regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
COL2A1_chr12_47967967_48009476 | 47987262 | C | T | splice_region_variant others(1): Show |
LOW | HG00323.hp1 HG03704.hp1 HG03942.hp1 others(1): Show |
a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0039a0001c0002t0001g0164a0001c0002t0001g0174 | 4 | 414 | 0.0097 | 0 | c.126 others(6): Show |
COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 20/53 | chr12 | TogoVar | ||||||
COL2A1_chr12_47967967_48009476 | 47989761 | C | T | splice_region_variant others(1): Show |
LOW | HG02630.hp1 | a0001 | a0001c0039 | a0001c0039t0001 | a0001c0039t0001g0197 | 1 | 414 | 0.0024 | 0 | c.106 others(4): Show |
p.Pro others(6): Show |
COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 17/54 | 1223/5059 | 1068/4464 | 356/1487 | chr12 | TogoVar | ||
COL2A1_chr12_47967967_48009476 | 47992938 | C | T | splice_region_variant others(1): Show |
LOW | NA18986.hp1 | a0002 | a0002c0001 | a0002c0001t0002 | a0002c0001t0002g0108 | 1 | 414 | 0.0024 | 0 | c.970 others(5): Show |
COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 15/53 | chr12 | TogoVar | ||||||
COL2A1_chr12_47967967_48009476 | 47995702 | G | A | splice_region_variant others(1): Show |
LOW | HG02622.hp2 HG02970.hp2 HG03041.hp1 |
a0001 | a0001c0008a0001c0051 | a0001c0008t0001a0001c0051t0001 | a0001c0008t0001g0204a0001c0008t0001g0222a0001c0051t0001g0205 | 3 | 414 | 0.0073 | 0 | c.708 others(5): Show |
COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 10/53 | chr12 | TogoVar | ||||||
COL2A1_chr12_47967967_48009476 | 47995926 | C | T | splice_region_variant others(1): Show |
LOW | HG00280.hp1 HG03516.hp2 HG03540.hp1 others(2): Show |
a0001a0002 | a0001c0003a0001c0027a0002c0001 | a0001c0003t0007a0001c0027t0001a0002c0001t0001 | a0001c0003t0007g0021a0001c0027t0001g0185a0002c0001t0001g0121 | 5 | 414 | 0.0121 | 0 | c.610 others(5): Show |
COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 8/53 | chr12 | TogoVar | ||||||
COL2A1_chr12_47967967_48009476 | 47998199 | T | C | splice_region_variant others(1): Show |
LOW | NA18987.hp1 NA19070.hp1 |
a0002 | a0002c0025 | a0002c0025t0002 | a0002c0025t0002g0031 | 2 | 414 | 0.0048 | 0 | c.312 others(3): Show |
p.Gly others(6): Show |
COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 4/54 | 467/5059 | 312/4464 | 104/1487 | chr12 | TogoVar | ||
COL3A1_chr2_188969373_189017746 | 188987143 | C | T | splice_region_variant others(1): Show |
LOW | HG02280.hp2 | a0001 | a0001c0003 | a0001c0003t0004 | a0001c0003t0004g0108 | 1 | 376 | 0.0027 | 0 | c.528 others(5): Show |
COL3A1 | ENSG00000168542.17 | transcript | ENST00000304636.9 | protein_coding | 5/50 | chr2 | TogoVar | ||||||
COL3A1_chr2_188969373_189017746 | 188988582 | C | T | splice_region_variant others(1): Show |
LOW | HG02145.hp2 HG03516.hp2 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0010 | a0001c0001t0001g0112a0001c0001t0010g0111 | 2 | 376 | 0.0053 | 0 | c.583 others(5): Show |
COL3A1 | ENSG00000168542.17 | transcript | ENST00000304636.9 | protein_coding | 6/50 | chr2 | TogoVar | ||||||
COL3A1_chr2_188969373_189017746 | 188991664 | T | C | splice_region_variant others(1): Show |
