regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
COL20A1_chr20_63288186_63339806 | 63307491 | C | A | splice_region_variant others(1): Show |
LOW | HG00544.hp2 HG00621.hp1 HG01261.hp1 others(6): Show |
a0001a0028 | a0001c0005a0028c0019 | a0001c0005t0001a0001c0005t0002a0001c0005t0012others(1): Show | a0001c0005t0001g0229a0001c0005t0002g0046a0001c0005t0002g0061others(5): Show | 9 | 290 | 0.0310 | 0 | c.498 others(3): Show |
p.Ala others(6): Show |
COL20A1 | ENSG00000101203.17 | transcript | ENST00000358894.11 | protein_coding | 6/36 | 598/8045 | 498/3855 | 166/1284 | chr20 | TogoVar | ||
COL20A1_chr20_63288186_63339806 | 63307491 | C | T | splice_region_variant others(1): Show |
LOW | HG04204.hp1 | a0001 | a0001c0044 | a0001c0044t0005 | a0001c0044t0005g0167 | 1 | 290 | 0.0035 | 0 | c.498 others(3): Show |
p.Ala others(6): Show |
COL20A1 | ENSG00000101203.17 | transcript | ENST00000358894.11 | protein_coding | 6/36 | 598/8045 | 498/3855 | 166/1284 | chr20 | TogoVar | ||
COL20A1_chr20_63288186_63339806 | 63320195 | G | A | missense_variant others(1): Show |
MODERATE | HG01433.hp2 | a0028 | a0028c0019 | a0028c0019t0005 | a0028c0019t0005g0183 | 1 | 290 | 0.0035 | 0 | c.307 others(4): Show |
p.Ala others(7): Show |
COL20A1 | ENSG00000101203.17 | transcript | ENST00000358894.11 | protein_coding | 24/36 | 3173/8045 | 3073/3855 | 1025/1284 | chr20 | TogoVar | ||
COL20A1_chr20_63288186_63339806 | 63322054 | G | A | splice_region_variant others(1): Show |
LOW | HG03942.hp2 | a0016 | a0016c0024 | a0016c0024t0033 | a0016c0024t0033g0042 | 1 | 290 | 0.0035 | 0 | c.324 others(6): Show |
COL20A1 | ENSG00000101203.17 | transcript | ENST00000358894.11 | protein_coding | 26/35 | chr20 | TogoVar | ||||||
COL20A1_chr20_63288186_63339806 | 63325726 | C | T | splice_region_variant others(1): Show |
LOW | HG01433.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0177 | 1 | 290 | 0.0035 | 0 | c.340 others(6): Show |
COL20A1 | ENSG00000101203.17 | transcript | ENST00000358894.11 | protein_coding | 29/35 | chr20 | TogoVar | ||||||
COL21A1_chr6_56051590_56252580 | 56059162 | C | T | splice_region_variant others(1): Show |
LOW | HG02559.hp2 HG02809.hp1 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0006 | a0001c0001t0001g0101a0001c0001t0006g0022 | 2 | 264 | 0.0076 | 0 | c.268 others(6): Show |
COL21A1 | ENSG00000124749.18 | transcript | ENST00000244728.10 | protein_coding | 29/29 | chr6 | TogoVar | ||||||
COL21A1_chr6_56051590_56252580 | 56069115 | T | C | splice_region_variant others(1): Show |
LOW | NA19005.hp1 | a0001 | a0001c0022 | a0001c0022t0003 | a0001c0022t0003g0063 | 1 | 264 | 0.0038 | 0 | c.202 others(4): Show |
p.Gly others(6): Show |
COL21A1 | ENSG00000124749.18 | transcript | ENST00000244728.10 | protein_coding | 22/30 | 2254/4173 | 2022/2874 | 674/957 | chr6 | TogoVar | ||
COL21A1_chr6_56051590_56252580 | 56168296 | G | A | missense_variant others(1): Show |
MODERATE | HG00099.hp1 HG00735.hp2 HG01192.hp1 others(10): Show |
a0003 | a0003c0005a0003c0006 | a0003c0005t0001a0003c0005t0007a0003c0005t0014others(1): Show | a0003c0005t0001g0157a0003c0005t0007g0119a0003c0005t0007g0122others(10): Show | 13 | 264 | 0.0492 | 0 | c.102 others(4): Show |
