regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
COL5A1_chr9_134636803_134849843 | 134758304 | T | G | splice_region_variant others(1): Show |
LOW | HG02451.hp1 HG02486.hp2 HG02622.hp1 others(3): Show |
a0001 | a0001c0003a0001c0005a0001c0007others(1): Show | a0001c0003t0014a0001c0005t0003a0001c0005t0006others(3): Show | a0001c0003t0014g0247a0001c0005t0003g0265a0001c0005t0006g0040others(3): Show | 6 | 272 | 0.0221 | 0 | c.193 others(6): Show |
COL5A1 | ENSG00000130635.17 | transcript | ENST00000371817.8 | protein_coding | 18/65 | chr9 | TogoVar | ||||||
COL5A1_chr9_134636803_134849843 | 134795319 | T | C | splice_region_variant others(1): Show |
LOW | HG01891.hp1 HG02886.hp2 HG03453.hp2 others(2): Show |
a0001 | a0001c0001a0001c0009a0001c0044 | a0001c0001t0004a0001c0001t0007a0001c0009t0003others(2): Show | a0001c0001t0004g0102a0001c0001t0007g0248a0001c0009t0003g0261others(2): Show | 5 | 272 | 0.0184 | 0 | c.279 others(6): Show |
COL5A1 | ENSG00000130635.17 | transcript | ENST00000371817.8 | protein_coding | 34/65 | chr9 | TogoVar | ||||||
COL5A1_chr9_134636803_134849843 | 134806181 | C | T | splice_region_variant others(1): Show |
LOW | NA20300.hp2 | a0001 | a0001c0005 | a0001c0005t0003 | a0001c0005t0003g0265 | 1 | 272 | 0.0037 | 0 | c.325 others(6): Show |
COL5A1 | ENSG00000130635.17 | transcript | ENST00000371817.8 | protein_coding | 41/65 | chr9 | TogoVar | ||||||
COL5A1_chr9_134636803_134849843 | 134815988 | G | A | splice_region_variant others(1): Show |
LOW | HG00099.hp1 HG00408.hp2 HG00423.hp1 others(36): Show |
a0001a0004a0005others(3): Show | a0001c0004a0001c0010a0001c0015others(12): Show | a0001c0004t0001a0001c0004t0002a0001c0004t0003others(25): Show | a0001c0004t0001g0013a0001c0004t0001g0170a0001c0004t0001g0204others(36): Show | 39 | 272 | 0.1434 | 0 | c.412 others(4): Show |
p.Thr others(7): Show |
COL5A1 | ENSG00000130635.17 | transcript | ENST00000371817.8 | protein_coding | 52/66 | 4507/8442 | 4122/5517 | 1374/1838 | chr9 | TogoVar | ||
COL5A1_chr9_134636803_134849843 | 134817837 | G | A | splice_region_variant others(1): Show |
LOW | HG01071.hp1 NA20129.hp2 |
a0001 | a0001c0004 | a0001c0004t0001a0001c0004t0004 | a0001c0004t0001g0013a0001c0004t0004g0089 | 2 | 272 | 0.0074 | 0 | c.423 others(6): Show |
COL5A1 | ENSG00000130635.17 | transcript | ENST00000371817.8 | protein_coding | 54/65 | chr9 | TogoVar | ||||||
COL5A1_chr9_134636803_134849843 | 134824594 | C | T | splice_region_variant others(1): Show |
LOW | HG02723.hp1 HG02970.hp2 |
a0001 | a0001c0005a0001c0025 | a0001c0005t0022a0001c0025t0015 | a0001c0005t0022g0085a0001c0025t0015g0007 | 2 | 272 | 0.0074 | 0 | c.469 others(6): Show |
COL5A1 | ENSG00000130635.17 | transcript | ENST00000371817.8 | protein_coding | 61/65 | chr9 | TogoVar | ||||||