LOW | HG02027.hp2 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0251 | 1 | 376 | 0.0027 | 0 | c.898 others(5): Show |
COL3A1 | ENSG00000168542.17 | transcript | ENST00000304636.9 | protein_coding | 12/50 | chr2 | TogoVar | ||||||
COL3A1_chr2_188969373_189017746 | 188994708 | CT | C | splice_region_variant others(1): Show |
LOW | HG00741.hp1 HG01074.hp1 HG01109.hp2 others(34): Show |
a0001a0002a0003 | a0001c0001a0001c0004a0002c0002others(1): Show | a0001c0001t0001a0001c0004t0001a0001c0004t0002others(2): Show | a0001c0001t0001g0224a0001c0004t0001g0014a0001c0004t0001g0076others(29): Show | 37 | 376 | 0.0984 | -1 | c.134 others(7): Show |
COL3A1 | ENSG00000168542.17 | transcript | ENST00000304636.9 | protein_coding | 19/50 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
COL3A1_chr2_188969373_189017746 | 188997223 | G | A | splice_region_variant others(1): Show |
LOW | HG00438.hp2 NA19057.hp2 NA19077.hp1 |
a0001a0006 | a0001c0001a0006c0010 | a0001c0001t0001a0006c0010t0001 | a0001c0001t0001g0315a0006c0010t0001g0314a0006c0010t0001g0316 | 3 | 376 | 0.0080 | 0 | c.181 others(6): Show |
COL3A1 | ENSG00000168542.17 | transcript | ENST00000304636.9 | protein_coding | 25/50 | chr2 | TogoVar | ||||||
COL3A1_chr2_188969373_189017746 | 189010893 | A | G | splice_region_variant others(1): Show |
LOW | HG01123.hp2 | a0001 | a0001c0004 | a0001c0004t0001 | a0001c0004t0001g0227 | 1 | 376 | 0.0027 | 0 | c.425 others(6): Show |
COL3A1 | ENSG00000168542.17 | transcript | ENST00000304636.9 | protein_coding | 50/50 | chr2 | TogoVar | ||||||
COL4A1_chr13_110143963_110312157 | 110161185 | G | A | splice_region_variant others(1): Show |
LOW | HG00438.hp1 HG00544.hp2 HG00558.hp1 others(79): Show |
a0001a0002a0003others(3): Show | a0001c0001a0001c0003a0001c0006others(24): Show | a0001c0001t0001a0001c0001t0005a0001c0003t0001others(31): Show | a0001c0001t0001g0001a0001c0001t0001g0026a0001c0001t0001g0032others(78): Show | 82 | 344 | 0.2384 | 0 | c.464 others(6): Show |
COL4A1 | ENSG00000187498.16 | transcript | ENST00000375820.10 | protein_coding | 49/51 | chr13 | TogoVar | ||||||
COL4A1_chr13_110143963_110312157 | 110167238 | C | T | splice_region_variant others(1): Show |
LOW | HG02723.hp1 | a0002 | a0002c0011 | a0002c0011t0001 | a0002c0011t0001g0216 | 1 | 344 | 0.0029 | 0 | c.387 others(6): Show |
COL4A1 | ENSG00000187498.16 | transcript | ENST00000375820.10 | protein_coding | 43/51 | chr13 | TogoVar | ||||||
COL4A1_chr13_110143963_110312157 | 110201433 | G | C | splice_region_variant others(1): Show |
LOW | HG01081.hp1 HG02723.hp2 HG02970.hp1 others(6): Show |
a0001a0002a0003others(2): Show | a0001c0006a0001c0065a0002c0015others(4): Show | a0001c0006t0001a0001c0065t0001a0002c0015t0001others(4): Show | a0001c0006t0001g0008a0001c0065t0001g0023a0002c0015t0001g0199others(6): Show | 9 | 344 | 0.0262 | 0 | c.108 others(6): Show |
COL4A1 | ENSG00000187498.16 | transcript | ENST00000375820.10 | protein_coding | 19/51 | chr13 | TogoVar | ||||||
COL4A1_chr13_110143963_110312157 | 110206722 | G | C | splice_region_variant others(1): Show |
LOW | HG00280.hp1 HG00280.hp2 HG00323.hp2 others(117): Show |