p.Thr others(6): Show |
COL21A1 | ENSG00000124749.18 | transcript | ENST00000244728.10 | protein_coding | 6/30 | 1260/4173 | 1028/2874 | 343/957 | chr6 | TogoVar | ||
COL22A1_chr8_138583235_138919041 | 138598712 | T | C | splice_region_variant others(1): Show |
LOW | HG02895.hp1 | a0002 | a0002c0023 | a0002c0023t0001 | a0002c0023t0001g0036 | 1 | 158 | 0.0063 | 0 | c.436 others(6): Show |
COL22A1 | ENSG00000169436.18 | transcript | ENST00000303045.11 | protein_coding | 61/64 | chr8 | TogoVar | ||||||
COL22A1_chr8_138583235_138919041 | 138623732 | C | T | splice_region_variant others(1): Show |
LOW | HG01070.hp2 | a0004 | a0004c0032 | a0004c0032t0001 | a0004c0032t0001g0115 | 1 | 158 | 0.0063 | 0 | c.377 others(4): Show |
p.Pro others(7): Show |
COL22A1 | ENSG00000169436.18 | transcript | ENST00000303045.11 | protein_coding | 52/65 | 4266/6394 | 3771/4881 | 1257/1626 | chr8 | TogoVar | ||
COL22A1_chr8_138583235_138919041 | 138660428 | T | C | splice_region_variant others(1): Show |
LOW | HG00280.hp2 HG00597.hp2 HG00639.hp2 others(47): Show |
a0001a0002a0003others(3): Show | a0001c0001a0001c0002a0001c0006others(19): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(27): Show | a0001c0001t0001g0050a0001c0001t0001g0053a0001c0001t0001g0082others(47): Show | 50 | 158 | 0.3165 | 0 | c.328 others(6): Show |
COL22A1 | ENSG00000169436.18 | transcript | ENST00000303045.11 | protein_coding | 44/64 | chr8 | TogoVar | ||||||
COL22A1_chr8_138583235_138919041 | 138679683 | G | A | splice_region_variant others(1): Show |
LOW | HG01099.hp1 HG01255.hp1 HG02523.hp2 others(4): Show |
a0001a0002 | a0001c0015a0002c0004a0002c0007others(3): Show | a0001c0015t0001a0002c0004t0001a0002c0004t0006others(4): Show | a0001c0015t0001g0068a0002c0004t0001g0044a0002c0004t0006g0131others(4): Show | 7 | 158 | 0.0443 | 0 | c.301 others(6): Show |
COL22A1 | ENSG00000169436.18 | transcript | ENST00000303045.11 | protein_coding | 39/64 | chr8 | TogoVar | ||||||
COL22A1_chr8_138583235_138919041 | 138700112 | G | A | splice_region_variant others(1): Show |
LOW | HG00735.hp1 HG02630.hp1 HG02886.hp1 others(4): Show |
a0001 | a0001c0024a0001c0027a0001c0046others(2): Show | a0001c0024t0004a0001c0024t0016a0001c0027t0001others(4): Show | a0001c0024t0004g0136a0001c0024t0016g0158a0001c0027t0001g0024others(4): Show | 7 | 158 | 0.0443 | 0 | c.259 others(4): Show |
p.Pro others(6): Show |
COL22A1 | ENSG00000169436.18 | transcript | ENST00000303045.11 | protein_coding | 32/65 | 3087/6394 | 2592/4881 | 864/1626 | chr8 | TogoVar | ||
COL22A1_chr8_138583235_138919041 | 138715738 | A | G | splice_region_variant others(1): Show |
LOW | HG00741.hp1 HG01361.hp1 HG01884.hp1 others(26): Show |
a0001a0002a0003others(4): Show | a0001c0001a0001c0002a0001c0006others(19): Show | a0001c0001t0001a0001c0002t0002a0001c0002t0007others(24): Show | a0001c0001t0001g0083a0001c0002t0002g0029a0001c0002t0007g0156others(26): Show | 29 | 158 | 0.1835 | 0 | c.246 others(6): Show |
COL22A1 | ENSG00000169436.18 | transcript | ENST00000303045.11 | protein_coding | 29/64 | chr8 | TogoVar | ||||||