COL5A1_chr9_134636803_134849843 | 134829969 | T | C | splice_region_variant others(1): Show |
LOW | HG02145.hp1 HG02572.hp1 HG02723.hp1 others(2): Show |
a0001a0012 | a0001c0001a0001c0005a0001c0007others(2): Show | a0001c0001t0009a0001c0005t0022a0001c0007t0017others(2): Show | a0001c0001t0009g0233a0001c0005t0022g0085a0001c0007t0017g0241others(2): Show | 5 | 272 | 0.0184 | 0 | c.506 others(6): Show |
COL5A1 | ENSG00000130635.17 | transcript | ENST00000371817.8 | protein_coding | 63/65 | chr9 | TogoVar | ||||||
COL5A2_chr2_189026898_189184761 | 189052229 | G | A | splice_region_variant others(1): Show |
LOW | HG02895.hp1 HG02897.hp1 HG03195.hp1 others(2): Show |
a0001 | a0001c0002a0001c0012 | a0001c0002t0009a0001c0012t0010 | a0001c0002t0009g0143a0001c0002t0009g0161a0001c0002t0009g0162others(2): Show | 5 | 248 | 0.0202 | 0 | c.271 others(6): Show |
COL5A2 | ENSG00000204262.14 | transcript | ENST00000374866.9 | protein_coding | 40/53 | chr2 | TogoVar | ||||||
COL5A2_chr2_189026898_189184761 | 189053896 | G | A | missense_variant others(1): Show |
MODERATE | HG01192.hp2 HG04199.hp1 NA19065.hp1 |
a0002 | a0002c0006 | a0002c0006t0005a0002c0006t0017 | a0002c0006t0005g0131a0002c0006t0005g0132a0002c0006t0017g0136 | 3 | 248 | 0.0121 | 0 | c.249 others(4): Show |
p.Pro others(6): Show |
COL5A2 | ENSG00000204262.14 | transcript | ENST00000374866.9 | protein_coding | 37/54 | 2655/6829 | 2498/4500 | 833/1499 | chr2 | TogoVar | ||
COL5A2_chr2_189026898_189184761 | 189066723 | C | A | splice_region_variant others(1): Show |
LOW | HG02895.hp1 HG02897.hp1 |
a0001 | a0001c0012 | a0001c0012t0010 | a0001c0012t0010g0040a0001c0012t0010g0126 | 2 | 248 | 0.0081 | 0 | c.145 others(6): Show |
COL5A2 | ENSG00000204262.14 | transcript | ENST00000374866.9 | protein_coding | 22/53 | chr2 | TogoVar | ||||||
COL5A2_chr2_189026898_189184761 | 189068016 | G | A | missense_variant others(1): Show |
MODERATE | HG02717.hp1 HG02965.hp1 |
a0004 | a0004c0013 | a0004c0013t0001 | a0004c0013t0001g0113a0004c0013t0001g0114 | 2 | 248 | 0.0081 | 0 | c.140 others(4): Show |
p.Pro others(6): Show |
COL5A2 | ENSG00000204262.14 | transcript | ENST00000374866.9 | protein_coding | 21/54 | 1557/6829 | 1400/4500 | 467/1499 | chr2 | TogoVar | ||
COL5A2_chr2_189026898_189184761 | 189068227 | G | A | missense_variant others(1): Show |
MODERATE | HG04199.hp2 | a0007 | a0007c0015 | a0007c0015t0001 | a0007c0015t0001g0108 | 1 | 248 | 0.0040 | 0 | c.130 others(4): Show |
p.Thr others(6): Show |
COL5A2 | ENSG00000204262.14 | transcript | ENST00000374866.9 | protein_coding | 20/54 | 1458/6829 | 1301/4500 | 434/1499 | chr2 | TogoVar | ||
COL5A3_chr19_9954561_10015504 | 9962893 | A | G | splice_region_variant others(1): Show |
LOW | HG02559.hp1 HG02630.hp1 HG02965.hp1 others(4): Show |