a0001a0002a0003others(4): Show | a0001c0003a0001c0006a0001c0007others(55): Show | a0001c0003t0001a0001c0006t0001a0001c0006t0003others(71): Show | a0001c0003t0001g0094a0001c0003t0001g0095a0001c0003t0001g0118others(116): Show | 120 | 344 | 0.3488 | 0 | c.808 others(5): Show |
COL4A1 | ENSG00000187498.16 | transcript | ENST00000375820.10 | protein_coding | 14/51 | chr13 | TogoVar | ||||||
COL4A1_chr13_110143963_110312157 | 110206722 | G | T | splice_region_variant others(1): Show |
LOW | HG01891.hp1 HG02451.hp1 HG02615.hp1 others(1): Show |
a0001a0002 | a0001c0037a0002c0004a0002c0031 | a0001c0037t0001a0002c0004t0001a0002c0031t0001 | a0001c0037t0001g0134a0002c0004t0001g0226a0002c0031t0001g0194others(1): Show | 4 | 344 | 0.0116 | 0 | c.808 others(5): Show |
COL4A1 | ENSG00000187498.16 | transcript | ENST00000375820.10 | protein_coding | 14/51 | chr13 | TogoVar | ||||||
COL4A1_chr13_110143963_110312157 | 110207396 | C | T | splice_region_variant others(1): Show |
LOW | HG00140.hp1 HG00140.hp2 HG00323.hp1 others(205): Show |
a0001a0002a0003others(5): Show | a0001c0001a0001c0003a0001c0007others(59): Show | a0001c0001t0001a0001c0001t0005a0001c0003t0001others(71): Show | a0001c0001t0001g0001a0001c0001t0001g0011a0001c0001t0001g0013others(204): Show | 208 | 344 | 0.6047 | 0 | c.780 others(5): Show |
COL4A1 | ENSG00000187498.16 | transcript | ENST00000375820.10 | protein_coding | 13/51 | chr13 | TogoVar | ||||||
COL4A1_chr13_110143963_110312157 | 110213918 | G | A | splice_region_variant others(1): Show |
LOW | HG00140.hp2 HG00408.hp1 HG00639.hp1 others(49): Show |
a0001a0002a0003others(1): Show | a0001c0003a0001c0007a0001c0013others(17): Show | a0001c0003t0001a0001c0007t0001a0001c0013t0001others(19): Show | a0001c0003t0001g0014a0001c0003t0001g0054a0001c0003t0001g0059others(49): Show | 52 | 344 | 0.1512 | 0 | c.234 others(5): Show |
COL4A1 | ENSG00000187498.16 | transcript | ENST00000375820.10 | protein_coding | 3/51 | chr13 | TogoVar | ||||||
COL4A2_chr13_110302284_110518209 | 110438619 | G | C | missense_variant others(1): Show |
MODERATE | NA18991.hp2 | a0016 | a0016c0048 | a0016c0048t0005 | a0016c0048t0005g0206 | 1 | 372 | 0.0027 | 0 | c.863 others(3): Show |
p.Gly others(6): Show |
COL4A2 | ENSG00000134871.19 | transcript | ENST00000360467.7 | protein_coding | 15/48 | 1152/6446 | 863/5139 | 288/1712 | chr13 | TogoVar | ||
COL4A2_chr13_110302284_110518209 | 110446790 | T | G | splice_region_variant others(1): Show |
LOW | HG02027.hp1 | a0001 | a0001c0001 | a0001c0001t0046 | a0001c0001t0046g0283 | 1 | 372 | 0.0027 | 0 | c.101 others(6): Show |
COL4A2 | ENSG00000134871.19 | transcript | ENST00000360467.7 | protein_coding | 17/47 | chr13 | TogoVar | ||||||
COL4A2_chr13_110302284_110518209 | 110458942 | G | C | splice_region_variant others(1): Show |
LOW | NA18957.hp2 NA19065.hp2 |
a0001 | a0001c0002a0001c0005 | a0001c0002t0001a0001c0005t0002 | a0001c0002t0001g0243a0001c0005t0002g0342 | 2 | 372 | 0.0054 | 0 | c.159 others(6): Show |
COL4A2 | ENSG00000134871.19 | transcript | ENST00000360467.7 | protein_coding | 22/47 | chr13 | TogoVar | ||||||
COL4A2_chr13_110302284_110518209 | 110462191 | G | C | splice_region_variant others(1): Show |
LOW | HG02922.hp2 HG02965.hp2 HG03453.hp2 |