COL22A1_chr8_138583235_138919041 | 138760237 | G | A | splice_region_variant others(1): Show |
LOW | HG02451.hp1 HG02486.hp2 HG02630.hp2 others(7): Show |
a0001a0002a0003others(2): Show | a0001c0012a0001c0014a0001c0017others(7): Show | a0001c0012t0010a0001c0014t0004a0001c0017t0005others(7): Show | a0001c0012t0010g0012a0001c0014t0004g0018a0001c0017t0005g0149others(7): Show | 10 | 158 | 0.0633 | 0 | c.190 others(6): Show |
COL22A1 | ENSG00000169436.18 | transcript | ENST00000303045.11 | protein_coding | 18/64 | chr8 | TogoVar | ||||||
COL22A1_chr8_138583235_138919041 | 138802874 | C | T | missense_variant others(1): Show |
MODERATE | HG02615.hp2 | a0015 | a0015c0039 | a0015c0039t0001 | a0015c0039t0001g0134 | 1 | 158 | 0.0063 | 0 | c.155 others(4): Show |
p.Val others(6): Show |
COL22A1 | ENSG00000169436.18 | transcript | ENST00000303045.11 | protein_coding | 11/65 | 2050/6394 | 1555/4881 | 519/1626 | chr8 | TogoVar | ||
COL22A1_chr8_138583235_138919041 | 138821136 | G | A | splice_region_variant others(1): Show |
LOW | HG01891.hp1 NA20752.hp2 |
a0001 | a0001c0028 | a0001c0028t0001a0001c0028t0003 | a0001c0028t0001g0034a0001c0028t0003g0008 | 2 | 158 | 0.0127 | 0 | c.124 others(4): Show |
p.Asp others(6): Show |
COL22A1 | ENSG00000169436.18 | transcript | ENST00000303045.11 | protein_coding | 7/65 | 1740/6394 | 1245/4881 | 415/1626 | chr8 | TogoVar | ||
COL23A1_chr5_178232618_178595393 | 178246247 | C | A | splice_region_variant others(1): Show |
LOW | HG02145.hp2 | a0003 | a0003c0023 | a0003c0023t0010 | a0003c0023t0010g0236 | 1 | 236 | 0.0042 | 0 | c.141 others(6): Show |
COL23A1 | ENSG00000050767.18 | transcript | ENST00000390654.8 | protein_coding | 24/28 | chr5 | TogoVar | ||||||
COL23A1_chr5_178232618_178595393 | 178254945 | C | CT | splice_region_variant others(1): Show |
LOW | HG00558.hp1 HG00639.hp1 HG01071.hp1 others(42): Show |
a0001a0002a0003others(6): Show | a0001c0001a0002c0002a0002c0003others(9): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0004others(17): Show | a0001c0001t0002g0028a0001c0001t0002g0165a0001c0001t0003g0166others(42): Show | 45 | 236 | 0.1907 | 1 | c.960 others(6): Show |
COL23A1 | ENSG00000050767.18 | transcript | ENST00000390654.8 | protein_coding | 16/28 | chr5 | TogoVar | ||||||
COL23A1_chr5_178232618_178595393 | 178263111 | TGCACTAG others(1361): Show |
T | exon_loss_variant others(4): Show |
HIGH | HG00639.hp1 | a0013 | a0013c0010 | a0013c0010t0002 | a0013c0010t0002g0117 | 1 | 236 | 0.0042 | -1368 | c.523 others(15): Show |
COL23A1 | ENSG00000050767.18 | transcript | ENST00000390654.8 | protein_coding | 9/29 | chr5 | TogoVar | ||||||
COL23A1_chr5_178232618_178595393 | 178288324 | C | T | splice_region_variant others(1): Show |
LOW | NA18906.hp2 | a0002 | a0002c0014 | a0002c0014t0003 | a0002c0014t0003g0124 | 1 | 236 | 0.0042 | 0 | c.441 others(3): Show |
p.Pro others(6): Show |
COL23A1 | ENSG00000050767.18 | transcript | ENST00000390654.8 | protein_coding | 5/29 | 637/2899 | 441/1623 | 147/540 | chr5 | TogoVar | ||
COL23A1_chr5_178232618_178595393 | 178290367 | G | T | missense_variant others(1): Show |
MODERATE | HG00639.hp1 | a0013 | a0013c0010 | a0013c0010t0002 | a0013c0010t0002g0117 | 1 | 236 | 0.0042 | 0 | c.409 others(3): Show |