a0027a0029a0041others(2): Show | a0027c0054a0027c0084a0029c0124others(3): Show | a0027c0054t0013a0027c0084t0012a0029c0124t0001others(3): Show | a0027c0054t0013g0004a0027c0054t0013g0005a0027c0084t0012g0167others(4): Show | 7 | 412 | 0.0170 | 0 | c.478 others(6): Show |
COL5A3 | ENSG00000080573.7 | transcript | ENST00000264828.4 | protein_coding | 64/66 | chr19 | TogoVar | ||||||
COL5A3_chr19_9954561_10015504 | 9966314 | G | C | missense_variant others(1): Show |
MODERATE | HG00408.hp2 HG00423.hp1 HG00423.hp2 others(20): Show |
a0004a0025a0045others(3): Show | a0004c0010a0004c0013a0004c0108others(6): Show | a0004c0010t0001a0004c0010t0004a0004c0010t0023others(10): Show | a0004c0010t0001g0267a0004c0010t0004g0033a0004c0010t0004g0157others(20): Show | 23 | 412 | 0.0558 | 0 | c.478 others(4): Show |
p.Ile others(7): Show |
COL5A3 | ENSG00000080573.7 | transcript | ENST00000264828.4 | protein_coding | 64/67 | 4901/6207 | 4782/5238 | 1594/1745 | chr19 | TogoVar | ||
COL5A3_chr19_9954561_10015504 | 9969393 | CTGGTTCA others(19): Show |
C | splice_acceptor_variant others(3): Show |
HIGH | NA19087.hp1 | a0060 | a0060c0123 | a0060c0123t0001 | a0060c0123t0001g0388 | 1 | 412 | 0.0024 | -26 | c.409 others(38): Show |
p.Gly others(15): Show |
COL5A3 | ENSG00000080573.7 | transcript | ENST00000264828.4 | protein_coding | 57/67 | 4226/6207 | 4099/5238 | 1367/1745 | chr19 | TogoVar | ||
COL5A3_chr19_9954561_10015504 | 9977595 | C | G | missense_variant others(1): Show |
MODERATE | HG00323.hp1 HG00408.hp1 HG00544.hp2 others(149): Show |
a0002a0003a0011others(35): Show | a0002c0002a0002c0020a0002c0034others(60): Show | a0002c0002t0001a0002c0002t0002a0002c0002t0005others(77): Show | a0002c0002t0001g0069a0002c0002t0001g0313a0002c0002t0001g0315others(148): Show | 152 | 412 | 0.3689 | 0 | c.312 others(4): Show |
p.Arg others(7): Show |
COL5A3 | ENSG00000080573.7 | transcript | ENST00000264828.4 | protein_coding | 42/67 | 3244/6207 | 3125/5238 | 1042/1745 | chr19 | TogoVar | ||
COL5A3_chr19_9954561_10015504 | 9978891 | C | T | splice_region_variant others(1): Show |
LOW | HG02074.hp2 | a0001 | a0001c0111 | a0001c0111t0001 | a0001c0111t0001g0324 | 1 | 412 | 0.0024 | 0 | c.296 others(4): Show |
p.Pro others(6): Show |
COL5A3 | ENSG00000080573.7 | transcript | ENST00000264828.4 | protein_coding | 40/67 | 3083/6207 | 2964/5238 | 988/1745 | chr19 | TogoVar | ||
COL5A3_chr19_9954561_10015504 | 9980648 | C | T | splice_region_variant others(1): Show |
LOW | HG02074.hp2 | a0001 | a0001c0111 | a0001c0111t0001 | a0001c0111t0001g0324 | 1 | 412 | 0.0024 | 0 | c.260 others(4): Show |
p.Lys others(6): Show |
COL5A3 | ENSG00000080573.7 | transcript | ENST00000264828.4 | protein_coding | 35/67 | 2723/6207 | 2604/5238 | 868/1745 | chr19 | TogoVar | ||
COL5A3_chr19_9954561_10015504 | 9980858 | C | T | missense_variant others(1): Show |