a0002 | a0002c0054a0002c0055a0002c0056 | a0002c0054t0045a0002c0055t0016a0002c0056t0004 | a0002c0054t0045g0233a0002c0055t0016g0250a0002c0056t0004g0266 | 3 | 372 | 0.0081 | 0 | c.166 others(6): Show |
COL4A2 | ENSG00000134871.19 | transcript | ENST00000360467.7 | protein_coding | 23/47 | chr13 | TogoVar | ||||||
COL4A2_chr13_110302284_110518209 | 110465398 | C | T | splice_region_variant others(1): Show |
LOW | HG00099.hp2 HG00140.hp1 HG00140.hp2 others(153): Show |
a0001a0002a0003others(13): Show | a0001c0001a0001c0008a0001c0014others(72): Show | a0001c0001t0005a0001c0001t0006a0001c0008t0001others(115): Show | a0001c0001t0005g0107a0001c0001t0005g0154a0001c0001t0006g0047others(152): Show | 156 | 372 | 0.4194 | 0 | c.177 others(6): Show |
COL4A2 | ENSG00000134871.19 | transcript | ENST00000360467.7 | protein_coding | 24/47 | chr13 | TogoVar | ||||||
COL4A2_chr13_110302284_110518209 | 110478172 | C | T | splice_region_variant others(1): Show |
LOW | HG00099.hp2 HG00140.hp1 HG00140.hp2 others(164): Show |
a0001a0002a0003others(9): Show | a0001c0001a0001c0002a0001c0003others(61): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(110): Show | a0001c0001t0001g0001a0001c0001t0001g0155a0001c0001t0001g0189others(163): Show | 167 | 372 | 0.4489 | 0 | c.258 others(6): Show |
COL4A2 | ENSG00000134871.19 | transcript | ENST00000360467.7 | protein_coding | 30/47 | chr13 | TogoVar | ||||||
COL4A2_chr13_110302284_110518209 | 110482511 | T | C | splice_region_variant others(1): Show |
LOW | HG00323.hp2 HG00423.hp2 HG00544.hp2 others(65): Show |
a0001a0002a0003others(6): Show | a0001c0001a0001c0002a0001c0003others(34): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0006others(54): Show | a0001c0001t0001g0155a0001c0001t0001g0363a0001c0001t0003g0063others(65): Show | 68 | 372 | 0.1828 | 0 | c.275 others(6): Show |
COL4A2 | ENSG00000134871.19 | transcript | ENST00000360467.7 | protein_coding | 31/47 | chr13 | TogoVar | ||||||
COL4A2_chr13_110302284_110518209 | 110492065 | C | G | splice_region_variant others(1): Show |
LOW | HG00423.hp2 HG00642.hp2 HG01346.hp2 others(45): Show |
a0001a0002a0003others(5): Show | a0001c0001a0001c0002a0001c0003others(21): Show | a0001c0001t0004a0001c0001t0005a0001c0001t0023others(33): Show | a0001c0001t0004g0348a0001c0001t0005g0154a0001c0001t0023g0329others(45): Show | 48 | 372 | 0.1290 | 0 | c.345 others(6): Show |
COL4A2 | ENSG00000134871.19 | transcript | ENST00000360467.7 | protein_coding | 37/47 | chr13 | TogoVar | ||||||
COL4A2_chr13_110302284_110518209 | 110493115 | GAAATAAC others(27): Show |
G | frameshift_variant others(3): Show |
HIGH | HG03516.hp1 | a0001 | a0001c0008 | a0001c0008t0001 | a0001c0008t0001g0202 | 1 | 372 | 0.0027 | -34 | c.356 others(46): Show |
p.Gly others(6): Show |
COL4A2 | ENSG00000134871.19 | transcript | ENST00000360467.7 | protein_coding | 39/48 | 3563/5139 | 1188/1712 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | ||
COL4A2_chr13_110302284_110518209 | 110493286 | C | T | splice_region_variant others(1): Show |
LOW | HG00423.hp2 HG00642.hp2 HG01346.hp2 others(49): Show |
a0001a0002a0003others(5): Show | a0001c0001a0001c0002a0001c0003others(25): Show | a0001c0001t0004a0001c0001t0005a0001c0001t0023others(37): Show | a0001c0001t0004g0348a0001c0001t0005g0154a0001c0001t0023g0329others(49): Show | 52 | 372 | 0.1398 | 0 | c.363 others(6): Show |