p.Pro others(6): Show |
COL23A1 | ENSG00000050767.18 | transcript | ENST00000390654.8 | protein_coding | 4/29 | 605/2899 | 409/1623 | 137/540 | chr5 | TogoVar | ||
COL24A1_chr1_85724233_86161772 | 85775716 | G | GA | splice_region_variant others(1): Show |
LOW | HG01109.hp2 HG01884.hp1 HG02257.hp2 others(6): Show |
a0001a0004a0006others(3): Show | a0001c0001a0004c0002a0006c0062others(3): Show | a0001c0001t0002a0004c0002t0004a0006c0062t0001others(3): Show | a0001c0001t0002g0092a0001c0001t0002g0125a0001c0001t0002g0126others(6): Show | 9 | 238 | 0.0378 | 1 | c.433 others(7): Show |
COL24A1 | ENSG00000171502.15 | transcript | ENST00000370571.7 | protein_coding | 52/59 | chr1 | TogoVar | ||||||
COL24A1_chr1_85724233_86161772 | 85823530 | A | G | splice_region_variant others(1): Show |
LOW | NA18990.hp1 NA19010.hp2 |
a0005a0010 | a0005c0004a0010c0009 | a0005c0004t0001a0010c0009t0001 | a0005c0004t0001g0121a0010c0009t0001g0036 | 2 | 238 | 0.0084 | 0 | c.378 others(6): Show |
COL24A1 | ENSG00000171502.15 | transcript | ENST00000370571.7 | protein_coding | 45/59 | chr1 | TogoVar | ||||||
COL24A1_chr1_85724233_86161772 | 85823587 | G | A | splice_region_variant others(1): Show |
LOW | HG02809.hp1 | a0006 | a0006c0063 | a0006c0063t0002 | a0006c0063t0002g0233 | 1 | 238 | 0.0042 | 0 | c.373 others(4): Show |
p.Gly others(7): Show |
COL24A1 | ENSG00000171502.15 | transcript | ENST00000370571.7 | protein_coding | 45/60 | 4114/6834 | 3738/5145 | 1246/1714 | chr1 | TogoVar | ||
COL24A1_chr1_85724233_86161772 | 85849412 | A | G | splice_region_variant others(1): Show |
LOW | HG03239.hp2 | a0006 | a0006c0047 | a0006c0047t0005 | a0006c0047t0005g0010 | 1 | 238 | 0.0042 | 0 | c.330 others(6): Show |
COL24A1 | ENSG00000171502.15 | transcript | ENST00000370571.7 | protein_coding | 37/59 | chr1 | TogoVar | ||||||
COL24A1_chr1_85724233_86161772 | 85868633 | T | C | splice_region_variant others(1): Show |
LOW | HG00323.hp2 HG00423.hp1 HG00423.hp2 others(99): Show |
a0001a0002a0003others(24): Show | a0001c0001a0001c0005a0002c0003others(32): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(51): Show | a0001c0001t0001g0159a0001c0001t0001g0193a0001c0001t0002g0092others(99): Show | 102 | 238 | 0.4286 | 0 | c.319 others(6): Show |
COL24A1 | ENSG00000171502.15 | transcript | ENST00000370571.7 | protein_coding | 36/59 | chr1 | TogoVar | ||||||
COL24A1_chr1_85724233_86161772 | 86022298 | G | A | splice_region_variant others(1): Show |
LOW | HG00423.hp2 HG00639.hp1 HG00642.hp1 others(192): Show |
a0001a0002a0003others(43): Show | a0001c0001a0001c0005a0001c0066others(68): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0010others(101): Show | a0001c0001t0001g0099a0001c0001t0001g0100a0001c0001t0001g0114others(192): Show | 195 | 238 | 0.8193 | 0 | c.220 others(6): Show |
COL24A1 | ENSG00000171502.15 | transcript | ENST00000370571.7 | protein_coding | 17/59 | chr1 | TogoVar | ||||||
COL24A1_chr1_85724233_86161772 | 86050125 | C | T | missense_variant others(1): Show |
MODERATE | HG02145.hp1 | a0042 | a0042c0065 | a0042c0065t0004 | a0042c0065t0004g0188 | 1 | 238 | 0.0042 | 0 | c.190 others(4): Show |