MODERATE | NA19010.hp2 | a0048 | a0048c0137 | a0048c0137t0002 | a0048c0137t0002g0060 | 1 | 412 | 0.0024 | 0 | c.250 others(4): Show |
p.Gly others(6): Show |
COL5A3 | ENSG00000080573.7 | transcript | ENST00000264828.4 | protein_coding | 34/67 | 2626/6207 | 2507/5238 | 836/1745 | chr19 | TogoVar | ||
COL5A3_chr19_9954561_10015504 | 9992000 | A | G | splice_region_variant others(1): Show |
LOW | HG00408.hp1 HG00408.hp2 HG00423.hp1 others(194): Show |
a0001a0002a0004others(55): Show | a0001c0033a0001c0040a0001c0045others(93): Show | a0001c0033t0002a0001c0033t0011a0001c0040t0005others(113): Show | a0001c0033t0002g0153a0001c0033t0011g0154a0001c0033t0011g0168others(193): Show | 197 | 412 | 0.4782 | 0 | c.189 others(6): Show |
COL5A3 | ENSG00000080573.7 | transcript | ENST00000264828.4 | protein_coding | 22/66 | chr19 | TogoVar | ||||||
COL5A3_chr19_9954561_10015504 | 9993680 | G | A | splice_region_variant others(1): Show |
LOW | HG02145.hp2 HG02451.hp2 HG02970.hp2 others(2): Show |
a0001a0064a0067others(1): Show | a0001c0089a0001c0142a0064c0076others(2): Show | a0001c0089t0001a0001c0142t0001a0064c0076t0007others(2): Show | a0001c0089t0001g0225a0001c0142t0001g0284a0064c0076t0007g0042others(2): Show | 5 | 412 | 0.0121 | 0 | c.164 others(6): Show |
COL5A3 | ENSG00000080573.7 | transcript | ENST00000264828.4 | protein_coding | 17/66 | chr19 | TogoVar | ||||||
COL5A3_chr19_9954561_10015504 | 9996260 | G | C | splice_region_variant others(1): Show |
LOW | HG00408.hp1 HG00558.hp2 HG00597.hp1 others(159): Show |
a0001a0002a0003others(49): Show | a0001c0016a0001c0045a0001c0089others(75): Show | a0001c0016t0001a0001c0016t0002a0001c0045t0001others(91): Show | a0001c0016t0001g0233a0001c0016t0001g0278a0001c0016t0001g0372others(157): Show | 162 | 412 | 0.3932 | 0 | c.142 others(4): Show |
p.Leu others(6): Show |
COL5A3 | ENSG00000080573.7 | transcript | ENST00000264828.4 | protein_coding | 14/67 | 1544/6207 | 1425/5238 | 475/1745 | chr19 | TogoVar | ||
COL5A3_chr19_9954561_10015504 | 9996617 | G | A | missense_variant others(1): Show |
MODERATE | HG03486.hp2 | a0063 | a0063c0134 | a0063c0134t0001 | a0063c0134t0001g0304 | 1 | 412 | 0.0024 | 0 | c.133 others(4): Show |
p.Pro others(6): Show |
COL5A3 | ENSG00000080573.7 | transcript | ENST00000264828.4 | protein_coding | 12/67 | 1455/6207 | 1336/5238 | 446/1745 | chr19 | TogoVar | ||
COL5A3_chr19_9954561_10015504 | 10001670 | T | C | missense_variant others(1): Show |
MODERATE | HG00099.hp2 HG00140.hp1 HG00140.hp2 others(371): Show |
a0001a0002a0003others(65): Show | a0001c0001a0001c0003a0001c0016others(123): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(164): Show | a0001c0001t0001g0075a0001c0001t0001g0079a0001c0001t0001g0085others(368): Show | 374 | 412 | 0.9078 | 0 | c.964 others(3): Show |
p.Arg others(6): Show |