COL4A2 | ENSG00000134871.19 | transcript | ENST00000360467.7 | protein_coding | 39/47 | chr13 | TogoVar | ||||||
COL4A2_chr13_110302284_110518209 | 110504262 | A | C | missense_variant others(1): Show |
MODERATE | HG03195.hp1 | a0019 | a0019c0072 | a0019c0072t0048 | a0019c0072t0048g0223 | 1 | 372 | 0.0027 | 0 | c.440 others(4): Show |
p.Glu others(7): Show |
COL4A2 | ENSG00000134871.19 | transcript | ENST00000360467.7 | protein_coding | 45/48 | 4689/6446 | 4400/5139 | 1467/1712 | chr13 | TogoVar | ||
COL4A2_chr13_110302284_110518209 | 110506330 | TAGGTGCA others(34): Show |
T | frameshift_variant others(3): Show |
HIGH | HG03490.hp1 HG03492.hp1 |
a0003 | a0003c0010 | a0003c0010t0004 | a0003c0010t0004g0002 | 2 | 372 | 0.0054 | -41 | c.440 others(53): Show |
p.Ala others(6): Show |
COL4A2 | ENSG00000134871.19 | transcript | ENST00000360467.7 | protein_coding | 46/48 | 4403/5139 | 1468/1712 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | ||
COL4A2_chr13_110302284_110518209 | 110511927 | T | C | splice_region_variant others(1): Show |
LOW | HG02717.hp1 HG02976.hp1 HG03130.hp2 |
a0001 | a0001c0001 | a0001c0001t0010a0001c0001t0042 | a0001c0001t0010g0033a0001c0001t0010g0035a0001c0001t0042g0022 | 3 | 372 | 0.0081 | 0 | c.488 others(6): Show |
COL4A2 | ENSG00000134871.19 | transcript | ENST00000360467.7 | protein_coding | 47/47 | chr13 | TogoVar | ||||||
COL4A3_chr2_227159624_227319792 | 227237964 | C | T | splice_region_variant others(1): Show |
LOW | HG01167.hp1 HG01169.hp2 HG01361.hp2 others(8): Show |
a0001a0004a0021 | a0001c0001a0004c0003a0021c0053 | a0001c0001t0001a0001c0001t0002a0004c0003t0004others(1): Show | a0001c0001t0001g0205a0001c0001t0002g0130a0001c0001t0002g0291others(8): Show | 11 | 344 | 0.0320 | 0 | c.88- others(4): Show |
COL4A3 | ENSG00000169031.21 | transcript | ENST00000396578.8 | protein_coding | 1/51 | chr2 | TogoVar | ||||||
COL4A3_chr2_227159624_227319792 | 227294944 | GT | G | splice_region_variant others(1): Show |
LOW | HG00099.hp2 HG00280.hp1 HG00280.hp2 others(215): Show |
a0001a0002a0003others(27): Show | a0001c0001a0001c0042a0001c0047others(43): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(60): Show | a0001c0001t0001g0015a0001c0001t0001g0018a0001c0001t0001g0020others(215): Show | 218 | 344 | 0.6337 | -1 | c.341 others(7): Show |
COL4A3 | ENSG00000169031.21 | transcript | ENST00000396578.8 | protein_coding | 39/51 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
COL4A3_chr2_227159624_227319792 | 227294944 | GTT | G | splice_region_variant others(1): Show |
LOW | HG00099.hp1 HG00423.hp2 HG00609.hp2 others(69): Show |
a0001a0002a0003others(8): Show | a0001c0001a0002c0004a0002c0007others(12): Show | a0001c0001t0003a0002c0004t0003a0002c0004t0013others(16): Show | a0001c0001t0003g0274a0002c0004t0003g0091a0002c0004t0003g0124others(69): Show | 72 | 344 | 0.2093 | -2 | c.341 others(15): Show |
COL4A3 | ENSG00000169031.21 | transcript | ENST00000396578.8 | protein_coding | 39/51 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
COL4A3_chr2_227159624_227319792 | 227304151 | G | A | splice_region_variant others(1): Show |