p.Arg others(6): Show |
COL24A1 | ENSG00000171502.15 | transcript | ENST00000370571.7 | protein_coding | 11/60 | 2280/6834 | 1904/5145 | 635/1714 | chr1 | TogoVar | ||
COL24A1_chr1_85724233_86161772 | 86063707 | G | A | splice_region_variant others(1): Show |
LOW | HG00741.hp1 HG01099.hp2 HG01106.hp2 others(14): Show |
a0001a0002a0004others(5): Show | a0001c0001a0002c0003a0004c0002others(5): Show | a0001c0001t0001a0002c0003t0001a0002c0003t0002others(8): Show | a0001c0001t0001g0119a0002c0003t0001g0166a0002c0003t0001g0167others(14): Show | 17 | 238 | 0.0714 | 0 | c.175 others(6): Show |
COL24A1 | ENSG00000171502.15 | transcript | ENST00000370571.7 | protein_coding | 8/59 | chr1 | TogoVar | ||||||
COL24A1_chr1_85724233_86161772 | 86156341 | G | A | missense_variant others(1): Show |
MODERATE | NA19010.hp1 | a0030 | a0030c0078 | a0030c0078t0002 | a0030c0078t0002g0237 | 1 | 238 | 0.0042 | 0 | c.56C others(2): Show |
p.Thr others(5): Show |
COL24A1 | ENSG00000171502.15 | transcript | ENST00000370571.7 | protein_coding | 1/60 | 432/6834 | 56/5145 | 19/1714 | chr1 | TogoVar | ||
COL25A1_chr4_108803725_109307658 | 108974557 | G | T | splice_region_variant others(1): Show |
LOW | HG00639.hp2 | a0001 | a0001c0006 | a0001c0006t0015 | a0001c0006t0015g0022 | 1 | 130 | 0.0077 | 0 | c.441 others(3): Show |
p.Gly others(6): Show |
COL25A1 | ENSG00000188517.17 | transcript | ENST00000399132.6 | protein_coding | 7/38 | 987/7713 | 441/1965 | 147/654 | chr4 | TogoVar | ||
COL25A1_chr4_108803725_109307658 | 108974562 | GA | G | splice_region_variant others(1): Show |
LOW | HG00639.hp1 HG00639.hp2 HG00741.hp1 others(44): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0004others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(18): Show | a0001c0001t0001g0048a0001c0001t0001g0068a0001c0001t0001g0074others(44): Show | 47 | 130 | 0.3615 | -1 | c.439 others(6): Show |
COL25A1 | ENSG00000188517.17 | transcript | ENST00000399132.6 | protein_coding | 6/37 | chr4 | TogoVar | ||||||
COL25A1_chr4_108803725_109307658 | 109048181 | G | T | splice_region_variant others(1): Show |
LOW | HG00140.hp1 HG00140.hp2 HG00558.hp1 others(80): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(5): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(30): Show | a0001c0001t0001g0037a0001c0001t0001g0041a0001c0001t0001g0048others(80): Show | 83 | 130 | 0.6385 | 0 | c.413 others(5): Show |
COL25A1 | ENSG00000188517.17 | transcript | ENST00000399132.6 | protein_coding | 4/37 | chr4 | TogoVar | ||||||
COL25A1_chr4_108803725_109307658 | 109302164 | C | T | splice_region_variant others(1): Show |
LOW | HG00140.hp2 HG00323.hp2 HG00558.hp2 others(87): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(26): Show | a0001c0001t0001g0037a0001c0001t0001g0041a0001c0001t0001g0048others(87): Show | 90 | 130 | 0.6923 | 0 | c.-57 others(5): Show |
COL25A1 | ENSG00000188517.17 | transcript | ENST00000399132.6 | protein_coding | 1/37 | chr4 | TogoVar | ||||||
COL26A1_chr7_101357875_101564024 | 101540049 | G | A | missense_variant others(1): Show |
MODERATE | HG01257.hp1 HG01258.hp1 |