COL5A3 | ENSG00000080573.7 | transcript | ENST00000264828.4 | protein_coding | 8/67 | 1083/6207 | 964/5238 | 322/1745 | chr19 | TogoVar | ||
COL6A1_chr21_45976770_46010048 | 45990826 | C | T | splice_region_variant others(1): Show |
LOW | HG02559.hp2 | a0001 | a0001c0018 | a0001c0018t0001 | a0001c0018t0001g0049 | 1 | 128 | 0.0078 | 0 | c.105 others(4): Show |
p.Asp others(6): Show |
COL6A1 | ENSG00000142156.16 | transcript | ENST00000361866.8 | protein_coding | 14/35 | 1137/4203 | 1056/3087 | 352/1028 | chr21 | TogoVar | ||
COL6A1_chr21_45976770_46010048 | 45992740 | C | T | splice_region_variant others(1): Show |
LOW | HG02559.hp2 HG03195.hp1 |
a0001a0013 | a0001c0018a0013c0020 | a0001c0018t0001a0013c0020t0002 | a0001c0018t0001g0049a0013c0020t0002g0002 | 2 | 128 | 0.0156 | 0 | c.127 others(6): Show |
COL6A1 | ENSG00000142156.16 | transcript | ENST00000361866.8 | protein_coding | 18/34 | chr21 | TogoVar | ||||||
COL6A1_chr21_45976770_46010048 | 45998892 | T | C | splice_region_variant others(1): Show |
LOW | HG03471.hp2 | a0007 | a0007c0036 | a0007c0036t0005 | a0007c0036t0005g0083 | 1 | 128 | 0.0078 | 0 | c.161 others(6): Show |
COL6A1 | ENSG00000142156.16 | transcript | ENST00000361866.8 | protein_coding | 24/34 | chr21 | TogoVar | ||||||
COL6A1_chr21_45976770_46010048 | 46001956 | C | T | splice_region_variant others(1): Show |
LOW | HG00741.hp1 | a0001 | a0001c0003 | a0001c0003t0002 | a0001c0003t0002g0017 | 1 | 128 | 0.0078 | 0 | c.195 others(6): Show |
COL6A1 | ENSG00000142156.16 | transcript | ENST00000361866.8 | protein_coding | 30/34 | chr21 | TogoVar | ||||||
COL6A2_chr21_46093112_46134801 | 46117942 | T | G | splice_region_variant others(1): Show |
LOW | NA20129.hp1 | a0001 | a0001c0005 | a0001c0005t0001 | a0001c0005t0001g0130 | 1 | 372 | 0.0027 | 0 | c.111 others(6): Show |
COL6A2 | ENSG00000142173.17 | transcript | ENST00000397763.6 | protein_coding | 12/27 | chr21 | TogoVar | ||||||
COL6A2_chr21_46093112_46134801 | 46120507 | T | C | splice_region_variant others(1): Show |
LOW | HG00140.hp2 HG00423.hp1 HG00423.hp2 others(107): Show |
a0001a0003a0007 | a0001c0001a0001c0002a0001c0013others(9): Show | a0001c0001t0001a0001c0002t0002a0001c0002t0005others(17): Show | a0001c0001t0001g0173a0001c0001t0001g0188a0001c0002t0002g0001others(89): Show | 110 | 372 | 0.2957 | 0 | c.133 others(6): Show |
COL6A2 | ENSG00000142173.17 | transcript | ENST00000397763.6 | protein_coding | 15/27 | chr21 | TogoVar | ||||||
COL6A2_chr21_46093112_46134801 | 46124924 | G | A | splice_region_variant others(1): Show |
LOW | HG00423.hp1 HG00544.hp2 HG00597.hp2 others(90): Show |
a0001a0003a0007 | a0001c0002a0001c0013a0001c0014others(9): Show | a0001c0002t0002a0001c0002t0005a0001c0002t0010others(14): Show | a0001c0002t0002g0001a0001c0002t0002g0003a0001c0002t0002g0006others(74): Show | 93 | 372 | 0.2500 | 0 | c.177 others(6): Show |