LOW | NA18982.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0185 | 1 | 344 | 0.0029 | 0 | c.415 others(6): Show |
COL4A3 | ENSG00000169031.21 | transcript | ENST00000396578.8 | protein_coding | 46/51 | chr2 | TogoVar | ||||||
COL4A4_chr2_226997714_227169205 | 227008312 | A | G | splice_region_variant others(1): Show |
LOW | HG00099.hp1 HG00323.hp1 HG00323.hp2 others(147): Show |
a0001a0002a0003others(27): Show | a0001c0010a0002c0002a0002c0019others(41): Show | a0001c0010t0005a0002c0002t0002a0002c0002t0004others(56): Show | a0001c0010t0005g0272a0001c0010t0005g0275a0001c0010t0005g0276others(147): Show | 150 | 284 | 0.5282 | 0 | c.452 others(6): Show |
COL4A4 | ENSG00000081052.14 | transcript | ENST00000396625.5 | protein_coding | 46/47 | chr2 | TogoVar | ||||||
COL4A4_chr2_226997714_227169205 | 227012175 | C | A | splice_region_variant others(1): Show |
LOW | HG01943.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0068 | 1 | 284 | 0.0035 | 0 | c.433 others(6): Show |
COL4A4 | ENSG00000081052.14 | transcript | ENST00000396625.5 | protein_coding | 45/47 | chr2 | TogoVar | ||||||
COL4A4_chr2_226997714_227169205 | 227027903 | C | T | splice_region_variant others(1): Show |
LOW | HG00099.hp1 HG00323.hp1 HG00323.hp2 others(133): Show |
a0002a0004a0005others(18): Show | a0002c0002a0002c0019a0002c0021others(34): Show | a0002c0002t0002a0002c0002t0004a0002c0002t0005others(49): Show | a0002c0002t0002g0008a0002c0002t0002g0009a0002c0002t0002g0013others(133): Show | 136 | 284 | 0.4789 | 0 | c.408 others(4): Show |
p.Pro others(7): Show |
COL4A4 | ENSG00000081052.14 | transcript | ENST00000396625.5 | protein_coding | 42/48 | 4380/9984 | 4080/5073 | 1360/1690 | chr2 | TogoVar | ||
COL4A4_chr2_226997714_227169205 | 227057605 | A | G | splice_region_variant others(1): Show |
LOW | HG00140.hp1 HG00408.hp2 HG00609.hp1 others(41): Show |
a0003a0012a0014others(6): Show | a0003c0003a0003c0014a0003c0026others(11): Show | a0003c0003t0003a0003c0003t0030a0003c0003t0031others(14): Show | a0003c0003t0003g0004a0003c0003t0003g0005a0003c0003t0003g0006others(41): Show | 44 | 284 | 0.1549 | 0 | c.238 others(6): Show |
COL4A4 | ENSG00000081052.14 | transcript | ENST00000396625.5 | protein_coding | 28/47 | chr2 | TogoVar | ||||||
COL4A5_chrX_108434838_108702545 | 108677501 | T | A | splice_region_variant others(1): Show |
LOW | HG02630.hp1 | a0008 | a0008c0014 | a0008c0014t0001 | a0008c0014t0001g0252 | 1 | 269 | 0.0037 | 0 | c.381 others(4): Show |
p.Gly others(7): Show |
COL4A5 | ENSG00000188153.14 | transcript | ENST00000328300.11 | protein_coding | 44/53 | 4098/6531 | 3810/5076 | 1270/1691 | chrX | TogoVar | ||
COL4A6_chrX_108150614_108443422 | 108159454 | G | A | splice_region_variant others(1): Show |
LOW | HG01081.hp2 HG01884.hp2 HG01975.hp2 others(11): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0012a0002c0003others(3): Show | a0001c0001t0002a0001c0012t0002a0002c0003t0002others(4): Show | a0001c0001t0002g0012a0001c0001t0002g0071a0001c0001t0002g0123others(11): Show | 14 | 234 | 0.0598 | 0 | c.481 others(6): Show |
COL4A6 | ENSG00000197565.17 | transcript | ENST00000334504.12 | protein_coding | 44/44 | chrX | TogoVar | ||||||