a0004 | a0004c0011 | a0004c0011t0003 | a0004c0011t0003g0012a0004c0011t0003g0038 | 2 | 174 | 0.0115 | 0 | c.604 others(3): Show |
p.Gly others(6): Show |
COL26A1 | ENSG00000160963.14 | transcript | ENST00000313669.12 | protein_coding | 5/13 | 762/2978 | 604/1326 | 202/441 | chr7 | TogoVar | ||
COL26A1_chr7_101357875_101564024 | 101551143 | C | T | splice_region_variant others(1): Show |
LOW | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(56): Show |
a0001a0002a0003others(1): Show | a0001c0005a0001c0008a0001c0009others(8): Show | a0001c0005t0002a0001c0005t0005a0001c0005t0008others(20): Show | a0001c0005t0002g0118a0001c0005t0002g0149a0001c0005t0002g0155others(56): Show | 59 | 174 | 0.3391 | 0 | c.102 others(4): Show |
p.Ser others(6): Show |
COL26A1 | ENSG00000160963.14 | transcript | ENST00000313669.12 | protein_coding | 10/13 | 1187/2978 | 1029/1326 | 343/441 | chr7 | TogoVar | ||
COL27A1_chr9_114150537_114317511 | 114206303 | G | A | splice_region_variant others(1): Show |
LOW | NA19084.hp1 | a0004 | a0004c0075 | a0004c0075t0009 | a0004c0075t0009g0217 | 1 | 308 | 0.0033 | 0 | c.226 others(6): Show |
COL27A1 | ENSG00000196739.15 | transcript | ENST00000356083.8 | protein_coding | 10/60 | chr9 | TogoVar | ||||||
COL27A1_chr9_114150537_114317511 | 114252875 | G | A | splice_region_variant others(1): Show |
LOW | HG02572.hp1 | a0029 | a0029c0058 | a0029c0058t0006 | a0029c0058t0006g0039 | 1 | 308 | 0.0033 | 0 | c.308 others(6): Show |
COL27A1 | ENSG00000196739.15 | transcript | ENST00000356083.8 | protein_coding | 26/60 | chr9 | TogoVar | ||||||
COL27A1_chr9_114150537_114317511 | 114258602 | G | A | splice_region_variant others(1): Show |
LOW | HG02615.hp2 HG02630.hp2 HG03209.hp1 |
a0009a0028 | a0009c0042a0028c0065 | a0009c0042t0006a0009c0042t0008a0028c0065t0006 | a0009c0042t0006g0199a0009c0042t0008g0093a0028c0065t0006g0012 | 3 | 308 | 0.0097 | 0 | c.319 others(6): Show |
COL27A1 | ENSG00000196739.15 | transcript | ENST00000356083.8 | protein_coding | 28/60 | chr9 | TogoVar | ||||||
COL27A1_chr9_114150537_114317511 | 114269292 | C | T | missense_variant others(1): Show |
MODERATE | NA19081.hp2 | a0040 | a0040c0150 | a0040c0150t0003 | a0040c0150t0003g0249 | 1 | 308 | 0.0033 | 0 | c.355 others(4): Show |
p.Arg others(7): Show |
COL27A1 | ENSG00000196739.15 | transcript | ENST00000356083.8 | protein_coding | 35/61 | 3967/7813 | 3553/5583 | 1185/1860 | chr9 | TogoVar | ||
COL27A1_chr9_114150537_114317511 | 114282563 | C | T | missense_variant others(1): Show |
MODERATE | HG02280.hp1 HG03453.hp2 |
a0034a0060 | a0034c0133a0060c0054 | a0034c0133t0001a0060c0054t0014 | a0034c0133t0001g0190a0060c0054t0014g0030 | 2 | 308 | 0.0065 | 0 | c.387 others(4): Show |
p.Thr others(7): Show |
COL27A1 | ENSG00000196739.15 | transcript | ENST00000356083.8 | protein_coding | 39/61 | 4292/7813 | 3878/5583 | 1293/1860 | chr9 | TogoVar | ||
COL27A1_chr9_114150537_114317511 | 114288510 | G | A | missense_variant others(1): Show |
MODERATE | HG01884.hp1 HG02257.hp1 HG02258.hp2 others(13): Show |
