c0022t0001 | a0010c0022t0001g0135 | 1 | 218 | 0.0046 | 0 | c.260 others(4): Show |
p.Val others(6): Show |
COL14A1 | ENSG00000187955.13 | transcript | ENST00000297848.8 | protein_coding | 21/48 | 2878/8009 | 2602/5391 | 868/1796 | chr8 | TogoVar | ||
COL14A1_chr8_120120102_120378573 | 120255359 | G | A | splice_region_variant others(1): Show |
LOW | HG02970.hp2 | a0001 | a0001c0014 | a0001c0014t0004 | a0001c0014t0004g0009 | 1 | 218 | 0.0046 | 0 | c.286 others(6): Show |
COL14A1 | ENSG00000187955.13 | transcript | ENST00000297848.8 | protein_coding | 23/47 | chr8 | TogoVar | ||||||
COL14A1_chr8_120120102_120378573 | 120280708 | C | T | splice_region_variant others(1): Show |
LOW | HG01517.hp1 HG02602.hp2 |
a0002a0014 | a0002c0002a0014c0038 | a0002c0002t0001a0014c0038t0001 | a0002c0002t0001g0118a0014c0038t0001g0031 | 2 | 218 | 0.0092 | 0 | c.364 others(6): Show |
COL14A1 | ENSG00000187955.13 | transcript | ENST00000297848.8 | protein_coding | 29/47 | chr8 | TogoVar | ||||||
COL14A1_chr8_120120102_120378573 | 120280903 | CTT | C | splice_region_variant others(1): Show |
LOW | HG00140.hp1 HG00438.hp2 HG00544.hp1 others(111): Show |
a0001a0002a0006others(5): Show | a0001c0001a0001c0003a0001c0005others(22): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(39): Show | a0001c0001t0001g0001a0001c0001t0001g0013a0001c0001t0001g0034others(111): Show | 114 | 218 | 0.5229 | -2 | c.368 others(15): Show |
COL14A1 | ENSG00000187955.13 | transcript | ENST00000297848.8 | protein_coding | 30/47 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | |||||
COL14A1_chr8_120120102_120378573 | 120280903 | CTTT | C | splice_region_variant others(1): Show |
LOW | HG02896.hp1 HG02897.hp1 HG02976.hp1 others(2): Show |
a0002 | a0002c0002a0002c0033 | a0002c0002t0001a0002c0033t0001 | a0002c0002t0001g0007a0002c0002t0001g0008a0002c0002t0001g0207others(2): Show | 5 | 218 | 0.0229 | -3 | c.368 others(16): Show |
COL14A1 | ENSG00000187955.13 | transcript | ENST00000297848.8 | protein_coding | 30/47 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | |||||
COL14A1_chr8_120120102_120378573 | 120342382 | T | C | splice_region_variant others(1): Show |
LOW | HG01169.hp2 HG02723.hp1 HG02922.hp2 others(6): Show |
a0001a0002a0005 | a0001c0013a0001c0014a0002c0037others(2): Show | a0001c0013t0004a0001c0014t0004a0001c0014t0012others(3): Show | a0001c0013t0004g0071a0001c0013t0004g0085a0001c0014t0004g0009others(6): Show | 9 | 218 | 0.0413 | 0 | c.482 others(4): Show |
p.Gly others(7): Show |
COL14A1 | ENSG00000187955.13 | transcript | ENST00000297848.8 | protein_coding | 44/48 | 5100/8009 | 4824/5391 | 1608/1796 | chr8 | TogoVar | ||
COL14A1_chr8_120120102_120378573 | 120371146 | C | T | splice_region_variant others(1): Show |
LOW | HG02572.hp2 HG03098.hp1 HG03195.hp1 |
a0001a0003 | a0001c0001a0003c0010 | a0001c0001t0002a0003c0010t0002 | a0001c0001t0002g0032a0001c0001t0002g0072a0003c0010t0002g0078 | 3 | 218 | 0.0138 | 0 | c.531 others(6): Show |
COL14A1 | ENSG00000187955.13 | transcript | ENST00000297848.8 | protein_coding | 47/47 | chr8 | TogoVar | ||||||
COL15A1_chr9_98938907_99075787 | 99020374 | ATCT | A | splice_region_variant others(1): Show |
LOW | NA18948.hp1 NA18950.hp2 NA18979.hp2 others(1): Show |
a0003 | a0003c0006 | a0003c0006t0001 | a0003c0006t0001g0095a0003c0006t0001g0096a0003c0006t0001g0097others(1): Show | 4 | 310 | 0.0129 | -3 | c.164 others(16): Show |
COL15A1 | ENSG00000204291.12 | transcript | ENST00000375001.8 | protein_coding | 11/41 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | |||||
COL15A1_chr9_98938907_99075787 | 99022156 | A | G | splice_region_variant others(1): Show |
LOW | HG00408.hp1 HG00423.hp1 HG00438.hp1 others(64): Show |
a0001a0003a0004others(7): Show | a0001c0001a0001c0031a0003c0004others(12): Show | a0001c0001t0002a0001c0031t0001a0003c0004t0001others(15): Show | a0001c0001t0002g0190a0001c0031t0001g0205a0003c0004t0001g0030others(64): Show | 67 | 310 | 0.2161 | 0 | c.176 others(6): Show |
COL15A1 | ENSG00000204291.12 | transcript | ENST00000375001.8 | protein_coding | 13/41 | chr9 | TogoVar | ||||||
COL15A1_chr9_98938907_99075787 | 99023351 | T | C | splice_region_variant others(1): Show |
LOW | HG00280.hp1 HG00438.hp2 HG00597.hp2 others(74): Show |
a0001a0002a0003others(18): Show | a0001c0001a0001c0013a0002c0002others(25): Show | a0001c0001t0002a0001c0013t0001a0002c0002t0001others(27): Show | a0001c0001t0002g0059a0001c0001t0002g0070a0001c0013t0001g0064others(74): Show | 77 | 310 | 0.2484 | 0 | c.176 others(6): Show |
COL15A1 | ENSG00000204291.12 | transcript | ENST00000375001.8 | protein_coding | 13/41 | chr9 | TogoVar | ||||||
COL15A1_chr9_98938907_99075787 | 99024998 | C | T | missense_variant others(1): Show |
MODERATE | HG00408.hp2 NA19074.hp2 |
a0034a0040 | a0034c0042a0040c0056 | a0034c0042t0001a0040c0056t0002 | a0034c0042t0001g0133a0040c0056t0002g0009 | 2 | 310 | 0.0065 | 0 | c.197 others(4): Show |
p.Pro others(6): Show |
COL15A1 | ENSG00000204291.12 | transcript | ENST00000375001.8 | protein_coding | 15/42 | 2134/5223 | 1979/4167 | 660/1388 | chr9 | TogoVar |