COL4A6_chrX_108150614_108443422 | 108172536 | C | T | splice_region_variant others(1): Show |
LOW | HG00733.hp1 | a0002 | a0002c0002 | a0002c0002t0002 | a0002c0002t0002g0226 | 1 | 234 | 0.0043 | 0 | c.313 others(6): Show |
COL4A6 | ENSG00000197565.17 | transcript | ENST00000334504.12 | protein_coding | 31/44 | chrX | TogoVar | ||||||
COL4A6_chrX_108150614_108443422 | 108179444 | C | A | splice_region_variant others(1): Show |
LOW | HG02622.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0202 | 1 | 234 | 0.0043 | 0 | c.213 others(6): Show |
COL4A6 | ENSG00000197565.17 | transcript | ENST00000334504.12 | protein_coding | 25/44 | chrX | TogoVar | ||||||
COL4A6_chrX_108150614_108443422 | 108196503 | G | A | splice_region_variant others(1): Show |
LOW | HG02071.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0136 | 1 | 234 | 0.0043 | 0 | c.903 others(5): Show |
COL4A6 | ENSG00000197565.17 | transcript | ENST00000334504.12 | protein_coding | 14/44 | chrX | TogoVar | ||||||
COL4A6_chrX_108150614_108443422 | 108205701 | T | G | splice_region_variant others(1): Show |
LOW | HG03491.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0043 | 1 | 234 | 0.0043 | 0 | c.610 others(5): Show |
COL4A6 | ENSG00000197565.17 | transcript | ENST00000334504.12 | protein_coding | 9/44 | chrX | TogoVar | ||||||
COL4A6_chrX_108150614_108443422 | 108219699 | G | A | missense_variant others(1): Show |
MODERATE | HG02486.hp1 HG03654.hp1 |
a0007a0008 | a0007c0026a0008c0025 | a0007c0026t0002a0008c0025t0001 | a0007c0026t0002g0192a0008c0025t0001g0161 | 2 | 234 | 0.0086 | 0 | c.323 others(3): Show |
p.Pro others(6): Show |
COL4A6 | ENSG00000197565.17 | transcript | ENST00000334504.12 | protein_coding | 5/45 | 549/6685 | 323/5073 | 108/1690 | chrX | TogoVar | ||
COL5A1_chr9_134636803_134849843 | 134732063 | A | G | splice_region_variant others(1): Show |
LOW | HG02965.hp2 | a0001 | a0001c0003 | a0001c0003t0004 | a0001c0003t0004g0262 | 1 | 272 | 0.0037 | 0 | c.133 others(6): Show |
COL5A1 | ENSG00000130635.17 | transcript | ENST00000371817.8 | protein_coding | 8/65 | chr9 | TogoVar | ||||||
COL5A1_chr9_134636803_134849843 | 134738515 | G | A | splice_region_variant others(1): Show |
LOW | HG01071.hp2 HG01081.hp1 HG01106.hp2 others(20): Show |
a0001a0006a0011 | a0001c0006a0001c0009a0001c0018others(8): Show | a0001c0006t0001a0001c0006t0004a0001c0006t0007others(17): Show | a0001c0006t0001g0108a0001c0006t0004g0011a0001c0006t0004g0184others(20): Show | 23 | 272 | 0.0846 | 0 | c.143 others(4): Show |
p.Ala others(6): Show |
COL5A1 | ENSG00000130635.17 | transcript | ENST00000371817.8 | protein_coding | 10/66 | 1816/8442 | 1431/5517 | 477/1838 | chr9 | TogoVar | ||
COL5A1_chr9_134636803_134849843 | 134738741 | T | C | splice_region_variant others(1): Show |
LOW | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(170): Show |
a0001a0002a0003others(8): Show | a0001c0001a0001c0003a0001c0004others(45): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(117): Show | a0001c0001t0001g0012a0001c0001t0001g0033a0001c0001t0001g0041others(169): Show | 173 | 272 | 0.6360 | 0 | c.143 others(6): Show |
COL5A1 | ENSG00000130635.17 | transcript | ENST00000371817.8 | protein_coding | 10/65 | chr9 | TogoVar |