a0009a0031a0035others(5): Show | a0009c0039a0009c0042a0009c0043others(10): Show | a0009c0039t0006a0009c0039t0008a0009c0042t0006others(12): Show | a0009c0039t0006g0203a0009c0039t0008g0055a0009c0042t0006g0199others(13): Show | 16 | 308 | 0.0520 | 0 | c.404 others(4): Show |
p.Arg others(7): Show |
COL27A1 | ENSG00000196739.15 | transcript | ENST00000356083.8 | protein_coding | 42/61 | 4457/7813 | 4043/5583 | 1348/1860 | chr9 | TogoVar | ||
COL27A1_chr9_114150537_114317511 | 114301125 | G | A | splice_region_variant others(1): Show |
LOW | NA18945.hp1 | a0004 | a0004c0073 | a0004c0073t0004 | a0004c0073t0004g0003 | 1 | 308 | 0.0033 | 0 | c.475 others(4): Show |
p.Pro others(7): Show |
COL27A1 | ENSG00000196739.15 | transcript | ENST00000356083.8 | protein_coding | 52/61 | 5169/7813 | 4755/5583 | 1585/1860 | chr9 | TogoVar | ||
COL27A1_chr9_114150537_114317511 | 114302076 | T | C | splice_region_variant others(1): Show |
LOW | NA19030.hp2 | a0001 | a0001c0114 | a0001c0114t0006 | a0001c0114t0006g0077 | 1 | 308 | 0.0033 | 0 | c.484 others(6): Show |
COL27A1 | ENSG00000196739.15 | transcript | ENST00000356083.8 | protein_coding | 55/60 | chr9 | TogoVar | ||||||
COL28A1_chr7_7352875_7540873 | 7380698 | A | G | splice_region_variant others(1): Show |
LOW | HG02922.hp1 HG02976.hp1 HG03195.hp1 |
a0022a0026a0031 | a0022c0026a0026c0043a0031c0033 | a0022c0026t0007a0026c0043t0007a0031c0033t0003 | a0022c0026t0007g0164a0026c0043t0007g0029a0031c0033t0003g0031 | 3 | 196 | 0.0153 | 0 | c.228 others(6): Show |
COL28A1 | ENSG00000215018.10 | transcript | ENST00000399429.8 | protein_coding | 29/34 | chr7 | TogoVar | ||||||
COL28A1_chr7_7352875_7540873 | 7436396 | T | G | missense_variant others(1): Show |
MODERATE | HG02630.hp1 | a0032 | a0032c0034 | a0032c0034t0003 | a0032c0034t0003g0038 | 1 | 196 | 0.0051 | 0 | c.185 others(4): Show |
p.Lys others(6): Show |
COL28A1 | ENSG00000215018.10 | transcript | ENST00000399429.8 | protein_coding | 23/35 | 2020/4297 | 1859/3378 | 620/1125 | chr7 | TogoVar | ||
COL28A1_chr7_7352875_7540873 | 7436467 | T | C | splice_region_variant others(1): Show |
LOW | HG01243.hp1 HG02055.hp1 HG02145.hp2 others(11): Show |
a0002a0019a0027others(1): Show | a0002c0002a0002c0004a0002c0049others(3): Show | a0002c0002t0002a0002c0002t0006a0002c0004t0003others(4): Show | a0002c0002t0002g0015a0002c0002t0006g0002a0002c0004t0003g0026others(11): Show | 14 | 196 | 0.0714 | 0 | c.179 others(6): Show |
COL28A1 | ENSG00000215018.10 | transcript | ENST00000399429.8 | protein_coding | 22/34 | chr7 | TogoVar | ||||||
COL2A1_chr12_47967967_48009476 | 47983086 | T | C | splice_region_variant others(1): Show |
LOW | HG00741.hp1 HG02559.hp1 |
a0001 | a0001c0027a0001c0042 | a0001c0027t0001a0001c0042t0001 | a0001c0027t0001g0229a0001c0042t0001g0186 | 2 | 414 | 0.0048 | 0 | c.209 others(6): Show |
COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 32/53 | chr12 | TogoVar | ||||||
COL2A1_chr12_47967967_48009476 | 47984597 | A | G | splice_region_variant others(1): Show |
LOW | HG00741.hp1 | a0001 | a0001c0042 | a0001c0042t0001 | a0001c0042t0001g0186 | 1 | 414 | 0.0024 | 0 | c.183 others(4): Show |
p.Gly others(6): Show |
COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 28/54 | 1991/5059 | 1836/4464 | 612/1487 | chr12 | TogoVar |