COL6A2 | ENSG00000142173.17 | transcript | ENST00000397763.6 | protein_coding | 23/27 | chr21 | TogoVar | ||||||
COL6A2_chr21_46093112_46134801 | 46129801 | C | T | splice_region_variant | LOW | HG00438.hp2 HG00639.hp1 HG01074.hp1 others(32): Show |
a0001a0002a0003others(1): Show | a0001c0006a0001c0022a0001c0026others(4): Show | a0001c0006t0006a0001c0022t0006a0001c0026t0006others(7): Show | a0001c0006t0006g0239a0001c0006t0006g0248a0001c0006t0006g0249others(31): Show | 35 | 372 | 0.0941 | 0 | c.*31 others(4): Show |
COL6A2 | ENSG00000142173.17 | transcript | ENST00000397763.6 | protein_coding | 28/28 | chr21 | TogoVar | ||||||
COL6A2_chr21_46093112_46137848 | 46117942 | T | G | splice_region_variant others(1): Show |
LOW | NA20129.hp1 | a0001 | a0001c0004 | a0001c0004t0001 | a0001c0004t0001g0131 | 1 | 364 | 0.0028 | 0 | c.111 others(6): Show |
COL6A2 | ENSG00000142173.17 | transcript | ENST00000300527.9 | protein_coding | 12/27 | chr21 | TogoVar | ||||||
COL6A2_chr21_46093112_46137848 | 46120507 | T | C | splice_region_variant others(1): Show |
LOW | HG00140.hp2 HG00423.hp1 HG00423.hp2 others(106): Show |
a0001a0003a0008others(1): Show | a0001c0001a0001c0002a0001c0009others(14): Show | a0001c0001t0001a0001c0002t0001a0001c0002t0002others(21): Show | a0001c0001t0001g0170a0001c0001t0001g0184a0001c0002t0001g0322others(91): Show | 109 | 364 | 0.2995 | 0 | c.133 others(6): Show |
COL6A2 | ENSG00000142173.17 | transcript | ENST00000300527.9 | protein_coding | 15/27 | chr21 | TogoVar | ||||||
COL6A2_chr21_46093112_46137848 | 46124924 | G | A | splice_region_variant others(1): Show |
LOW | HG00423.hp1 HG00544.hp2 HG00597.hp2 others(88): Show |
a0001a0003a0005others(1): Show | a0001c0002a0001c0023a0001c0024others(11): Show | a0001c0002t0001a0001c0002t0002a0001c0002t0008others(18): Show | a0001c0002t0001g0322a0001c0002t0002g0001a0001c0002t0002g0004others(75): Show | 91 | 364 | 0.2500 | 0 | c.177 others(6): Show |
COL6A2 | ENSG00000142173.17 | transcript | ENST00000300527.9 | protein_coding | 23/27 | chr21 | TogoVar | ||||||
COL6A3_chr2_237319018_237419164 | 237360162 | G | A | splice_region_variant others(1): Show |
LOW | HG03486.hp1 | a0021 | a0021c0029 | a0021c0029t0005 | a0021c0029t0005g0168 | 1 | 322 | 0.0031 | 0 | c.621 others(6): Show |
COL6A3 | ENSG00000163359.17 | transcript | ENST00000295550.9 | protein_coding | 16/43 | chr2 | TogoVar | ||||||
COL6A3_chr2_237319018_237419164 | 237361735 | G | A | splice_region_variant others(1): Show |
LOW | HG01255.hp2 HG02735.hp2 HG04115.hp1 |
a0005 | a0005c0012a0005c0090 | a0005c0012t0002a0005c0012t0003a0005c0090t0003 | a0005c0012t0002g0300a0005c0012t0003g0132a0005c0090t0003g0122 | 3 | 322 | 0.0093 | 0 | c.615 others(6): Show |
COL6A3 | ENSG00000163359.17 | transcript | ENST00000295550.9 | protein_coding | 15/43 | chr2 | TogoVar | ||||||
COL6A3_chr2_237319018_237419164 | 237361837 | G | A | splice_region_variant others(1): Show |
LOW | HG03942.hp2 | a0002 | a0002c0001 | a0002c0001t0001 | a0002c0001t0001g0050 | 1 | 322 | 0.0031 | 0 | c.606 others(6): Show |
COL6A3 | ENSG00000163359.17 | transcript | ENST00000295550.9 | protein_coding | 14/43 | chr2 | TogoVar | ||||||
COL6A3_chr2_237319018_237419164 | 237394589 | G | T | missense_variant others(1): Show |
MODERATE | HG02738.hp2 | a0035 | a0035c0047 | a0035c0047t0002 | a0035c0047t0002g0123 | 1 | 322 | 0.0031 | 0 | c.707 others(3): Show |
p.Thr others(6): Show |
COL6A3 | ENSG00000163359.17 | transcript | ENST00000295550.9 | protein_coding | 3/44 | 949/10532 | 707/9534 | 236/3177 | chr2 | TogoVar | ||
COL6A5_chr3_130340672_130489846 | 130373709 | T | C | splice_region_variant others(1): Show |
LOW | HG02109.hp1 HG02257.hp1 HG02258.hp1 others(3): Show |
a0006a0007a0059others(1): Show | a0006c0005a0007c0064a0059c0073others(1): Show | a0006c0005t0003a0007c0064t0006a0059c0073t0003others(1): Show | a0006c0005t0003g0017a0006c0005t0003g0039a0006c0005t0003g0041others(3): Show | 6 | 292 | 0.0206 | 0 | c.67+ others(4): Show |
COL6A5 | ENSG00000172752.16 | transcript | ENST00000373157.9 | protein_coding | 2/40 | chr3 | TogoVar | ||||||
COL6A5_chr3_130340672_130489846 | 130379414 | A | G | splice_region_variant others(1): Show |
LOW | HG02280.hp2 HG02622.hp1 HG02647.hp1 others(1): Show |
a0037a0071a0072 | a0037c0032a0071c0071a0072c0072 | a0037c0032t0001a0037c0032t0005a0071c0071t0001others(1): Show | a0037c0032t0001g0181a0037c0032t0005g0057a0071c0071t0001g0180others(1): Show | 4 | 292 | 0.0137 | 0 | c.668 others(5): Show |
COL6A5 | ENSG00000172752.16 | transcript | ENST00000373157.9 | protein_coding | 3/40 | chr3 | TogoVar | ||||||
COL6A5_chr3_130340672_130489846 | 130385363 | A | G | splice_region_variant others(1): Show |
LOW | HG00140.hp2 HG00408.hp2 HG00544.hp1 others(148): Show |
a0002a0003a0007others(56): Show | a0002c0002a0002c0034a0002c0047others(64): Show | a0002c0002t0001a0002c0002t0002a0002c0034t0001others(78): Show | a0002c0002t0001g0004a0002c0002t0001g0103a0002c0002t0001g0110others(143): Show | 151 | 292 | 0.5171 | 0 | c.186 others(4): Show |
p.Lys others(6): Show |
COL6A5 | ENSG00000172752.16 | transcript | ENST00000373157.9 | protein_coding | 5/41 | 2198/8969 | 1860/7845 | 620/2614 | chr3 | TogoVar | ||
COL6A5_chr3_130340672_130489846 | 130401024 | C | T | splice_region_variant others(1): Show |
LOW | HG02896.hp2 | a0019 | a0019c0017 | a0019c0017t0003 | a0019c0017t0003g0279 | 1 | 292 | 0.0034 | 0 | c.399 others(6): Show |
COL6A5 | ENSG00000172752.16 | transcript | ENST00000373157.9 | protein_coding | 10/40 | chr3 | TogoVar | ||||||
COL6A5_chr3_130340672_130489846 | 130406025 | G | A | splice_region_variant others(1): Show |
LOW | HG03471.hp2 | a0036 | a0036c0030 | a0036c0030t0002 | a0036c0030t0002g0212 | 1 | 292 | 0.0034 | 0 | c.438 others(6): Show |
COL6A5 | ENSG00000172752.16 | transcript | ENST00000373157.9 | protein_coding | 15/40 | chr3 | TogoVar | ||||||
COL6A5_chr3_130340672_130489846 | 130406327 | A | G | splice_region_variant others(1): Show |
LOW | NA19030.hp1 | a0007 | a0007c0064 | a0007c0064t0006 | a0007c0064t0006g0038 | 1 | 292 | 0.0034 | 0 | c.447 others(6): Show |
COL6A5 | ENSG00000172752.16 | transcript | ENST00000373157.9 | protein_coding | 17/40 | chr3 | TogoVar | ||||||
COL6A5_chr3_130340672_130489846 | 130409388 | G | A | splice_region_variant others(1): Show |
LOW | HG00140.hp2 HG01169.hp2 HG01361.hp2 others(4): Show |
a0013a0053 | a0013c0016a0013c0075a0053c0092 | a0013c0016t0001a0013c0016t0010a0013c0075t0016others(1): Show | a0013c0016t0001g0144a0013c0016t0010g0013a0013c0016t0010g0014others(4): Show | 7 | 292 | 0.0240 | 0 | c.454 others(4): Show |
p.Pro others(7): Show |
COL6A5 | ENSG00000172752.16 | transcript | ENST00000373157.9 | protein_coding | 18/41 | 4880/8969 | 4542/7845 | 1514/2614 | chr3 | TogoVar | ||
COL6A5_chr3_130340672_130489846 | 130410003 | C | G | splice_region_variant others(1): Show |
LOW | HG03540.hp1 | a0090 | a0090c0052 | a0090c0052t0003 | a0090c0052t0003g0011 | 1 | 292 | 0.0034 | 0 | c.454 others(6): Show |
COL6A5 | ENSG00000172752.16 | transcript | ENST00000373157.9 | protein_coding | 18/40 | chr3 | TogoVar | ||||||
COL6A5_chr3_130340672_130489846 | 130413180 | CTCCCATG others(873): Show |
C | exon_loss_variant others(4): Show |
HIGH | HG00642.hp2 HG01515.hp1 |
a0027 | a0027c0089a0027c0090 | a0027c0089t0002a0027c0090t0002 | a0027c0089t0002g0200a0027c0090t0002g0280 | 2 | 292 | 0.0069 | -880 | c.466 others(15): Show |
COL6A5 | ENSG00000172752.16 | transcript | ENST00000373157.9 | protein_coding | 21/41 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
COL6A5_chr3_130340672_130489846 | 130415638 | A | G | splice_region_variant others(1): Show |
LOW | HG02683.hp2 | a0003 | a0003c0025 | a0003c0025t0002 | a0003c0025t0002g0257 | 1 | 292 | 0.0034 | 0 | c.476 others(6): Show |
COL6A5 | ENSG00000172752.16 | transcript | ENST00000373157.9 | protein_coding | 22/40 | chr3 | TogoVar | ||||||
COL6A5_chr3_130340672_130489846 | 130431466 | A | C | missense_variant others(1): Show |
MODERATE | HG00140.hp2 HG01169.hp2 HG01361.hp2 others(10): Show |
a0013a0014a0053 | a0013c0016a0013c0075a0014c0013others(1): Show | a0013c0016t0001a0013c0016t0010a0013c0075t0016others(2): Show | a0013c0016t0001g0144a0013c0016t0010g0013a0013c0016t0010g0014others(10): Show | 13 | 292 | 0.0445 | 0 | c.525 others(4): Show |
p.Glu others(7): Show |
COL6A5 | ENSG00000172752.16 | transcript | ENST00000373157.9 | protein_coding | 33/41 | 5588/8969 | 5250/7845 | 1750/2614 | chr3 | TogoVar |